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. 2023 Feb 8;15(2):473. doi: 10.3390/v15020473

Table 2.

List of primers, probes, and double-stranded gene blocks (ds-gblock as standard) used in quantitative PCR for quantification of pseudorabies (PRV) ICP0, major capsid protein, and glycoprotein C gene/transcript copies in tissue samples and subsequent normalization based on glyceraldehyde 3-phosphate dehydrogenase (GAPDH) housekeeping gene.

Primer/Probe/ds-Gblock Name Sequence
PRV-ICP0 Forward 5′-atcccgtgctcctggataatctcg-3′
Reverse 5′-tccccgtcttcaactggctttatg-3′
Probe 5′Fam-atgttgtccacgacggcctcgcgga-3′ Tamra
ds-gblock 5′-ggcctcggtcacgcgctggcggttcatcccgtgctcctggataatctcgacg
Atgttgtccacgacggcctcgcggatggggtcgctctcgatgaccgtcgagacct
gcccataaagccagttgaagacggggactctggggcgggcgcgagacccaga-3′
PRV–Major Capsid Protein Forward 5′-ccatccagtttgaggtgcag-3′
Reverse 5′-cgaggcgcttgatcatgtag-3′
Probe 5′Fam-cccgtcgcgcgcgatcatcg-3′ Tamra
ds-gblock 5′-ctcagctacgtggccgagggcaccatccagtttgaggtgcagcagccgatg
atcgcgcgcgacgggccgcacccggccgaccagcccgtgcacaactacatgatca
agc gcctcgatcgccgctccctcaacgccgc-3′
PRV–Glycoprotein C Forward 5′-gtcgtccgcgactactacc-3′
Reverse 5′-tcacgttcaccacggagac-3′
Probe 5′Fam-cgtccgcgaaccagcgcagg-3′ Tamra
ds-gblock 5′-agcccttccgggcggtgtgcgtcgtccgcgactactacccgcggcgcagcgtg
cgcctgcgctggttcgcggacgagcacccggtggacgccgccttcgtgaccaa
cagcaccgtggccgacgagctcgggcgccgcacgcgcgtctccgtggtgaac
gtgacgcgcgcggacgtcccgggc-3′
Swine Glyceraldehyde 3-Phosphate Dehydrogenase (GAPDH) Forward 5′-atgacaacttcggcatcgtg-3′
Reverse 5′-ccatccacagtcttctgggt-3′
Probe 5′Fam-accacagtccatgccatcactgcc-3′ Tamra
ds-gblock 5′-gcacccctggccaaggtcatccatgacaacttcggcatcgtggaaggactca
tgaccacagtccatgccatcactgccacccagaagactgtggatggc
ccctctgggaaacgtggcgt-3′