FIG 3.

Microbiome metabolome cooccurrence determined by mmvec. (A and B) qPCR (A) and bacterial Shannon diversity (B) results of all samples combined and stratified by the T-shirt phase, respectively. (C) Cutibacterium species distribution by the T-shirt phase. (D) mmvec biplot showing the metabolome, where each sphere is a metabolite feature that is color coded based on the enrichment in the silver phase, and the microbiome, where each arrow represents a microbe. A proximity of both metabolites and microbes is indicative of their cooccurrence. (E) Bile acids cooccur with Anaerococcus spp. Bile acids were generally decreased in the silver phase (dark large spheres). (F) MUFAs tend to cooccur with Corynebacterium spp. MUFAs were all enriched in the silver phase (light large spheres).