Table S2. ICB Treated Cohort Clinical and Tumor Mutation Summaries,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
sampleIDs,TumorType,Cohort,IMMS(rank<0.0001)_HLAII,IMMS(rank<0.001)_HLAII,IMMS(rank<0.01)_HLAII,MANA(rank<0.0001)_HLAII,MANA(rank<0.001)_HLAII,MANA(rank<0.01)_HLAII,clonal_IMMs,subclonal_IMMs,IMM_het,IMMs_clonality_not_evaluated,TMB,clonal_TMB,subclonal_TMB,IMMS(rank<0.001)_HLAI,MANA(rank<0.001)_HLAI,HLAI&II_shared_IMMs,clinical_benefit,PFS,PFS_censor,OS,OS_censor,DQA_hetero,DQB_hetero,HLA-A_HOM,HLA-A_alleles,HLA-B_HOM,HLA-B_alleles,HLA-C_HOM,HLA-C_alleles,HLA-DPA1_alleles,HLA-DPA_HOM,HLA-DPB1_alleles,HLA-DPB_HOM,HLA-DQA1_alleles,HLA-DQA_HOM,HLA-DQB1_alleles,HLA-DQB_HOM,HLA-DRB1_alleles,HLA-DRB_HOM,PD-L1_categorical,PD-L1_staining,age,num_forbidden_alleles,smoking_categorical,smoking_status,Treatment,IMMs_Expressed_Pre_tx,IMMs_Expressed_On_tx
20001,Melanoma,Anagnostou,10,78,416,26,360,4179,75,2,0.025641026,1,830,782,31,161,228,23,Responding,7.2279,1,10.152,1,TRUE,TRUE,FALSE,HLA-A24:02;HLA-A29:02,FALSE,HLA-B39:06;HLA-B44:03,FALSE,HLA-C07:02;HLA-C16:01,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*02:01;DQA1*04:01:01,FALSE,DQB1*02:02;DQB1*04:02,FALSE,DRB1*08:01;DRB1*07:01,FALSE,,,77,0,,,NIV1+IPI3,13,15
20002,Melanoma,Anagnostou,31,247,1278,78,1022,13259,235,8,0.032388664,4,2747,2586,83,427,666,85,Responding,20.271,0,25.2977,0,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A29:02,FALSE,HLA-B38:01;HLA-B45:01,FALSE,HLA-C06:02;HLA-C12:03,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*20:01,FALSE,DQA1*01:03:01;DQA1*03:03:01,FALSE,DQB1*03:01;DQB1*06:03,FALSE,DRB1*13:01;DRB1*04:01,FALSE,,,66,2,,,NIV1+IPI3,24,0
20007,Melanoma,Anagnostou,0,25,154,0,83,1555,22,0,0,3,388,363,0,50,74,3,Responding,12.4517,0,27.9589,0,FALSE,TRUE,FALSE,HLA-A01:01;HLA-A25:01,FALSE,HLA-B18:01;HLA-B40:01,FALSE,HLA-C07:01;HLA-C12:03,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*16:01,FALSE,DQA1*01:02:01,TRUE,DQB1*06:02;DQB1*06:04,FALSE,DRB1*15:01;DRB1*13:02,FALSE,,,67,0,,,NIV1+IPI3,9,1
20008,Melanoma,Anagnostou,5,33,173,13,105,1450,30,2,0.060606061,1,309,297,8,45,58,8,Responding,4.1725,1,25.6591,0,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A02:01,FALSE,HLA-B37:01;HLA-B40:01,FALSE,HLA-C03:04;HLA-C06:02,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*02:01;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*02:02,FALSE,DRB1*07:01;DRB1*04:01,FALSE,,,48,0,,,NIV1+IPI3,12,7
20010,Melanoma,Anagnostou,8,67,317,36,409,4113,63,2,0.029850746,2,713,667,22,110,157,22,Responding,9.692,0,24.6078,0,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A02:01,FALSE,HLA-B37:01;HLA-B44:02,FALSE,HLA-C05:01;HLA-C06:02,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*10:01;DPB1*02:01,FALSE,DQA1*01:01:01;DQA1*01:02:01,FALSE,DQB1*06:02;DQB1*05:01,FALSE,DRB1*15:01;DRB1*01:01,FALSE,,,71,0,,,NIV1+IPI3,18,0
20011,Melanoma,Anagnostou,2,13,79,2,39,710,11,1,0.076923077,1,162,140,13,25,39,4,Non-Responding,1.4127,1,7.885,0,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A24:02,FALSE,HLA-B49:01;HLA-B51:01,FALSE,HLA-C05:01;HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*20:01,FALSE,DQA1*05:05:01;DQA1*01:03:01,FALSE,DQB1*03:01;DQB1*06:03,FALSE,DRB1*11:04;DRB1*13:01,FALSE,,,56,2,,,NIV1+IPI3,2,0
20014,Melanoma,Anagnostou,6,41,190,34,185,2242,37,2,0.048780488,2,435,390,30,78,136,10,Responding,23.9507,0,37.5852,0,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A30:02,FALSE,HLA-B15:16;HLA-B44:03,FALSE,HLA-C14:02;HLA-C16:01,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*02:01;DPB1*17:01,FALSE,DQA1*01:02:01;DQA1*01:02:02,FALSE,DQB1*02:02;DQB1*05:01,FALSE,DRB1*07:01;DRB1*13:02,FALSE,,,66,2,,,NIV1+IPI3,12,0
