TABLE 2.
Replicon-associated proteins of pTC-F14 and comparison with pTF-FC2
Protein | Translational initiation sites | pTC-F14
|
pTF-FC2
|
% Amino acid identity | ||||
---|---|---|---|---|---|---|---|---|
No. of amino acids | Molecular mass (Da) | pI | No. of amino acids | Molecular mass (Da) | pI | |||
RepA | UCUGGAAAGGAGAACAGCAUG | 291 | 31,289 | 5.92 | 290 | 31,227 | 6.21 | 81.0 |
RepB | CAGGAGAGGGCACAGGCGAUG | 352 | 40,623 | 9.73 | 352 | 40,111 | 9.77 | 78.4 |
RepC | UACCCAGGGAGGCAAGCCAUG | 303 | 33,712 | 9.28 | 299 | 33,740 | 8.99 | 74.2 |
PasA like | UUUGAGCAGGAGCUAAACAUG | 74 | 8,523 | 4.46 | 74 | 8,453 | 4.71 | 81.1 |
PasB like | AGGAAGUGGAGCGCGAUCUUG | 90 | 10,483 | 10.36 | 90 | 10,307 | 10.4 | 72.2 |
Putative ribosome binding sites are in bold, and start codons are in italics.