AUTHOR,REF,LAT,LONG,FACILITY,CITY,PROVINCE_OR_STATE,COUNTRY,REGION,PUB,START,END,DUR,SITE,POP_1,POP_2,POP_3,SUBPOP,AGE_1,AGE_2,AGE_3,SAMPLE_1,SAMPLE_2,DATA_TYPE_1,DATA_TYPE_2,SELECT_ISOLATES,SPECIES,CARB_RESIST,TOTAL,ERTA_R,DORI_R,IMI_R,MERO_R,CARB_NOS,COL_POLYM_B_RESIST,COL_POLYM_B_R,CARB_DENOM_Y_NO,COL_POLYM_B_DENOM_Y_NO,DIM_1,GES,IMI,IMP_unspecified,IMP_1,KPC_unspecified,KPC_2,KPC_3,NDM_unspecified,NDM_1,NDM_4,NDM_5,NDM_6,NDM_7,OMP,OXA_unspecified,OXA_23,OXA_48,OXA_58,OXA_181,OXA_232,VIM_unspecified,VIM_1,VIM_2,VIM_4,VIM_19,MCR_unspecified,MCR_1,MCR_2,MCR_3,MCR_4,MCR_5,MCR_8,mgrB_mutation,PhoPQ_PmrAB_mut,Database
Aamir et al. 2015,261,30.092017,31.348587,Almaza Hospital,Cairo,Cairo Governorate,Egypt,EMR,2015,2011,2012,12,SINGLE,HC - ACUTE,,,Sepsis,NEONATE,,,BLOOD,,CLIN LAB,,,E. coli,R,5,,,60,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Aamir et al. 2015,261,30.092017,31.348587,Almaza Hospital,Cairo,Cairo Governorate,Egypt,EMR,2015,2011,2012,12,SINGLE,HC - ACUTE,,,Sepsis,NEONATE,,,BLOOD,,CLIN LAB,,,K. pneu,R,4,,,50,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Abayneh et al. 2018,306,7.6739,36.8358,Jimma University Specialized Hospital,Jimma,Oromia Region,Ethiopia,AFR,2018,2016,2016,4,SINGLE,COMM,,,UTI,ADULT,ADOLESCENT,,URINE,,CASE SERIES,,,E. coli,S,63,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Abayneh et al. 2018,306,7.6739,36.8358,Jimma University Specialized Hospital,Jimma,Oromia Region,Ethiopia,AFR,2018,2016,2016,4,SINGLE,COMM,,,UTI,ADULT,ADOLESCENT,,URINE,,CASE SERIES,,,K. pneu,S,11,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Abba et al. 2019,485,7.727904,8.534995,Benue State University Teaching Hospital; Federal Medical Centre; General Hospital; Bishop Murray Medical Centre; Family Support Clinic; Primary Health Care Centre,Makurdi,Benue State,Nigeria,AFR,2019,,,,MULTI,HC - ACUTE,COMM,,,ALL,,,MULTI,,CLIN LAB,,,E. coli,R,400,,,0.5,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Google Scholar
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Abbas et al. 2019,272,30.0444,31.2357,Belquas General Hospital; Mansoura University Hospital,Belqas; Mansoura,Dakahlia Governorate; Mansoura Governorate,Egypt,EMR,2019,2014,2015,12,MULTI,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,,K. pneu,R,150,,,,,10,,,Y,,,,,Y,,,,,,Y,,,,,,,,,,,,Y,,,,,,,,,,,,,,Pubmed
Abbassi et al. 2008_2,773,36.8065,10.1815,Center of Bone Marrow Transplantation of Tunisia,,Tunis Governorate,Tunisia,EMR,2008,1998,2007,106,SINGLE,HC - ACUTE,,,BMT,UNK,,,MULTI,,CLIN LAB,,Enzyme - ESBL+ ,E. coli,S,2,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Abbassi et al. 2008_2,773,36.8065,10.1815,Center of Bone Marrow Transplantation of Tunisia,,Tunis Governorate,Tunisia,EMR,2008,1998,2007,106,SINGLE,HC - ACUTE,,,BMT,UNK,,,MULTI,,CLIN LAB,,Enzyme - ESBL+ ,K. pneu,S,9,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Abd El-latif et al. 2012,240,30.585012,31.487305,Zagazig University Hospital,Zagazig,Sharqia Governorate,Egypt,EMR,2012,2011,2012,9,SINGLE,HC - ACUTE,,,VAP,ADULT,ELDERLY,,ENDOTRACHEAL,,CLIN LAB,,,K. pneu,S,32,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Index Medicus
Abdallah et al. 2015,155,30.5765,31.5041,El-Ahrar General Hospital,Zagazig,Sharqia Governorate,Egypt,EMR,2015,2013,2013,5,SINGLE,HC - ACUTE,,,,UNK,,,BLOOD,,CLIN LAB,,,E. coli,S,55,,,0,0,,,,Y,,,,,N,,N,,,N,,,,,,,,,N,,,,N,,,,,,,,,,,,,,Embase
Abdallah et al. 2015,155,30.5765,31.5041,El-Ahrar General Hospital,Zagazig,Sharqia Governorate,Egypt,EMR,2015,2013,2013,5,SINGLE,HC - ACUTE,,,,UNK,,,BLOOD,,CLIN LAB,,,K. pneu,S,15,,,0,0,,,,N,,,,,N,,N,,,N,,,,,,,,,N,,,,N,,,,,,,,,,,,,,Embase
Abdallah et al. 2017,283,30.5765,31.5041,El-Ahrar General Hospital,Zagazig,Sharqia Governorate,Egypt,EMR,2017,2013,2013,5,SINGLE,COMM,,,,UNK,,,STOOL,,CLIN LAB,,Enzyme - ESBL+ ,K. pneu,R,5,,,,,100,,,N,,,,,N,,N,,,Y,,,,,,,,,N,,,,Y,,,,,,,,,,,,,,Web of Science
Abdelaziz et al. 2012,166,30.0444,31.2357,Unspecified,Cairo,Cairo Governorate,Egypt,EMR,2012,2009,2010,12,SINGLE,HC - ACUTE,,,Cancer - Leukemia,ADULT,,,BLOOD,RESPIRATORY,CASE SERIES,,Drug - Carbapenem - NS/R,K. pneu,R,2,,,100,100,,S,0,N,N,,N,,N,,N,,,,,,,,,,N,,N,,,,N,,,,,,,,,,,,,,Web of Science
Abdelaziz et al. 2013,177,30.025919,31.230546,National Cancer Institute,Cairo,Cairo Governorate,Egypt,EMR,2013,2009,2010,18,SINGLE,HC - ACUTE,,,Cancer,ADULT,CHILD,,MULTI,,CASE SERIES,,Drug - Cefotaxime/Ceftazidime - R,E. coli,R,32,,,3.1,3.1,,,,N,,,N,,N,,N,,,N,,,,,,,N,,Y,,,,Y,Y,,,,,,,,,,,,,Web of Science
Abdelaziz et al. 2013_2,188,30.025919,31.230546,National Cancer Institute,Cairo,Cairo Governorate,Egypt,EMR,2013,2012,2012,1,SINGLE,HC - ACUTE,,,Cancer,ADULT,,,GASTRIC FLUID,BLOOD,CASE SERIES,,Drug - Carbapenem - NS/R,K. pneu,R,2,100,,100,100,,S,0,N,N,,N,,N,,N,,,N,Y,,,,,,N,,N,,,,N,,,,,,,,,,,,,,Embase
Abdelhamid et al. 2016,206,30.913781,30.32421,Damanhour General Hospital,Damanhour,Beheira Governorate,Egypt,EMR,2016,2013,2014,24,SINGLE,HC - ACUTE,,,UTI,UNK,,,URINE,,CLIN LAB,,,E. coli,S,28,,,,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Abdelkader et al. 2017,207,30.0444,31.2357,Abbassia Fever Hospital; Ain Shams University Hospital; Ain Shams Specialized Hospital,Cairo,Cairo Governorate,Egypt,EMR,2017,2013,2015,24,MULTI,HC - ACUTE,,,Meningitis,ALL,,,CSF,,CLIN LAB,,Drug - MDR,E. coli,S,2,,,,0,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Abdelkader et al. 2017,207,30.0444,31.2357,Abbassia Fever Hospital; Ain Shams University Hospital; Ain Shams Specialized Hospital,Cairo,Cairo Governorate,Egypt,EMR,2017,2013,2015,24,MULTI,HC - ACUTE,,,Meningitis,ALL,,,CSF,,CLIN LAB,,Drug - MDR,K. pneu,R,4,,,,75,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Abdel-Moaty et al. 2016,208,30.0444,31.2357,University of Ain Shams Hospital; El-Salam International Hospital; National Cancer Institute; Cairo Lab- Helwan Branch; Shaker Lab - Misr El Gedida Branch,Cairo; Dar el Salam,Cairo Governorate; Sohag Governorate,Egypt,EMR,2016,2012,2012,3,MULTI,HC - ACUTE,COMM,,,UNK,,,MULTI,,CLIN LAB,,,E. coli,S,90,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Abd-Elmonsef et al. 2018,209,30.7865,31.0004,Tanta University Hospital,Tanta,Gharbia Governorate,Egypt,EMR,2018,2015,2016,12,SINGLE,HC - ACUTE,,,Pneumonia,ADULT,,,RESPIRATORY,,CLIN LAB,,,E. coli,S,2,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Abd-Elmonsef et al. 2018,209,30.7865,31.0004,Tanta University Hospital,Tanta,Gharbia Governorate,Egypt,EMR,2018,2015,2016,12,SINGLE,HC - ACUTE,,,Pneumonia,ADULT,,,RESPIRATORY,,CLIN LAB,,,K. pneu,S,6,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Abdelsalam et al. 2018,210,30.023782,31.207219,Cairo University,Cairo,Cairo Governorate,Egypt,EMR,2018,2016,2016,6,SINGLE,HC - ACUTE,,,HAP; VAP,ADULT,,,SPUTUM,,CASE SERIES,,Drug - Carbapenem - R,K. pneu,R,60,,,,,100,R,81.7,N,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Abderrahim et al. 2017,48,36.9265,7.7525,Annaba University Hospital,Annaba,Annaba Province,Algeria,AFR,2017,2013,2014,1,SINGLE,HC - ACUTE,,,GBS,ADULT,,,URINE,,CASE SERIES,,Drug - Carbapenem - NS/R,K. pneu,,2,,,,,,S,0,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Abderrahim et al. 2017,48,36.9264,7.7525,,Annaba,,Algeria,AFR ,2017,2014,2014,1,SINGLE,HC - ACUTE,,,,ADULT,,,URINE,,CASE SERIES,,,K. pneu,R,2,100,,,,,,,N,,,,,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,
Abdoulaye et al. 2018,440,13.5116,2.1254,National Hospital of Niamey,Niamey,Niamey Urban Community,Niger ,AFR,2018,2015,2016,24,SINGLE,HC - ACUTE,,,,ALL,,,WOUND,,CLIN LAB,,,E. coli,S,27,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Abdoulaye et al. 2018,440,13.5116,2.1254,National Hospital of Niamey,Niamey,Niamey Urban Community,Niger ,AFR,2018,2015,2016,24,SINGLE,HC - ACUTE,,,,ALL,,,WOUND,,CLIN LAB,,,E. coli,,21,,,,,,R,19,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Abdoulaye et al. 2018,440,13.5116,2.1254,National Hospital of Niamey,Niamey,Niamey Urban Community,Niger ,AFR,2018,2015,2016,24,SINGLE,HC - ACUTE,,,,ALL,,,WOUND,,CLIN LAB,,,K. pneu,S,9,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Abdoulaye et al. 2018,440,13.5116,2.1254,National Hospital of Niamey,Niamey,Niamey Urban Community,Niger ,AFR,2018,2015,2016,24,SINGLE,HC - ACUTE,,,,ALL,,,WOUND,,CLIN LAB,,,K. pneu,,4,,,,,,R,25,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Abdulall et al. 2018,211,30.0444,31.2357,Dar Al Fouad Hospital,Cairo,Cairo Governorate,Egypt,EMR,2018,2016,2016,12,SINGLE,HC - ACUTE,,,BSI,UNK,,,BLOOD,,CLIN LAB,,,E. coli,R,8,,,,14.3,,S,0,N,N,,,,,,N,,,Y,,,,,,,N,,,,,,,,,,,,,,,,,,,,Pubmed
Abdulall et al. 2018,211,30.0444,31.2357,Dar Al Fouad Hospital,Cairo,Cairo Governorate,Egypt,EMR,2018,2016,2016,12,SINGLE,HC - ACUTE,,,BSI,UNK,,,BLOOD,,CLIN LAB,,,K. pneu,R,27,,,,70.4,,S,0,Y,Y,,,,,,Y,,,Y,,,,,,,N,,,,,,,,,,,,,,,,,,,,Pubmed
Abduo et al. 2016,212,30.0444,31.2357,Unspecified,,,Egypt,EMR,2016,2014,2015,18,MULTI,HC - ACUTE,COMM,,SSI,UNK,,,WOUND,,CASE SERIES,,,E. coli,R,33,,,,,18.2,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Abduo et al. 2016,212,30.0444,31.2357,Unspecified,,,Egypt,EMR,2016,2014,2015,18,MULTI,HC - ACUTE,COMM,,SSI,UNK,,,WOUND,,CASE SERIES,,,K. spp,R,35,,,,,71.4,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Abe et al. 2019,144,5.42436,-4.015859,Abobo-Avocatier Hospital,Abidjan,Abidjan District,Côte d'Ivoire,AFR,2019,2018,2019,7,SINGLE,HC - ACUTE,,,UTI,ADULT,ADOLESCENT,,URINE,,CASE SERIES,,,E. coli,R,14,,,7.1,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Abe et al. 2019,144,5.42436,-4.015859,Abobo-Avocatier Hospital,Abidjan,Abidjan District,Côte d'Ivoire,AFR,2019,2018,2019,7,SINGLE,HC - ACUTE,,,UTI,ADULT,ADOLESCENT,,URINE,,CASE SERIES,,,K. spp,R,8,,,12.5,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Abel-Hady et al. 2008,199,31.044594,31.359624,Mansoura University Children's Hospital,Mansoura,Dakahlia Governorate ,Egypt,EMR,2008,2005,2006,12,SINGLE,HC - ACUTE,,,HAI,NEONATE,,,MULTI,,CASE SERIES,,,K. pneu,S,18,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Abou-Dobara et al. 2010,213,31.0409,31.3785,Mansoura University,Mansoura,Dakahlia Governorate ,Egypt,EMR,2010,,,,SINGLE,HC - ACUTE,,,,UNK,,,URINE,,CLIN LAB,,,E. coli,S,39,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Abou-Dobara et al. 2010,213,31.0409,31.3785,Mansoura University,Mansoura,Dakahlia Governorate ,Egypt,EMR,2010,,,,SINGLE,HC - ACUTE,,,,UNK,,,URINE,,CLIN LAB,,,K. pneu,S,22,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Abubakar et al. 2009,496,9.194928,12.488907,Specialist Hospital,Yola,Adamawa State,Nigeria,AFR,2009,2007,2009,30,SINGLE,HC - ACUTE,COMM,,UTI,UNK,,,URINE,,CLIN LAB,,,E. coli,,568,,,,,,R,65.5,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Google Scholar
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Abubaker et al. 2015,373,32.765616,12.740727,Zawiya Teaching Hospital,Zawiya,Zawiya District,Libya,EMR,2015,2012,2013,8,SINGLE,HC - ACUTE,COMM,,UTI,ALL,,,URINE,,CLIN LAB,,,K. spp,R,69,,,5.8,4.3,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
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Adam et al. 2018,668,15.5007,32.5599,Unspecified,,Khartoum State,Sudan,EMR,2018,2015,2016,24,MULTI,HC - ACUTE,,,,ALL,,,MULTI,,CLIN LAB,,,E. coli,R,71,,,,,36.6,R,,Y,N,,,,Y,,,,,Y,,,,,,,,,,,,,,,,,,,Y,,,,,,,,Pubmed
Adam et al. 2018,668,15.5007,32.5599,Unspecified,,Khartoum State,Sudan,EMR,2018,2015,2016,24,MULTI,HC - ACUTE,,,,ALL,,,MULTI,,CLIN LAB,,,K. pneu,R,50,,,,,58,R,,Y,N,,,,Y,,,,,Y,,,,,,,,,,,,,,,,,,,Y,,,,,,,,Pubmed
Adegoke et al. 2010,507,5.0114,7.861041,University of Uyo Teaching Hospital,Uyo,Akwa Ibom State,Nigeria,AFR,2010,,,,SINGLE,HC - ACUTE,,,SSI,ADULT,,,WOUND,,CLIN LAB,,,E. coli,,12,,,,,,R,20,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Adegoke et al. 2010,507,5.0114,7.861041,University of Uyo Teaching Hospital,Uyo,Akwa Ibom State,Nigeria,AFR,2010,,,,SINGLE,HC - ACUTE,,,SSI,ADULT,,,WOUND,,CLIN LAB,,,K. oxy,,8,,,,,,R,95,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Adegoke et al. 2011,518,5.037246,7.912814,Life Link Medical Laboratory; Our Lady of Lourdes Maternity and Infirmary; Standard Medical Laboratory,Uyo,Akwa Ibom State,Nigeria,AFR,2011,2009,2009,12,MULTI,HC - ACUTE,,,,ADULT,CHILD,,VAGINAL,,CASE SERIES,,,E. coli,,29,,,,,,R,60,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Agabou et al. 2016,49,36.3601,6.6424,,Constantine,,Algeria,AFR,2016,2011,2012,22,MULTI,HC - ACUTE,COMM,,Workers - Animals/Animal Products,ADULT,,,MULTI,,CLIN LAB,SURVEILLANCE,,E. coli,R,164,0.6,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Agabou et al. 2016,49,36.3601,6.6424,Military Hospital of Constantine,Constantine,Constantine Province,Algeria,AFR,2016,2011,2012,22,MULTI,HC - ACUTE,COMM,,Workers - Animals/Animal Products,ADULT,,,MULTI,,CLIN LAB,SURVEILLANCE,,E. coli,,164,,,,,,S,0,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Belbel et al. 2018,50,36.9265,7.7525,Ibn Rochd Hospital ,Annaba,Annaba Province,Algeria,AFR,2018,2017,2017,3,SINGLE,HC - ACUTE,,,,UNK,,,PUS,URINE,OUTBREAK,,Drug - Carbapenem - R,K. pneu,R,8,87.5,,,,,R,25,N,N,,,,N,,N,,,N,,,,,,,,,Y,,,,N,,,,,N,,,,,,,Y,Y,Web of Science
