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. 1999 Sep;65(9):4118–4125. doi: 10.1128/aem.65.9.4118-4125.1999

TABLE 2.

Human virus primer sets and probe sequences

Virus Primer and probe sequences Amplicon and target
Panenterovirus Upstream, 5′-CCTCCGGCCCTGAATG-3′ 197-bp highly conserved 5′ untranslated region
Downstream, 5′-ACCGGATGGCCAATC-3′
Probe, 5′-TACTTTGGGTGTCCGTGTTTC-3′
Hepatitis A virus Upstream, 5′-CAGCACATCAGAAAGGTGAG-3′ 192-bp VP1 and VP2 capsid protein interphase
Downstream, 5′-CTCCAGAATCATCTCCAAC-3′
Probe, 5′-TGCTCCTCTTTATCATGCTATG-3′
Norwalk Upstream, 5′-CAAATTATGACAGAATCCTTC-3′ 260-bp viral polymerase
Downstream, 5′-GAGAAATATGACATGGATTGC-3′
Probe, 5′-ATGTCATCAGGGTCAAAGAGG-3′
SRSV (Ando) Upstream, 5′-TGTCACGATCTCATCATCACC-3′ 123-bp RNA polymerase region
Downstream, 5′-TGGAATTCCATCGCCCACTGG-3′
Probes, 5′-ATGTCAGGGGACAGGTTTGT-3′, 5′-ATGTCGGGGCCTAGTCCTGT-3′, 5′-ACATCGGGTGATAGGCCTGT-3′