20018,Melanoma,Anagnostou,1,3,17,5,25,182,3,0,0,0,44,36,8,6,6,0,Non-Responding,1.6427,1,24.0821,1,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A03:01,FALSE,HLA-B07:02;HLA-B51:01,FALSE,HLA-C07:02;HLA-C15:02,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*04:02,FALSE,DQA1*04:01:01;DQA1*01:02:01,FALSE,DQB1*06:02;DQB1*04:02,FALSE,DRB1*15:01;DRB1*08:01,FALSE,,,60,0,,,NIV1+IPI3,0,2
20019,Melanoma,Anagnostou,0,1,10,0,2,95,1,0,0,0,21,21,0,4,6,0,Responding,18.0698,0,30.7187,0,TRUE,TRUE,FALSE,HLA-A25:01;HLA-A68:01,FALSE,HLA-B18:01;HLA-B35:03,FALSE,HLA-C04:01;HLA-C12:03,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*23:01,FALSE,DQA1*01:02:01;DQA1*03:01:01,FALSE,DQB1*06:02;DQB1*03:02,FALSE,DRB1*15:01;DRB1*08:01,FALSE,,,80,2,,,NIV1+IPI3,1,0
20021,Melanoma,Anagnostou,5,32,149,14,172,1633,29,2,0.0625,1,338,317,12,47,86,11,Responding,34.1027,0,34.1027,0,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A11:01,FALSE,HLA-B08:01;HLA-B35:01,FALSE,HLA-C04:01;HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*01:01,FALSE,DQA1*01:01:01;DQA1*05:01:01,FALSE,DQB1*05:01;DQB1*02:01,FALSE,DRB1*01:01;DRB1*03:01,FALSE,,,64,2,,,NIV1+IPI3,9,8
20023,Melanoma,Anagnostou,9,155,794,30,547,7718,145,6,0.038709677,4,1394,1288,62,147,217,27,Responding,23.3922,0,33.8727,0,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A30:01,FALSE,HLA-B07:02;HLA-B13:02,FALSE,HLA-C06:02;HLA-C07:02,DPA1*02:01:01,TRUE,DPB1*17:01;DPB1*14:01,FALSE,DQA1*02:01;DQA1*03:03:01,FALSE,DQB1*03:01;DQB1*02:02,FALSE,DRB1*07:01;DRB1*04:01,FALSE,,,52,0,,,NIV1+IPI3,48,0
20025,Melanoma,Anagnostou,7,89,399,10,329,3944,81,4,0.04494382,4,740,687,31,131,184,28,Non-Responding,1.2156,1,25.2977,0,TRUE,TRUE,FALSE,HLA-A11:01;HLA-A33:01,FALSE,HLA-B44:03;HLA-B51:01,FALSE,HLA-C02:02;HLA-C03:03,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*01:01:02;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*05:01,FALSE,DRB1*01:02;DRB1*04:01,FALSE,,,72,2,,,NIV1+IPI3,29,25
20034,Melanoma,Anagnostou,1,31,141,1,101,1691,31,0,0,0,322,303,9,53,74,14,Responding,5.1253,0,23.4251,0,TRUE,TRUE,TRUE,HLA-A01:01,FALSE,HLA-B08:01;HLA-B57:01,FALSE,HLA-C06:02;HLA-C07:01,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*02:01;DPB1*14:01,FALSE,DQA1*01:01:01;DQA1*02:01,FALSE,DQB1*03:03;DQB1*05:01,FALSE,DRB1*01:01;DRB1*07:01,FALSE,,,50,1,,,NIV1+IPI3,10,5
20035,Melanoma,Anagnostou,0,1,7,0,1,60,0,1,1,0,9,5,3,2,3,1,Non-Responding,2.7926,1,19.8768,0,TRUE,TRUE,TRUE,HLA-A24:02,FALSE,HLA-B08:01;HLA-B51:01,FALSE,HLA-C07:01;HLA-C15:02,DPA1*01:03:01,TRUE,DPB1*104:01;DPB1*04:02,FALSE,DQA1*05:05:01;DQA1*03:01:01,FALSE,DQB1*03:01;DQB1*03:02,FALSE,DRB1*13:03;DRB1*04:03,FALSE,,,60,0,,,NIV1+IPI3,,
20037,Melanoma,Anagnostou,0,3,31,0,21,192,,3,,,71,,,9,14,1,Non-Responding,1.2156,1,23.1294,1,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A03:01,FALSE,HLA-B35:01;HLA-B51:01,FALSE,HLA-C04:01;HLA-C15:02,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:02,FALSE,DQA1*01:01:01;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*05:01,FALSE,DRB1*01:01;DRB1*04:04,FALSE,,,57,2,,,NIV1+IPI3,1,1
20038,Melanoma,Anagnostou,1,3,16,1,6,153,1,1,0.333333333,1,38,33,2,5,8,1,Non-Responding,1.4127,1,35.7782,0,TRUE,TRUE,FALSE,HLA-A29:02;HLA-A68:02,FALSE,HLA-B44:03;HLA-B53:01,FALSE,HLA-C04:01;HLA-C16:01,DPA1*02:01:01,TRUE,DPB1*01:01,TRUE,DQA1*01:03:01;DQA1*05:01:01,FALSE,DQB1*06:03;DQB1*02:01,FALSE,DRB1*13:01;DRB1*03:01,FALSE,,,54,2,,,NIV1+IPI3,1,1
