TABLE 1.
Species | Strain | Isolation source | Origin | GenBank accession number | ||||
ITS | CAL | HIS | TEF1 | TUB | ||||
Diaporthe ambigua | CBS 114015 (epitype) | Pyrus communis | South Africa | KC343010 | KC343252 | KC343494 | KC343736 | KC343978 |
CBS 117167 | Aspalathus linearis | South Africa | KC343011 | KC343253 | KC343495 | KC343737 | KC343979 | |
Diaporthe arecae | CBS 161.64 (ex-isotype) | Areca catechu | India | KC343032 | KC343274 | KC343516 | KC343758 | KC344000 |
CBS 535.75 | Citrus sp. | Suriname | KC343033 | KC343275 | KC343517 | KC343759 | KC344001 | |
Diaporthe foeniculacea | CBS 123208 (holotype of D. neotheicola) | Foeniculum vulgare | Portugal | KC343104 | KC343346 | KC343588 | KC343830 | KC344072 |
CBS 123209; Di-C004/4 (ex-type of D. neotheicola) | Foeniculum vulgare | Portugal | KC343105 | KC343347 | KC343589 | KC343831 | KC344073 | |
Diaporthe ganjae | CBS 180.91 = ILLS 43621 (ex-type) | Cannabis sativa | USA | KC343112 | KC343354 | KC343596 | KC343838 | KC344080 |
Diaporthe inconspicua | CBS 133813 (type) | Maytenus ilicifolia | Brazil | KC343123 | KC343365 | KC343607 | KC343849 | KC344091 |
LGMF922 = CPC 20298 | Spondias mombin | Brazil | KC343124 | KC343366 | KC343608 | KC343850 | KC344092 | |
Diaporthe infecunda | CBS 133812 (type) | Schinus terebinthifolius | Brazil | KC343126 | KC343368 | KC343610 | KC343852 | KC344094 |
LGMF918 | Schinus terebinthifolius | Brazil | KC343132 | KC343374 | KC343616 | KC343858 | KC344100 | |
Diaporthe longispora | CBS 194.36 (type of D. strumella var. longispora | Ribes sp. | Canada | KC343135 | KC343377 | KC343619 | KC343861 | KC344103 |
Diaporthe mayteni | CBS 133185 = CPC 20314 (ex-type) | Maytenus ilicifolia | Brazil | KC343139 | KC343381 | KC343623 | KC343865 | KC344107 |
Diaporthe musigena | CBS 129519 (holotype) | Musa sp. | Australia | KC343143 | KC343385 | KC343627 | KC343869 | KC344111 |
Diaporthe pseudophoenicicola | CBS 462.69 (ex-type) | Phoenix dactylifera | Spain | KC343184 | KC343426 | KC343668 | KC343910 | KC344152 |
CBS 176.77 | Mangifera indica | Iraq | KC343183 | KC343425 | KC343667 | KC343909 | KC344151 | |
Diaporthe sclerotioides | CBS 296.67 (type of P. sclerotioides) | Cucumis sativus | Netherlands | KC343193 | KC343435 | KC343677 | KC343919 | KC344161 |
CBS 710.76 | Cucumis sativus | Netherlands | KC343194 | KC343436 | KC343678 | KC343920 | KC344162 | |
Diaporthe atlantica sp. nov | TH2 | Festuca pruinosa | Spain | ON159897 | ON364024 | ON398814 | ON398836 | ON364045 |
TH10 | Festuca pruinosa | Spain | ON159898 | ON364025 | ON398815 | ON398837 | ON364046 | |
TH21 | Festuca pruinosa | Spain | ON159899 | ON364026 | ON398816 | ON398838 | ON364047 | |
TH56 | Festuca pruinosa | Spain | ON159900 | ON364027 | ON398817 | ON398839 | ON364048 | |
TH71 | Festuca pruinosa | Spain | ON159901 | ON364023 | ON398818 | ON398840 | ON364044 | |
TH86 | Festuca pruinosa | Spain | ON159903 | ON364029 | ON398820 | ON398842 | ON364050 | |
TH91 | Festuca pruinosa | Spain | ON159904 | ON364030 | ON398821 | ON398843 | ON364051 | |
TH151 | Festuca pruinosa | Spain | ON159905 | ON364031 | ON398822 | ON398844 | ON364052 | |
TH158 | Festuca pruinosa | Spain | ON159906 | ON364032 | ON398823 | ON398845 | ON364053 | |
EB4 | Festuca pruinosa | Spain | OM944045 | ON018830 | ON018832 | ON018831 | ON018829 | |
EB11 | Festuca pruinosa | Spain | ON159889 | ON364015 | ON398806 | ON398827 | ON364036 | |
EB12 | Festuca pruinosa | Spain | ON159890 | ON364016 | ON398807 | ON398828 | ON364037 | |
CD39 | Festuca pruinosa | Spain | ON159887 | ON364013 | ON398804 | ON398825 | ON364034 | |
CD87 | Festuca pruinosa | Spain | ON159888 | ON364014 | ON398805 | ON398826 | ON364035 | |
SP11 = CECT 21217 (holotype) | Festuca pruinosa | Spain | ON159893 | ON364019 | ON398810 | ON398831 | ON364040 | |
SP45 | Festuca pruinosa | Spain | ON159894 | ON364020 | ON398811 | ON398832 | ON364041 | |
SP130 | Festuca pruinosa | Spain | ON159895 | ON364021 | ON398812 | ON398833 | ON364042 | |
SP131 | Festuca pruinosa | Spain | ON159896 | ON364022 | ON398813 | ON398834 | ON364043 | |
Diaporthe iberica sp. nov | S32 | Festuca pruinosa | Spain | ON159892 | ON364018 | ON398809 | ON398830 | ON364039 |
T6 | Celtica gigantea | Spain | MT645115 | ON364033 | ON398824 | ON398835 | ON364054 | |
TH77 = CECT 21218 (holotype) | Festuca pruinosa | Spain | ON159902 | ON364028 | ON398819 | ON398841 | ON364049 | |
Diaporthe sp.1 | EB73 = CECT 21219 | Festuca pruinosa | Spain | ON159891 | ON364017 | ON398808 | ON398829 | ON364038 |
Diaporthella corylina | CBS 121124 = AR 4131 | Corylus sp. | China | KC343004 | KC343246 | KC343488 | KC343730 | KC343972 |
Type cultures are indicated in bold. CBS, CBS FUNGAL Biodiversity Centre, Utrecht, The Netherlands; CECT, Spanish type culture collection; CPC, Collection Pedro Crous, housed at CBS; ILLS, Illinois Natural History Survey Fungarium; LGMF, Culture collection of Laboratory of Genetics of Microorganisms, Federal University of Parana, Curitiba, Brazil; TUB, partial beta-tubulin gene; CAL, partial calmodulin gene; HIS, partial histone H3 gene; ITS, ITS1-5.8S rDNA-ITS2 internal transcribed spacer region; TEF1, partial translation elongation factor 1-alpha gene. Isolates marked with bold are ex-type or ex-epitype strains.