Bentroki et al. 2012,51,36.459,7.4327,,Guelma,,Algeria,AFR,2012,2007,2011,40,SINGLE,COMM,,,,ALL,,,URINE,,CLIN LAB,,,E. coli,S,786,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Bentroki et al. 2012,51,36.459,7.4327,,Guelma,,Algeria,AFR,2012,2007,2011,40,SINGLE,COMM,,,,ALL,,,URINE,,CLIN LAB,,,K. spp,S,160,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Agabou et al. 2014,60,36.3601,6.6424,,Constantine,,Algeria,AFR,2014,2011,2012,21,SINGLE,HC - ACUTE,COMM,,,ALL,,,MULTI,,CLIN LAB,,,E. coli,R,,,,,,,,,N,,,,,,,,,,,,,,,,,,,Y,,,,,,,,,,,,,,,,,,
Berrazeg et al. 2013,52,34.8884,-1.318,,Tlemcen,,Algeria,AFR,2013,2008,2011,30,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,,K. pneu,S,221,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Berrazeg et al. 2013,52,36.73538256,3.087107428,Unspecified,"Tlemcen, Sidi Bel Abbes and Oran Hospitals",Tlemcen Province; Sidi Bel Abbes Province; Oran Province,Algeria,AFR,2013,2008,2011,30,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,,K. pneu,,221,,,,,,S,0,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Berrazeg et al. 2016,53,35.212678,-0.626244,Sidi Belabess University Hospital,Sidi Bel Abbès,Sidi Bel Abbès Province,Algeria,AFR,2016,2011,2011,1,SINGLE,HC - ACUTE,,,Trauma,ADULT,,,URINE,,CASE SERIES,,Drug - Colistin - R,E. coli,,6,,,,,,R,100,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,Y,,,,,,,,Global Health
Adekunle et al. 2019,529,7.78139,4.538584,Onward Hospital; Primary Health Centre Atelewo,Osogbo,Osun State,Nigeria,AFR,2019,2018,2018,7,SINGLE,HC - ACUTE,COMM,,Pregnant; Colonized; UTI,ADULT,,,URINE,,CASE SERIES,,,E. coli,R,10,,,,100,,,,N,,,,,,,,,,,,,,,,,,,,,,,Y,,,,,,,,,,,,,,Google Scholar
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Aggoune et al. 2014,71,36.7537,3.0587,,Algiers,,Algeria,AFR,2014,2011,2011,1,SINGLE,HC - ACUTE,,,,INFANT,CHILD,,BLOOD,,CLIN LAB,,Drug - MDR,K. pneu,R,1,100,,100,,,,,N,,,,,,,,,,,,,,,,,,,Y,,,,,,,,,,,,,,,,,,
Cuzon et al. 2015,55,36.3601,6.6424,,Constantine,,Algeria,AFR,2015,2014,2014,3,SINGLE,HC - ACUTE,,,,ALL,,,MULTI,,OUTBREAK,,,K. pneu,R,3,100,,100,100,,,,N,,,,,,,,,,,,,,,,,,,Y,,,,,,,,,,,,,,,,,,
Cuzon et al. 2015,55,36.3601,6.6424,Regional Military Hospital of Constantine,Constantine,Constantine Province,Algeria,AFR,2015,2014,2014,2,SINGLE,HC - ACUTE,,,,ADULT,CHILD,,BLOOD,URINE,OUTBREAK,,Drug - MDR,K. pneu,,3,,,,,,S,0,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Epelboin et al. 2015,56,36.734012,3.090836,Sorbonne Universites,,,Algeria,AFR,2015,2012,2013,12,SINGLE,COMM,,,Traveler,ADULT,,,MULTI,,SURVEILLANCE,,Drug - MDR,E. coli,S,1,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Epelboin et al. 2015,56,36.734012,3.090836,Sorbonne Universites,,,Algeria,AFR,2015,2012,2013,12,SINGLE,COMM,,,Traveler,ADULT,,,BLOOD,,CASE SERIES,,Drug - MDR,K. pneu,S,1,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Epelboin et al. 2015,56,14.720312,-17.470635,Sorbonne Universites,,,Senegal,AFR,2015,2012,2013,12,SINGLE,COMM,,,Traveler,ADULT,,,STOOL,,SURVEILLANCE,,Drug - MDR,E. coli,S,2,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Epelboin et al. 2015,56,-6.165614,39.202517,Sorbonne Universites,,,Tanzania,AFR,2015,2012,2013,12,SINGLE,COMM,,,Traveler,ADULT,,,STOOL,,SURVEILLANCE,,Drug - MDR,E. coli,S,1,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
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Gamal et al. 2015,257,30.0131,31.2089,Theodor Bilharz Research Institute,Cairo,Giza Governorate,Egypt,EMR,2015,2014,2014,15,SINGLE,HC - ACUTE,,,,UNK,,,UNK,,CLIN LAB,,Drug - Carbapenem - R,K. pneu,R,8,,,,,,R,100,N,N,,,,N,,N,,,,Y,,,,,,,,N,,,,N,,,,,,,,,,,,,,Web of Science
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"Hawser et al. 2012, Personal Communication",268,30.0444,31.2357,Unspecified,,,Egypt,EMR,2012,2012,2016,60,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,E. coli,R,486,,,,,7.2,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,30.0444,31.2357,Unspecified,,,Egypt,EMR,2012,2012,2016,60,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. spp,S,7,,,,,0,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,30.0444,31.2357,Unspecified,,,Egypt,EMR,2012,2012,2016,60,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. oxy,R,8,,,,,12.5,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,30.0444,31.2357,Unspecified,,,Egypt,EMR,2012,2012,2016,60,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. pneu,R,425,,,,,33.6,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,-1.2921,36.8219,Unspecified,,,Kenya,AFR,2012,2012,2017,72,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,E. coli,R,126,,,,,2.4,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,-1.2921,36.8219,Unspecified,,,Kenya,AFR,2012,2012,2017,72,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. spp,S,4,,,,,0,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,-1.2921,36.8219,Unspecified,,,Kenya,AFR,2012,2012,2017,72,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. oxy,S,3,,,,,0,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,-1.2921,36.8219,Unspecified,,,Kenya,AFR,2012,2012,2017,72,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. pneu,R,68,,,,,19.1,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,-1.2921,36.8219,Unspecified,,,Kenya,AFR,2012,2012,2017,72,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. vari,S,5,,,,,0,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,31.6295,-7.9811,Unspecified,,,Morocco,EMR,2012,2010,2017,96,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,E. coli,R,1174,,,,,0.6,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,31.6295,-7.9811,Unspecified,,,Morocco,EMR,2012,2010,2017,96,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. spp,S,8,,,,,0,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,31.6295,-7.9811,Unspecified,,,Morocco,EMR,2012,2010,2017,96,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. oxy,S,25,,,,,0,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,31.6295,-7.9811,Unspecified,,,Morocco,EMR,2012,2010,2017,96,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. pneu,R,389,,,,,3.1,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,31.6295,-7.9811,Unspecified,,,Morocco,EMR,2012,2010,2017,96,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. vari,S,1,,,,,0,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2012,2004,2017,168,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,E. coli,R,2987,,,,,0.1,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2012,2004,2017,168,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. spp,R,94,,,,,3.2,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2012,2004,2017,168,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. orni,S,2,,,,,0,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2012,2004,2017,168,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. oxy,S,172,,,,,0,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2012,2004,2017,168,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. ozae,S,3,,,,,0,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2012,2004,2017,168,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. plan,S,1,,,,,0,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2012,2004,2017,168,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. pneu,R,1276,,,,,2.6,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2012,2004,2017,168,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. spp,S,5,,,,,0,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2012,2004,2017,168,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. vari,S,21,,,,,0,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2012,2011,2017,84,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,E. coli,R,1113,,,,,0.2,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2012,2011,2017,84,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. spp,S,12,,,,,0,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2012,2011,2017,84,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. oxy,S,24,,,,,0,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
"Hawser et al. 2012, Personal Communication",268,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2012,2011,2017,84,MULTI,HC - UNK,,,IAI,UNK,,,MULTI,,CLIN LAB,,,K. pneu,R,447,,,,,13.2,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Ayari et al. 2017,709,36.8065,10.1815,Military Hospital of Tunis; Habib Thameur Hospital,Tunis,Tunis Governorate,Tunisia,EMR,2017,2004,2012,108,MULTI,HC - ACUTE,,,,ALL,,,MULTI,,CLIN LAB,,Enzyme - ESBL+ ,E. coli,S,46,,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Hefzy et al. 2017,269,29.321366,30.833966,Fayoum University Hospital,Fayoum,Faiyum Governorate,Egypt,EMR,2017,2014,2015,4,SINGLE,COMM,,,UTI,UNK,,,URINE,,CLIN LAB,,Drug - Fluoroquinolone - R,E. coli,S,92,,,,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Ayibieke et al. 2018,332,9.393114,-0.823524,Tamale Teaching Hospital,Tamale,Northern Region,Ghana,AFR,2018,2016,2016,1,SINGLE,HC - ACUTE,,,,ADULT,,,URINE,,CASE SERIES,,Gene - bla NDM-1,E. coli,R,1,,,100,100,,,,N,,,,,N,,N,,,,Y,,,,,,,,,,,,N,,,,,,,,,,,,,,Web of Science
Helal et al. 2014_2,270,30.0444,31.2357,Cairo University Hospital,Cairo,Cairo Governorate,Egypt,EMR,2014,2011,2012,12,MULTI,HC - ACUTE,,,,UNK,,,UNK,,CLIN LAB,,Drug - Carbapenem - S,K. pneu,R,11,,,,,,,,N,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Henderson et al. 2019,271,30.0444,31.2357,Barts Health NHS Trust,,,Egypt,EMR,2019,,,,SINGLE,HC - ACUTE,,,Traveler,ALL,,,STOOL,,CLIN LAB,,,E. coli,S,1,,,,0,,,,N,,,,,N,,N,,,N,,,,,,,,,N,,,,N,,,,,,,,,,,,,,Web of Science
Ayoyi et al. 2017,359,-1.2921,36.8219,Unspecified,Nairobi,Nairobi County,Kenya,AFR,2017,2012,2016,24,MULTI,COMM,,,Pregnant; Colonized,ADULT,ADOLESCENT,,URINE,,SURVEILLANCE,,,E. coli,S,85,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Ayoyi et al. 2017,359,-1.2921,36.8219,Unspecified,Nairobi,Nairobi County,Kenya,AFR,2017,2012,2016,24,MULTI,COMM,,,Pregnant; Colonized,ADULT,ADOLESCENT,,URINE,,SURVEILLANCE,,,K. spp,R,17,,,5.9,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
El-Ghazzawy et al. 2015,273,31.201551,29.905256,Alexandria Main University Hospital,Alexandria,Alexandria Governorate,Egypt,EMR,2015,2015,2015,6,SINGLE,HC - ACUTE,,,,ADULT,,,MULTI,,CLIN LAB,,Drug - Carbapenem - R,E. coli,R,3,,,,,100,,,N,,,,,N,,,,,N,,,,,,,,,,,,,N,,,,,,,,,,,,,,Global Health
El-Ghazzawy et al. 2015,273,31.201551,29.905256,Alexandria Main University Hospital,Alexandria,Alexandria Governorate,Egypt,EMR,2015,2015,2015,6,SINGLE,HC - ACUTE,,,,ADULT,,,MULTI,,CLIN LAB,,Drug - Carbapenem - R,K. pneu,R,75,,,,,100,,,N,,,,,N,,,,,Y,,,,,,,,,,,,,N,,,,,,,,,,,,,,Global Health
Kamel et al. 2014,274,30.0444,31.2357,Unspecified,Cairo,Cairo Governorate,Egypt,EMR,2014,2011,2013,16,MULTI,HC - ACUTE,COMM,,DFU,ADULT,,,WOUND,,CLIN LAB,,,E. coli,R,24,,,4.16,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Kamel et al. 2014,274,30.0444,31.2357,Unspecified,Cairo,Cairo Governorate,Egypt,EMR,2014,2011,2013,16,MULTI,HC - ACUTE,COMM,,DFU,ADULT,,,WOUND,,CLIN LAB,,,K. spp,R,17,,,17.6,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Kamel et al. 2018,275,30.022878,31.23787,575357 Children's Cancer Hospital,Cairo,Cairo Governorate,Egypt,EMR,2018,2014,2016,25,SINGLE,HC - ACUTE,,,Cancer; Febrile Neutropenia,CHILD,,,MULTI,,CLIN LAB,,,E. coli,R,86,52.3,48,46.1,,,R,11.36,N,N,,,,N,,N,,,N,,,,,,,,,Y,,,,N,,,,,,,,,,,,,,Web of Science
Kamel et al. 2018,275,30.022878,31.23787,575357 Children's Cancer Hospital,Cairo,Cairo Governorate,Egypt,EMR,2018,2014,2016,25,SINGLE,HC - ACUTE,,,Cancer; Febrile Neutropenia,CHILD,,,MULTI,,CLIN LAB,,,K. spp,R,71,76.92,81,75,,,R,21.1,N,N,,,,N,,Y,,,Y,,,,,,,,,Y,,,,N,,,,,,,,,,,,,,Web of Science
Khalaf et al. 2009,276,30.0444,31.2357,Unspecified,Cairo,Cairo Governorate,Egypt,EMR,2009,2006,2006,12,SINGLE,HC - ACUTE,,,,ALL,,,MULTI,,CLIN LAB,,,E. coli,S,1,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Khalaf et al. 2009,276,30.0444,31.2357,Unspecified,Cairo,Cairo Governorate,Egypt,EMR,2009,2006,2006,12,SINGLE,HC - ACUTE,,,,ALL,,,MULTI,,CLIN LAB,,,K. pneu,S,3,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Khalifa et al. 2017,277,30.0444,31.2357,Alobour Hospital; Alraghama Hospital; Baltim Legitimacy Society Hospital; Kafr El-Sheikh City Public Hospital; Kafr El-Sheikh Legitimacy Society Hospital; National Cancer Institute  ,Kafr El-Sheikh; Cairo,Kafr El Sheikh Governorate; Giza Governorate,Egypt,EMR,2017,2014,2014,6,MULTI,HC - ACUTE,,,,ALL,,,MULTI,,CLIN LAB,,,E. coli,R,19,,,,,100,,,N,,,,,N,,N,,,,Y,,,,,,,,Y,,,,,Y,,,,,,,,,,,,,Pubmed
Khalifa et al. 2017,277,30.0444,31.2357,Alobour Hospital; Alraghama Hospital; Baltim Legitimacy Society Hospital; Kafr El-Sheikh City Public Hospital; Kafr El-Sheikh Legitimacy Society Hospital; National Cancer Institute  ,Kafr El-Sheikh; Cairo,Kafr El Sheikh Governorate; Giza Governorate,Egypt,EMR,2017,2014,2014,6,MULTI,HC - ACUTE,,,,ALL,,,MULTI,,CLIN LAB,,,K. pneu,R,89,,,,,100,,,N,,,,,N,,N,,,,Y,,,,,,,,Y,,,,,Y,,,,,,,,,,,,,Pubmed