20039,Melanoma,Anagnostou,0,11,61,0,25,518,10,1,0.090909091,0,162,141,18,26,30,2,Non-Responding,0.7556,1,0.7556,1,TRUE,TRUE,FALSE,HLA-A24:02;HLA-A33:03,FALSE,HLA-B35:01;HLA-B40:06,FALSE,HLA-C04:01;HLA-C15:02,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*15:01,FALSE,DQA1*01:01:01;DQA1*01:02,FALSE,DQB1*06:03;DQB1*05:01,FALSE,DRB1*15:01;DRB1*01:01,FALSE,,,54,0,,,NIV1+IPI3,4,0
20041,Melanoma,Anagnostou,12,160,856,36,661,8849,145,6,0.0375,9,1914,1707,78,263,388,41,Responding,25.3963,0,26.6776,0,FALSE,TRUE,FALSE,HLA-A02:01;HLA-A02:06,FALSE,HLA-B27:05;HLA-B40:01,FALSE,HLA-C03:03;HLA-C03:04,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*06:01,FALSE,DQA1*01:02:01,TRUE,DQB1*06:02;DQB1*06:04,FALSE,DRB1*15:01;DRB1*13:02,FALSE,,,56,0,,,NIV1+IPI3,40,0
30002,Melanoma,Anagnostou,1,9,51,7,50,546,,9,,,100,,,13,17,1,Responding,7.2936,0,24.3121,0,TRUE,TRUE,FALSE,HLA-A02:05;HLA-A03:01,FALSE,HLA-B44:02;HLA-B49:01,FALSE,HLA-C07:01;HLA-C07:04,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*04:01;DPB1*09:01,FALSE,DQA1*01:02:01;DQA1*03:03:01,FALSE,DQB1*03:02;DQB1*06:04,FALSE,DRB1*04:05;DRB1*13:02,FALSE,,,38,2,,,NIV1+IPI3,1,1
30004,Melanoma,Anagnostou,0,6,20,0,22,179,6,0,0,0,38,32,6,5,7,2,Non-Responding,1.4127,1,26.5462,0,TRUE,TRUE,FALSE,HLA-A02:05;HLA-A68:01,FALSE,HLA-B07:02;HLA-B50:01,FALSE,HLA-C06:02;HLA-C07:02,DPA1*01:03:01;DPA1*02:02:02,FALSE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*02:01;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*02:02,FALSE,DRB1*07:01;DRB1*04:02,FALSE,,,61,0,,,NIV3,,
30010,Melanoma,Anagnostou,1,23,124,1,47,1064,17,5,0.217391304,1,299,279,14,40,63,3,Non-Responding,1.4456,1,11.7618,1,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A03:01,FALSE,HLA-B07:02;HLA-B14:02,FALSE,HLA-C07:02;HLA-C08:02,DPA1*01:03:01,TRUE,DPB1*104:01;DPB1*04:01,FALSE,DQA1*05:05:01;DQA1*01:02:01,FALSE,DQB1*03:01;DQB1*06:02,FALSE,DRB1*15:01;DRB1*04:05,FALSE,,,41,2,,,NIV3,7,6
30011,Melanoma,Anagnostou,0,1,6,0,1,86,1,0,0,0,16,7,5,2,4,0,Non-Responding,1.9384,1,26.5133,1,TRUE,FALSE,FALSE,HLA-A02:01;HLA-A32:01,FALSE,HLA-B08:01;HLA-B42:02,FALSE,HLA-C07:01;HLA-C17:01,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*02:01;DPB1*17:01,FALSE,DQA1*02:01;DQA1*05:01:01,FALSE,DQB1*02:02,TRUE,DRB1*07:01;DRB1*03:01,FALSE,,,50,0,,,NIV1+IPI3,,
30012,Melanoma,Anagnostou,0,13,110,0,38,853,11,1,0.076923077,1,167,139,14,14,23,0,Non-Responding,1.6756,0,18.5298,0,TRUE,TRUE,TRUE,HLA-A23:01,TRUE,HLA-B44:03,TRUE,HLA-C04:01,DPA1*02:01:01;DPA1*02:02:02,FALSE,DPB1*05:01,TRUE,DQA1*02:01;DQA1*03:02,FALSE,DQB1*03:03;DQB1*02:02,FALSE,DRB1*07:01;DRB1*13:01,FALSE,,,60,0,,,NIV1+IPI3,6,7
30019,Melanoma,Anagnostou,1,18,68,6,55,709,16,2,0.111111111,0,99,80,12,18,22,7,Non-Responding,3.0226,1,29.0103,0,TRUE,TRUE,FALSE,HLA-A24:02;HLA-A33:03,FALSE,HLA-B35:01;HLA-B40:06,FALSE,HLA-C04:01;HLA-C15:02,DPA1*01:03:01,TRUE,DPB1*06:01;DPB1*01:01,FALSE,DQA1*05:01:01;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*02:01,FALSE,DRB1*04:04;DRB1*03:01,FALSE,,,83,0,,,NIV1+IPI3,4,0
30020,Melanoma,Anagnostou,4,38,215,7,111,2100,34,3,0.078947368,1,492,462,16,63,81,10,Non-Responding,1.4127,1,26.0862,0,FALSE,TRUE,FALSE,HLA-A01:01;HLA-A02:01,FALSE,HLA-B08:01;HLA-B40:01,FALSE,HLA-C03:04;HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*04:01,FALSE,DQA1*01:02:01,TRUE,DQB1*06:02;DQB1*06:04,FALSE,DRB1*15:01;DRB1*13:02,FALSE,,,57,0,,,NIV1+IPI3,7,0
