Table 4.
Output Data quality of WGBS.
Sample name | Raw Reads | Clean Reads | Q30(%) | GC Content(%) | BS Conversion Rate(%) |
---|---|---|---|---|---|
NVSm_1 | 120000000 | 116381500 | 89.61 | 24.13 | 99.739 |
NVSm_2 | 120000000 | 116928214 | 90.1 | 23.5 | 99.755 |
NVSm_3 | 120000000 | 116755983 | 89.65 | 23.68 | 99.768 |
AsVSm_1 | 120000000 | 116236185 | 90.96 | 23.78 | 99.729 |
AsVSm_2 | 120000000 | 117169760 | 91.46 | 23.69 | 99.731 |
AsVSm_3 | 120000000 | 117543645 | 91.64 | 23.94 | 99.743 |