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. 2023 Feb 10;15(2):494. doi: 10.3390/v15020494

Table 2.

Binding energies from AutoDock Vina.

Vina Score from Ensemble Docking
Structure Vina Score (Kcal/mol)
Replicate (Chain) Min. Max. 3rd Quartile
1 (A) −7.20 −4.80 −5.40
1 (B) −8.10 −5.10 −5.80
2 (A) −7.40 −4.70 −5.20
2 (B) −7.30 −5.20 −5.90
3 (A) −6.70 −4.90 −5.40
3 (B) −8.00 −5.20 −6.00
Average −7.45 −4.98 −5.62
Estimated Binding Free Energy by Vina
PDB ID Vina Score (Kcal/mol)
4N0S −5.102
6YRI −4.273