Khalil et al. 2017,278,30.0444,31.2357,El-demerdash Hospital,Cairo,Cairo Governorate,Egypt,EMR,2017,2013,2015,20,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,Drug - Carbapenem - NS/R,K. pneu,R,46,,,100,100,,S,0,N,Y,,,,Y,,Y,,,,Y,,,,,,,,Y,,,,Y,,,,,,,,,,,,,,Pubmed
Khalil et al. 2019,279,29.995951,30.965789,Misr University for Science & Technology,,Giza Governorate,Egypt,EMR,2019,2016,2017,9,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,,K. pneu,R,43,,,,,58,,,Y,,,,,N,,N,,,,Y,,,,,,,,Y,,,,N,,,,,,,,,,,,,,Web of Science
Labib et al. 2018,280,30.029064,31.233346,Cairo University Children's Hospital,Cairo,Cairo Governorate,Egypt,EMR,2018,2016,2017,13,SINGLE,HC - ACUTE,,,,CHILD,INFANT,,MULTI,,CASE SERIES,,,E. coli,R,19,,,,95,,R,3.8,N,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Labib et al. 2018,280,30.029064,31.233346,Cairo University Children's Hospital,Cairo,Cairo Governorate,Egypt,EMR,2018,2016,2017,13,SINGLE,HC - ACUTE,,,,CHILD,INFANT,,MULTI,,CASE SERIES,,,K. spp,R,111,,,,78,,S,0,Y,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Lashin et al. 2017,281,30.0444,31.2357,Unspecified,,,Egypt,EMR,2017,,,,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,,E. coli,R,25,,,,8,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Google Scholar
Lashin et al. 2017,281,30.0444,31.2357,Unspecified,,,Egypt,EMR,2017,,,,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,,K. pneu,R,20,,,,15,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Google Scholar
Ballot et al. 2019,584,-26.2041,28.0473,University of Witwatersrand,Johannesburg,Gauteng Province,South Africa,AFR,2019,2013,2015,36,SINGLE,HC - ACUTE,,,Sepsis,NEONATE,,,BLOOD,,CASE SERIES,,Drug - MDR,E. coli,S,45,0,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Ballot et al. 2019,584,-26.2041,28.0473,University of Witwatersrand,Johannesburg,Gauteng Province,South Africa,AFR,2019,2013,2015,36,SINGLE,HC - ACUTE,,,Sepsis,NEONATE,,,BLOOD,,CASE SERIES,,Drug - MDR,K. pneu,R,308,4.3,,6.1,6.5,,,,N,,,N,,N,,N,,,Y,,,,,,,,,N,,,,Y,,,,,,,,,,,,,,Web of Science
Ballot et al. 2019,584,-26.2041,28.0473,University of Witwatersrand,Johannesburg,Gauteng Province,South Africa,AFR,2019,2013,2015,36,SINGLE,HC - ACUTE,,,Sepsis,NEONATE,,,BLOOD,,CASE SERIES,,Drug - MDR,K. spp,R,27,0,,3.7,3.8,,,,N,,,N,,N,,N,,,N,,,,,,,,,N,,,,Y,,,,,,,,,,,,,,Web of Science
Lob et al. 2018_2,282,30.0444,31.2357,Unspecified,,,Egypt,EMR,2018,2015,2016,24,MULTI,HC - ACUTE,,,UTI,UNK,,,URINE,,CLIN LAB,,,E. coli,R,212,17.9,,13.2,,,R,0.9,Y,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Lob et al. 2018_2,282,30.0444,31.2357,Unspecified,,,Egypt,EMR,2018,2015,2016,24,MULTI,HC - ACUTE,,,UTI,UNK,,,URINE,,CLIN LAB,,,K. oxy,R,3,33.3,,33.3,,,S,0,N,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Lob et al. 2018_2,282,30.0444,31.2357,Unspecified,,,Egypt,EMR,2018,2015,2016,24,MULTI,HC - ACUTE,,,UTI,UNK,,,URINE,,CLIN LAB,,,K. pneu,R,183,44.3,,41,,,R,2.2,Y,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Lob et al. 2018_2,282,-1.2921,36.8219,Unspecified,,,Kenya,AFR,2018,2015,2016,24,MULTI,HC - ACUTE,,,UTI,UNK,,,URINE,,CLIN LAB,,,E. coli,S,5,0,,0,,,S,0,N,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Lob et al. 2018_2,282,-1.2921,36.8219,Unspecified,,,Kenya,AFR,2018,2015,2016,24,MULTI,HC - ACUTE,,,UTI,UNK,,,URINE,,CLIN LAB,,,K. pneu,R,5,40,,40,,,S,0,N,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Lob et al. 2018_2,282,31.6295,-7.9811,Unspecified,,,Morocco,EMR,2018,2015,2016,24,MULTI,HC - ACUTE,,,UTI,UNK,,,URINE,,CLIN LAB,,,E. coli,R,346,2,,1.4,,,R,0.6,Y,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Lob et al. 2018_2,282,31.6295,-7.9811,Unspecified,,,Morocco,EMR,2018,2015,2016,24,MULTI,HC - ACUTE,,,UTI,UNK,,,URINE,,CLIN LAB,,,K. oxy,S,6,0,,0,,,S,0,N,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Lob et al. 2018_2,282,31.6295,-7.9811,Unspecified,,,Morocco,EMR,2018,2015,2016,24,MULTI,HC - ACUTE,,,UTI,UNK,,,URINE,,CLIN LAB,,,K. pneu,R,80,22.5,,12.5,,,R,1.3,Y,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Lob et al. 2018_2,282,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2018,2015,2016,24,MULTI,HC - ACUTE,,,UTI,UNK,,,URINE,,CLIN LAB,,,E. coli,R,576,0.2,,0.7,,,R,0.3,Y,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Lob et al. 2018_2,282,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2018,2015,2016,24,MULTI,HC - ACUTE,,,UTI,UNK,,,URINE,,CLIN LAB,,,K. oxy,R,33,3,,0,,,S,0,Y,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Lob et al. 2018_2,282,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2018,2015,2016,24,MULTI,HC - ACUTE,,,UTI,UNK,,,URINE,,CLIN LAB,,,K. pneu,R,232,10.8,,9.9,,,R,0.9,Y,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Lob et al. 2018_2,282,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2018,2015,2016,24,MULTI,HC - ACUTE,,,UTI,UNK,,,URINE,,CLIN LAB,,,E. coli,R,309,0.7,,0,,,R,1.3,Y,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Lob et al. 2018_2,282,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2018,2015,2016,24,MULTI,HC - ACUTE,,,UTI,UNK,,,URINE,,CLIN LAB,,,K. oxy,S,7,0,,0,,,S,0,N,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Lob et al. 2018_2,282,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2018,2015,2016,24,MULTI,HC - ACUTE,,,UTI,UNK,,,URINE,,CLIN LAB,,,K. pneu,R,96,15.6,,13.5,,,R,2.1,Y,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
El-Sokkary et al. 2015,293,31.0409,31.3785,Mansoura University Hospital,Mansoura,Dakahlia Governorate ,Egypt,EMR,2015,2011,2013,24,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,,E. coli,S,80,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Bamford et al. 2011,585,-29.0852,26.1596,,Bloemfontein,Free State,South Africa,AFR,2011,2010,2010,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,S,63,0,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Bamford et al. 2011,585,-26.2041,28.0473,,Johannesburg,Gauteng,South Africa,AFR,2011,2010,2010,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,S,463,0,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Bamford et al. 2011,585,-26.2041,28.0473,,Johannesburg,Gauteng,South Africa,AFR,2011,2010,2010,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,S,264,0,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Bamford et al. 2011,585,-25.7478,28.2292,,Pretoria,Gauteng,South Africa,AFR,2011,2010,2010,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,S,213,0,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Bamford et al. 2011,585,-33.9248,18.4241,,Cape Town,Western Cape,South Africa,AFR,2011,2010,2010,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,S,217,0,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Bamford et al. 2011,585,-33.9248,18.4241,,Cape Town,Western Cape,South Africa,AFR,2011,2010,2010,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,S,114,0,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Bamford et al. 2011,585,-29.0852,26.1596,,Bloemfontein,Free State,South Africa,AFR,2011,2010,2010,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,R,110,1,,0,2,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Bamford et al. 2011,585,-26.2041,28.0473,,Johannesburg,Gauteng,South Africa,AFR,2011,2010,2010,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,R,498,3,,1,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Bamford et al. 2011,585,-26.2041,28.0473,,Johannesburg,Gauteng,South Africa,AFR,2011,2010,2010,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,R,302,2,,1,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Bamford et al. 2011,585,-25.7478,28.2292,,Pretoria,Gauteng,South Africa,AFR,2011,2010,2010,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,R,445,1,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Bamford et al. 2011,585,-33.9248,18.4241,,Cape Town,Western Cape,South Africa,AFR,2011,2010,2010,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,R,254,4,,1,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Bamford et al. 2011,585,-33.9248,18.4241,,Cape Town,Western Cape,South Africa,AFR,2011,2010,2010,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,S,193,0,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Ehlkes et al. 2019,295,15.323157,38.923592,Unspecified,,,Eritrea,AFR,2019,2016,2017,12,SINGLE,COMM,,,Immigrant,ALL,,,STOOL,,SURVEILLANCE,,Enzyme - ESBL+ ,E. coli,S,14,0,,0,0,,,,N,N,,,,,,,,,N,,,,,,,,,N,,,,N,,,,,,N,N,,,,,,,Web of Science
Ehlkes et al. 2019,295,2.046848,45.318678,Unspecified,,,Somalia,AFR,2019,2016,2017,12,SINGLE,COMM,,,Immigrant,ALL,,,STOOL,,SURVEILLANCE,,Enzyme - ESBL+ ,E. coli,S,27,0,,0,0,,,,Y,N,,,,,,,,,N,,,,,,,,,N,,,,N,,,,,,N,N,,,,,,,Web of Science
Gashaw et al. 2018,296,7.6739,36.8358,Jimma University Medical Center,Jimma,Oromia Region,Ethiopia,AFR,2018,2016,2016,5,SINGLE,HC - ACUTE,,,HAI; BSI,UNK,,,MULTI,,CASE SERIES,,,E. coli,R,31,,,,16.1,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Gashaw et al. 2018,296,7.6739,36.8358,Jimma University Medical Center,Jimma,Oromia Region,Ethiopia,AFR,2018,2016,2016,5,SINGLE,HC - ACUTE,,,HAI; BSI,UNK,,,MULTI,,CASE SERIES,,,K. spp,R,30,,,,30,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Gebre-Sealsssie et al. 2007,297,7.6739,36.8358,Jimma Hospital,Jimma,Oromia Region,Ethiopia,AFR,2007,2003,2004,19,SINGLE,HC - ACUTE,,,,ADULT,CHILD,,MULTI,,CLIN LAB,,,E. coli,,17,,,,,,R,82.4,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Gebre-Sealsssie et al. 2007,297,7.6739,36.8358,Jimma Hospital,Jimma,Oromia Region,Ethiopia,AFR,2007,2003,2004,19,SINGLE,HC - ACUTE,,,,ADULT,CHILD,,MULTI,,CLIN LAB,,,K. spp,,15,,,,,,R,20,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Gizachew et al. 2019,298,7.6739,36.8358,Jimma University Hospital,Jimma,Oromia Region,Ethiopia,AFR,2019,2016,2016,5,SINGLE,HC - ACUTE,,,UTI,ADULT,,,URINE,,CASE SERIES,,,E. coli,R,55,,,10.9,41.8,,R,90.9,Y,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Index Medicus
Gizachew et al. 2019,298,7.6739,36.8358,Jimma University Hospital,Jimma,Oromia Region,Ethiopia,AFR,2019,2016,2016,5,SINGLE,HC - ACUTE,,,UTI,ADULT,,,URINE,,CASE SERIES,,,K. oxy,R,11,,,9.1,45.5,,R,72.7,N,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Index Medicus
Gizachew et al. 2019,298,7.6739,36.8358,Jimma University Hospital,Jimma,Oromia Region,Ethiopia,AFR,2019,2016,2016,5,SINGLE,HC - ACUTE,,,UTI,ADULT,,,URINE,,CASE SERIES,,,K. pneu,R,10,,,10,50,,R,90,N,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Index Medicus
Kalayu et al. 2019,299,9.043534,38.760338,Yekatit 12 Hospital,Addis Ababa,Oromia Region,Ethiopia,AFR,2019,2016,2017,13,SINGLE,HC - ACUTE,,,SSI,ALL,,,TISSUE,,CLIN LAB,,,E. coli,S,11,,,,0,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Kalayu et al. 2019,299,9.043534,38.760338,Yekatit 12 Hospital,Addis Ababa,Oromia Region,Ethiopia,AFR,2019,2016,2017,13,SINGLE,HC - ACUTE,,,SSI,ALL,,,TISSUE,,CLIN LAB,,,K. spp,S,10,,,,0,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Legese et al. 2017,300,8.9806,38.7578,Tikur Anbessa Specialized Hospital,Addis Ababa,Oromia Region,Ethiopia,AFR,2017,2014,2014,3,SINGLE,COMM,HC - ACUTE,,Sepsis; UTI,CHILD,,,BLOOD,URINE,CLIN LAB,,,E. coli,S,6,,,0,0,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Legese et al. 2017,300,8.9806,38.7578,Tikur Anbessa Specialized Hospital,Addis Ababa,Oromia Region,Ethiopia,AFR,2017,2014,2014,3,SINGLE,COMM,HC - ACUTE,,Sepsis; UTI,CHILD,,,BLOOD,URINE,CLIN LAB,,,K. oxy,R,1,,,0,100,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Legese et al. 2017,300,8.9806,38.7578,Tikur Anbessa Specialized Hospital,Addis Ababa,Oromia Region,Ethiopia,AFR,2017,2014,2014,3,SINGLE,COMM,HC - ACUTE,,Sepsis; UTI,CHILD,,,BLOOD,URINE,CLIN LAB,,,K. pneu,R,19,,,10.5,15.8,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Beyene et al. 2019,312,8.97875,38.752726,National Reference Laboratory,Addis Ababa,Oromia Region,Ethiopia,AFR,2019,2017,2018,7,SINGLE,HC - UNK,,,,ALL,,,MULTI,,CLIN LAB,,,E. coli,S,144,0,0,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
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Brink 2008,588,,,,,,South Africa,AFR,2008,2007,2007,6,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,R,503,0.2,,0.1,0.1,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
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Brink et al. 2007,589,,,,,,South Africa,AFR,2007,2006,2006,6,MULTI,UNK,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,S,471,0,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Brink et al. 2007,589,,,,,,South Africa,AFR,2007,2006,2006,6,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,R,636,2,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Brink et al. 2012,590,-26.2041,28.0473,,Johannesburg,Gauteng,South Africa,AFR,2011,2011,2011,7,MULTI,HC - ACUTE,,,,ELDERLY,,,URINE,,CASE SERIES,,Drug - Carbapenem - R,K. pneu,R,1,100,100,100,100,,,,N,,,,,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,
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Brink et al. 2012,590,-26.2708,28.1123,Unspecified,"Johannesburg, Pretoria",Gauteng Province,South Africa,AFR,2012,2011,2011,7,MULTI,HC - ACUTE,,,,ADULT,,,MULTI,,CASE SERIES,,Drug - MDR,K. pneu,,2,,,,,,S,0,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
