Table 2.
Blastn analyses of contigs derived from IL-10 − / − lactoserum showing the top two significant alignments
| Length (BP) | Description | Genomic region | Coverage | Identity | Accession number | |
|---|---|---|---|---|---|---|
| Scaffold 1 | 4740 | Endogenous MMTV Mtv1 | gag/pro/pol env saga | 100% | 97.34% | AF228550.1 |
| Exogenous MMTV HeJ | 100% | 97.22% | AF228551.1 | |||
| Scaffold 2 | 2923 | Endogenous MMTV Mtv1 | gag/pro/pol | 100% | 97.57% | AF228550.1 |
| Exogenous MMTV HeJ | 100% | 97.47% | AF228551.1 | |||
| Scaffold 3 | 4740 | Endogenous MMTV Mtv1 | gag/pro/pol env | 100% | 96.52% | AF228550.1 |
| Exogenous MMTV HeJ | 100% | 96.39% | AF228551.1 | |||
| Scaffold 4 | 3591 | Exogenous MMTV HeJ | env saga | 97% | 96.82% | AF228551.1 |
| Endogenous MMTV Mtv1 | 97% | 96.82% | AF228550.1 | |||
| Scaffold 5 | 2999 | Endogenous MMTV Mtv1 | pro/pol env | 100% | 97.60% | AF228550.1 |
| Exogenous MMTV HeJ | 100% | 97.50% | AF228551.1 | |||
| Scaffold 6 | 907 | MMTV LTR DNA | sag LTRb | 100% | 95.49% | L37517.1 |
| Endogenous MMTV Mtv1 | 100% | 95.38% | AF228550.1 | |||
| Scaffold 7 | 1041 | MMTV LTR DNA | sag LTRb | 100% | 95.78% | L37517.1 |
| Endogenous MMTV Mtv1 | 100% | 95.69% | AF228550.1 | |||
| Scaffold 8 | 907 | MMTV LTR DNA | sag LTRb | 100% | 95.93% | L37517.1 |
| Endogenous MMTV Mtv1 | 100% | 95.82% | AF228550.1 | |||
| Scaffold 9 | 569 | MMTV LTR DNA | LTR | 86% | 99.15% | L37517.1 |
| Mtv17 LTR | 86% | 99.15% | AY033511.1 |
Specific Blastn search MMTV sag gene alignment: amtv-17, bmtv-3