30022,Melanoma,Anagnostou,22,229,1054,76,928,11980,211,7,0.030567686,11,2301,2046,87,385,550,73,Responding,28.2875,0,29.4374,0,TRUE,TRUE,TRUE,HLA-A02:01,FALSE,HLA-B44:02;HLA-B49:01,FALSE,HLA-C05:01;HLA-C12:03,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*13:01;DPB1*04:01,FALSE,DQA1*01:02:01;DQA1*01:02:02,FALSE,DQB1*06:02;DQB1*05:02,FALSE,DRB1*15:01;DRB1*16:02,FALSE,,,52,0,,,NIV1+IPI3,57,0
30023,Melanoma,Anagnostou,2,19,65,7,77,793,18,1,0.052631579,0,132,117,5,18,24,6,Responding,29.0103,1,30.8172,0,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A02:01,FALSE,HLA-B18:01;HLA-B51:01,FALSE,HLA-C02:02;HLA-C07:01,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*11:01;DPB1*04:01,FALSE,DQA1*05:05:01;DQA1*02:01,FALSE,DQB1*03:01;DQB1*02:02,FALSE,DRB1*07:01;DRB1*11:01,FALSE,,,42,0,,,NIV1+IPI3,5,5
30028,Melanoma,Anagnostou,4,25,129,9,100,1366,22,0,0,3,248,228,3,33,48,3,Responding,28.3532,0,28.5832,0,TRUE,TRUE,TRUE,HLA-A01:01,FALSE,HLA-B37:01;HLA-B40:02,FALSE,HLA-C02:02;HLA-C06:02,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*02:01;DPB1*11:01,FALSE,DQA1*02:01;DQA1*01:03:01,FALSE,DQB1*06:03;DQB1*02:02,FALSE,DRB1*07:01;DRB1*13:01,FALSE,,,65,1,,,NIV1+IPI3,10,9
30030,Melanoma,Anagnostou,2,15,95,4,72,927,15,0,0,0,249,235,8,19,36,1,Responding,23.7207,0,28.5832,0,FALSE,FALSE,FALSE,HLA-A02:17;HLA-A68:02,FALSE,HLA-B14:02;HLA-B18:01,FALSE,HLA-C07:01;HLA-C08:02,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:02,FALSE,DQA1*05:05:01,TRUE,DQB1*03:01,TRUE,DRB1*11:04;DRB1*13:03,FALSE,,,45,0,,,NIV1+IPI3,3,0
30032,Melanoma,Anagnostou,1,9,30,2,35,430,8,0,0,1,80,71,6,11,18,3,Responding,10.5791,1,22.6694,1,TRUE,TRUE,FALSE,HLA-A23:01;HLA-A29:01,FALSE,HLA-B07:02;HLA-B14:01,FALSE,HLA-C07:02;HLA-C08:02,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*04:01,FALSE,DQA1*02:01;DQA1*04:01:01,FALSE,DQB1*03:03;DQB1*04:02,FALSE,DRB1*08:01;DRB1*07:01,FALSE,,,40,0,,,NIV3,4,4
30039,Melanoma,Anagnostou,4,28,164,9,108,1745,24,3,0.107142857,1,351,316,21,69,92,10,Responding,8.7721,1,28.0575,0,TRUE,TRUE,FALSE,HLA-A03:01;HLA-A31:01,FALSE,HLA-B35:02;HLA-B51:01,FALSE,HLA-C04:01;HLA-C15:02,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*02:01;DPB1*14:01,FALSE,DQA1*05:05:01;DQA1*01:03:01,FALSE,DQB1*03:01;DQB1*06:03,FALSE,DRB1*11:04;DRB1*13:01,FALSE,,,65,2,,,NIV3,6,0
30041,Melanoma,Anagnostou,0,1,8,0,2,54,1,0,0,0,17,12,5,4,4,1,Non-Responding,1.3142,1,6.6694,1,TRUE,TRUE,FALSE,HLA-A11:01;HLA-A25:01,FALSE,HLA-B18:01;HLA-B52:01,FALSE,HLA-C12:02;HLA-C12:03,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*05:05:01;DQA1*01:02:01,FALSE,DQB1*03:01;DQB1*06:16,FALSE,DRB1*15:01;DRB1*11:01,FALSE,,,76,2,,,NIV1+IPI3,1,1
30044,Melanoma,Anagnostou,1,28,139,1,101,1403,26,1,0.035714286,1,289,272,8,39,69,8,Responding,10.5462,1,19.0226,1,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A26:01,FALSE,HLA-B38:01;HLA-B57:01,FALSE,HLA-C06:02;HLA-C12:03,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*05:05:01;DQA1*02:01,FALSE,DQB1*03:01;DQB1*03:03,FALSE,DRB1*11:04;DRB1*07:01,FALSE,,,36,0,,,NIV1+IPI3,8,0
30049,Melanoma,Anagnostou,1,4,17,1,7,89,4,0,0,0,30,28,1,3,4,1,Non-Responding,1.347,1,22.8008,0,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A03:01,FALSE,HLA-B07:02;HLA-B37:01,FALSE,HLA-C06:02;HLA-C07:02,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*17:01;DPB1*04:01,FALSE,DQA1*02:01;DQA1*01:05,FALSE,DQB1*02:02;DQB1*05:01,FALSE,DRB1*07:01;DRB1*10:01,FALSE,,,62,1,,,NIV1+IPI3,3,3
