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. Author manuscript; available in PMC: 2024 Mar 7.
Published in final edited form as: Cell Metab. 2023 Feb 24;35(3):487–503.e7. doi: 10.1016/j.cmet.2023.01.012

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
NRF2 Abcam Cat#: ab62352
KEAP1 Cell Signaling Tech Cat#: 7705
HMOX1 Proteintech Cat#: 10701–1-AP
NQO-1 Cell Signaling Tech Cat#: 3187S
HK2 Cell Signaling Tech Cat#: 2867T
ALDH3A1 Novus Biologicals Cat#: NBP2–15340
FLAG Sigma Cat#: F7425
β-ACTIN Cell Signaling Tech Cat#: 4970
HRP-labeled anti-mouse Cell Signaling Tech Cat#: 7076
HRP-labeled anti-rabbit Cell Signaling Tech Cat#: 7074
Bacterial and Virus Strains
DH5α Fisher Scientific Cat#:18265017
Chemicals, Peptides, and Recombinant Proteins
DMEM Corning Cat#:15–013-CV
RPMI-1640 Corning Cat#: ICN1646454
FBS Corning Cat#: 35–010-CV
GlutaMax Invitrogen Cat#: 35050061
Penicillin-Streptomycin Millipore Cat#: P0781
Blasticidin Fisher Scientific Cat#: 50712728
Puromycin Sigma-Aldrich Cat#: P8833
Sequencing grade modified trypsin Promega Cat#: V5111
DMSO Fisher Scientific Cat#: MT-25950CQC
Urea VWR Intl Cat#: 97063–798
CHAPS hydrate Sigma-Aldrich Cat#: C3023
DTT Fisher Scientific Cat#: BP1725
Protease Inhibitor Cocktail Sigma-Aldrich Cat#: 5892791001
Polybrene Sigma-Aldrich Cat#: TR-1003-G
X-tremegene HP transfection reagent Sigma-Aldrich Cat#: 6366236001
Cell Titer Glo reagent Promega Cat#: 88836
KI696 MedChemExpress Cat#: HY-101140
Bardoxolone-methyl MedChemExpress Cat#: HY-13324
Piericidin A Cayman Cat#: 15379
Rotenone Sigma-Aldrich Cat#: R8875
Phenformin Cayman Cat#: 14997
Atpenin A5 Cayman Cat#: 11898
Antimycin A Cayman Cat#: 19433
Sodium azide Sigma-Aldrich Cat#: S8032
Oligomycin A Cayman Cat#: 11342
IACS-010759 Cayman Cat#: 25867
2-Deoxyglucose Sigma-Aldrich Cat#: D8375
β-Nicotinamide mononucleotide MedChemExpress Cat#: HY-F0004
Sodium oxamate Cayman Cat#: 19057
AZD7545 Cayman Cat#: 19282
Phenylacetaldehyde Sigma Cat#: 107395
4-Hydroxyphenylacetaldehyde This Study N/A
Critical Commercial Assays Cat#: UN3334
Seahorse XFe96 FluxPac Agilent Cat# 102601–100
NAD/NADH-Glo Assay kit Promega Cat#: 103344–100
Deposited data
RNA-seq data This study GEO: GSE221194
Proteomics data This study PRIDE: PXD039027
Recombinant DNA
pLenti:SoNar-NES This study
pCW57.1: FLAG-METAP2 This study N/A
pCW57.1: FLAG-LbNOX This study N/A
pCW57.1: FLAG-NDI-1 This study N/A
pCW57.1: FLAG-PFKP This study N/A
pCW57.1:FLAG-KEAP1-PAM mutant This study N/A
pLENTI-CRISPRv2:sgCTRL This study N/A
pLENTI-CRISPRv2:sgNRF2_9 This Study N/A
pLENTI-CRISPRv2:sgNRF2_10 This Study N/A
pLENTI-CRISPRv2:sgKEAP1_9 This Study N/A
pLENTI-CRISPRv2:sgKEAP1_10 This Study N/A
pLENTI-CRISPRv2:sgALDH3A1_5 This Study N/A
pLENTI-CRISPRv2:sgALDH3A1_7 This Study N/A
pLKO-Tet-On: shGFP 111
pLKO-Tet-On: shKEAP1_1 This Study N/A
Human CRISPR Metabolic Gene Knockout Library 28 110066
Human Activity-Optimized CRISPR Knockout Library 97 1000000100
Software and Algorithms
Prism (v7.0e) GraphPad https://www.graphpad.com/scientific-software/prism/
FlowJo (v10.0.7) Treestar Inc. https://www.flowjo.com/
ImageJ NIH https://imagej.net/software/fiji/
R version (4.0.3) The R Project for Statistical Computing https://www.r-project.org