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. 2023 Feb 27;22:41. doi: 10.1186/s12934-023-02044-y

Table. 2.

Impact of recombinant pediocin production in C. glutamicum on global gene expression

Locus tag Gene Gene description log2-fold change
Up regulated
pedA Pediocin biosynthesis 12.8
pedD Pediocin biosynthesis 12.8
 CGL_RS05840 PspC-domain containing protein 3.0
 CGL_RS03930 pdxS Pyridoxal 5'-phosphate synthase lyase 0.8
 CGL_RS04960 aroF 3-Deoxy-7-phosphoheptulonate synthase 0.7
Down regulated
 CGL_RS09745 bioY Biotin transporter 1.6
 CGL_RS09750 ABC transporter ATP-binding protein 0.6
 CGL_RS10490 ABC transporter substrate-binding protein 0.6

C. glutamicum CR099 pXMJ19 Ptac pedACDCg was compared with CR099 pXMJ19 expressing the empty plasmid as control. The cultures were sampled after 13 h (Fig. 1). The data comprise genes that found significantly changed in expression (log2-fold change > 1.0). In addition, weakly affected genes are included (1 > log2-fold > 0.6). Data significance was verified by a t test (p < 0.1). n = 3