Antibodies |
Anti-MYSM1 antibody |
Abcam |
ab-221725 |
RPS24 Polyclonal antibody |
ProteinTech |
14831-1-AP |
RPS7 Polyclonal antibody |
ProteinTech |
14491-1-AP |
Ferroptosis Antibody Sampler Kit |
Cell signaling Technology |
29650 |
Brilliant Violet 421™ anti-human CD34 Antibody |
BD Biosciences |
562577 |
PE Mouse Anti-Human CD66b |
BD biosciences |
561650 |
PE Mouse Anti-Human CD33 |
BD biosciences |
555450 |
PE Mouse Anti-Human CD19 |
BD biosciences |
555413 |
RPL15 Polyclonal antibody |
Proteintech |
16086-1-AP |
RPL23 Polyclonal antibody |
Proteintech |
10727-1-AP |
Ferritin light chain Polyclonal antibody |
Proteintech |
10727-1-AP |
anti-CD90-PECy7 |
BD biosciences |
561558 |
APC-H7 Mouse Anti-Human CD45RA |
BD biosciences |
560674 |
Necroptosis Antibody Sampler Kit |
Cell signaling Technology |
98110T |
Apoptosis Antibody Sampler Kit |
Cell signaling Technology |
9915T |
hnRNP-E1 Polyclonal antibody |
proteintech |
14523-1-AP |
PCBP2 Polyclonal antibody |
proteintech |
15070-1-AP |
SLC40A1/FPN1 Polyclonal antibody |
proteintech |
26601-1-AP |
GCLM Polyclonal antibody |
proteintech |
14241-1-AP |
GCLC Polyclonal antibody |
proteintech |
12601-1-AP |
FITC Annexin V |
Biolegend |
640906 |
APC anti-human CD49c (integrin α3) Antibody |
Biolegend |
343808 |
ALAS1 Polyclonal antibody |
proteintech |
16200-1-AP |
HSP27 Polyclonal antibody |
proteintech |
18284-1-AP |
RELB Polyclonal antibody |
proteintech |
25027-1-AP |
Ferroportin/SLC40A1 Antibody - BSA Free |
Novus Biologicals |
NBP1-21502SS |
BB700 Mouse Anti-Human CD133 |
BD biosciences |
747638 |
rat anti-human anti-EPCR-PE |
Biolegend |
351904 |
PE anti-human CD34 Antibody |
Biolegend |
343506 |
PE anti-human CD3 Antibody |
Biolegend |
317308 |
PE anti-human CD11b Antibody |
Biolegend |
301306 |
Monoclonal ANTI-FLAG® M2 antibody produced in mouse |
Sigma Aldrich |
F1804 |
Chemicals, peptides, and recombinant proteins |
Holo-transferrin Human |
Sigma Aldrich |
T0665 |
Hygromycin B |
Gibco |
10687010 |
Erastin |
Selleck |
S7242 |
FIN56 |
Selleck |
S8254 |
FINO2 |
Cayman Chemical |
25096 |
Deferoxamine mesylate |
Selleck |
S5742 |
Ferrostatin-1 |
Selleck |
S7243 |
BODIPY™ 581/591 C11 |
Invitrogen |
D3861 |
CellROX™ Green Reagent |
Invitrogen |
C10444 |
MitoTEMPO (hydrate) |
Cayman Chemical |
16621 |
N-acetyl-L-Cysteine |
Cayman Chemical |
20261 |
(±)-α-Tocopherol Acetate |
Cayman Chemical |
28399 |
Polyethylenimine, Linear, MW 25000, Transfection Grade (PEI 25K™) |
PolySciences |
23966-100 |
Ambion™ RNase I, cloned, 100 U/μ |
Invitrogen |
AM2294 |
GlycoBlue™ Coprecipitant (15 mg/mL) |
Invitrogen |
AM9515 |
Cycloheximide |
Sigma Aldrich |
C7698 |
Ultra Low Range DNA Ladder |
Invitrogen |
10597012 |
SYBR™ Gold Nucleic Acid Gel Stain (10,000X Concentrate in DMSO) |
Invitrogen |
S11494 |
RSL3 |
Selleck |
S8155 |
CC100 |
StemCell Technologies |
2690 |
BioTracker Far-red Labile Fe2+ Dye |
Millipore Sigma |
SCT037 |
SM-164 1mg |
Cell Signaling Technology |
56003S |
Z-VAD-FMK |
Selleck |
S7023 |
Recombinant Human TNF-α 10ug |
Peprotech |
300-01A |
Mitomycin C 10mg |
Selleck |
S8146 |
Iron(II) sulfate heptahydrate |
F7002-250G |
Sigma Aldrich |
Liproxstatin-1 |
Cayman Chemical |
17730 |
Staurosporine |
Cayman chemical |
81590 |
Methanol |
Sigma Aldrich |
179337 |
RPMI1640 medium |
Life Technologies |
11875-119 |
Opti-MEM |
Gibco |
31985-062 |
Ficoll-Paque Premium sterile solution |
GE Healthcare |
17-5442-02 |
0.25% Trypsin (1X) |
Gibco |
15050-057 |
Blotting nonfat dry milk |
BioRad |
1706404XTU |
Cas9 protein, recombinant |
IDT |