30050,Melanoma,Anagnostou,6,51,231,10,209,2535,45,4,0.078431373,2,390,339,26,44,69,10,Responding,23.9836,0,24.2464,0,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A02:01,FALSE,HLA-B08:01;HLA-B15:01,FALSE,HLA-C03:04;HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*04:02,FALSE,DQA1*05:01:01;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*02:01,FALSE,DRB1*04:01;DRB1*03:01,FALSE,,,25,0,,,NIV3,11,12
30051,Melanoma,Anagnostou,0,12,119,0,30,843,12,0,0,0,216,203,3,39,54,4,Non-Responding,1.4456,1,18.694,1,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A11:01,FALSE,HLA-B40:01;HLA-B58:01,FALSE,HLA-C03:04;HLA-C05:01,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*03:02;DQA1*02:01,FALSE,DQB1*03:03;DQB1*02:02,FALSE,DRB1*09:01;DRB1*07:01,FALSE,,,43,0,,,NIV1+IPI3,5,5
30054,Melanoma,Anagnostou,9,43,190,27,197,2046,41,0,0,2,351,337,5,53,74,13,Responding,7.1951,0,21.2238,1,TRUE,TRUE,FALSE,HLA-A31:01;HLA-A68:01,FALSE,HLA-B15:01;HLA-B15:17,FALSE,HLA-C04:01;HLA-C07:01,DPA1*01:03:01;DPA1*02:02:02,FALSE,DPB1*05:01;DPB1*04:02,FALSE,DQA1*01:04:01;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*05:03,FALSE,DRB1*04:04;DRB1*11:13,FALSE,,,46,2,,,NIV1+IPI3,9,0
30055,Melanoma,Anagnostou,0,5,53,0,6,516,4,0,0,1,176,158,12,17,24,2,Non-Responding,4.9281,1,24.7392,0,FALSE,TRUE,FALSE,HLA-A03:01;HLA-A11:01,FALSE,HLA-B35:01;HLA-B40:01,FALSE,HLA-C04:01;HLA-C07:02,DPA1*01:03:01,TRUE,DPB1*03:01,TRUE,DQA1*01:01:01,TRUE,DQB1*03:01;DQB1*05:01,FALSE,DRB1*01:01;DRB1*04:01,FALSE,,,53,1,,,NIV3,1,1
30056,Melanoma,Anagnostou,6,105,482,10,310,4398,,105,,,845,,,90,127,26,Non-Responding,1.4127,1,1.4127,0,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A11:01,TRUE,HLA-B35:01,TRUE,HLA-C04:01,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*02:01;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*02:02,FALSE,DRB1*07:01;DRB1*04:04,FALSE,,,46,0,,,NIV3,36,39
30058,Melanoma,Anagnostou,0,1,8,0,8,89,0,1,1,0,19,14,2,6,9,0,Non-Responding,3.0226,1,20.9938,0,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A11:01,FALSE,HLA-B07:02;HLA-B52:01,FALSE,HLA-C12:02;HLA-C12:03,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*04:01;DPB1*14:01,FALSE,DQA1*01:03:01;DQA1*01:02:02,FALSE,DQB1*06:01;DQB1*05:02,FALSE,DRB1*15:01;DRB1*15:02,FALSE,,,60,0,,,NIV1+IPI3,,
40002,Melanoma,Anagnostou,0,8,45,0,30,418,5,3,0.375,0,84,68,13,15,26,4,Responding,4.6653,0,14.423,1,TRUE,TRUE,FALSE,HLA-A03:01;HLA-A26:01,FALSE,HLA-B35:01;HLA-B38:01,FALSE,HLA-C04:01;HLA-C12:03,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*10:01;DPB1*04:01,FALSE,DQA1*01:03:01;DQA1*03:03:01,FALSE,DQB1*03:01;DQB1*06:03,FALSE,DRB1*04:07;DRB1*13:01,FALSE,,,74,2,,,NIV3,3,3
40003,Melanoma,Anagnostou,11,46,260,31,224,2837,42,1,0.02173913,3,544,511,23,84,107,14,Responding,19.8439,0,29.2731,0,TRUE,TRUE,FALSE,HLA-A11:01;HLA-A32:01,FALSE,HLA-B18:01;HLA-B27:05,FALSE,HLA-C01:02;HLA-C07:01,DPA1*01:03:01;DPA1*02:02:02,FALSE,DPB1*05:01;DPB1*06:01,FALSE,DQA1*01:01:01;DQA1*01:02:01,FALSE,DQB1*06:02;DQB1*05:01,FALSE,DRB1*15:01;DRB1*01:01,FALSE,,,69,0,,,NIV3,11,0
40011,Melanoma,Anagnostou,5,36,185,14,150,2148,35,0,0,1,367,355,6,53,75,7,Responding,23.9507,0,24.1478,0,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A30:01,FALSE,HLA-B49:01;HLA-B51:01,FALSE,HLA-C07:01;HLA-C14:02,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*13:01;DPB1*02:01,FALSE,DQA1*01:03:01;DQA1*01:02:01,FALSE,DQB1*06:03;DQB1*06:04,FALSE,DRB1*13:02;DRB1*13:01,FALSE,,,67,0,,,NIV1+IPI3,0,4