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Brink et al. 2013,591,-26.2041,28.0473,,Johannesburg,Gauteng,South Africa,AFR,2013,2011,2012,,MULTI,HC - ACUTE,,,,ADULT,,,WOUND,,CASE SERIES,,Drug - Carbapenem - R,K. pneu,R,9,100,89,89,89,,,,N,,,,,,,,,,,,,,,,,,,Y,,Y,,,,,,,,,,,,,,,,
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Brown et al. 2017,482,7.3775,3.947,University College Hospital Ibadan,Ibadan,Oyo State,Nigeria,AFR,2017,2013,2014,15,SINGLE,HC - ACUTE,,,Sickle Cell Disease; Febrile,CHILD,,,BLOOD,,CASE SERIES,,,K. pneu,S,4,,,,0,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
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Ebenebe et al. 2014,488,6.0105,6.9103,,Nnewi,Anambra State,Nigeria,AFR,2014,2009,2010,20,SINGLE,HC - ACUTE,,,UTI,CHILD,ADOLESCENT,,URINE,,CASE SERIES,,,E. coli,S,105,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Ebenebe et al. 2014,488,6.0105,6.9103,,Nnewi,Anambra State,Nigeria,AFR,2014,2009,2010,20,SINGLE,HC - ACUTE,,,UTI,CHILD,ADOLESCENT,,URINE,,CASE SERIES,,,K. oxy,S,25,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Ebenebe et al. 2014,488,6.0105,6.9103,,Nnewi,Anambra State,Nigeria,AFR,2014,2009,2010,20,SINGLE,HC - ACUTE,,,UTI,CHILD,ADOLESCENT,,URINE,,CASE SERIES,,,K. pneu,S,77,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
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Ebenebe et al. 2014,488,6.025896935,6.914693598,Nnamdi Azikiwe University Teaching Hospital,Nnewi,Anambra State,Nigeria,AFR,2014,2009,2010,21,SINGLE,COMM,,,UTI,CHILD,,,URINE,,CLIN LAB,,,K. pneu,,78,,,,,,R,100,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Ebenebe et al. 2014,488,6.025896935,6.914693598,Nnamdi Azikiwe University Teaching Hospital,Nnewi,Anambra State,Nigeria,AFR,2014,2009,2010,21,SINGLE,COMM,,,UTI,CHILD,,,URINE,,CLIN LAB,,,K. oxy,,25,,,,,,R,100,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Egbe et al. 2011,489,6.335,5.6037,,Benin City ,Edo State,Nigeria,AFR,2011,2008,2010,36,SINGLE,HC - ACUTE,,,Wound,ALL,,,WOUND,,CLIN LAB,,,E. coli,R,165,,,1.8,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Egbe et al. 2011,489,6.335,5.6037,,Benin City ,Edo State,Nigeria,AFR,2011,2008,2010,36,SINGLE,HC - ACUTE,,,Wound,ALL,,,WOUND,,CLIN LAB,,,K. pneu,R,182,,,1.1,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
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Budel et al. 2019,697,-6.157577,39.196587,Unspecified,,Zanzibar Region,Tanzania,AFR,2019,2018,2018,2,SINGLE,COMM,,,Workers - Healthcare,ADULT,,,STOOL,,SURVEILLANCE,,Drug - Cefotaxime/Ceftazidime/Colistin - R,K. pneu,S,53,0,,,,,R,39.6,Y,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,N,N,,,,,,,Web of Science
Ejiofor et al. 2018,490,6.222,7.0821,Chukwuemeka Odumegwu Ojukwu University Teaching Hospital ,Awka,Anambra State,Nigeria,AFR,2019,2016,2016,5,SINGLE,HC - ACUTE,,,Sepsis,NEONATE,,,BLOOD,UMBILICAL,CLIN LAB,,,E. coli,R,12,,,,87.9,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Elikwu et al. 2017,491,6.891122,3.7173,Babcock University Teaching Hospital,Ilisan,Southwest Region,Nigeria,AFR,2017,2015,2016,5,MULTI,HC - ACUTE,COMM,,UTI,ALL,,,URINE,,CASE SERIES,,,E. coli,S,96,,,,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Elikwu et al. 2017,491,6.891122,3.7173,Babcock University Teaching Hospital,Ilisan,Southwest Region,Nigeria,AFR,2017,2015,2016,5,MULTI,HC - ACUTE,COMM,,UTI,ALL,,,URINE,,CASE SERIES,,,K. spp,S,48,,,,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Ella et al. 2007,492,11.086632,7.719083,Unspecified,Zaria,Kaduna State,Nigeria,AFR,2007,,,,SINGLE,HC - ACUTE,,,Sepsis,NEONATE,,,BLOOD,,CLIN LAB,,,E. coli,,1,,,,,,R,66.6,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Ella et al. 2007,492,11.086632,7.719083,Unspecified,Zaria,Kaduna State,Nigeria,AFR,2007,,,,SINGLE,HC - ACUTE,,,Sepsis,NEONATE,,,BLOOD,,CLIN LAB,,,K. pneu,,3,,,,,,S,0,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Faari et al. 2015,493,8.537305,4.647378,University of Ilorin Teaching Hospital,Ilorin,Kwara State,Nigeria,AFR,2015,2009,2009,6,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,Enzyme - ESBL+ ,K. spp,S,98,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Fadeyi et al. 2016,494,8.4799,4.5418,,Ilorin,Kwara,Nigeria,AFR,2016,2013,2014,5,SINGLE,HC - ACUTE,,,,ALL,,,MULTI,,CLIN LAB,,,K. oxy,S,49,,0,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Fadeyi et al. 2016,494,8.4799,4.5418,,Ilorin,Kwara,Nigeria,AFR,2016,2013,2014,5,SINGLE,HC - ACUTE,,,,ALL,,,MULTI,,CLIN LAB,,,K. pneu,S,138,,0,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Giwa et al. 2018,495,11.0855,7.7199,Ahmadu Bellu University Teaching Hospital,Zaria,Kaduna State,Nigeria,AFR,2018,2012,2012,5,SINGLE,HC - ACUTE,COMM,,,ALL,,,URINE,,CLIN LAB,,Enzyme - ESBL+ ,E. coli,S,46,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Giwa et al. 2018,495,11.0855,7.7199,Ahmadu Bellu University Teaching Hospital,Zaria,Kaduna State,Nigeria,AFR,2018,2012,2012,5,SINGLE,HC - ACUTE,COMM,,,ALL,,,URINE,,CLIN LAB,,Enzyme - ESBL+ ,K. pneu,S,14,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Buys et al. 2016,592,-33.9546,18.4877,,Rondebosch,Western Cape,South Africa,AFR,2016,2006,2011,72,SINGLE,HC - ACUTE,COMM,,,CHILD,ADOLESCENT,,BLOOD,,CLIN LAB,,,K. pneu,R,409,0.5,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Ephraim et al. 2017,497,6.335,5.6037,University of Benin Teaching Hospital,Benin City ,Edo State,Nigeria,AFR,2017,2016,2016,3,SINGLE,HC - ACUTE,COMM,,,UNK,,,MULTI,,CLIN LAB,,,E. coli,R,89,,,20.2,23.6,,,,Y,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Ephraim et al. 2017,497,6.335,5.6037,University of Benin Teaching Hospital,Benin City ,Edo State,Nigeria,AFR,2017,2016,2016,3,SINGLE,HC - ACUTE,COMM,,,UNK,,,MULTI,,CLIN LAB,,,K. spp,R,103,,,28.2,39.8,,,,Y,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Ibrahim et al. 2017,498,12.0022,8.592,,Kano,,Nigeria,AFR,2017,,,12,MULTI,HC - ACUTE,COMM,,,ALL,,,MULTI,,CLIN LAB,,Drug - MDR,E. coli,R,140,,,30.7,47.1,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Ibrahim et al. 2017,498,12.0022,8.592,,Kano,,Nigeria,AFR,2017,,,12,MULTI,HC - ACUTE,COMM,,,ALL,,,MULTI,,CLIN LAB,,Drug - MDR,K. pneu,R,108,,,44.4,31.4,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Ibrahim et al. 2017,498,12.0022,8.592,Aminu Kano Teaching Hospital; Murtala Muhammad Specialist Hospital,Kano,Kano State,Nigeria,AFR,2017,,,12,MULTI,HC - ACUTE,COMM,,,ALL,,,MULTI,,CLIN LAB,,Enzyme - ESBL+; Gene - Carbapenemase+,E. coli,,117,,,,,,R,33.3,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Ibrahim et al. 2017,498,12.0022,8.592,Aminu Kano Teaching Hospital; Murtala Muhammad Specialist Hospital,Kano,Kano State,Nigeria,AFR,2017,,,12,MULTI,HC - ACUTE,COMM,,,ALL,,,MULTI,,CLIN LAB,,Enzyme - ESBL+; Gene - Carbapenemase+,K. pneu,,120,,,,,,R,37.5,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
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Idowu et al. 2011,499,7.4905,4.5521,Obafemi Awolowo University Teaching Hospital,Ile-Ife,Osun State,Nigeria,AFR,2011,2008,2009,8,SINGLE,HC - ACUTE,,,,UNK,,,WOUND,,CLIN LAB,,Enzyme - ESBL+ ,K. spp,,12,,,,,,R,16.7,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Igwe et al. 2016,500,11.086632,7.719083,Ahmadu Bello University Teaching Hospital Shika; St. Luke Anglican Hospital Wusasa; Gambo Sawaba General Hospital Kofan-Gaya; Ahmadu Bello University Clinic Sickbay,Zaria,Kaduna State,Nigeria,AFR,2016,2014,2014,6,MULTI,HC - ACUTE,,,Diarrhea; UTI,UNK,,,URINE,STOOL,CLIN LAB,,Drug - MDR,E. coli,S,86,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Google Scholar
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Illiyasu et al. 2018,501,12.0022,8.592,Amino Kano Teaching Hospital,Kano,Kano State,Nigeria,AFR,2018,2012,2014,24,SINGLE,HC - ACUTE,,,,ALL,,,MULTI,,CASE SERIES,,,E. coli,,50,,,,,,S,0,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Illiyasu et al. 2018,501,12.0022,8.592,Amino Kano Teaching Hospital,Kano,Kano State,Nigeria,AFR,2018,2012,2014,24,SINGLE,HC - ACUTE,,,,ALL,,,MULTI,,CASE SERIES,,,K. pneu,S,9,,,,0,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Illiyasu et al. 2018,501,12.0022,8.592,Amino Kano Teaching Hospital,Kano,Kano State,Nigeria,AFR,2018,2012,2014,24,SINGLE,HC - ACUTE,,,,ALL,,,MULTI,,CASE SERIES,,,K. pneu,,8,,,,,,S,0,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Inwezerua et al. 2014,502,7.871566,3.913236,University College Hospital Ibadan; Bowen Teaching Hospital Ogbomoso; Oluyoro Catholic Hospital Ibadan; General Hospital Adeoyo Ibadan,,Oyo State,Nigeria,AFR,2014,2010,2011,12,MULTI,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,,E. coli,R,57,,,2,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Iregbu et al. 2015,503,9.0765,7.3986,National Hospital,Abuja,Federal Capital Territory,Nigeria,AFR,2015,2010,2013,48,SINGLE,HC - ACUTE,,,Meningitis,CHILD,INFANT,,CSF,,CLIN LAB,,,E. coli,S,4,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Iregbu et al. 2015,503,9.0765,7.3986,National Hospital,Abuja,Federal Capital Territory,Nigeria,AFR,2015,2010,2013,48,SINGLE,HC - ACUTE,,,Meningitis,CHILD,INFANT,,CSF,,CLIN LAB,,,K. pneu,S,6,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Iregbu and Nwajiobi-Princewill 2013,504,9.0765,7.3986,,Abuja,Federal Capital Territory,Nigeria,AFR,2013,2010,2012,36,SINGLE,HC - ACUTE,,,,ALL,,,URINE,,CLIN LAB,,,E. coli,R,45,,,11,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Iregbu and Nwajiobi-Princewill 2013,504,9.0765,7.3986,,Abuja,Federal Capital Territory,Nigeria,AFR,2013,2010,2012,36,SINGLE,HC - ACUTE,,,,ALL,,,URINE,,CLIN LAB,,,K. spp,R,37,,,3,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Iregbu and Sonibare 2015,505,9.0765,7.3986,,Abuja,Federal Capital Territory,Nigeria,AFR,2014,2010,2012,36,SINGLE,HC - ACUTE,,,ICU,ALL,,,MULTI,,CLIN LAB,,,E. coli,R,10,,,10,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Iregbu et al. 2013,506,9.0765,7.3986,,Abuja,Federal Capital Territory,Nigeria,AFR,2013,2010,2010,10,SINGLE,HC - ACUTE,,,,ALL,,,WOUND,,CLIN LAB,,,E. coli,S,9,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Iregbu et al. 2013,506,9.0765,7.3986,,Abuja,Federal Capital Territory,Nigeria,AFR,2013,2010,2010,10,SINGLE,HC - ACUTE,,,,ALL,,,WOUND,,CLIN LAB,,,K. pneu,S,5,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Carroll et al. 2016,563,-1.9706,30.1044,King Faisal Hosptial,Kigali,Kigali Province,Rwanda,AFR,2016,2009,2013,60,SINGLE,HC - ACUTE,COMM,,,UNK,,,MULTI,,CLIN LAB,,,E. coli,,2473,,,,,,R,1.4,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Carroll et al. 2016,563,-1.9706,30.1044,King Faisal Hosptial,Kigali,Kigali Province,Rwanda,AFR,2016,2009,2013,60,SINGLE,HC - ACUTE,COMM,,,UNK,,,MULTI,,CLIN LAB,,,K. spp,,975,,,,,,R,0.2,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Carroll et al. 2016,563,-1.9706,30.1044,,Kigali,,Rwanda,AFR,2016,2009,2013,60,SINGLE,HC - ACUTE,COMM,,,ALL,,,MULTI,,CLIN LAB,,,E. coli,R,2473,,,7.8,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Carroll et al. 2016,563,-1.9706,30.1044,,Kigali,,Rwanda,AFR,2016,2009,2013,60,SINGLE,HC - ACUTE,COMM,,,ALL,,,MULTI,,CLIN LAB,,,K. spp,R,975,,,10.6,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Iregbu, Zubair et al. 2013",508,9.0765,7.3986,,Abuja,Federal Capital Territory,Nigeria,AFR,2013,2010,2012,36,SINGLE,HC - ACUTE,,,,INFANT,,,MULTI,,CLIN LAB,,,E. coli,R,5,,,20,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Iroha et al. 2015,509,6.284921,8.084724,Federal Medical Center,Abakaliki,Ebonyi State,Nigeria,AFR,2015,,,,SINGLE,COMM,,,,ALL,,,BLOOD,URINE,CLIN LAB,,,E. coli,S,51,,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Iroha et al. 2016,511,6.3231,8.112,,Abakaliki,Ebonyi State,Nigeria,AFR,2016,2013,2014,12,SINGLE,HC - ACUTE,,,VVF,UNK,,,URINE,,CASE SERIES,,,E. coli,S,79,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Iroha et al. 2016,511,6.3231,8.112,,Abakaliki,Ebonyi State,Nigeria,AFR,2016,2013,2014,12,SINGLE,HC - ACUTE,,,VVF,UNK,,,URINE,,CASE SERIES,,,K. pneu,S,93,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Iroha et al. 2016_2,512,6.331709,8.107928,Federal Teaching Hospital,Abakaliki,Ebonyi State,Nigeria,AFR,2016,,,,SINGLE,HC - ACUTE,COMM,,UTI,CHILD,,,URINE,,CLIN LAB,,,E. coli,R,30,56.6,,23.3,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Iroha et al. 2016_2,512,6.331709,8.107928,Federal Teaching Hospital,Abakaliki,Ebonyi State,Nigeria,AFR,2016,,,,SINGLE,HC - ACUTE,COMM,,UTI,CHILD,,,URINE,,CLIN LAB,,,K. spp,R,10,80,,40,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Isaiah et al. 2011,513,9.2035,12.4954,,Yola,Adamawa State,Nigeria,AFR,2011,,,,SINGLE,HC - ACUTE,,,,ALL,,,MULTI,,CLIN LAB,,,E. coli,S,350,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Iwuafor et al. 2016,514,6.517631,3.353789,Lagos University Teaching Hospital,Lagos,Lagos State,Nigeria,AFR,2016,2011,2012,11,SINGLE,HC - ACUTE,,,ICU,ADULT,CHILD,,MULTI,,CASE SERIES,,,E. coli,S,3,,,,0,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Iwuafor et al. 2016,514,6.517631,3.353789,Lagos University Teaching Hospital,Lagos,Lagos State,Nigeria,AFR,2016,2011,2012,11,SINGLE,HC - ACUTE,,,ICU,ADULT,CHILD,,MULTI,,CASE SERIES,,,K. pneu,S,3,,,,0,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
