Table 3. Differential expression mRNAs.
| ID | Symbol | gene type | logFC | p adj | Chr | p value |
|---|---|---|---|---|---|---|
| Up regulation | ||||||
| ENSG00000107984 | DKK1 | pc | 9.760657 | 5.69E−16 | 10 | 5.69E−16 |
| ENSG00000139219 | COL2A1 | pc | 9.207937 | 0.001731 | 12 | 0.001731 |
| ENSG00000285304 | Z83844.3 | pc | 9.121696 | 0.009745 | 22 | 0.009745 |
| ENSG00000043355 | ZIC2 | pc | 8.648202 | 4.32E−15 | 13 | 4.32E−15 |
| ENSG00000206557 | TRIM71 | pc | 7.671976 | 0.01305 | 3 | 0.01305 |
| ENSG00000242265 | PEG10 | pc | 7.480217 | 7.01E−06 | 7 | 7.01E−06 |
| ENSG00000147257 | GPC3 | pc | 7.067548 | 1.53E−19 | X | 1.53E−19 |
| ENSG00000156564 | LRFN2 | pc | 6.828666 | 0.000965 | 6 | 0.000965 |
| ENSG00000112164 | GLP1R | pc | 6.675201 | 0.000107 | 6 | 0.000107 |
| ENSG00000159217 | IGF2BP1 | pc | 6.496931 | 3.18E−09 | 17 | 3.18E−09 |
| Down regulation | ||||||
| ENSG00000156006 | NAT2 | pc | −11.19968226 | 1.36E−20 | 8 | 2.59E−23 |
| ENSG00000263761 | GDF2 | pc | −10.37224844 | 4.83E−22 | 10 | 8.56E−25 |
| ENSG00000140505 | CYP1A2 | pc | −10.28584106 | 2.05E−28 | 15 | 2.49E−31 |
| ENSG00000180745 | CLRN3 | pc | −10.2196129 | 2.06E−16 | 10 | 5.18E−19 |
| ENSG00000019169 | MARCO | pc | −9.718074611 | 1.19E−37 | 2 | 6.50E−41 |
| ENSG00000255974 | CYP2A6 | pc | −9.652187815 | 0.000200358 | 19 | 8.65E−06 |
| ENSG00000182566 | CLEC4G | pc | −9.594142896 | 2.22E−38 | 19 | 1.06E−41 |
| ENSG00000104938 | CLEC4M | pc | −9.558825034 | 6.64E−22 | 19 | 1.22E−24 |
| ENSG00000145824 | CXCL14 | pc | −9.501511504 | 1.13E−32 | 5 | 1.08E−35 |
| ENSG00000264006 | AKR1C8P | pc | −9.432829243 | 9.18E−16 | 10 | 2.69E−18 |
Note:
Top 10 (up- and downregulated) differentially expressed mRNAs in normal tissues and hepatocellular carcinoma tissues.