Table 5.
Percentage nucleotide and amino acid sequence’s identity in an alignment between 243 isolate from Apis florea, three genotypes, and other isolates in this study.
| AF01 (AF01T243) |
Sequence Identity (%) | |||
|---|---|---|---|---|
| ES01 (ES01TFS11) |
DWV-A (AJ489744.2) |
DWV-B (AY251269.2) |
DWV-C (CEND01000001.1) |
|
| Nucleotide sequence | ||||
| 3′ UTR | 99.9 | 95.6 | 89.9 | 86.9 |
| 5′ UTR | 99.7 | 94.0 | 82.6 | 82.8 |
| Entire polyprotein | 98.2 | 89.0 | 83.0 | 79.1 |
| Leader protein | 99.5 | 82.0 | 74.8 | 65.2 |
| Capsid protein | 99.8 | 86.9 | 82.6 | 79.3 |
| Helicase | 93.5 | 94.1 | 87.5 | 82.1 |
| 3C + RdRp | 99.9 | 89.2 | 84.5 | 82.0 |
| Amino acid sequence | ||||
| Entire polyprotein | 99.4 | 95.2 | 93.6 | 88.6 |
| Leader protein | 99.5 | 84.4 | 78.7 | 66.8 |
| Capsid protein | 99.9 | 96.0 | 95.4 | 89.7 |
| Helicase | 98.9 | 98.1 | 97.5 | 93.9 |
| 3C + RdRp | 100 | 97.6 | 96.8 | 93.8 |