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Jesumithewe et al. 2017,515,6.335,5.6037,,Benin City ,,Nigeria,AFR,2017,2015,2015,3,MULTI,HC - ACUTE,,,,ALL,,,MULTI,,CLIN LAB,,,E. coli,R,101,5,,,,,,,Y,,,,,,,,,,,,,,,,,,,Y,,,,,,,,,,,,,,,,,,
Jesumithewe et al. 2017,515,6.5438,5.8987,Unspecified,,Edo State,Nigeria,AFR,2017,2015,2015,3,MULTI,HC - UNK,,,,UNK,,,MULTI,,CLIN LAB,,Drug - Meropenem/Ertapenem - R,K. pneu,,4,,,,,,S,0,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Jesumithewe et al. 2017,515,6.335,5.6037,,Benin City ,,Nigeria,afr,2017,2015,2015,3,MULTI,HC - ACUTE,,,,ALL,,,MULTI,,CLIN LAB,,,K. pneu,R,44,10,,,,,,,Y,,,,,,,,,,,Y,,,,,,,,Y,,Y,,,,,,,,,,,,,,,,
Jombo et al. 2011,516,4.9757,8.3417,Calabar Teaching Hospital,Calabar,Cross River State,Nigeria,AFR,2011,2004,2009,60,SINGLE,HC - ACUTE,COMM,,UTI,ALL,,,URINE,,CLIN LAB,,,E. coli,,109,,,,,,S,0,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
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Kazmierczak et al. 2016,519,-1.2921,36.8219,Unspecified,,,Kenya,AFR,2016,2012,2014,36,MULTI,HC - UNK,,,,UNK,,,MULTI,,CLIN LAB,,Gene - Carbapenemase+,K. pneu,R,1,,,,,,,,N,,,,,N,,N,,,N,Y,,Y,,,,,,N,,,,N,N,,,,,,,,,,,,,Web of Science
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Kazmierczak et al. 2016,519,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2016,2012,2014,36,MULTI,HC - UNK,,,,UNK,,,MULTI,,CLIN LAB,,Gene - Carbapenemase+,K. pneu,R,2,,,,,,,,N,,,,,N,,N,,,N,Y,,N,,,,,,N,,,,N,N,,,,,,,,,,,,,Web of Science
Kingsley et al. 2013,520,5.0377,7.9128,,Uyo,Akwa Ibom State,Nigeria,AFR,2013,2011,2012,24,SINGLE,HC - ACUTE,,,Sepsis,ALL,,,BLOOD,,CASE SERIES,,,E. coli,S,29,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Kingsley et al. 2013,520,5.0377,7.9128,,Uyo,Akwa Ibom State,Nigeria,AFR,2013,2011,2012,24,SINGLE,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,S,18,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Li et al. 2014,521,7.146967,3.36572,Unspecified,,,Nigeria,AFR,2014,,,1,SINGLE,HC - ACUTE,,,Traveler; Hip Fracture; UTI,ELDERLY,,,URINE,BLOOD,CASE SERIES,,,K. pneu,R,1,,,,,,S,0,N,N,,,,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Chalya et al. 2015,698,-2.528202,32.90783,Bugando Medical Centre,Mwanza,Mwanza Region,Tanzania,AFR,2015,2006,2014,90,SINGLE,HC - ACUTE,,,Fournier's Gangrene,ADULT,CHILD,,MULTI,,CASE SERIES,,,E. coli,S,13,,,0,0,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Chalya et al. 2015,698,-2.528202,32.90783,Bugando Medical Centre,Mwanza,Mwanza Region,Tanzania,AFR,2015,2006,2014,90,SINGLE,HC - ACUTE,,,Fournier's Gangrene,ADULT,CHILD,,MULTI,,CASE SERIES,,,K. pneu,S,7,,,0,0,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Charfi et al. 2015,725,35.765968,10.810954,Hospital of Monastir,Monastir,Monastir Governorate,Tunisia,EMR,2015,2011,2013,36,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,Drug - Carbapenem - NS/R,E. coli,R,1,100,,,,,S,0,N,N,,N,,N,,N,,,N,,,,,,,,,N,,,,N,,,,,,,,,,,,,,Global Health
Charfi et al. 2015,725,35.765968,10.810954,Hospital of Monastir,Monastir,Monastir Governorate,Tunisia,EMR,2015,2011,2013,36,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,Drug - Carbapenem - NS/R,K. pneu,R,2,100,,,,50,S,0,N,N,,N,,N,,N,,,N,,,,,,,,,Y,,,,N,,,,,,,,,,,,,,Global Health
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Charfi et al. 2016,724,35.7643,10.8113,Center of Matenity and Neonatology of Monastir,Monastir,Monastir Governorate,Tunisia,EMR,2016,2010,2013,45,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,Enzyme - ESBL+ ,K. pneu,S,37,0,,,,,S,0,Y,Y,,N,,,,,,,,,,,,,,N,,,,,,,,,,,,,,,,,,,,Web of Science
Chaula et al. 2017,699,-2.5282,32.9078,,Bugando,Mwanza,Tanzania,AFR,2017,2016,2016,3,MULTI,HC - ACUTE,COMM,,HIV +; Pregnant,ADULT,,,URINE,,CASE SERIES,,,E. coli,R,30,,,,3.3,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Cherif et al. 2016,726,36.8065,10.1815,Charles Nicolle Hospital,Tunis,Tunis Governorate,Tunisia,EMR,2016,2006,2009,40,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,Enzyme - AmpC,E. coli,S,5,0,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Cherif et al. 2016,726,36.8065,10.1815,Charles Nicolle Hospital,Tunis,Tunis Governorate,Tunisia,EMR,2016,2006,2009,40,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,Enzyme - AmpC,K. pneu,S,4,0,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
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Halfon et al. 2016,564,-1.955869,30.060465,University Teaching Hospital of Kigali ,Kigali,Kigali Province,Rwanda,AFR,2016,2015,2015,9,SINGLE,HC - ACUTE,,,Pregnant - Post Caesarean; Peritonitis; Exploratory Laparotomy,ADULT,,,PERITONEAL FLUID,,CLIN LAB,,,K. pneu,S,8,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
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Christopher et al. 2013,700,-2.528202,32.90783,Bugando Medical Centre,Mwanza,Mwanza Region,Tanzania,AFR,2013,2011,2012,6,SINGLE,HC - ACUTE,,,Febrile,CHILD,,,BLOOD,,CASE SERIES,,,K. pneu,S,6,,,,0,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Cisse et al. 2002,579,14.694764,-17.464189,University Teaching Hospital Dakar,Dakar,Dakar Department,Senegal,AFR,2001,1997,1998,24,SINGLE,HC - ACUTE,,,,NEONATE,,,BLOOD,,CASE SERIES,,,K. spp,,134,,,,,,S,0,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
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Dromigny et al. 2002,581,14.657251,-17.435536,Insitut Pasteur de Dakar,Dakar,Dakar Department,Senegal,AFR,2002,1999,2000,24,SINGLE,COMM,,,UTI,ADULT,,,URINE,,CLIN LAB,,Enzyme - ESBL+ ,K. pneu,S,6,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Leski et al. 2013,582,7.9552,-11.741,,Bo,,Sierra Leone,AFR,2013,2010,2011,6,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,Drug - Carbapenem - R,E. coli,R,,,,,,,,,N,,,,,,,,,,,,,,,,,,,,Y,,,,,,,,,,,,,,,,,
Leski et al. 2013,582,7.9552,-11.741,,Bo,,Sierra Leone,AFR,2013,2010,2011,6,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,,E. coli,R,,,,,,,,,N,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Leski et al. 2013,582,7.9552,-11.741,,Bo,,Sierra Leone,AFR,2013,2010,2011,6,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,,E. coli,R,,,,,,,,,N,,,,,,,,,,,,,,,,,,,,,,,Y,,,,,,,,,,,,,,
Leski et al. 2013,582,7.9552,-11.741,,Bo,,Sierra Leone,AFR,2013,2010,2011,6,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,,K. pneu,R,,,,,,,,,N,,,,,,,,,,,,,,,,,,,,Y,,,,,,,,,,,,,,,,,
Leski et al. 2013,582,7.9552,-11.741,,Bo,,Sierra Leone,AFR,2013,2010,2011,6,SINGLE,HC - ACUTE,,,,ALL,,,MULTI,,CLIN LAB,,,K. pneu,R,,,,,,,,,N,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Leski et al. 2013,582,7.9552,-11.741,,Bo,,Sierra Leone,AFR,2013,2010,2011,6,SINGLE,HC - ACUTE,,,,ALL,,,MULTI,,CLIN LAB,,,K. pneu,R,,,,,,,,,N,,,,,,,,,,,,,,,,,,,,,,,Y,,,,,,,,,,,,,,
Leski et al. 2016,583,7.9552,-11.741,,Bo ,,Sierra Leone,AFR,2016,2013,2014,1,SINGLE,HC - ACUTE,COMM,,,ALL,,,URINE,,CLIN LAB,,,E. coli,S,13,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Leski et al. 2016,583,7.9552,-11.741,,Bo,,Sierra Leone,AFR,2016,2013,2014,1,SINGLE,HC - ACUTE,COMM,,,ALL,,,URINE,,CLIN LAB,,,K. pneu,S,15,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Crowther-Gibson et al. 2011,595,-29.0852,26.1596,,Bloemfontein,Free State,South Africa,AFR,2011,2009,2009,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,S,40,0,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Crowther-Gibson et al. 2011,595,-26.2041,28.0473,,Johannesburg,Gauteng,South Africa,AFR,2011,2009,2009,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,S,298,0,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Crowther-Gibson et al. 2011,595,-26.2041,28.0473,,Johannesburg,Gauteng,South Africa,AFR,2011,2009,2009,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,S,417,0,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Crowther-Gibson et al. 2011,595,-25.7478,28.2292,,Pretoria,Gauteng,South Africa,AFR,2011,2009,2009,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,S,62,0,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Crowther-Gibson et al. 2011,595,-25.7478,28.2292,,Pretoria,Gauteng,South Africa,AFR,2011,2009,2009,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,S,193,0,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Crowther-Gibson et al. 2011,595,-33.9248,18.4241,,Cape Town,Western Cape,South Africa,AFR,2011,2009,2009,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,S,281,0,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Crowther-Gibson et al. 2011,595,-33.9248,18.4241,,Cape Town,Western Cape,South Africa,AFR,2011,2009,2009,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,S,131,0,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Crowther-Gibson et al. 2011,595,-29.0852,26.1596,,Bloemfontein,Free State,South Africa,AFR,2011,2009,2009,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,R,89,4,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Crowther-Gibson et al. 2011,595,-26.2041,28.0473,,Johannesburg,Gauteng,South Africa,AFR,2011,2009,2009,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,S,258,0,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Crowther-Gibson et al. 2011,595,-26.2041,28.0473,,Johannesburg,Gauteng,South Africa,AFR,2011,2009,2009,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,R,388,2,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Crowther-Gibson et al. 2011,595,-25.7478,28.2292,,Pretoria,Gauteng,South Africa,AFR,2011,2009,2009,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,R,112,1,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Crowther-Gibson et al. 2011,595,-25.7478,28.2292,,Pretoria,Gauteng,South Africa,AFR,2011,2009,2009,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,S,440,0,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Crowther-Gibson et al. 2011,595,-33.9248,18.4241,,Cape Town,Western Cape,South Africa,AFR,2011,2009,2009,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,S,325,0,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Crowther-Gibson et al. 2011,595,-33.9248,18.4241,,Cape Town,Western Cape,South Africa,AFR,2011,2009,2009,12,MULTI,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,S,190,0,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
de Jager et al. 2015,596,-26.2041,28.0473,,Johannesburg,Gauteng,South Africa,AFR,2015,2011,2012,16,SINGLE,HC - ACUTE,,,,ADULT,,,MULTI,,OUTBREAK,,,K. oxy,R,2,,,,,,,,N,,,,,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,
de Jager et al. 2015,596,-26.2041,28.0473,,Johannesburg,Gauteng,South Africa,AFR,2015,2011,2013,29,SINGLE,HC - ACUTE,,,,ADULT,,,MULTI,,OUTBREAK,,Drug - Carbapenem - R,K. pneu,R,28,,,,,100,,,N,,,,,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,
Dramowski et al. 2016,598,-33.9249,18.4241,Tygerberg Children's Hospital,Cape Town,Western Cape Province,South Africa,AFR,2016,2014,2015,12,SINGLE,HC - ACUTE,,,,CHILD,,,MULTI,,CASE SERIES,,,E. coli,S,16,0,,,0,,S,0,N,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Dramowski et al. 2016,598,-33.9249,18.4241,Tygerberg Children's Hospital,Cape Town,Western Cape Province,South Africa,AFR,2016,2014,2015,12,SINGLE,HC - ACUTE,,,,CHILD,,,MULTI,,CASE SERIES,,,K. pneu,S,35,0,,,0,,S,0,Y,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Elliott et al. 2006,599,-33.9248,18.4241,,Cape Town,Western Cape,South Africa,AFR,2006,2005,2005,2,SINGLE,HC - ACUTE,,,,ELDERLY,,,MULTI,,CASE SERIES,,Drug - Carbapenem - R,K. pneu,R,4,50,,0,25,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Essack and Connolly 2011,600,-29.8586,31.0218,,Durban,KwaZulu-Natal,South Africa,AFR,2011,,,,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,,K. pneu,R,116,,,,7,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
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Grami et al. 2016,740,35.5024,11.0457,University Hospital Tahar Sfar,Mahdia,Mahdia Province,Tunisia,EMR,2016,2012,2013,12,SINGLE,HC - ACUTE,,,,ADULT,,,URINE,,CASE SERIES,,,K. pneu,R,106,1.9,,1.9,1.9,,,,Y,,,,,,,,,,,,,,,,,,,Y,,,,,,,,,,,,,,,,,,Global Health
Guermazi-Toumi et al. 2017,741,34.4311,8.7757,Regional Hospital Houcine Bouzaiene,Gafsa,Gafsa Governorate,Tunisia,EMR,2017,2015,2016,18,SINGLE,HC - ACUTE,COMM,,,ALL,,,URINE,,CLIN LAB,,,E. coli,R,753,,,3.7,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Guermazi-Toumi et al. 2017,741,34.4311,8.7757,Regional Hospital Houcine Bouzaiene,Gafsa,Gafsa Governorate,Tunisia,EMR,2017,2015,2016,18,SINGLE,HC - ACUTE,COMM,,,ALL,,,URINE,,CLIN LAB,,,E. coli,,1075,,,,,,R,0.8,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Guermazi-Toumi et al. 2017,741,34.4311,8.7757,Regional Hospital Houcine Bouzaiene,Gafsa,Gafsa Governorate,Tunisia,EMR,2017,2015,2016,18,SINGLE,HC - ACUTE,COMM,,,ALL,,,URINE,,CLIN LAB,,,K. oxy,S,18,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Guermazi-Toumi et al. 2017,741,34.4311,8.7757,Regional Hospital Houcine Bouzaiene,Gafsa,Gafsa Governorate,Tunisia,EMR,2017,2015,2016,18,SINGLE,HC - ACUTE,COMM,,,ALL,,,URINE,,CLIN LAB,,,K. oxy,,25,,,,,,S,0,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Guermazi-Toumi et al. 2017,741,34.4311,8.7757,Regional Hospital Houcine Bouzaiene,Gafsa,Gafsa Governorate,Tunisia,EMR,2017,2015,2016,18,SINGLE,HC - ACUTE,COMM,,,ALL,,,URINE,,CLIN LAB,,,K. pneu,R,131,,,3.1,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Guermazi-Toumi et al. 2017,741,34.4311,8.7757,Regional Hospital Houcine Bouzaiene,Gafsa,Gafsa Governorate,Tunisia,EMR,2017,2015,2016,18,SINGLE,HC - ACUTE,COMM,,,ALL,,,URINE,,CLIN LAB,,,K. pneu,,193,,,,,,R,1.6,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Hammami et al. 2017,742,36.8065,10.1815,Charles Nicolle Hospital,Tunis,Tunis Governorate,Tunisia,EMR,2017,2014,2014,3,SINGLE,HC - ACUTE,COMM,,Colonized,ADULT,ADOLESCENT,,STOOL,,CASE SERIES,,Drug - Cefotaxime - R,K. pneu,R,3,100,,66.6,100,,,,N,,,N,,N,,,,,N,Y,,,,,,,,Y,,,,N,,,,,,,,,,,,,,Pubmed
