LOCUS vPhoP 3749 bp DNA linear 04-JAN-2022 DEFINITION . ACCESSION VERSION SOURCE . ORGANISM . COMMENT vOmpR2 from 1 to 1307 COMMENT vOmpR from 1 to 1543 COMMENT COMMENT ApEinfo:methylated:1 FEATURES Location/Qualifiers misc_feature 670..673 /locus_tag="PhoP box" /label="PhoP box" /ApEinfo_label="PhoP box" /ApEinfo_fwdcolor="#fb3471" /ApEinfo_revcolor="#68233e" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" CDS complement(2226..2884) /note="pLannotate" /database="addgene" /identity="99.545" /match_length="100.0" /fragment="False" /other="CDS" /locus_tag="CmR" /label="CmR" /ApEinfo_label="CmR" /ApEinfo_fwdcolor="#e9d024" /ApEinfo_revcolor="#e9d024" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" mobile_element complement(3109..3251) /note="pLannotate" /database="addgene" /identity="100.0" /match_length="18.75" /fragment="True" /other="mobile element" /locus_tag="insertion sequence:IS1" /label="insertion sequence:IS1" /ApEinfo_label="insertion sequence:IS1" /ApEinfo_fwdcolor="pink" /ApEinfo_revcolor="pink" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" misc_feature join(402..652,670..749) /locus_tag="pMgrb" /label="pMgrb" /ApEinfo_label="pMgrb" /ApEinfo_fwdcolor="#6e10ff" /ApEinfo_revcolor="#ffdaab" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" rep_origin complement(1..309) /note="pLannotate" /database="addgene" /identity="100.0" /match_length="100.0" /fragment="False" /other="rep_origin" /locus_tag="p15A ori" /label="p15A ori" /ApEinfo_label="p15A ori" /ApEinfo_fwdcolor="#999999" /ApEinfo_revcolor="#999999" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" rep_origin complement(3514..3749) /note="pLannotate" /database="addgene" /identity="100.0" /match_length="100.0" /fragment="False" /other="rep_origin" /locus_tag="p15A ori(1)" /label="p15A ori(1)" /ApEinfo_label="p15A ori" /ApEinfo_fwdcolor="#999999" /ApEinfo_revcolor="#999999" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" promoter 1673..1692 /note="pLannotate" /database="addgene" /identity="100.0" /match_length="20.588235294117645" /fragment="True" /other="promoter" /locus_tag="cat promoter" /label="cat promoter" /ApEinfo_label="cat promoter" /ApEinfo_fwdcolor="#346ee0" /ApEinfo_revcolor="#346ee0" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" misc_feature 653..658 /locus_tag="PhoP box(1)" /label="PhoP box(1)" /ApEinfo_label="PhoP box" /ApEinfo_fwdcolor="#fb4486" /ApEinfo_revcolor="#681017" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" promoter complement(2886..2987) /note="pLannotate" /database="addgene" /identity="99.029" /match_length="100.0" /fragment="False" /other="promoter" /locus_tag="cat promoter(1)" /label="cat promoter(1)" /ApEinfo_label="cat promoter" /ApEinfo_fwdcolor="#346ee0" /ApEinfo_revcolor="#346ee0" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" rep_origin complement(3371..3425) /note="pLannotate" /database="addgene" /identity="100.0" /match_length="7.466666666666668" /fragment="True" /other="rep_origin" /locus_tag="RSF ori" /label="RSF ori" /ApEinfo_label="RSF ori" /ApEinfo_fwdcolor="#999999" /ApEinfo_revcolor="#999999" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" misc_feature 653..669 /locus_tag="pMgrb(1)" /label="pMgrb(1)" /ApEinfo_label="pMgrb" /ApEinfo_fwdcolor="#6e10ff" /ApEinfo_revcolor="#ffdaab" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" terminator complement(1564..1657) /note="pLannotate" /database="addgene" /identity="100.0" /match_length="100.0" /fragment="False" /other="terminator" /locus_tag="lambda t0 terminator" /label="lambda t0 terminator" /ApEinfo_label="lambda t0 terminator" /ApEinfo_fwdcolor="#9d1b1c" /ApEinfo_revcolor="#9d1b1c" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" ncRNA 1882..1996 /note="pLannotate" /database="infernal" /identity="100.0" /match_length="97.47899159663865" /fragment="False" /other="ncRNA" /locus_tag="5S rRNA" /label="5S rRNA" /ApEinfo_label="5S rRNA" /ApEinfo_fwdcolor="pink" /ApEinfo_revcolor="pink" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" misc_feature 653..669 /locus_tag="PhoP box (Regulon DB)" /label="PhoP box (Regulon DB)" /ApEinfo_label="PhoP box (Regulon DB)" /ApEinfo_fwdcolor="#fc65e1" /ApEinfo_revcolor="green" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" terminator 2001..2065 /note="pLannotate" /database="addgene" /identity="100.0" /match_length="91.66666666666666" /fragment="True" /other="terminator" /locus_tag="rrnB T1 terminator" /label="rrnB T1 terminator" /ApEinfo_label="rrnB T1 terminator" /ApEinfo_fwdcolor="#9d1b1c" /ApEinfo_revcolor="#9d1b1c" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" CDS 786..1498 /note="pLannotate" /database="addgene" /identity="100.0" /match_length="100.0" /fragment="False" /other="CDS" /locus_tag="GFP" /label="GFP" /ApEinfo_label="GFP" /ApEinfo_fwdcolor="#e9d024" /ApEinfo_revcolor="#e9d024" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" CDS 1713..1741 /note="pLannotate" /database="addgene" /identity="100.0" /match_length="100.0" /fragment="False" /other="CDS" /locus_tag="Myc" /label="Myc" /ApEinfo_label="Myc" /ApEinfo_fwdcolor="#e9d024" /ApEinfo_revcolor="#e9d024" /ApEinfo_graphicformat="arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0" ORIGIN 1 atgcacgaac cccccgttca gtccgaccgc tgcgccttat ccggtaacta tcgtcttgag 61 tccaacccgg aaagacatgc aaaagcacca ctggcagcag ccactggtaa ttgatttaga 121 ggagttagtc ttgaagtcat gcgccggtta aggctaaact gaaaggacaa gttttggtga 181 ctgcgctcct ccaagccagt tacctcggtt caaagagttg gtagctcaga gaaccttcga 241 aaaaccgccc tgcaaggcgg ttttttcgtt ttcagagcaa gagattacgc gcagaccaaa 301 acgatctcaa gaagatcatc ttattaatca gataaaatat ttctagattt cagtgcaatt 361 tatctcttca aatgtagcac ctgaagtcgg atcgcggccg cgcgaattca ccgtgctggt 421 gcctctggca gtcagatagg tacattgcaa acctaatcct gcggcattct ctttgcttcc 481 aatcaaaacg ccatatccgc tgagtaataa tcctatccat accagtgcta tcagcataac 541 tgtgcgaatg atgaatcgca ttacaacctc ttctcttttt atgttcgctt aatcgtagcg 601 gcaatatgcg ctgaagcaag cgactcattc cgaaaaagca cgaatatcga caTAGTTAGG 661 CGCTGTTTAa ctaacgcatg ctagtttaat gacataaggt aggtgaaacg gatccccggg 721 tacctagaat taaagaggag aaattaagcg gatcctctgt ttattttcag gagtcatcat 781 tatttatgag taaaggagaa gaacttttca ctggagttgt cccaattctt gttgaattag 841 atggtaatgt taatgggcac aaattttctg tcagtggaga gggtgaaggt gatgcagcat 901 acggaaaact tacccttaaa tttatttgca ctactggaaa actacctgtt ccatggccaa 961 cacttgtcac tactttgact tatggtgttc aatgcttttc aagataccca gatcatatga 1021 aacggcatga