Skip to main content
. 2023 Feb 28;24:38. doi: 10.1186/s13059-023-02882-4

Table 1.

Correction of kinship coefficient for different genome coverage of ancient samples with known first-degree relation. High, medium, and low refer to coverage levels

Sample 1 Sample 2 Marker overlap fraction Relation Expected kinship coeff Uncorrected kinship coeff Corrected kinship coeff
Father high Child high 0.933894 First degree 0.25 0.22883 0.24502
Father high Child low 0.377769 First degree 0.25 0.09179 0.24297
Father medium Child high 0.730011 First degree 0.25 0.17604 0.24114
Father medium Child low 0.296127 First degree 0.25 0.07150 0.24144
Father low Child high 0.511753 First degree 0.25 0.12239 0.23915
Father low Child low 0.207545 First degree 0.25 0.05014 0.24160
Father high Father medium 0.778247 Sample matching 0.5 0.38284 0.49193
Father high Father low 0.545866 Sample matching 0.5 0.27020 0.49499
Father medium Father low 0.427389 Sample matching 0.5 0.20863 0.48814
Child high Child low 0.354511 Sample matching 0.5 0.17286 0.48761
Sample Sample type Coverage Typed marker count (1240k)
Father high Teeth 11.997 1,148,973
Father mid Petrosa 3.057 896,623
Father low Petrosa 1.546 630,405
Child high Petrosa 5.510 1,075,845
Child low Petrosa 0.879 435,005