40013,Melanoma,Anagnostou,3,49,293,7,190,2724,47,2,0.040816327,0,686,631,30,90,120,9,Responding,26.8747,0,26.8747,0,TRUE,FALSE,TRUE,HLA-A02:01,FALSE,HLA-B40:02;HLA-B44:02,FALSE,HLA-C02:02;HLA-C05:01,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*04:02,FALSE,DQA1*05:05:01;DQA1*03:03:01,FALSE,DQB1*03:01,TRUE,DRB1*11:01;DRB1*04:01,FALSE,,,46,0,,,NIV1+IPI3,17,19
40014,Melanoma,Anagnostou,1,18,87,1,87,1013,12,3,0.166666667,3,278,239,16,38,58,4,Responding,0.0329,0,24.4435,0,FALSE,FALSE,FALSE,HLA-A01:01;HLA-A31:01,FALSE,HLA-B37:01;HLA-B51:01,FALSE,HLA-C04:01;HLA-C06:02,DPA1*01:03:01,TRUE,DPB1*20:01;DPB1*04:02,FALSE,DQA1*01:01:01,TRUE,DQB1*05:01,TRUE,DRB1*01:01,TRUE,,,58,0,,,NIV1+IPI3,,
40016,Melanoma,Anagnostou,11,75,390,37,332,3983,71,1,0.013333333,3,848,804,6,145,224,22,,2.1684,1,2.1684,1,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A24:02,FALSE,HLA-B18:01;HLA-B27:05,FALSE,HLA-C02:02;HLA-C05:01,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*01:01:01;DQA1*01:03:01,FALSE,DQB1*06:01;DQB1*05:01,FALSE,DRB1*01:01;DRB1*15:02,FALSE,,,66,0,,,NIV3,,
CR_PE_6161,Melanoma,Snyder,8,54,317,16,229,3187,45,8,0.148148148,1,659,544,94,127,176,15,Responding,,,31.2,1,TRUE,TRUE,FALSE,HLA-A01:81;HLA-A02:01,FALSE,HLA-B18:01;HLA-B57:01,FALSE,HLA-C06:02;HLA-C12:03,DPA1*01:03:01,TRUE,DPB1*104:01;DPB1*04:01,FALSE,DQA1*05:05:01;DQA1*02:01,FALSE,DQB1*03:01;DQB1*03:03,FALSE,DRB1*07:01;DRB1*11:01,FALSE,,,81,0,,,IPI,,
CR0095,Melanoma,Snyder,5,24,117,14,103,998,19,1,0.041666667,4,216,196,1,25,35,2,Responding,,,68.4,0,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A31:01,FALSE,HLA-B35:02;HLA-B39:06,FALSE,HLA-C04:01;HLA-C07:02,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*04:01,FALSE,DQA1*04:01:01;DQA1*03:01:01,FALSE,DQB1*03:05;DQB1*04:02,FALSE,DRB1*08:01;DRB1*04:03,FALSE,,,74,0,,,IPI,,
CR04885,Melanoma,Snyder,23,201,990,62,776,10259,170,24,0.119402985,7,1683,1381,238,286,390,48,Responding,,,25.2,0,TRUE,TRUE,FALSE,HLA-A01:22N;HLA-A32:01,FALSE,HLA-B07:02;HLA-B18:01,FALSE,HLA-C07:01;HLA-C07:02,DPA1*01:03:01;DPA1*02:02:02,FALSE,DPB1*01:01,TRUE,DQA1*02:01;DQA1*03:03:01,FALSE,DQB1*03:01;DQB1*02:02,FALSE,DRB1*04:07;DRB1*07:01,FALSE,,,49,0,,,Tremelimumab,,
CR06670,Melanoma,Snyder,4,35,211,9,124,1884,28,2,0.057142857,5,455,407,10,76,123,8,Responding,,,44.4,1,TRUE,TRUE,FALSE,HLA-A24:02;HLA-A25:01,FALSE,HLA-B18:01;HLA-B44:03,FALSE,HLA-C12:03;HLA-C16:01,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*23:01,FALSE,DQA1*02:01;DQA1*01:02:01,FALSE,DQB1*06:02;DQB1*02:02,FALSE,DRB1*15:01;DRB1*07:01,FALSE,,,79,1,,,Tremelimumab,,
CR1509,Melanoma,Snyder,8,46,229,13,173,2185,43,1,0.02173913,2,404,383,3,68,103,12,Responding,,,54,0,TRUE,TRUE,FALSE,HLA-A26:01;HLA-A33:01,FALSE,HLA-B35:01;HLA-B38:01,FALSE,HLA-C04:01;HLA-C12:03,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*01:02:01;DQA1*03:01:01,FALSE,DQB1*06:09;DQB1*03:02,FALSE,DRB1*04:02;DRB1*13:02,FALSE,,,54,2,,,IPI,,
CR22640,Melanoma,Snyder,9,43,167,35,253,2040,,43,,,282,,,40,53,9,Responding,,,51.6,0,TRUE,FALSE,FALSE,HLA-A02:01;HLA-A03:01,FALSE,HLA-B41:01;HLA-B50:07,FALSE,HLA-C06:02;HLA-C17:01,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*13:01;DPB1*02:01,FALSE,DQA1*02:01;DQA1*05:01:01,FALSE,DQB1*02:02,TRUE,DRB1*07:01;DRB1*03:01,FALSE,,,71,0,,,IPI,,
CR3665,Melanoma,Snyder,3,17,55,7,78,664,17,0,0,0,120,109,5,19,30,4,Responding,,,32.4,0,TRUE,TRUE,FALSE,HLA-A02:05;HLA-A68:01,FALSE,HLA-B14:02;HLA-B18:01,FALSE,HLA-C07:01;HLA-C08:02,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*10:01;DPB1*04:01,FALSE,DQA1*01:03:01;DQA1*01:04:01,FALSE,DQB1*06:03;DQB1*05:03,FALSE,DRB1*14:54;DRB1*13:01,FALSE,,,70,0,,,IPI,,
