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. 2023 Jan 23;8(1):e00921-22. doi: 10.1128/msystems.00921-22

FIG 2.

FIG 2

Phylogenomic inference of publicly available genomes from 39 Halomonas strains and the genomes of BMC7 strain (in red), totaling 40 genomes. The green-shaded area represents the strains that form a monophyletic clade with BMC7. The tree was assembled from the comparison of 1,000 proteins through the codon tree method of the PATRIC platform that selects global protein families (PGFams) as homology groups and analyzes aligned proteins and DNA encoding single-copy genes using the RAxML program. The best protein model found by RAxML to build this tree was LG. Purple dots on the branch length correspond to the bootstrap value of 100. The icons on the right side of the strains represent their isolation sources.