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. 2023 Mar 3;11:e14949. doi: 10.7717/peerj.14949

Table 1. Characteristic of the included studies.

NO. Authors/Country Sample RNA extraction Study (sample for case and control) Technique miRNAs studied Fold Change\Log Value
1. Zhong et al., 2012, United States pulp tissue miRNeasy Mini kit (Qiagen, Valencia, CA) Healthy Pulp (n = 12); Inflammed Pulp (n = 18) Human miRNA Microarrays 36 were differentially expressed: 3 (miR-150*, miR-584, miR-766) ↑ and 33 ↓. The most significantly repressed expression were miR-664, miR-214, and miR-152. miR-150* fold change: 2.71, miR-584 fold change: 4.54, miR-766 fold change: 2.17
2. Huang et al., 2019, China pulp tissue kit: TRIzol reagent (Invitrogen, Grand Island, NY, USA) Healthy Pulp (n = 10); Inflammed Pulp (n = 10) quantitative reverse transcription–poly- merase chain reaction (qRT-PCR) hsa-miR-223-3p ↑ , hsa-miR-148a ↓, hsa-miR-146a-5p ↓ and hsa-miR-98-3p ↓. hsa-miR-223-3p, hsa-miR-148a , hsa-miR-146a-5p and hsa-miR-98-3p fold change >2.0
3. Lei, Zhang & Xie, 2019, China pulp tissue TRIzol reagent (Thermo Fisher, Waltham, MA, USA). Healthy Pulp (n = 4); Inflammed Pulp (n = 4) quantitative reverse transcription–poly- merase chain reaction (qRT-PCR) miR-455-5p ↓ Fold Change >1.0.
4. Zhang et al., 2019, china pulp tissues, blood and saliva phenol chloroform method Healthy Pulp (n = 16); Inflammed Pulp (n = 28) Reverse transcription-quantitative polymerase chain reaction (RT-qPCR) miR-30b ↓ ND
5. Brodzikowska et al., 2019, Poland pulp tissue RecoverALL Total Nucleic Acid Isolation Kit (Ambion™, Life Technologies, USA). Healthy Pulp (n = 3); Inflammed Pulp (n = 3) quantitative reverse transcription–poly- merase chain reaction (qRT-PCR) miR-410 ↓ miR-410 fold change >4
6. Zhou & Li, 2021 China serum & pulp tissue kit: TRIzol kit (Invitrogen, Carlsbad, CA, USA) Healthy Pulp (n = 34); Inflammed Pulp (n = 66) SYBR Green qRT- PCR miR-27a-3p ↓ ND
7. Liu et al., 2021, China pulp tissue TRIzol Reagent (Thermo Fisher Scientific, Waltham, MA, USA) Healthy Pulp (n = 7); Inflammed Pulp (n = 7) quantitative reverse transcription–poly- merase chain reaction (qRT-PCR) hsa-mir-30a-5p ↓; hsa-miR-128-3p ↓ hsa-miR-128-3p: fold change is–1.47; hsa-miR-30a-5p: fold change is–1.22
8. Chan et al., 2013, United States periapical tissues and periodental tissue miRNeasy Mini kit (Qiagen, Valencia, CA) Apical periodontitis (n = 8); normal periodental tissue (n = 8) quantitative reverse transcription–poly- merase chain reaction (qRT-PCR) miR-95 ↓, miR-181a ↓, miR-181b ↓, miR-181c ↓, miR-455-3p ↓, miR-24-1 ↓ and miR-149 ↓ Log values: miR-95 <−20; miR-181a <−30; miR-181b <−50; miR-181c <−30; miR-455-3p <−20; miR-24-1 <−40; miR-149 <−40
9. Lina et al., 2019, China periapical tissue kit: RNAiso Plus (TaKaRa Bio, Tokyo, Japan) Apical periodontitis (n = 20), normal periodental tissue (n = 13) ABI 7500 real time PCR system with a SYBR® Premix Ex TaqTM II kit (TaKaRa) miR-146a ↑ ND
10. Yue et al., 2016, China periodental tissue Trizol (Life Technologies, Carlsbad, CA) lysis methods Apical periodontitis (n = 10), normal periodental tissue (n = 6) Real-time polymerase chain reaction (PCR) miR-29b ↑, miR-106b ↑, miR-125b ↑, miR-143 ↑, miR-155 ↑, and miR-198 ↑ ND
11. Yue et al., 2017, China periodental tissue Trizol (Life Technologies, Carlsbad, CA) lysis methods Apical periodontitis (n = 10), normal periodental tissue (n = 6) Real-time polymerase chain reaction (PCR) miR-335-5p ↓ ND
12. Shen et al., 2021, United States periapical tissues and periodental tissue TRIzol (Invitrogen, Thermo Fisher Scientific, Waltham, MA) Apical periodontitis (n = 10), normal periodental tissue (n = 2) next-generation miRNA-seq analysis (miRNA-seq) miR-10a-5p ↑, miR-155-5p ↑, miR-7-5p ↑, miR-142-5p ↑, miR-625-3p ↑. miR-891a-5p ↓, miR-514a-3p ↓, miR-128-3p ↓, miR-509-3-5p ↓, miR-199a-5p ↓. Fold change:miR-10a-5p = 8.44; miR-155-5p =: 4.54; miR-7-5p = 3.67; miR-142-5p = 3.64 = miR-625-3p = 3.50; miR-891a-5p = 0.14; ,miR-514a-3p = 0.19; miR-128-3p =: 0.19; miR-509-3-5p = 0.21; miR-199a-5p = 0.22

Notes.

*

activated miR150.

ND
Not determined