Table 6.

The performance of BioBERT large cased v1.1 on the test set

Evaluation level	Entity	Precision	Recall	F1
Entity-level	Overall	0.813	0.821	0.817
	EPI	0.938	0.958	0.948
	STAT	0.522	0.444	0.48
	LOC	0.746	0.770	0.758
	DATE	1.0	1.0	1.0
	SEX	0.923	1.0	0.960
	ETHN	0.65	0.813	0.722
Token-level	Overall	0.932	0.831	0.878
	EPI	0.959	0.967	0.963
	STAT	0.900	0.689	0.780
	LOC	0.959	0.843	0.897
	DATE	1.0	1.0	1.0
	SEX	0.923	1.0	0.960
	ETHN	0.696	0.941	0.800