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. 2023 Jan 10;9(1):mgen000910. doi: 10.1099/mgen.0.000910

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© 2023 The Authors

This is an open-access article distributed under the terms of the Creative Commons Attribution License. This article was made open access via a Publish and Read agreement between the Microbiology Society and the corresponding author’s institution.

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Fig. 6. — Assembly accuracy by sequencing modality, assembly strategy and species. Accuracy evaluated on the basis of contig comparisons to Illumina-corrected references using dnadiff, for (a) Indels, and (b) SNPs. NB - SPAdes was only used on Illumina data, and Unicycler hybrid assembly was only performed on R9.4.1+Illumina data. For R10.4, data presented are those from unplexed runs. Dashed black vertical line indicates a threshold of 1 error/100 kb. (a) Indel errors (b) Single nucleotide-level errors.