Table 2. Pertinent information for the 22 SCRMshaw predicted CREs that were evaluated in Drosophila melanogaster reporter transgene assays.

predicted CRE (pCRE) Name	Gene Neighborhood	Coordinates	Method	~Score
S2.1	Hr4 intron 3	X:1947150–1947800	imm	19.9
S2.2	Hr4 intron 3	X:1965990–1966710	imm	30.8
S2.3	Hr4 intron 4	X:1975750–1976540	imm	30.9
S2.4	Hr4 intron 6	X:1989990–1990810	imm	29.9
S2.5	Hr4 intron 6	X:1991560–1992580	imm	32.8
S2.6	mgl intron 2	X:9428350–9429020	imm	19.7
S2.7	mgl intron 2	X:9467850–9468580	imm	25.5
S2.8	mgl intron 1	X:9495830–9496730	imm	33.8
S2.9	mmy intron 1	2L:6473220–6473810	imm	17.9
S2.10	tou intron 1	2R:11596760–11597560	imm	26.1
S2.11	tou intron 1	2R:11604520–11605020	imm	16.6
S2.12	sbb intron 1	2R:18306580–18307470	imm	24.6
S2.13	sbb intron 1	2R:18310870–18311370	imm	15.8
S2.14	sbb intron 1	2R:18333120–18333620	imm	16.1
S2.15	pdm3 upstream region	2R:8326770–8327720	imm	30.5
S2.16	ect intron 1	3L:10196740–10197660	imm	27.8
S2.17	vvl–CR45115 intergenic region	3L:6832930–6833560	imm	21.0
S2.18	Gug intron 1	3L:8450420–8450970	imm	17.9
S2.19	trx intron 1	3R:14278540–14279370	imm	30.6
S2.20	trx intron 1	3R:14284920–14285770	imm	25.4
S2.21	corto upstream region	3R:5086870–5087550	imm	19.4
S2.22	corto upstream region	3R:5087760–5088450	imm	27.4

Note: pCREs with bolded font were those found to drive robust EGFP reporter expression in the developing pupal abdomen.