Table 1. Genome data for Malus sylvestris, drMalSylv7.2.
| Project accession data | |
|---|---|
| Assembly identifier | drMalSylv7.2 |
| Species | Malus sylvestris |
| Specimen | drMalSylv7 (genome
assembly, Hi-C) |
| NCBI taxonomy ID | 3752 |
| BioProject | PRJEB47316 |
| BioSample ID | SAMEA9197672 |
| Isolate information | Leaf tissue |
| Raw data accessions | |
| PacificBiosciences SEQUEL II | ERR6808038, ERR6808039 |
| 10X Genomics Illumina | ERR6688721-ERR6688723;
ERR6688403 |
| Hi-C Illumina | ERR6688724 |
| Standard Illumina libraries | ERR6909395-ERR6909404 |
| Genome assembly | |
| Assembly accession | GCA_916048215.2 |
| Accession of alternate haplotype | GCA_916049865.1 |
| Span (Mb) | 641 |
| Number of contigs | 133 |
| Contig N50 length (Mb) | 8.3 |
| Number of scaffolds | 32 |
| Scaffold N50 length (Mb) | 36.9 |
| Longest scaffold (Mb) | 54.9 |
| BUSCO * genome score | C:98.5%[S:59.4%,D:39.1%],
F:0.6%,M:0.9%,n:2,326 |
*BUSCO scores based on the eudicots_odb10 BUSCO set using v5.3.2. C = complete [S = single copy, D = duplicated], F = fragmented, M = missing, n = number of orthologues in comparison. A full set of BUSCO scores is available at https://blobtoolkit.genomehubs.org/view/drMalSylv7.1/dataset/CAJZHM01/busco.