CR4880,Melanoma,Snyder,4,49,247,12,153,2519,,49,,,412,,,51,73,12,Responding,,,64.8,0,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A02:01,FALSE,HLA-B08:01;HLA-B40:01,FALSE,HLA-C03:04;HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*05:01:01;DQA1*03:03:01,FALSE,DQB1*03:01;DQB1*02:01,FALSE,DRB1*04:01;DRB1*03:01,FALSE,,,63,0,,,IPI,,
CR6126,Melanoma,Snyder,4,39,185,20,154,1647,38,1,0.025641026,0,453,418,27,84,107,13,Responding,,,22.8,0,TRUE,TRUE,FALSE,HLA-A03:01;HLA-A32:01,FALSE,HLA-B44:02;HLA-B51:01,FALSE,HLA-C05:01;HLA-C15:02,DPA1*01:03:01,TRUE,DPB1*19:01;DPB1*04:01,FALSE,DQA1*05:05:01;DQA1*01:03:01,FALSE,DQB1*03:01;DQB1*06:03,FALSE,DRB1*11:01;DRB1*13:01,FALSE,,,66,2,,,IPI,,
CR9306,Melanoma,Snyder,14,114,557,32,518,6047,106,2,0.01754386,6,1233,1132,58,138,185,25,Responding,,,63.6,0,TRUE,TRUE,TRUE,HLA-A24:02,FALSE,HLA-B35:02;HLA-B44:02,FALSE,HLA-C04:01;HLA-C16:04,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*05:05:01;DQA1*01:05,FALSE,DQB1*03:01;DQB1*05:01,FALSE,DRB1*11:04;DRB1*10:01,FALSE,,,65,2,,,IPI,,
CR9699,Melanoma,Snyder,13,95,509,30,449,5387,89,5,0.052631579,1,1131,1055,39,182,313,35,Responding,,,52.8,0,TRUE,TRUE,FALSE,HLA-A23:01;HLA-A26:01,FALSE,HLA-B27:05;HLA-B44:03,FALSE,HLA-C01:02;HLA-C04:01,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:02,FALSE,DQA1*01:01:01;DQA1*02:01,FALSE,DQB1*02:02;DQB1*05:01,FALSE,DRB1*01:01;DRB1*07:01,FALSE,,,70,1,,,IPI + Chemo,,
CRNR0244,Melanoma,Snyder,7,48,243,19,216,2529,45,2,0.041666667,1,416,382,20,70,93,14,Non-Responding,,,25.2,0,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A03:26,FALSE,HLA-B07:02;HLA-B44:02,FALSE,HLA-C05:01;HLA-C07:02,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*01:01,FALSE,DQA1*05:05:01;DQA1*03:01:01,FALSE,DQB1*03:01;DQB1*03:02,FALSE,DRB1*11:04;DRB1*04:01,FALSE,,,49,0,,,IPI,,
CRNR2472,Melanoma,Snyder,5,42,212,7,117,1726,35,7,0.166666667,0,466,395,55,101,166,17,Non-Responding,,,20.4,0,TRUE,TRUE,FALSE,HLA-A30:02;HLA-A32:01,FALSE,HLA-B15:01;HLA-B18:01,FALSE,HLA-C03:04;HLA-C05:01,DPA1*01:03:01,TRUE,DPB1*10:01;DPB1*104:01,FALSE,DQA1*05:01:01;DQA1*01:04:01,FALSE,DQB1*05:03;DQB1*02:01,FALSE,DRB1*14:54;DRB1*03:01,FALSE,,,71,2,,,IPI,,
CRNR4941,Melanoma,Snyder,0,0,1,0,0,7,,0,,,1,,,0,0,,Non-Responding,,,86.4,0,TRUE,TRUE,FALSE,HLA-A01:22N;HLA-A68:02,FALSE,HLA-B18:01;HLA-B48:01,FALSE,HLA-C05:01;HLA-C08:03,DPA1*01:03:01,TRUE,DPB1*02:02;DPB1*02:01,FALSE,DQA1*05:01:01;DQA1*03:01:01,FALSE,DQB1*03:04;DQB1*02:01,FALSE,DRB1*04:03;DRB1*03:01,FALSE,,,40,0,,,IPI,,
CRNR7623,Melanoma,Snyder,0,8,73,0,39,533,8,0,0,0,178,175,0,27,41,0,Non-Responding,,,48,0,FALSE,TRUE,FALSE,HLA-A02:01;HLA-A69:01,FALSE,HLA-B35:01;HLA-B51:01,FALSE,HLA-C04:01;HLA-C06:02,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*02:01,TRUE,DQB1*03:03;DQB1*02:02,FALSE,DRB1*07:01,TRUE,,,62,0,,,IPI,,
LSD0167,Melanoma,Snyder,0,32,142,0,88,1507,30,1,0.03125,1,292,269,16,48,71,9,Responding,,,32.4,0,TRUE,TRUE,FALSE,HLA-A01:22N;HLA-A03:01,FALSE,HLA-B07:02;HLA-B08:01,FALSE,HLA-C07:01;HLA-C07:02,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*04:01,FALSE,DQA1*01:02:01;DQA1*05:01:01,FALSE,DQB1*06:02;DQB1*02:01,FALSE,DRB1*15:01;DRB1*03:01,FALSE,,,33,2,,,IPI,,
LSD0346,Melanoma,Snyder,5,25,164,19,101,1406,20,3,0.12,2,502,424,44,65,86,5,Responding,,,34.8,1,FALSE,FALSE,FALSE,HLA-A02:01;HLA-A03:01,FALSE,HLA-B07:02;HLA-B14:02,FALSE,HLA-C07:02;HLA-C08:02,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*01:02:01,TRUE,DQB1*06:02,TRUE,DRB1*15:01,TRUE,,,43,0,,,IPI,,
