Table 5.
Ratio of reads to the reference genome in WGBS.
Samples | Total reads | Mapped reads | Mapping rate(%) | Duplication rate(%) |
---|---|---|---|---|
NVSm_1 | 116381500 | 90533168 | 77.79 | 14.7 |
NVSm_2 | 116928214 | 91964040 | 78.65 | 10 |
NVSm_3 | 116755983 | 91373232 | 78.26 | 10.78 |
AsVSm_1 | 116236185 | 92128800 | 79.26 | 14.39 |
AsVSm_2 | 117169760 | 92610978 | 79.04 | 11.4 |
AsVSm_3 | 117543645 | 94211231 | 80.15 | 17.96 |