Table 3.
Estimated selection pressure in the result of RELAX. Regions with significant p-values are listed in the table.
| Type | Gene | Selection | k | p-Value | LR | w1 | w2 | w3 |
|---|---|---|---|---|---|---|---|---|
| Myco hetero trophs |
clpP | Relaxation | 0.39 | 0.022 | 5.27 | 0/0 (78.27%) | 1/1 (4.27%) | 8.02/2.25 (17.47%) |
| ycf2 | Relaxation | 0.45 | 0 | 49.96 | 0.95/0.98 (97.53%) | 164.08/9.95 (2.47%) | - | |
| Regional | rpl2 | Intensification | 4.22 | 0.015 | 5.97 | 0.44/0.03 (20.13%) | 0.58/0.10 (58.93%) | 1.00/1.46 (20.95%) |
| rps15 | Relaxation | 0 | 0.003 | 8.74 | 0.27 (20.26%)/1.00 (2.64%) | 0.30 (77.09%)/1.00 (20.26%) | 32.11 (2.64%)/1.00 (77.09%) | |
| rps12-3’ | Relaxation | 0 | 0.048 | 3.91 | 0.00/0.00 (80.01%) | 0.55/1.00 (15.17%) | 292.30/1.00 (4.82%) | |
| ycf1 | Relaxation | 0.85 | 0.022 | 5.24 | 0.00/0.01 (24.94%) | 1.00/1.00 (72.32%) | 192.01/86.05 (2.74%) |