Table 1.

Overview of StarmapVis input file.

File (s)	Details	Interpretation
Cell info (.csv)	x,y,z and labels	3D coordinate points, cell labels (clusters, gene makers, pseudotime)
Trajectory (.csv)	name, x, y, z, children, and root	Names and 3D coordinates of edges and links
Animation path info (.csv)	edge list	Coordinates of animation path
Histology images (.png)	images	Histology data
Transformed coordinates (.csv)	alternative coordinates	Animate transformation from 2D to 3D, including 3D spatial transcriptomic data and 3D UMAP