Table 1.
Genome name |
Source |
No. of contigs |
N50 |
Length (Mb) |
G+C (mol %) |
Reference |
---|---|---|---|---|---|---|
Lentzea genomes |
||||||
L. waywayandensis strain DSM 44232 |
Soil, Waywayanda Lake, USA |
39 |
475 994 |
10.15 |
68.9 |
[83] |
L. alba strain NEAU.D13 |
Soil, Aohan Banner, Chifeng, Mongolia |
42 |
431 430 |
10.21 |
68.7 |
[84] |
L. albidocapillata subsp. violacea strain DSM 44796 |
Soil, gold mine cave in Kongju, Korea |
58 |
331 077 |
8.67 |
69 |
[85] |
L. flaviverrucosa strain CGMCC 4.578 |
Soil, Shanxi Province, China |
34 |
409 948 |
9.47 |
69.2 |
[86] |
L. jiangxiensis strain CGMCC 4.6609 |
Soil, Jiangxi Province, South-East China |
62 |
279 756 |
8.59 |
70.2 |
[53] |
L. albida strain DSM 44437 |
Soil, Jiangxi Province, South-East China |
43 |
352 714 |
9.44 |
70.2 |
[83] |
L. albidocapillata strain DSM 44073 |
Tissue specimen, Germany |
43 |
397 314 |
8.64 |
68.7 |
[87] |
L. flaviverrucosa strain DSM 44664 |
Soil, Shanxi Province, China |
38 |
462 737 |
9.47 |
69.2 |
[86] |
L. terrae strain NEAU-LZS 42 |
Soil, Henan Province, China |
145 |
211 542 |
10.58 |
68.6 |
[88] |
L. albidocapillata strain NRRL B-24057 |
Tissue specimen, Germany |
127 |
330 024 |
8.64 |
68.7 |
[87] |
L. pudingi strain CGMCC 4.7319 |
Limestone, South-West China |
63 |
432 100 |
9.21 |
69.1 |
[89] |
L. kentuckyensis strain NRRL B-24416 |
Equine placenta, USA |
317 |
92 128 |
10.21 |
68.8 |
[90] |
Lentzea sp. strain FXJ1.1311 |
Soil, Tibet, China |
120 |
199 708 |
9.37 |
69.5 |
[68] |
L. guizhouensis strain DHS C013 |
Limestone, Guizhou Province, South-West China |
1 |
9 997 872 |
9.99 |
70 |
[69] |
L. cavernae strain CGMCC 4.7367 |
Limestone, Guizhou Province, South-West China |
43 |
472 751 |
9.74 |
69.6 |
[26] |
L. aerocolonigenes NBRC 13195 |
Soil, Nagasaki City |
61 |
348 916 |
10.69 |
69 |
not found |
L. atacamensis DSM 45479 |
Soil, Atacama Desert, Northern Chile |
38 |
785 641 |
9.31 |
68.9 |
[91] |
L. nigeriaca DSM 45680 |
Soil, Abuja, Nigeria |
42 |
641 913 |
9.33 |
68.4 |
[56] |
L. fradiae CGMCC 4.3506 |
Soil, Wutaishan Mountain, Shanxi Province, China |
47 |
479 571 |
8.51 |
70.5 |
[92] |
L. deserti DSM 45480 |
Soil, Salar de Atacama, Atacama Desert, Chile |
50 |
442 485 |
9.53 |
68.8 |
[91] |
L. xinjiangensis CGMCC 4.3525 |
Soil, Xinjiang, North-West China |
61 |
283 838 |
8.69 |
68.9 |
[93] |
L. flava JCM 3296 |
Soil, Acharya Nagarjuna, India |
190 |
133 734 |
9.72 |
69 |
[94] |
L. aerocolonigenes NRRL B-3298 |
Soil, Nagasaki City, Japan |
204 |
163 428 |
10.65 |
69 |
[95] |
Lentzea sp. CC55 * |
Sediment, Cuatro Cienegas, Coahuila, México |
101 |
145 251 |
8.27 |
70.5 |
This study |
Actinokineospora genomes |
||||||
A. enzanensis strain DSM 44649 |
Forest soil, Yamanashi, Japan |
95 |
161 170 |
8.12 |
70.8 |
[65] |
A. xionganensis HBU206404 |
Xiongan lakeside soil, China |
70 |
325 226 |
6.81 |
69.6 |
[58] |
A. terrae strain DSM 44260 |
Soil, Yamanashi Prefecture, Japan |
41 |
383 933 |
7.59 |
71 |
[66] |
A. bangkokensis strain DSM 44EHW |
Rhizospheric soil, Bangkok, Thailand |
78 |
168 142 |
7.45 |
74 |
[96] |
A. mzabensis strain CECT 8578 |
Soil, Saharan desert, South Algeria |
32 |
442 119 |
7.55 |
72.8 |
[60] |
A. auranticolor strain YU 961–1 |
Soil, Yamanashi and Nagano Prefectures, Japan |
61 |
339 969 |
8.43 |
71.8 |
[65] |
A. inagensis strain DSM 44258 |
Fallen leaves, Lake Inaga, Yamanashi, Japan |
120 |
109 727 |
7.28 |
70.2 |
Not found |
A. spheciospongiae strain EG49 |
Marine sponge, Germany |
263 |
52 481 |
7.53 |
72.8 |
[54] |
A. cianjurensis strain DSM 45657 |
Leaf-litter, Indonesia |
19 |
1 225 445 |
7.62 |
70.9 |
[97] |
Root from Peganum harmala, China |
137 |
104 380 |
6.44 |
72.6 |
[59] |
|
A. fastidiosa strain JCM 3276 |
Soil, Egypt |
30 |
1 778 554 |
7.04 |
72.5 |
[98] |
A. alba DSM 45114 |
Soil, Xinjiang Province, China |
1 |
7 288 615 |
7.29 |
69.7 |
[62] |
A. baliensis DSM 45656 |
Soil and plant-litter, Indonesia |
1 |
7 681 387 |
7.68 |
70.6 |
[97] |
A. iranica IBRC-M 10403 |
Soil, Inche-Broun hypersaline wetland, North Iran |
44 |
291 113 |
6.58 |
70.8 |
[70] |
A. alba CPCC 201030 |
Soil, Xinjiang Province, China |
35 |
459 069 |
7.27 |
69.7 |
[62] |
A. alba IBRC-M 10655 |
Soil, Xinjiang Province, China |
34 |
443 362 |
7.27 |
69.7 |
[62] |
Actinokineospora sp. PR83* |
Sediment, Cuatro Cienegas, Coahuila, México |
182 |
77 654 |
7.64 |
72.7 |
This study |