Antibodies
|
NRF2 |
Abcam |
Cat#: ab62352 |
KEAP1 |
Cell Signaling Tech |
Cat#: 7705 |
HMOX1 |
Proteintech |
Cat#: 10701–1-AP |
NQO-1 |
Cell Signaling Tech |
Cat#: 3187S |
HK2 |
Cell Signaling Tech |
Cat#: 2867T |
ALDH3A1 |
Novus Biologicals |
Cat#: NBP2–15340 |
FLAG |
Sigma |
Cat#: F7425 |
β-ACTIN |
Cell Signaling Tech |
Cat#: 4970 |
HRP-labeled anti-mouse |
Cell Signaling Tech |
Cat#: 7076 |
HRP-labeled anti-rabbit |
Cell Signaling Tech |
Cat#: 7074 |
Bacterial and Virus Strains
|
|
|
DH5α |
Fisher Scientific |
Cat#:18265017 |
Chemicals, Peptides, and Recombinant Proteins
|
|
|
DMEM |
Corning |
Cat#:15–013-CV |
RPMI-1640 |
Corning |
Cat#: ICN1646454 |
FBS |
Corning |
Cat#: 35–010-CV |
GlutaMax |
Invitrogen |
Cat#: 35050061 |
Penicillin-Streptomycin |
Millipore |
Cat#: P0781 |
Blasticidin |
Fisher Scientific |
Cat#: 50712728 |
Puromycin |
Sigma-Aldrich |
Cat#: P8833 |
Sequencing grade modified trypsin |
Promega |
Cat#: V5111 |
DMSO |
Fisher Scientific |
Cat#: MT-25950CQC |
Urea |
VWR Intl |
Cat#: 97063–798 |
CHAPS hydrate |
Sigma-Aldrich |
Cat#: C3023 |
DTT |
Fisher Scientific |
Cat#: BP1725 |
Protease Inhibitor Cocktail |
Sigma-Aldrich |
Cat#: 5892791001 |
Polybrene |
Sigma-Aldrich |
Cat#: TR-1003-G |
X-tremegene HP transfection reagent |
Sigma-Aldrich |
Cat#: 6366236001 |
Cell Titer Glo reagent |
Promega |
Cat#: 88836 |
KI696 |
MedChemExpress |
Cat#: HY-101140 |
Bardoxolone-methyl |
MedChemExpress |
Cat#: HY-13324 |
Piericidin A |
Cayman |
Cat#: 15379 |
Rotenone |
Sigma-Aldrich |
Cat#: R8875 |
Phenformin |
Cayman |
Cat#: 14997 |
Atpenin A5 |
Cayman |
Cat#: 11898 |
Antimycin A |
Cayman |
Cat#: 19433 |
Sodium azide |
Sigma-Aldrich |
Cat#: S8032 |
Oligomycin A |
Cayman |
Cat#: 11342 |
IACS-010759 |
Cayman |
Cat#: 25867 |
2-Deoxyglucose |
Sigma-Aldrich |
Cat#: D8375 |
β-Nicotinamide mononucleotide |
MedChemExpress |
Cat#: HY-F0004 |
Sodium oxamate |
Cayman |
Cat#: 19057 |
AZD7545 |
Cayman |
Cat#: 19282 |
Phenylacetaldehyde |
Sigma |
Cat#: 107395 |
4-Hydroxyphenylacetaldehyde |
This Study |
N/A |
Critical Commercial Assays
|
|
Cat#: UN3334 |
Seahorse XFe96 FluxPac |
Agilent |
Cat# 102601–100 |
NAD/NADH-Glo™ Assay kit |
Promega |
Cat#: 103344–100 |
Deposited data
|
|
|
RNA-seq data |
This study |
GEO: GSE221194
|
Proteomics data |
This study |
PRIDE: PXD039027 |
Recombinant DNA
|
|
|
pLenti:SoNar-NES |
This study |
|
pCW57.1: FLAG-METAP2 |
This study |
N/A |
pCW57.1: FLAG-LbNOX |
This study |
N/A |
pCW57.1: FLAG-NDI-1 |
This study |
N/A |
pCW57.1: FLAG-PFKP |
This study |
N/A |
pCW57.1:FLAG-KEAP1-PAM mutant |
This study |
N/A |
pLENTI-CRISPRv2:sgCTRL |
This study |
N/A |
pLENTI-CRISPRv2:sgNRF2_9 |
This Study |
N/A |
pLENTI-CRISPRv2:sgNRF2_10 |
This Study |
N/A |
pLENTI-CRISPRv2:sgKEAP1_9 |
This Study |
N/A |
pLENTI-CRISPRv2:sgKEAP1_10 |
This Study |
N/A |
pLENTI-CRISPRv2:sgALDH3A1_5 |
This Study |
N/A |
pLENTI-CRISPRv2:sgALDH3A1_7 |
This Study |
N/A |
pLKO-Tet-On: shGFP |
111
|
|
pLKO-Tet-On: shKEAP1_1 |
This Study |
N/A |
Human CRISPR Metabolic Gene Knockout Library |
28
|
110066 |
Human Activity-Optimized CRISPR Knockout Library |
97
|
1000000100 |
Software and Algorithms
|
|
|
Prism (v7.0e) |
GraphPad |
https://www.graphpad.com/scientific-software/prism/
|
FlowJo (v10.0.7) |
Treestar Inc. |
https://www.flowjo.com/
|
ImageJ |
NIH |
https://imagej.net/software/fiji/
|
R version (4.0.3) |
The R Project for Statistical Computing |
https://www.r-project.org
|