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. 2023 Feb 27;46(2):86–98. doi: 10.14348/molcells.2023.0013

Table 2.

Epigenetic changes and associated proteins

Epigenetic modification Associated protein Function Reference
Maintenance DNA methylation DNMT1 Maintain the pattern of DNA methylation (Klein et al., 2011)
De novo DNA methylation DNMT3A, DNMT3B Methylation of unmodified DNA (Spencer et al., 2017)
DNA demethylation TET1, TET2, TET3 Remove methylation (Ponciano-Gómez et al., 2017)
Histone acteylation p300/CBP Transcription activation (Benton et al., 2017)
Histone deacetylation HDACs Transcriptional regulation (Li and Seto, 2016)
H3K4 methylation SET1 Transcription activation (Zaidi et al., 2013)
H3K9 methylation EZH2, G9a/GLP Transcription repression (Iacono et al., 2018)
H3K27 methylation PRC2 Transcription repression (H3K27me1 is associated with transcription activiation) (Huang et al., 2021)
H3K79 methylation DOT1L Transcription activation (Johnson et al., 2009)
RNA methylation METTL3, METTL14, WTAP Installation of m6A on RNA residue (Ma et al., 2017)
YTHDF1/2/3, YTHDC1 Binding with m6A (Paris et al., 2019)
RNA demethylation FTO, ALKBH5 Remove of m6A on RNA residue (Zhang et al., 2016)