Hammami et al. 2013,743,36.8065,10.1815,Charles Nicolle Hospital,Tunis,Tunis Governorate,Tunisia,EMR,2013,2007,2009,36,SINGLE,COMM,,,UTI,ALL,,,URINE,,CASE SERIES,,Enzyme - ESBL+ ,E. coli,S,13,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Hamzaoui et al. 2018_2,744,36.8065,10.1815,Charles Nicolle Hospital,Tunis,Tunis Governorate,Tunisia,EMR,2018,2010,2015,72,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,Drug - Carbapenem - R; Gene - Carbapenemase-,K. pneu,R,44,100,,68.2,50,,,,N,,,N,,N,,N,,,N,,,,,,N,,,N,,,,N,,,,,,,,,,,,,,Web of Science
Harchay et al. 2013,745,36.801863,10.154549,La Rabta University Hospital,Tunis,Tunis Governorate,Tunisia,EMR,2011,2007,2008,24,SINGLE,HC - ACUTE,,,,NEONATE,CHILD,,MULTI,,OUTBREAK,,Enzyme - ESBL+ ,K. pneu,S,131,,,0,,,S,0,Y,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global health
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Izdebski et al. 2015,746,36.8065,10.1815,Unspecified,Tunis,Tunis Governorate,Tunisia,EMR,2015,2015,2015,1,SINGLE,TRAVELERS,HC - ACUTE,,,ADULT,,,STOOL,,CASE SERIES,,,K. pneu,R,2,100,,,100,,,,N,,,,,,,,,,,Y,,,,,,,,N,,,,,,,,,,,,,,,,,,Embase
Jaballah et al. 2007,747,36.807203,10.159162,Children's Hospital of Tunis,Tunis,Tunis Governorate,Tunisia,EMR,2007,2004,2005,24,SINGLE,HC - ACUTE,,,HAI; BSI,CHILD,,,BLOOD,,CASE SERIES,,Enzyme - ESBL+ ,K. pneu,S,7,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Jaidane et al. 2017,748,35.8245,10.6346,Sahloul University Hospital,Sahoul,Sousse Governorate,Tunisia,EMR,2017,2012,2016,48,SINGLE,HC - ACUTE,,,,ALL,,,MULTI,,CASE SERIES,,,K. pneu,R,2826,,,,,17.4,R,0.5,Y,Y,,,,,,,,,,Y,,,,,,,,Y,,,,,,,,,,,,,,,,Y,Y,Pubmed
George et al. 2018,786,1.076683,34.1763,Mbale Regional Referral Hospital,Mballe,Eastern Region,Uganda,AFR,2018,2015,2015,4,SINGLE,HC - ACUTE,,,Surgery - Postoperative,ALL,,,WOUND,,CLIN LAB,,,E. coli,R,22,,,4.5,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
George et al. 2018,786,1.076683,34.1763,Mbale Regional Referral Hospital,Mballe,Eastern Region,Uganda,AFR,2018,2015,2015,4,SINGLE,HC - ACUTE,,,Surgery - Postoperative,ALL,,,WOUND,,CLIN LAB,,,K. pneu,S,15,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Jeddi et al. 2010,749,36.8065,10.1815,Aziza Othmana University Hospital,Tunis,Tunis Governorate,Tunisia,EMR,2010,2007,2017,3,SINGLE,HC - ACUTE,,,Sepsis; Febrile Neutropenia,ALL,,,BLOOD,URINE,CASE SERIES,,,E. coli,,1,,,,,,S,0,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Jeddi et al. 2010,749,36.8065,10.1815,Aziza Othmana University Hospital,Tunis,Tunis Governorate,Tunisia,EMR,2010,2007,2017,3,SINGLE,HC - ACUTE,,,Sepsis; Febrile Neutropenia,ALL,,,BLOOD,URINE,CASE SERIES,,,K. pneu,,5,,,,,,S,0,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Khalifa et al. 2012,750,35.5024,11.0457,University Hospital,Mahdia,Mahdia Province,Tunisia,EMR,2012,2009,2009,12,SINGLE,HC - ACUTE,,,UTI,UNK,,,URINE,,CLIN LAB,,,K. spp,S,198,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Kollenda et al. 2019,751,36.8065,10.1815,Military Hospital,Tunis,Tunis Governorate,Tunisia,EMR,2019,2014,2019,45,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,Drug - Ertapenem - R,E. coli,R,6,100,,,,,,,N,,,,,N,,N,,,N,,,,,,,,,Y,,,,N,,,,,,,,,,,,,,Web of Science
Kollenda et al. 2019,751,36.8065,10.1815,Military Hospital,Tunis,Tunis Governorate,Tunisia,EMR,2019,2014,2019,45,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,Drug - Ertapenem - R,K. pneu,R,170,100,,,,,,,N,,,,,,N,N,,,Y,,,,,,,,,Y,,,,Y,,,,,,,,,,,,,,Web of Science
Ktari et al. 2006,752,34.7398,10.76,Sfax University Hospital,Sfax,Sfax Governorate,Tunisia,EMR,2006,2005,2005,3,SINGLE,HC - ACUTE,,,,ADULT,,,MULTI,,OUTBREAK,,Drug - Imipenem - R,K. pneu,R,20,,,100,,,,,N,,,,,N,,,,,,,,,,,,,,,,,,,,,Y,,,,,,,,,,,Global health
Ktari et al. 2011,753,34.7398,10.76,Sfax University Hospital,Sfax,Sfax Governorate,Tunisia,EMR,2011,2009,2010,6,SINGLE,HC - ACUTE,,,,UNK,,,UNK,,CLIN LAB,,Drug - Cefotaxime/Ceftazidime/Cefepime/Imipenem - RS,K. pneu,R,7,100,,14.3,,,,,N,,,,,,,,,,,,,,,,,,,Y,,,,,,,,,,,,,,,,,,Global Health
Lahlaoui et al. 2017,754,36.8065,10.1815,Military Hospital,Tunis,Tunis Governorate,Tunisia,EMR,2017,2015,2015,1,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,Drug - Carbapenem - RS,K. pneu,R,11,,,,,100,S,0,N,Y,,,,N,,N,,,N,,,,,,,,,Y,,,Y,N,,,,,,,,,,,,,,Pubmed
Lahlaoui et al. 2012,755,36.8065,10.1815,Unspecified,Tunis,Tunis Governorate,Tunisia,EMR,2012,2010,2010,1,MULTI,HC - ACUTE,,,,UNK,,,URINE,,CASE SERIES,,Enzyme - ESBL+ ,K. pneu,R,2,100,,100,100,,,,N,,,,,,,,,,,,,,,,,,,,Y,,,,,,,,,,,,,,,,,Web of Science
Lamia et al. 2018,756,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2018,2017,2017,6,SINGLE,HC - ACUTE,,,Burn,UNK,,,WOUND,,CLIN LAB,,Drug - Carbapenem - RS,E. coli,R,1,,,,,100,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Lamia et al. 2018,756,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2018,2017,2017,6,SINGLE,HC - ACUTE,,,Burn,UNK,,,WOUND,,CLIN LAB,,Drug - Carbapenem - RS,K. oxy,R,3,,,,,100,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Lamia et al. 2018,756,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2018,2017,2017,6,SINGLE,HC - ACUTE,,,Burn,UNK,,,WOUND,,CLIN LAB,,Drug - Carbapenem - RS,K. pneu,R,22,,,,,100,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Lamorde et al. 2018,775,0.345301,32.584359,Jinja regional Referral Hospital; Arua RRH; Mubende RRH; Kabale RRH; Apac District Hospital; Tororo District Hospital,Jinja; Arua; Mubende; Kabale; Apac; Tororo,Eastern Region; Northern Region; Central Region; Western Region;,Uganda,AFR,2018,2016,2017,18,MULTI,HC - ACUTE,,,Febrile,CHILD,,,BLOOD,,CASE SERIES,,,E. coli,S,5,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Lamorde et al. 2018,775,0.345301,32.584359,Jinja regional Referral Hospital; Arua RRH; Mubende RRH; Kabale RRH; Apac District Hospital; Tororo District Hospital,Jinja; Arua; Mubende; Kabale; Apac; Tororo,Eastern Region; Northern Region; Central Region; Western Region;,Uganda,AFR,2018,2016,2017,18,MULTI,HC - ACUTE,,,Febrile,CHILD,,,BLOOD,,CASE SERIES,,,K. pneu,R,3,,,23,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Lubwama et al. 2019,776,0.341394,32.577939,Uganda Cancer Insitute,Kampala,Kampala District,Uganda,AFR,2019,2014,2014,9,SINGLE,HC - ACUTE,,,Febrile,ALL,,,BLOOD,,CASE SERIES,,,E. coli,R,11,,,36.4,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Lubwama et al. 2019,776,0.341394,32.577939,Uganda Cancer Insitute,Kampala,Kampala District,Uganda,AFR,2019,2014,2014,9,SINGLE,HC - ACUTE,,,Febrile,ALL,,,BLOOD,,CASE SERIES,,,K. pneu,R,7,,,57.1,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Kabwe et al. 2016,789,-15.4323,28.3136,,Lusaka,,Zambia,AFR,2016,2013,2014,7,SINGLE,HC - ACUTE,,,Sepsis,INFANT,NEONATE,,BLOOD,,CASE SERIES,,,K. spp,R,73,,,1,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Kajumbula et al. 2018,787,0.345301,32.584359,Makerere University College of Health Sciences; Mulago Hospital,Kampala,Kampala District,Uganda,AFR,2018,2013,2014,19,SINGLE,HC - ACUTE,,,,UNK,,,BLOOD,,CLIN LAB,,,E. coli,R,36,,,19,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Kajumbula et al. 2018,787,0.345301,32.584359,Mulago National Referral Hospital,Kampala,Kampala District,Uganda,AFR,2018,2013,2014,19,SINGLE,HC - ACUTE,,,,UNK,,,BLOOD,,CLIN LAB,,,K. pneu,R,17,,,20,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Kemigisha et al. 2018,788,-0.6072,30.6545,Mbarara Regional Referral Hospital; Holy Innocents Children's Hospital,Mbarara,Western Region,Uganda,AFR,2018,2009,2012,39,MULTI,COMM,,,CNSI,CHILD,,,BLOOD,CSF,CASE SERIES,,,E. coli,S,2,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Maalej et al. 2012,764,34.7398,10.76,Habib Bourguiba Teaching Hospital,Sfax,Sfax Governorate,Tunisia,EMR,2012,2005,2008,72,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,,E. coli,,12574,,,,,,R,0.09,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Maalej et al. 2012,764,34.7398,10.76,Habib Bourguiba Teaching Hospital,Sfax,Sfax Governorate,Tunisia,EMR,2012,2005,2008,72,SINGLE,HC - ACUTE,,,,UNK,,,MULTI,,CLIN LAB,,,K. pneu,,4548,,,,,,R,1.2,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Maamar et al. 2016,757,36.8065,10.1815,Charles Nicolle Hospital,Tunis,Tunis Governorate,Tunisia,EMR,2016,2014,2015,3,SINGLE,HC - ACUTE,,,ICU,ADULT,CHILD,,STOOL,,SURVEILLANCE,,Drug - Cefotaxime - R,E. coli,R,7,,,,,100,,,N,,,N,,,,N,,,N,N,,,,,,,,N,,,,,,,,,,,,,,,,,,Global Health
Maamar et al. 2016,757,36.8065,10.1815,Charles Nicolle Hospital,Tunis,Tunis Governorate,Tunisia,EMR,2016,2014,2015,3,SINGLE,HC - ACUTE,,,ICU,ADULT,CHILD,,STOOL,,SURVEILLANCE,,Drug - Cefotaxime - R,K. pneu,R,25,,,,,100,,,N,,,N,,,,N,,,N,Y,,,,,,,,Y,,,,,,,,,,,,,,,,,,Global Health
Maamar et al. 2016_2,758,36.8065,10.1815,Charles Nicolle Hospital,Tunis,Tunis Governorate,Tunisia,EMR,2016,2011,2011,12,SINGLE,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,Enzyme - ESBL+ ,K. pneu,R,5,80,,60,60,,S,0,N,N,,,,,,N,,,,,,,,,,,,Y,,,,,,,,,,,,,,,,,,Embase
Maataoui et al. 2019,148,6.826289,-5.291439,Saint-Louis University Hospital; Agence Nationale de Securite du Medicament,,,Côte d'Ivoire,AFR,2019,2012,2012,10,SINGLE,COMM,,,Military,ADULT,,,STOOL,,SURVEILLANCE,,Enzyme - ESBL+ ,E. coli,S,57,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Magazi et al. 2017,626,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2017,2010,2015,72,MULTI,HC - ACUTE,COMM,,UTI,ADULT,,,URINE,,CLIN LAB,,Enzyme - ESBL+ ,E. coli,R,52,,,,,2,,,N,,,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Magazi et al. 2017,626,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2017,2010,2015,72,MULTI,HC - ACUTE,COMM,,UTI,ADULT,,,URINE,,CLIN LAB,,Enzyme - ESBL+ ,K. pneu,R,86,,,,,6,,,N,,,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Magazi et al. 2018,625,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2018,2015,2016,24,MULTI,HC - UNK,,,,UNK,,,UNK,,CLIN LAB,,,E. coli,,683,,,,,,R,0.9,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,embase
Magazi et al. 2018,625,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2018,2015,2016,24,MULTI,HC - UNK,,,,UNK,,,UNK,,CLIN LAB,,,K. pneu,,441,,,,,,R,2.9,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,embase
Mahamat et al. 2019_3,138,12.142698,15.061983,Unspecified,N'Djamena,N'Djamena Region,Chad,AFR,2019,2017,2017,3,MULTI,HC - ACUTE,COMM,,,UNK,,,MULTI,,CLIN LAB,,Gene - Carbapenemase+,E. coli,R,18,66.6,28,33.3,22.2,,S,0,N,Y,,,,,,,,,,,,Y,,,,,,,,Y,,,,,,,,,,,,,,,,Web of Science
Mahdi et al. 2014,284,30.0444,31.2357,Minya University Hospital; Minya General Hospital; Minya Insurance Hospital,,Minya Governorate,Egypt,EMR,2014,2014,2014,6,MULTI,HC - ACUTE,COMM,,Sepsis,NEONATE,,,BLOOD,,CLIN LAB,,,K. pneu,S,5,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Maina et al. 2016,346,-1.2921,36.8219,,Nairobi,,Kenya,AFR,2016,2012,2012,12,SINGLE,COMM,,,,ALL,,,URINE,,CLIN LAB,,,E. coli,S,1047,,,,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Maina et al. 2016,346,-1.2921,36.8219,,Nairobi,,Kenya,AFR,2016,2012,2012,12,SINGLE,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,S,48,,,,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Maina et al. 2016,346,-1.2921,36.8219,,Nairobi,,Kenya,AFR,2016,2013,2013,12,SINGLE,COMM,,,,ALL,,,URINE,,CLIN LAB,,,E. coli,S,903,,,,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Maina et al. 2016,346,-1.2921,36.8219,,Nairobi,,Kenya,AFR,2016,2013,2013,12,SINGLE,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,S,44,,,,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Maina et al. 2016,346,-1.2921,36.8219,,Nairobi,,Kenya,AFR,2016,2014,2014,12,SINGLE,COMM,,,,ALL,,,URINE,,CLIN LAB,,,E. coli,S,962,,,,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Maina et al. 2016,346,-1.2921,36.8219,,Nairobi,,Kenya,AFR,2016,2014,2014,12,SINGLE,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,S,47,,,,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Maina et al. 2016,346,-1.2921,36.8219,,Nairobi,,Kenya,AFR,2016,2012,2012,12,SINGLE,COMM,,,,ALL,,,URINE,,CLIN LAB,,,K. pneu,R,135,,,,1,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Maina et al. 2016,346,-1.2921,36.8219,,Nairobi,,Kenya,AFR,2016,2012,2012,12,SINGLE,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,R,31,,,,3,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Maina et al. 2016,346,-1.2921,36.8219,,Nairobi,,Kenya,AFR,2016,2013,2013,12,SINGLE,COMM,,,,ALL,,,URINE,,CLIN LAB,,,K. pneu,R,125,,,,2,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Maina et al. 2016,346,-1.2921,36.8219,,Nairobi,,Kenya,AFR,2016,2013,2013,12,SINGLE,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,R,25,,,,8,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Maina et al. 2016,346,-1.2921,36.8219,,Nairobi,,Kenya,AFR,2016,2014,2014,12,SINGLE,COMM,,,,ALL,,,URINE,,CLIN LAB,,,K. pneu,R,105,,,,1,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Maina et al. 2016,346,-1.2921,36.8219,,Nairobi,,Kenya,AFR,2016,2014,2014,12,SINGLE,HC - ACUTE,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,R,27,,,,30,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Mairi et al. 2019,69,36.734012,3.090836,Unspecified,,,Algeria,AFR,2019,2016,2016,4,MULTI,HC - ACUTE,,,Mother and Child  ,ADULT,,,STOOL,VAGINAL,SURVEILLANCE,,Gene - bla OXA-48  ,E. coli,R,4,75,,25,25,,,,N,,,,,,,,,,,,,,,,,,,Y,,,,,,,,,,,,,,,,,,Web of Science
