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. 2023 Feb 27;24:70. doi: 10.1186/s12859-022-05112-z

Table 2.

Parameter setting evaluation

Parameters Performance metrics
a r t Median Median* Correct paths
× × × 3 2 41
× × 4 4 39
× × 4 4 35
× 4 4 34
× × 4 4 41
× 4 4 41
× 4 4 35
4 4 35

‘×’ indicates that the parameter was turned on, while an empty box indicates that it was turned off

Median* is the median without considering the outliers. ‘Correct paths’ reports the number of correct reconstructed paths (from leaf to root) in the tree, that is, when the GED path-based distance was zero