1081061 |
Penicillin-Streptomycin 10,000u/ml |
Life Technologies |
15140-122 |
Recombinant Human TPO |
Peprotech |
300-18-100UG |
Formamide |
Sigma Aldrich |
F7503 |
TBE Buffer (Tris-borate-EDTA) (10X) |
Thermo Scientific |
B52 |
Annexin-V-Binding Buffer |
Biolegend |
422201 |
L-Glutamine 200mM for cell culture |
GIBCO |
25-030-081 |
SSC (20X), RNase-free |
Invitrogen |
AM9763 |
DMEM High Glucose |
Life Technologies |
11965-118 |
Critical commercial assays |
Glutathione Peroxidase Assay Kit |
Cayman Chemical |
703102 |
Protein Synthesis Assay Kit |
Cayman Chemical |
601100 |
Hemin Colorimetric Assay Kit |
BioVision |
K672 |
Iron Colorimetric Assay Kit |
BioVision |
K390 |
Kapa Library Quantification Kit - Complete Kit (Universal) |
Roche |
7960140001 |
mMESSAGE mMACHINE™ T7 Transcription Kit |
Invitrogen |
AM1344 |
MEGAclear™ Transcription Clean-Up Kit |
Invitrogen |
AM1908 |
Poly(A) Tailing Kit |
Invitrogen |
AM1350 |
Deposited data |
Single cell RNA seq |
This paper |
GSE221170 |
Ribosome Profiling |
This paper |
GSE221170 |
Experimental models: Cell lines |
CD34+ HSPCs |
Fred Hutch |
|
HEK293T |
ATCC |
CRL-3216 |
Experimental models: Organisms/strains |
NBSGW |
JAX Laboratory |
026622 |
Oligonucleotides |
Alt-R® Cas9 Electroporation Enhancer |
IDT |
1075916 |
Universal miRNA Cloning Linker |
New England Biolabs |
S1315S |
qPCR primers and genotyping/editing efficiency testing primers |
Genewiz |
Table S8
|
Chemically synthesized sgRNA |
Synthego |
Table S9
|
Recombinant DNA |
MGC Fully Sequenced Human SLC40A1 cDNA |
Horizon Discovery |
MHS6278-202801506 |
MGC Fully Sequenced Human FTH1 cDNA |
Horizon Discovery |
MHS6278-202755914 |
MGC Fully Sequenced Human ALAS1 cDNA |
Horizon Discovery |
MHS6278-202831218 |
MGC Human HSPB1 Sequence-Verified cDNA |
Horizon Discovery |
MHS6278-202756315 |
MGC Human RELB Sequence-Verified cDNA |
Horizon Discovery |
MHS6278-202801567 |
Software and algorithms |
Graphpad Prism v.9.0.1 |
Graphpad |
RRID:SCR_002798 |
Biorender |
Biorender |
RRID:SCR_018361 |
Flowjo |
Flowjo |
RRID:SCR_008520 |
ImageJ v1.52a |
Wayne Rasband |
RRID:SCR_003070 |
R |
The R Foundation |
|
STAR v2.7.10a |
|
|
Bowtie2 v2.3.3 |
|
|
RiboCode v1.2.15 |
|
|
Cutadapt v4.1 |
|
|
CellRanger v7.0.0 |
10xGenomics |
|
Seurat v4.0.2 |
|
|
Other |
In-Fusion® HD Cloning Plus |
Takara/Clontech |
638909 |
Q5 site directed mutagenesis kit |
New England Biolabs |
E0554S |
iScript™ cDNA Synthesis Kit |
BioRad |
1708891 |
Monarch® DNA Gel Extraction Kit |
New England Biolabs |
T1020L |
iQ™ SYBR® Green Supermix |
BioRad |
1708882 |
P3 Primary Cell 4D Nucelofector X Kit S |
Lonza |
V4XP-3032 |
SuperScript™ III Reverse Transcriptase |
Invitrogen |
18080044 |
Chromium Next GEM Single Cell 3ʹ Kit v3.1, 16 rxns |
10XGenomics |
PN-1000268 |
Chromium Next GEM Chip G Single Cell Kit, 48 rxns |
10XGenomics |
PN-1000120 |
Dual Index Kit TT Set A, 96 rxns |
10XGenomics |
PN-1000215 |
CircLigase™ ssDNA Ligase |
Lucigen |
CL4111K |
T4 RNA Ligase 2, truncated |
New England Biolabs |
M0242L |
StemSpan™ SFEM II |
StemCell Technologies |
09655 |
Fetal Bovine Serum - Premium Select G21162
|
Bio-Techne |
S11550 |
SUPERase•In™ RNase Inhibitor (20 U/μL) |
Invitrogen |
AM2694 |
EasySep Human Cord Blood CD34 Positive Selection Kit II |
StemCell Technologies |
17896 |
Immobilon-P PVDF Membrane |
Millipore Sigma |
IPVH00010 |
SPRIselect |
Beckman Coulter |
B23317 |
Qubit™ 1X dsDNA HS Assay Kit |
ThermoFisher |
Q33231 |
Zero Blunt™ TOPO™ PCR Cloning Kit for Sequencing, without competent cells 25rxn |
Invitrogen |
450031 |