Table 3.
Novel miRNAs predicted from cassava
| Total read count | Mature sequence | Star sequence | Genome Location | Strand | Length of mature miRNA | Length of precursor | AU(%) of precursor | MFE FOR PRECURSOR | |
|---|---|---|---|---|---|---|---|---|---|
| Novel miR1 | 1695 | UUGGACCAGUCUUCAUUCCC | GAAUGUUGGCUGGCUCUAAGC | Chromosome07:1,953,068–1,953,150 | + | 20 | 82 | 53 | -27.79 |
| Novel miR2 | 631 | CGGCGAUGAUGAUGAAUAAGACCUU | GGUUUCAAGCACUUUUGAGCCGCA | Chromosome05:26,503,411–26,503,490 | - | 25 | 79 | 57 | -20.28 |
| Novel miR3 | 208 | CACGGUUGCCUGACAGAC | AGGUCCGUGAGCUGUAGAG | Chromosome09:1,853,122–1,853,193 | + | 18 | 71 | 37 | -32.29 |
| Novel miR4 | 145 | UUAACGGCUAAGGAUUCU | GGUCCGUGAGCUUGUAGAGG | Chromosome09:1,873,855–1,873,896 | + | 18 | 41 | 52 | -10.94 |