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. 2023 Mar;75(2):263–308. doi: 10.1124/pharmrev.122.000654

Fig. 11.

Fig. 11

Inclusion complex of CLR01 and Zn2+. P atoms are indicated in tan, O in red, C in cyan, and H in white. The structure of the complex was calculated with the DFTB3-D3H5 method (Řezáč, 2017) implemented in the DFTB+ program (Hourahine et al., 2020) in implicit solvent (Onufriev and Case, 2019). The optimized structure resembles the experimentally determined single-crystal structure of a Cs+ atom with a MT containing one OH group and one O-CH2-CO2- group at the central hydroquinone ring (Klärner et al., 2000). π-cation interactions between four of the five aromatic MT rings and the metal cation, as well as the ionic interactions between Zn2+ and both OP(OH)O2- side chains, lead to the binding of the metal cation inside the MT cavity.