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. 2023 Mar 4;6:243. doi: 10.1038/s42003-023-04605-8

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© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 3 — a The average TM-score for template recognition with and without AlphaFold DB at different cut-off ranges. b, c The proportion of the number of templates with ≥30% and 100% sequence identity removed at different TM-score cut-off. PAthreader^# and HHsearch^# represent the results obtained by comparing the identified structure with the native structure through TM-align. d The average TM-score for different template rankings, showing the effect of pDMScore on template recognition.