Mairi et al. 2019,69,36.734012,3.090836,Unspecified,,,Algeria,AFR,2019,2016,2016,4,MULTI,HC - ACUTE,,,Mother and Child  ,ADULT,NEONATE,,STOOL,VAGINAL,SURVEILLANCE,,Gene - bla OXA-48  ,K. pneu,R,24,58.3,,58.3,12.5,,,,N,,,,,,,,,,,,,,,,,,,Y,,,,,,,,,,,,,,,,,,Web of Science
Mairi et al. 2019_2,68,36.734012,3.090836,Unspecified,Bejaia; Tizi Ouzou,Bejaia Province; Tizi Ouzou Province,Algeria,AFR,2019,2017,2017,4,MULTI,HC - ACUTE,COMM,,,ALL,,,STOOL,,CLIN LAB,,Gene - bla OXA-48  ,K. pneu,R,4,100,,25,0,,S,0,N,N,,,,N,,N,,,N,,,,,,,,,Y,,,,N,,,,,,,,,,,,,,Web of Science
Makanjuola et al. 2018,522,7.3775,3.947,University College Hospital,Ibadan,Oyo State,Nigeria,AFR,2018,2014,2014,12,SINGLE,HC - ACUTE,,,,ALL,,,MULTI,,CLIN LAB,,,E. coli,S,7,,,,0,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
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Malande et al. 2016,627,-33.9248,18.4241,,Cape Town,Western Cape,South Africa,AFR,2016,2010,2015,72,SINGLE,HC - ACUTE,,,,INFANT,CHILD,,MULTI,,CLIN LAB,,Drug - Carbapenem - R,E. coli,R,1,100,,100,100,,,,N,,,,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,
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NICD_2013,637,-28.4541,26.7968,,,Free State,South Africa,AFR,2013,2012,2012,6,MULTI,UNK,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,R,17,24,,,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
NICD_2013,637,-26.2708,28.1123,,,Gauteng,South Africa,AFR,2013,2012,2012,6,MULTI,UNK,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,R,202,6,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
NICD_2013,637,-28.5305,30.8958,,,KwaZulu-Natal,South Africa,AFR,2013,2012,2012,6,MULTI,UNK,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,R,21,9.5,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
NICD_2013,637,-33.2278,21.8569,,,Western Cape,South Africa,AFR,2013,2012,2012,6,MULTI,UNK,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,R,77,3,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
NICD_2014,638,,,,,,South Africa,AFR,2014,2013,2013,12,MULTI,UNK,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,R,1444,0.8,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
NICD_2014,638,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2014,2013,2013,12,MULTI,UNK,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,R,2014,4.2,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
NICD_2015,639,,,,,,South Africa,AFR,2015,2014,2014,11,MULTI,UNK,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,R,1353,1.3,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
NICD_2015,639,,,,,,South Africa,AFR,2015,2014,2014,11,MULTI,UNK,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,R,1979,4.5,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
NICD_2016,640,,,,,,South Africa,AFR,2016,2015,2015,6,MULTI,UNK,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,R,832,0.5,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
NICD_2016,640,,,,,,South Africa,AFR,2016,2015,2015,6,MULTI,UNK,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,R,1230,,,5.6,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
NICD_2016,640,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2016,2015,2015,6,MULTI,UNK,,,,ALL,,,BLOOD,,CLIN LAB,,,E. coli,,545,,,,,,R,0.7,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
NICD_2016,640,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2016,2015,2015,6,MULTI,UNK,,,,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,,839,,,,,,R,0.4,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
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Toy et al. 2019,112,8.97875,38.752726,Unspecified,,,Ethiopia,AFR,2019,2010,2014,60,MULTI,HC - ACUTE,COMM,,BSI,UNK,,,BLOOD,,CLIN LAB,,,E. coli,S,1,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Toy et al. 2019,112,-18.875931,47.516622,Unspecified,,,Madagascar,AFR,2019,2010,2014,60,MULTI,HC - ACUTE,COMM,,BSI,UNK,,,BLOOD,,CLIN LAB,,,E. coli,S,3,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Toy et al. 2019,112,-18.875931,47.516622,Unspecified,,,Madagascar,AFR,2019,2010,2014,60,MULTI,HC - ACUTE,COMM,,BSI,UNK,,,BLOOD,,CLIN LAB,,,K. spp,S,8,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Toy et al. 2019,112,14.720312,-17.470635,Unspecified,,,Senegal,AFR,2019,2010,2014,60,MULTI,HC - ACUTE,COMM,,BSI,UNK,,,BLOOD,,CLIN LAB,,,E. coli,S,15,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Toy et al. 2019,112,14.720312,-17.470635,Unspecified,,,Senegal,AFR,2019,2010,2014,60,MULTI,HC - ACUTE,COMM,,BSI,UNK,,,BLOOD,,CLIN LAB,,,K. spp,S,1,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Toy et al. 2019,112,15.5007,32.5599,Unspecified,,,Sudan,EMR,2019,2010,2014,60,MULTI,HC - ACUTE,COMM,,BSI,UNK,,,BLOOD,,CLIN LAB,,,E. coli,S,5,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
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Toy et al. 2019,112,-6.165614,39.202517,Unspecified,,,Tanzania,AFR,2019,2010,2014,60,MULTI,HC - ACUTE,COMM,,BSI,UNK,,,BLOOD,,CLIN LAB,,,K. spp,S,2,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
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Tuem et al. 2019,307,13.4936,39.4657,Ayder Comprehenxive specialized Hospital,Mekelle,Tigray Region,Ethiopia,AFR,2019,2012,2017,72,SINGLE,HC - ACUTE,,,UTI,ALL,,,URINE,,CLIN LAB,,,K. oxy,R,3,,,0,33.3,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Tuem et al. 2019,307,13.4936,39.4657,Ayder Comprehenxive specialized Hospital,Mekelle,Tigray Region,Ethiopia,AFR,2019,2012,2017,72,SINGLE,HC - ACUTE,,,UTI,ALL,,,URINE,,CLIN LAB,,,K. pneu,S,8,,,0,0,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
Tufa et al. 2019,308,7.969292,39.131567,Asella Teaching Hospital ,Asella,Oromia Region,Ethiopia,AFR,2019,2016,2018,27,SINGLE,HC - ACUTE,,,Febrile,ALL,,,BLOOD,,CLIN LAB,,,K. pneu,R,15,,,,,,,,N,,,,,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Tumuhamye et al. 2019,782,0.345301,32.584359,Mulago National Referral Hospital,Kampala,Kampala District,Uganda,AFR,2019,,,,SINGLE,HC - ACUTE,,,Sepsis,NEONATE,,,BLOOD,,CASE SERIES,,Enzyme - ESBL+ ,E. coli,S,1,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
Tumuhamye et al. 2019,782,0.345301,32.584359,Mulago National Referral Hospital,Kampala,Kampala District,Uganda,AFR,2019,,,,SINGLE,HC - ACUTE,,,Sepsis,NEONATE,,,BLOOD,,CASE SERIES,,Enzyme - ESBL+ ,K. pneu,S,2,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
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Uwaezuoke et al. 2017,462,9.0765,7.3986,,Abuja,Federal Capital Territory,Nigeria,AFR,2017,,,1,SINGLE,HC - ACUTE,,,,CHILD,ADOLESCENT,,URINE,,CASE SERIES,,,K. pneu,R,2,100,,100,100,,,,N,,,,,,,,,,,Y,,,,,,,,,,Y,,,,,,,,,,,,,,,,
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Vasaikar et al. 2017,662,-31.5883,28.7781,,Mthatha,Eastern Cape,South Africa,AFR,2017,2011,2014,32,MULTI,HC - ACUTE,COMM,,,ALL,,,MULTI,,CLIN LAB,,,K. spp,R,202,3.5,,0,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Walkty et al. 2015,464,6.5244,3.3792,Unspecified,Lagos,Lagos State,Nigeria,AFR,2015,2014,2014,1,SINGLE,HC - ACUTE,,,Traveler; Trauma,ADULT,,,MULTI,,CASE SERIES,,,E. coli,R,1,100,,,100,,S,0,N,N,,N,,N,,N,,,N,N,,,,,,,,N,,Y,,N,,,,,,,,,,,,,,Embase
Walkty et al. 2015,464,6.5244,3.3792,Unspecified,Lagos,Lagos State,Nigeria,AFR,2015,2014,2014,1,SINGLE,HC - ACUTE,,,Traveler; Trauma,ADULT,,,MULTI,,CASE SERIES,,,K. pneu,R,1,100,,,100,,S,0,N,N,,N,,N,,N,,,N,Y,,,,,,,,N,,N,,N,,,,,,,,,,,,,,Embase
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Wangai et al. 2019,356,-1.301194,36.806947,Kenyatta National Hospital,Nairobi,Nairobi County,Kenya,AFR,2019,2015,2015,12,SINGLE,HC - ACUTE,COMM,,,UNK,,,MULTI,,CLIN LAB,,,K. pneu,R,110,,,,24,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
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Wassef et al. 2016,196,30.029064,31.233346,Cairo University Children's Hospital,Cairo,Cairo Governorate,Egypt,EMR,2016,2013,2014,8,SINGLE,HC - ACUTE,,,,NEONATE,INFANT,,MULTI,,OUTBREAK,,Drug - Carbapenem - RS,K. pneu,R,51,,,100,100,,,,N,,,,,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,Pubmed
WHO 2014,25,,,,,,Burkina Faso,AFR,2013,2008,2009,,UNK,UNK,,,,UNK,,,UNK,,CLIN LAB,,,K. pneu,S,20,,,,,0,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Grey Literature
WHO 2014,25,,,,,,Central African Republic,AFR,2013,,,,MULTI,UNK,,,,UNK,,,UNK,,CLIN LAB,,,K. pneu,S,43,,,,,0,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Grey Literature
WHO 2014,25,30.0444,31.2357,U.S. Naval Medical Research Unit No. 3,,,Egypt,EMR,2014,2002,2010,108,MULTI,HC - ACUTE,,,,UNK,,,UNK,,SURVEILLANCE,,,K. pneu,R,594,,,,,5.6,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2014,25,,,,,,Mauritius,AFR,2012,2012,2013,,SINGLE,HC - ACUTE,,,,UNK,,,UNK,,CLIN LAB,,,K. pneu,R,104,,,,,1.9,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Grey Literature
WHO 2014,25,31.6295,-7.9811,Unspecified,,,Morocco,EMR,2013,2012,2012,12,UNK,HC - ACUTE,,,,UNK,,,UNK,,SURVEILLANCE,,,K. pneu,S,10,,,,,0,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2014,25,,,,,,Namibia,AFR,2013,2012,2012,,SINGLE,UNK,,,,UNK,,,UNK,,CLIN LAB,,,K. pneu,R,280,,,,,0.4,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Grey Literature
WHO 2014,25,,,,,,South Africa,AFR,2013,2012,2012,,UNK,UNK,,,,UNK,,,BLOOD,,CLIN LAB,,,K. pneu,R,923,3.8,,,1,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Grey Literature
WHO 2016-2017,26,30.0444,31.2357,Unspecified,,,Egypt,EMR,2017,2016,2016,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,E. coli,R,25,,,,,24,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2016-2017,26,30.0444,31.2357,Unspecified,,,Egypt,EMR,2017,2016,2016,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,,CLIN LAB,,,K. pneu,,1,,,,,,S,0,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2016-2017,26,30.0444,31.2357,Unspecified,,,Egypt,EMR,2017,2016,2016,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,K. pneu,R,56,,,,60.7,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2016-2017,26,-18.875931,47.516622,Unspecified,,,Madagascar,AFR,2017,2016,2016,12,MULTI,HC - ACUTE,COMM,,,UNK,,,BLOOD,,CLIN LAB,,,E. coli,S,8,0,,,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2016-2017,26,-18.875931,47.516622,Unspecified,,,Madagascar,AFR,2017,2016,2016,12,MULTI,HC - ACUTE,COMM,,,UNK,,,BLOOD,,CLIN LAB,,,K. pneu,R,11,,,,,9.1,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2016-2017,26,-13.954093,33.778293,Unspecified,,,Malawi,AFR,2017,2016,2016,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,E. coli,R,657,,,,4.1,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2016-2017,26,-13.954093,33.778293,Unspecified,,,Malawi,AFR,2017,2016,2016,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,K. pneu,R,173,,,,17.3,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2016-2017,26,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2017,2016,2016,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,E. coli,R,6937,,,,,1.5,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2016-2017,26,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2017,2016,2016,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,E. coli,,564,,,,,,S,0,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2016-2017,26,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2017,2016,2016,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,K. pneu,,357,,,,,,R,6.2,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2016-2017,26,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2017,2016,2016,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,K. pneu,R,1870,,,,,15.5,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2016-2017,26,0.345301,32.584359,Unspecified,,,Uganda,AFR,2017,2016,2016,12,UNK,UNK,,,,UNK,,,BLOOD,,CLIN LAB,,,E. coli,S,1,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2016-2017,26,0.345301,32.584359,Unspecified,,,Uganda,AFR,2017,2016,2016,12,UNK,UNK,,,,UNK,,,BLOOD,,CLIN