Skip to main content
. 2023 Mar 7;16:46. doi: 10.1186/s12920-023-01474-2

Table 2.

Genetic analysis results

Case Genomic position Base alteration Amino acid change Exon Domain Pathogenic variant type Parental origin ACMG scoring Score Reported/Not reported
P1 Chr9:130438188 c.1216 C > T p.R406C 14 3b Missense De novo PS1 + PS2 + PS4 + PM2 P [24, 26, 27]
P2 Chr9:130434297 c.664-1G>- - 9 3a Splice De novo PVS1 + PS2 + PM2 P No
P3 Chr9:130430439 c.875G > A p.R292H 10 3a Missense De novo PS1 + PS2 + PS4 + PM2 P [28, 29]
P4 Chr9:130438188 c.1216 C > T p.R406C 14 3b Missense De novo PS1 + PS2 + PS4 + PM2 P [24, 26, 27]
P5 Chr9:130430438 c.874 C > T p.R292C 10 3a Missense Maternal PS1 + PS4 + PM2 + PP1 P [2]
P6 Chr9:130430438 c.874 C > T p.R292C 10 3a Missense Maternal PS1 + PS4 + PM2 + PP1 P [2]
P7 Chr9:130440807 c.1457T > G p.M486R 16 2 Missense De novo PS2 + PM2 LP No
P8 Chr9:130438188 c.1216 C > T p.R406C 14 3b Missense De novo PS1 + PS2 + PS4 + PM2 P [24, 26, 27]
P9 Chr9:130428514 c.733 C > A p.H245N 8 2 Missense De novo PS2 + PM2 + PP2 P No
P10 Chr9:130434396 c.1029 + 1G > T - 12 3a Splice De novo PS1 + PS2 + PM2 P [30]
P11 Chr9:130442466 c.1493_1505del p.H498Pfs*44 17 2 Frameshift De novo PVS1 + PS2 + PM2 LP No
P12 Chr9:130440789 c.1439 C > T p.P480L 17 2 Missense De novo PS1 + PS2 + PS4 + PM2 P [4, 1720]
P13 Chr9:130438188 c.1216 C > T p.R406C 14 3b Missense De novo PS1 + PS2 + PS4 + PM2 P [24, 26, 27]
P14 Chr9:130430411 c.847G > A p.E283K 10 3a Missense Maternal PS1 + PM2 + PP1 P [19]
P15 Chr9:130416028  C.122T > G p.L41R 3 1 Missense De novo PS1 + PS2 + PS4 + PM2 P No
P16 Chr9:130438197 c.1227_1229del p.L410del 14 3b Non frameshift De novo PS2 + PM2 + PM4 LP No
P17 Chr9:130422330 c.268G > C p.D90H 5 1 Missense De novo PS2 + PS4 + PM2 P No
P18 Chr9:130416030 c.128_130del p.S43del 3 1 Non frameshift De novo PS2 + PM2 LP [22]
P19 Chr9:130428484 c.703 C > T p.R235* 10 2 Nonsense De novo PVS1 + PS1 + PM2 P [25]

Abbreviations: P; pathogenic, LP: likely pathogenic.