ctttttcaag agtgccatgc ccgaaggtta tgtacaggaa agaactatat 1081 ttttcaaaga tgacgggaac tataagacac gtgctgaagt caagtttgaa ggtgatacac 1141 ttgttaatag aatcgagtta aaaggtattg attttaaaga agatggaaac attcttggac 1201 acaagttgga atacaactat aactcacaca atgtatacat catggcagac aaacaaaaga 1261 atggaatcaa agttaacttc aaaattagac acaacattga agatggaagc gttcaactag 1321 cagaccatta tcaacaaaat actccaattg gcgatggccc tgtcctttta ccagacaacc 1381 attacctgtc cacacaatct gccctttcga aagatcccaa cgaaaagaga gaccacatgg 1441 tccttcttga gtttgtaaca gctgctggga ttacacatgg catggatgaa ctatacaaaa 1501 ggcctgcagc aaacgacgaa aactacgctt aagtagctta ataagcttaa ttagctgagc 1561 ttggactcct gttgatagat ccagtaatga cctcagaact ccatctggat ttgttcagaa 1621 cgctcggttg ccgccgggcg ttttttattg gtgagaatcc aagctagctt ggcgagattt 1681 tcaggagcta agggaattcg aagcttgggc ccgaacaaaa actcatctca gaagaggatc 1741 tgaatagcgc cgtcgaccat catcatcatc atcattgagt ttaaacggtc tccagcttgg 1801 ctgttttggc ggatgagaga agattttcag cctgatacag attaaatcag aacgcagaag 1861 cggtctgata aaacagaatt tgcctggcgg cagtagcgcg gtggtcccac ctgaccccat 1921 gccgaactca gaagtgaaac gccgtagcgc cgatggtagt gtggggtctc cccatgcgag 1981 agtagggaac tgccaggcat caaataaaac gaaaggctca gtcgaaagac tgggcctttc 2041 gttttatctg ttgtttgtcg gtgaactaat tcgaagcttg acataagcgg ctatttaacg 2101 accctgccct gaaccgacga ccgggtcgaa tttgctttcg aatttctgcc attcatccgc 2161 ttattatcac ttattcaggc gtagcaacca ggcgtttaag ggcaccaata actgccttaa 2221 aaaaattacg ccccgccctg ccactcatcg cagtactgtt gtaattcatt aagcattctg 2281 ccgacatgga agccatcaca aacggcatga tgaacctgaa tcgccagcgg catcagcacc 2341 ttgtcgcctt gcgtataata tttgcccatc gtgaaaacgg gggcgaagaa gttgtccata 2401 ttggccacgt ttaaatcaaa actggtgaaa ctcacccagg gattggctga gacgaaaaac 2461 atattctcaa taaacccttt agggaaatag gccaggtttt caccgtaaca cgccacatct 2521 tgcgaatata tgtgtagaaa ctgccggaaa tcgtcgtggt attcactcca gagcgatgaa 2581 aacgtttcag tttgctcatg taaaacggtg taacaagggt gaacactatc ccatatcacc 2641 agctcaccgt ctttcattgc catacggaac tccggatgag cattcatcag gcgggcaaga 2701 atgtggataa aggccggata aaacttgtgc ttatttttct ttacggtctt taaaaaggcc 2761 gtaatatcca gctgaacggt ctggttatag gtacattgag caactgactg aaatgcctca 2821 aaatgttctt tacgatgcca ttgggatata tcaacggtgg tatatccagt gatttttttc 2881 tccattttag cttccttagc tcctgaaaat ctcgataact caaaaaatat gcccggtagt 2941 gatcttattt cattatggtg aaagttggaa cctcttacgt gccgatcaac gtctcatttt 3001 cgccaaaagt tggcccaggg cttcccggta tcaacaggga caccaggatt tatttattct 3061 gcgaagtgat cttccgtcac aggtatttat tcggcgcaaa gtgcgtcggg tgatgctgcc 3121 aacttactga tttagtgtat gatggtgttt ttgaggtgct ccagtggctt ctgtttctat 3181 cagctgtccc tcctgttcag ctactgacgg ggtggtgcgt aacggcaaaa gcaccgccgg 3241 acatcagcgc tagcggagtg tatactggct tactatgttg gcactgatga gagtgtcagt 3301 gaagtgcttc atgtggcagg agaaaaaagg ctgcaccggt gcgtcagcag aatatgtgat 3361 acaggatata ttccgcttcc tcgctcactg actcgctacg ctcggtcgtt cgactgcggc 3421 gagcggaaat ggcttacgaa cggggcggag atttcctgga agatgccagg aagatactta 3481 acagggaagt gagagggccg cggcaaagcc gtttttccat aggctccgcc cccctgacaa 3541 gcatcacgaa atctgacgct caaatcagtg gtggcgaaac ccgacaggac tataaagata 3601 ccaggcgttt ccccctggcg gctccctcgt gcgctctcct gttcctgcct ttcggtttac 3661 cggtgtcatt ccgctgttat ggccgcgttt gtctcattcc acgcctgaca ctcagttccg 3721 ggtaggcagt tcgctccaag ctggactgt //