LAB,,,K. pneu,S,3,,,,,0,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2016-2017,26,-15.389645,28.32177,Unspecified,,,Zambia,AFR,2017,2016,2016,12,SINGLE,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,E. coli,S,56,0,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2016-2017,26,-15.389645,28.32177,Unspecified,,,Zambia,AFR,2017,2016,2016,12,SINGLE,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,K. pneu,R,120,1.7,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,30.0444,31.2357,Unspecified,,,Egypt,EMR,2018,2017,2017,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,E. coli,R,18,,,27.8,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,30.0444,31.2357,Unspecified,,,Egypt,EMR,2018,2017,2017,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,K. pneu,R,34,,,,77.3,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,-18.875931,47.516622,Unspecified,,,Madagascar,AFR,2018,2017,2017,12,SINGLE,COMM,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,E. coli,R,672,0.6,,0.3,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,-18.875931,47.516622,Unspecified,,,Madagascar,AFR,2018,2017,2017,12,SINGLE,COMM,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,K. pneu,R,122,3.3,,0.8,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,-13.954093,33.778293,Unspecified,,,Malawi,AFR,2018,2017,2017,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,E. coli,R,1935,,,,1.4,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,-13.954093,33.778293,Unspecified,,,Malawi,AFR,2018,2017,2017,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,K. pneu,R,1103,,,,2.7,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,7.146967,3.36572,Unspecified,,,Nigeria,AFR,2018,2017,2017,12,MULTI,HC - UNK,,,,UNK,,,BLOOD,,CLIN LAB,,,E. coli,,7,,,,,,S,0,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,7.146967,3.36572,Unspecified,,,Nigeria,AFR,2018,2017,2017,12,MULTI,HC - UNK,,,,UNK,,,BLOOD,,CLIN LAB,,,E. coli,R,41,,,,,17.1,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,7.146967,3.36572,Unspecified,,,Nigeria,AFR,2018,2017,2017,12,MULTI,HC - UNK,,,,UNK,,,BLOOD,,CLIN LAB,,,K. pneu,,21,,,,,,S,0,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,7.146967,3.36572,Unspecified,,,Nigeria,AFR,2018,2017,2017,12,MULTI,HC - UNK,,,,UNK,,,BLOOD,,CLIN LAB,,,K. pneu,R,66,,,,,21.2,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,15.5007,32.5599,Unspecified,,,Sudan,EMR,2018,2017,2017,12,MULTI,HC - ACUTE,COMM,,,UNK,,,URINE,,CLIN LAB,,,E. coli,R,4,,,25,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2018,2017,2017,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,E. coli,,830,,,,,,S,0,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2018,2017,2017,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,E. coli,R,2356,,,,,0.9,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2018,2017,2017,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,K. pneu,,282,,,,,,R,3.2,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2018,2017,2017,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,K. pneu,R,1356,,,,,13.1,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,0.345301,32.584359,Unspecified,,,Uganda,AFR,2018,2017,2017,12,MULTI,HC - ACUTE,COMM,,,UNK,,,BLOOD,,CLIN LAB,,,E. coli,,5,,,,,,S,0,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,0.345301,32.584359,Unspecified,,,Uganda,AFR,2018,2017,2017,12,MULTI,HC - ACUTE,COMM,,,UNK,,,BLOOD,,CLIN LAB,,,E. coli,R,13,,,7.7,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,0.345301,32.584359,Unspecified,,,Uganda,AFR,2018,2017,2017,12,MULTI,HC - ACUTE,COMM,,,UNK,,,BLOOD,,CLIN LAB,,,K. pneu,,8,,,,,,S,0,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,0.345301,32.584359,Unspecified,,,Uganda,AFR,2018,2017,2017,12,MULTI,HC - ACUTE,COMM,,,UNK,,,BLOOD,,CLIN LAB,,,K. pneu,S,10,,,0,,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,-15.389645,28.32177,Unspecified,,,Zambia,AFR,2018,2017,2017,12,SINGLE,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,E. coli,S,78,,,,,0,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2017-2018,27,-15.389645,28.32177,Unspecified,,,Zambia,AFR,2018,2017,2017,12,SINGLE,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,K. pneu,R,58,6.9,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,30.0444,31.2357,Unspecified,,,Egypt,EMR,2020,2018,2018,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,E. coli,,45,,,,,,R,11.1,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,30.0444,31.2357,Unspecified,,,Egypt,EMR,2020,2018,2018,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,E. coli,R,141,,,,38.3,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,30.0444,31.2357,Unspecified,,,Egypt,EMR,2020,2018,2018,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,K. pneu,R,388,,,,71.4,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,8.97875,38.752726,Unspecified,,,Ethiopia,AFR,2020,2018,2018,12,MULTI,HC - ACUTE,COMM,,,UNK,,,URINE,,CLIN LAB,,,E. coli,R,170,,,,5.3,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,8.97875,38.752726,Unspecified,,,Ethiopia,AFR,2020,2018,2018,12,MULTI,HC - ACUTE,COMM,,,UNK,,,BLOOD,URINE,CLIN LAB,,,K. pneu,R,102,,,,28.4,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,-18.875931,47.516622,Unspecified,,,Madagascar,AFR,2020,2018,2018,12,MULTI,HC - UNK,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,E. coli,S,262,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,-18.875931,47.516622,Unspecified,,,Madagascar,AFR,2020,2018,2018,12,MULTI,HC - UNK,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,K. pneu,S,82,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,12.637681,-8.003077,Unspecified,,,Mali,AFR,2020,2018,2018,12,MULTI,HC - UNK,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,E. coli,R,132,18.2,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,12.637681,-8.003077,Unspecified,,,Mali,AFR,2020,2018,2018,12,MULTI,HC - UNK,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,K. pneu,R,41,17.1,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,-25.970959,32.571542,Unspecified,,,Mozambique,AFR,2020,2018,2018,12,SINGLE,HC - ACUTE,,,,UNK,,,BLOOD,,CLIN LAB,,,K. pneu,S,19,,,,0,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,7.146967,3.36572,Unspecified,,,Nigeria,AFR,2020,2018,2018,12,MULTI,HC - ACUTE,COMM,,,UNK,,,BLOOD,,CLIN LAB,,,E. coli,R,29,,,,6.9,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,7.146967,3.36572,Unspecified,,,Nigeria,AFR,2020,2018,2018,12,MULTI,HC - ACUTE,COMM,,,UNK,,,BLOOD,,CLIN LAB,,,K. pneu,,17,,,,,,S,0,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,7.146967,3.36572,Unspecified,,,Nigeria,AFR,2020,2018,2018,12,MULTI,HC - ACUTE,COMM,,,UNK,,,BLOOD,,CLIN LAB,,,K. pneu,R,35,,,,42.9,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2020,2018,2018,12,MULTI,HC - ACUTE,COMM,,,UNK,,,BLOOD,,CLIN LAB,,,E. coli,R,3600,,,0.6,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,-33.9249,18.4241,Unspecified,,,South Africa,AFR,2020,2018,2018,12,MULTI,HC - ACUTE,COMM,,,UNK,,,BLOOD,,CLIN LAB,,,K. pneu,R,5369,,,11.3,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,15.5007,32.5599,Unspecified,,,Sudan,EMR,2020,2018,2018,12,MULTI,HC - ACUTE,COMM,,,UNK,,,BLOOD,URINE,CLIN LAB,,,E. coli,R,326,,,10.7,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,15.5007,32.5599,Unspecified,,,Sudan,EMR,2020,2018,2018,12,MULTI,HC - ACUTE,COMM,,,UNK,,,BLOOD,URINE,CLIN LAB,,,K. pneu,R,216,,,6.5,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2020,2018,2018,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,E. coli,,26,,,,,,R,0.3,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2020,2018,2018,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,E. coli,R,9485,0.5,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2020,2018,2018,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,K. pneu,,291,,,,,,R,3.4,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,36.8065,10.1815,Unspecified,,,Tunisia,EMR,2020,2018,2018,12,MULTI,HC - ACUTE,,,,UNK,,,BLOOD,URINE,CLIN LAB,,,K. pneu,R,2742,12.8,,,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,0.345301,32.584359,Unspecified,,,Uganda,AFR,2020,2018,2018,12,MULTI,HC - ACUTE,COMM,,,UNK,,,URINE,,CLIN LAB,,,E. coli,,61,,,,,,R,16.4,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,0.345301,32.584359,Unspecified,,,Uganda,AFR,2020,2018,2018,12,MULTI,HC - ACUTE,COMM,,,UNK,,,URINE,,CLIN LAB,,,E. coli,R,61,,,14.8,14.8,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,0.345301,32.584359,Unspecified,,,Uganda,AFR,2020,2018,2018,12,MULTI,HC - ACUTE,COMM,,,UNK,,,BLOOD,,CLIN LAB,,,K. pneu,,12,,,,,,R,25,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
WHO 2020,1,0.345301,32.584359,Unspecified,,,Uganda,AFR,2020,2018,2018,12,MULTI,HC - ACUTE,COMM,,,UNK,,,BLOOD,,CLIN LAB,,,K. pneu,R,12,,,,25,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,WHO
Wilmore et al. 2017,792,-17.8252,31.0335,,Harare,,Zimbabwe,AFR,2017,2014,2015,10,SINGLE,HC - LONG,,,HIV+,CHILD,,,STOOL,,SURVEILLANCE,,,E. coli,S,23,,,,0,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Yagoubat et al. 2017,87,31.9527,5.3335,University Hospital of Mohamed Boudiaf,Ouargla,Ouargla Province,Algeria,AFR,2017,2014,2015,9,SINGLE,HC - ACUTE,,,Colonized,UNK,,,STOOL,,SURVEILLANCE,,Drug - Carbapenem - R,E. coli,,1,,,,,,S,0,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Yagoubat et al. 2017,87,27.6761,-8.1277,,Ouargla,,Algeria,AFR ,2017,2014,2015,9,SINGLE,HC - ACUTE,,,,UNK,,,STOOL,,SURVEILLANCE,,,E. coli,R,1,,,,,,,,N,,,,,,,,,,,,,,,,,,,Y,,,,,,,,,,,,,,,,,,
Yagoubat et al. 2017,87,31.9527,5.3335,University Hospital of Mohamed Boudiaf,Ouargla,Ouargla Province,Algeria,AFR,2017,2014,2015,9,SINGLE,HC - ACUTE,,,Colonized,UNK,,,STOOL,,SURVEILLANCE,,Drug - Carbapenem - R,K. pneu,,1,,,,,,S,0,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Yagoubat et al. 2017,87,27.6761,-8.1277,,Ouargla,,Algeria,AFR ,2017,2014,2015,9,SINGLE,HC - ACUTE,,,,UNK,,,STOOL,,SURVEILLANCE,,,K. pneu,R,1,,,,,,,,N,,,,,,,,,,,,,,,,,,,Y,,,,,,,,,,,,,,,,,,
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Yanat et al. 2016,90,35.693177,-0.63902,University Hospital of Oran,Oran,Oran Province,Algeria,AFR,2016,2011,2011,1,SINGLE,COMM,,,Infertile,ADULT,,,SPERM,,CLIN LAB,,Drug - Colistin - R,E. coli,S,1,,,,,0,R,100,N,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,Y,,,,,,,,Web of Science
Yanat et al. 2017,89,36.7509,5.0567,Unspecified,Bejaia,Béjaïa Province,Algeria,AFR,2017,2010,2014,48,MULTI,COMM,,,,UNK,,,MULTI,,CLIN LAB,,Gene - PMQR+,E. coli,S,13,0,,,,,S,0,N,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Yanat et al. 2017,89,36.7509,5.0567,Unspecified,Bejaia,Béjaïa Province,Algeria,AFR,2017,2010,2014,48,MULTI,COMM,,,,UNK,,,MULTI,,CLIN LAB,,Gene - PMQR+,K. pneu,S,2,0,,,,,S,0,N,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Web of Science
Yandai et al. 2014,140,12.1348,15.0557,,N'Djamena,,Chad,AFR,2014,2012,2013,8,SINGLE,HC - ACUTE,COMM,,,ALL,,,STOOL,,CLIN LAB,,Enzyme - ESBL+ ,E. coli,S,56,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
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Yandai et al. 2019,141,12.142698,15.061983,Mother and Child Hospital,N'Djamena,N'Djamena Region,Chad,AFR,2019,2014,2016,31,SINGLE,HC - ACUTE,,,UTI,UNK,,,URINE,,CLIN LAB,,,K. pneu,S,23,,,0,,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,African Journals Online - International Journal of Biological and Chemical Sciences
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Younus et al. 2011,197,30.449283,30.87075,Unspecified,,Menofia Governorate,Egypt,EMR,2011,,,,MULTI,HC - ACUTE,,,Cirrhosis; Peritonitis,ADULT,,,ASCITIC FLUID,,CASE SERIES,,,E. coli,R,31,,,,10,,,,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
Younus et al. 2011,197,30.449283,30.87075,Unspecified,,Menofia Governorate,Egypt,EMR,2011,,,,MULTI,HC - ACUTE,,,Cirrhosis; Peritonitis,ADULT,,,ASCITIC FLUID,,CASE SERIES,,,K. spp,R,8,,,,15,,,,N,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Global Health
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Zafer et al. 2019,201,30.025919,31.230546,National Cancer Institute Cairo University,Cairo,Cairo Governorate,Egypt,EMR,2019,2016,2017,18,SINGLE,HC - ACUTE,,,Cancer,ALL,,,MULTI,,CLIN LAB,,Drug - Colistin - R,E. coli,R,18,,,,33.3,,R,,N,N,,,,N,,N,,,,Y,,,,,,,,Y,,,,N,,,,,,Y,N,,,,,Y,,Global Health
Zafer et al. 2019,201,30.025919,31.230546,National Cancer Institute Cairo University,Cairo,Cairo Governorate,Egypt,EMR,2019,2016,2017,18,SINGLE,HC - ACUTE,,,Cancer,ALL,,,MULTI,,CLIN LAB,,,K. pneu,R,234,,,,,,R,9,N,N,,,,,,,,,,Y,,,,,,,,Y,,,,,,,,,,Y,,,,,,Y,Y,Global Health
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Zorgani et al. 2017,378,32.8872,13.1913,Tripoli Medical Centre; Tripoli Pediatric Hospital,Tripoli,Greater Tripoli Region,Libya,EMR,2017,2013,2014,24,MULTI,HC - ACUTE,,,,ALL,,,MULTI,,CLIN LAB,,,K. pneu,R,76,73,,47,51,,S,0,Y,Y,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Embase
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Zowawi et al. 2018,205,30.0444,31.2357,Unspecified,,,Egypt,EMR,2018,,,,UNK,HC - ACUTE,,,,UNK,,,UNK,,CLIN LAB,,Drug - MDR,K. pneu,R,4,,,,,,,,N,,,,,,,,,,,Y,,,,,,,,Y,,,,,,,,,,,,,,,,,,Embase