Antibodies |
|
Anti-PDGFR alpha |
R&D Systems |
AF-307-SP |
PE anti-human CD140a (PDGFRalpha) |
BioLegend |
323505 |
Anti-SOX10 |
R&D Systems |
AF2864-SP |
Anti-NKX2.2 |
DSHB |
Cat# 74.5A5; RRID:AB_531794
|
Anti-MBP |
Millipore |
Cat# MAB386; RRID:AB_94975
|
Anti-OLIG2 |
Millipore |
Cat# AB9610, RRID:AB_570666
|
Anti-O4 clone 81 |
Millipore |
MAB345 |
Hoechst 33342 |
ThermoFisher Scientific |
H3570 |
Alexa Fluor 488 goat anti-rabbit IgG |
ThermoFisher Scientific |
A-11034 |
Alexa Fluor 488 goat anti-mouse IgM |
ThermoFisher Scientific |
A-21042 |
Alexa Fluor 647 goat anti-rabbit IgG |
ThermoFisher Scientific |
A-21245 |
Alexa Fluor 647 donkey anti-goat IgG |
ThermoFisher Scientific |
A-21447 |
|
Bacterial and virus strains |
|
DH10B |
ThermoFisher Scientific |
C404010 |
|
Chemicals, peptides, and recombinant proteins |
|
mTeSR1 |
Stem Cell Technologies |
5850 |
StemFlex |
ThermoFisher Scientific |
A3349401 |
DMEM/F12 |
ThermoFisher Scientific |
11320082 |
Accutase |
ThermoFisher Scientific |
A11105-01 |
Antibiotic-Antimycotic |
ThermoFisher Scientific |
15240062 |
Growth Factor Reduced BD MatrigelTM Matrix |
BD Biosciences |
354230 |
Blebbistatin |
Sigma |
B0560-1MG |
Opti-MEM™ I Reduced Serum Medium |
ThermoFisher Scientific |
31985088 |
CryoStor® CS10 |
Stem Cell Technologies |
7930 |
CTLC-ABC |
Immunospot |
NC9711917 |
Lipofectamine™ Stem Transfection Reagent |
ThermoFisher Scientific |
STEM00001 |
Puromycin |
ThermoFisher Scientific |
A11138-03 |
N2 supplement |
ThermoFisher Scientific |
17502-048 |
B27 Supplement without vitamin A |
ThermoFisher Scientific |
12587-010 |
SB431542 |
Stem Cell Technologies |
72234 |
LDN193189 |
Stem Cell Technologies |
72147 |
Smoothened agonist |
Sigma |
R2625 |
All-trans retinoic acid |
Millipore |
566660 |
Recombinant human PDGF-AA |
R&D Systems |
221-AA-050 |
Recombinant human IGF-I |
R&D Systems |
291-G1-200 |
Recombinant human HGF |
R&D Systems |
294-HG-025 |
Neurotrophin 3 (NT3) |
Millipore |
GF031 |
cAMP analog |
Sigma |
D0260 |
3,3,5-Triiodo-l-thyronine (T3) |
Sigma |
T2877 |
l-Ascorbic acid |
Sigma |
A4403 |
Insulin solution human |
Sigma |
19278 |
Biotin |
Sigma |
4639 |
Poly-L-ornithine hydrobromide |
Sigma |
3655 |
HEPES (1 M) |
ThermoFisher Scientific |
15630080 |
Laminin |
MilliporeSigma |
L2020-1MG |
|
Critical commercial assays |
|
MycoAlert Mycoplasma Detection kit |
Lonza |
LT07-218 |
hPSC Genetic Analysis Kit |
StemCell Technologies |
7550 |
Nano-Glo® Luciferase Assay System |
Promega |
N1120 |
Neural Tissue Dissociation Kit |
Miltenyi |
130-092-628 |
|
Deposited data |
|
Single cell RNAseq |
This study |
Database: GSE223599
|
Human single cell data |
Chamling et al.,13 Jakel et al.29
|
GEO Database: (GSE118257, GSE104276GSE146373), Bioproject (544731)) |
Human reference genome NCBI build 37, GRCh37 |
Genome Reference Consortium |
http://www.ncbi.nlm.nih.gov/projects/genome/assembly/grc/human/ |
|
Experimental models: Cell lines |
|
Passage 40 hESC (WA09) or H9 NIH HES # 0062 |
WiCell |
RRID:CVCL_9773 |
Passage 26 hESC (RUES1) |
WiCell |
RRID:CVCL_B809 |
PTt-P1-MsNL (the triple reporter) |
This paper |
N/A |
|
Oligonucleotides |
|
Primers for Reporter Cell line (see Table S8) |
This paper |
N/A |
qPCR Primers (see Table S8) |
This paper |
N/A |
|
Recombinant DNA |
|
PX459.V2 |
Addgene |
RRID:Addgene_62988 |
ZeroBlunt TOPO |
ThermoFisher Scientific |
K280020 |
MBP-P2A-secNanoluc |
This paper |
N/A |
PLP1-sfGFP |
This paper |
N/A |
|
Software and algorithms |
|
ImageJ |
Schneider et al.52
|
https://imagej.net/software/fiji/ |
GraphPad Prism, V9 |
GraphPad Software, LLC |
https://www.graphpad.com |
CFX Maestro |
Biorad |
12004128 |
Harmony software 4.9 |
Perkin Elmer |
HH17000010 |
Cellomics CX7 |
ThermoFisher Scientific |
HCSDCX7LEDPRO |
R package |
Wu et al.53
|
ClusterProfiler |