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. Author manuscript; available in PMC: 2023 May 1.
Published in final edited form as: Nat Mach Intell. 2022 Oct 27;4(11):940–952. doi: 10.1038/s42256-022-00545-w

Extended Data Fig. 4. Runtime comparison of methods.

Extended Data Fig. 4

In this figure, we demonstrate the speed of sciPENN relative to other methods. Specifically, we use the Seurat 4 PBMC data as reference (161,746 cells) and the H1N1 data (53,201 cells) as query. Given a fraction f, we train each method using (100 * f)% of the Seurat 4 PBMC data and predict on (100 * f)% of the query data and record how long this process takes. We perform this for various fractions f for each method and plot the results.