TABLE 1.
Sequence analysis of the phnA gene region
| Gene or feature | Coding stranda | Coding region (nt) | Protein (aa/Da) | Relatedness to other proteinsb
|
||
|---|---|---|---|---|---|---|
| Protein | Identity (%) | Accession no. | ||||
| orf1 | + | 1368–2585 | 405/41681 | MhpT | 65 | P77589 |
| IR | NA | 2610–2828 | NA | NA | NA | NA |
| phnR | − | 3009–3908 | 299/32827 | GcvA | 29 | P32064 |
| AmpR | 33 | P14145 | ||||
| TrpI | 29 | P34818 | ||||
| phnA | + | 4049–5272 | 407/44237 | |||
| phnB | + | 5369–6655 | 428/47304 | GlpT | 25 | P37948 |
| orf2 | + | 7040–8173 | 377/41291 | PotF | 55 | P31133 |
| orf3 | + | 8489–9118 | 209/23775 | PmsR | 44 | P54154 |
a
In the nucleotide sequence, the strand coding for the PA-hydrolase gene (phnA) is designated the plus (+) strand; phnR is the minus (−) strand. NA, not applicable.
b
Accession numbers relate to the SWISS-PROT database; identity relates to percentage of identical amino acids in alignments.