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. 2023 Mar 6;14:1250. doi: 10.1038/s41467-023-36899-x

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© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 2 — a Pearson’s correlation of pairwise contacts between HiPore-C and Hi-C (Pairwise contact count > = 50; blue, 500 kb resolution, n = 13,613,408, P = 0; green, 50 kb resolution, n = 12,498,125, P = 0). b Comparison of contact maps between HiPore-C and Hi-C (upper right, HiPore-C; bottom left, Hi-C; 500 kb resolution). c An exemplary region showing compartment comparison between HiPore-C and Hi-C (100 kb resolution, tracks of eigenvector scores, RNA-seq, DNase-Seq, and ChIP-seq of RNA polymerase II (RNAPII), H3K27ac, H3K36me3, and H3K27me3 are shown on the right.). d An exemplary region showing a Pearson’s correlation comparison between HiPore-C and Hi-C (100 kb resolution). e Correlation of eigenvector scores between HiPore-C and Hi-C (100 kb resolution bins, Pearson’s correlation coefficient r = 0.958, n = 27,935, P = 0). f An exemplary region showing a TAD comparison between HiPore-C and Hi-C (10 kb resolution; insulation scores and CTCF track are shown in the middle). g Correlation of insulation scores between HiPore-C and Hi-C (50 kb resolution bins, Pearson’s correlation coefficient r = 0.856, n = 56,244, P = 0). h An exemplary region showing a loop comparison between HiPore-C and Hi-C (10 kb resolution, CTCF track is shown at the top). i Comparison of the aggregate peaks between HiPore-C and Hi-C (10 kb resolution; peaks+/−100 kb).