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. 2023 Feb 13;14:1093288. doi: 10.3389/fmicb.2023.1093288

TABLE 5.

Genomic meta-data of 49 group B streptococcus (GBS) strains from Mayanei Hayeshua Medical Center (MHMC) [24 early-onset disease (EOD) and 25 colonizing strains.

Strain Source ST type Genome size (bp) Mean genome size (bp) SD No. of contigs GC content (%) CDS
117690 EOD 17 1,952,166 2,001,326 33,038.75 47 35.32 2100
135217 EOD 17 1,954,426 39 35.18 1955
101298 EOD 17 1,956,116 41 35.16 1969
106704 EOD 17 1,958,977 42 35.16 1970
123494 EOD 17 1,959,814 46 35.42 2181
M38567 COL 17 1,976,171 41 35.2 1991
112109 EOD 17 1,992,470 43 35.32 2101
139904 EOD 17 1,992,893 43 35.16 1980
M40268 COL 17 1,998,253 41 35.34 1999
127946 EOD 17 1,998,291 42 35.34 2002
M40200 COL 17 1,998,371 41 35.34 2003
127743 EOD 17 1,998,934 43 35.33 2002
139934 EOD 17 1,999,036 41 35.3 2003
118022 EOD 17 2,001,983 42 35.08 2012
118659 EOD 17 2,011,569 38 35.32 2085
M40158 COL 17 2,014,292 43 35.3 2047
M39881 COL 17 2,015,862 38 35.39 2005
M38345 COL 17 2,015,870 45 35.2 2047
M40376 COL 17 2,016,361 38 35.36 2053
129618 EOD 17 2,022,841 44 35.32 2036
134924 EOD 17 2,027,570 47 35.37 2003
M38603 COL 17 2,030,084 38 35.64 2176
121684 EOD 17 2,039,347 52 35.38 2192
M38291 COL 17 2,100,127 38 35.39 2007
125416 EOD 23 1,909,126 2,100,416 62,369.45 29 35.26 1896
112767 EOD 178 2,012,915 43 35.16 1979
W19655 COL 1 2,035,207 20 35.3 2038
M42204 COL 19 2,042,352 55 35.4 2034
M41387 COL 130 2,052,446 38 35.4 2070
M40064 COL 1 2,056,223 18 35.37 2055
M38421 COL 8 2,061,907 34 35.1 2088
M40042 COL 1 2,083,880 19 35.2 2081
M38742 COL 1 2,092,052 10 35.35 2079
111236 EOD 18 2,092,413 43 35.32 2100
M40083 COL 19 2,094,244 53 35.5 2107
M38307 COL 1 2,096,218 19 35.37 2101
136117 EOD 196 2,110,014 30 35.39 2136
137471 EOD 4 2,127,936 30 35.3 2171
96655 EOD 1 2,128,796 15 35.34 2112
M41827 COL 1 2,129,556 17 35.3 2120
M39135 COL 12 2,129,642 40 35.3 2168
M40942 COL 1 2,130,091 17 352 2118
M39081 COL 1 2,130,695 17 35.3 2123
M38914 COL 1 2,131,011 17 35.3 2123
107488 EOD 1 2,134,184 14 35.33 2124
M38346 COL 19 2,154,193 53 35.45 2183
119317 EOD 27 2,182,713 90 35.45 2248
M42210 COL 27 2,194,420 72 35.4 2255
104854 COL 106 2,198,156 79 35.56 2273

Genomic meta-data of 49 GBS isolates from MHMC (24 EOD and 25 colonizing isolates). The data for each isolate was organized and sorted by genome size (from largest to smaller) and includes ST type, number of contigs, guanine-cytosine content (GC) and coding sequence (CDS). colonizing isolates (COL).