LSD1494,Melanoma,Snyder,12,95,407,23,411,4648,86,0,0,9,791,715,0,157,279,37,Responding,,,24,0,TRUE,FALSE,FALSE,HLA-A01:01;HLA-A29:02,FALSE,HLA-B08:01;HLA-B44:03,FALSE,HLA-C07:01;HLA-C16:01,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*10:01;DPB1*04:02,FALSE,DQA1*02:01;DQA1*05:01:01,FALSE,DQB1*02:01,TRUE,DRB1*07:01;DRB1*03:01,FALSE,,,70,0,,,IPI,,
LSD2056,Melanoma,Snyder,1,8,42,3,46,510,8,0,0,0,121,106,0,21,31,4,Responding,,,46.8,0,FALSE,TRUE,FALSE,HLA-A03:01;HLA-A24:02,FALSE,HLA-B27:05;HLA-B39:06,FALSE,HLA-C04:01;HLA-C07:02,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*01:01:01,TRUE,DQB1*03:01;DQB1*05:01,FALSE,DRB1*01:01;DRB1*04:01,FALSE,,,39,1,,,IPI,,
LSD2057,Melanoma,Snyder,1,13,49,2,36,486,13,0,0,0,134,118,10,20,35,4,Responding,,,39.6,0,TRUE,TRUE,FALSE,HLA-A11:01;HLA-A24:02,FALSE,HLA-B35:01;HLA-B51:01,FALSE,HLA-C01:02;HLA-C04:01,DPA1*01:03:01,TRUE,DPB1*02:02;DPB1*04:01,FALSE,DQA1*01:02:01;DQA1*01:04:01,FALSE,DQB1*06:02;DQB1*05:03,FALSE,DRB1*15:01;DRB1*14:54,FALSE,,,36,0,,,IPI,,
LSD3484,Melanoma,Snyder,3,41,203,10,184,2220,40,0,0,1,438,392,27,84,161,19,Responding,,,34.8,0,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A11:01,FALSE,HLA-B35:01;HLA-B44:02,FALSE,HLA-C04:01;HLA-C05:01,DPA1*01:03:01,TRUE,DPB1*02:02;DPB1*04:01,FALSE,DQA1*01:01:01;DQA1*05:01:01,FALSE,DQB1*05:01;DQB1*02:01,FALSE,DRB1*01:03;DRB1*03:01,FALSE,,,74,2,,,IPI,,
LSD4691,Melanoma,Snyder,0,0,2,0,0,7,,0,,,4,,,0,0,,Responding,,,87.6,0,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A24:02,FALSE,HLA-B35:08;HLA-B44:02,FALSE,HLA-C04:01;HLA-C05:01,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*04:01,FALSE,DQA1*01:05;DQA1*01:03:01,FALSE,DQB1*06:03;DQB1*05:01,FALSE,DRB1*10:01;DRB1*13:01,FALSE,,,62,0,,,IPI,,
LSD4744,Melanoma,Snyder,14,92,471,29,317,4580,89,1,0.010869565,2,925,883,19,144,206,24,Responding,,,25.2,0,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A24:02,FALSE,HLA-B07:02;HLA-B39:01,FALSE,HLA-C07:172;HLA-C12:03,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*04:01,FALSE,DQA1*02:01;DQA1*01:02:01,FALSE,DQB1*06:02;DQB1*02:02,FALSE,DRB1*15:01;DRB1*07:01,FALSE,,,52,1,,,IPI,,
LSD6336,Melanoma,Snyder,3,30,145,6,118,1642,28,1,0.033333333,1,283,267,10,45,82,7,Responding,,,82.8,0,TRUE,TRUE,FALSE,HLA-A30:01;HLA-A33:01,FALSE,HLA-B13:02;HLA-B14:02,FALSE,HLA-C06:02;HLA-C08:02,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*17:01;DPB1*104:01,FALSE,DQA1*05:05:01;DQA1*02:01,FALSE,DQB1*03:01;DQB1*02:02,FALSE,DRB1*11:04;DRB1*07:01,FALSE,,,53,0,,,IPI,,
LSD6819,Melanoma,Snyder,1,18,81,2,74,703,12,5,0.277777778,1,180,146,27,31,47,10,Responding,,,40.8,0,TRUE,FALSE,FALSE,HLA-A01:22N;HLA-A29:02,FALSE,HLA-B08:01;HLA-B44:03,FALSE,HLA-C07:01;HLA-C16:01,DPA1*01:03:01,TRUE,DPB1*11:01;DPB1*04:01,FALSE,DQA1*02:01;DQA1*05:01:01,FALSE,DQB1*02:02,TRUE,DRB1*03:01,TRUE,,,55,0,,,IPI,,
LSDNR_PE_9298,Melanoma,Snyder,3,95,503,7,346,4955,84,1,0.010526316,10,936,859,10,152,217,32,Non-Responding,,,50.4,0,TRUE,TRUE,FALSE,HLA-A01:22N;HLA-A32:01,FALSE,HLA-B44:27;HLA-B45:01,FALSE,HLA-C05:01;HLA-C06:02,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*02:01;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*02:02,FALSE,DRB1*07:01;DRB1*04:03,FALSE,,,82,0,,,IPI,,
LSDNR1120,Melanoma,Snyder,2,25,152,2,89,1460,22,2,0.08,1,368,329,16,49,76,10,Non-Responding,,,55.2,0,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A03:01,TRUE,HLA-B08:01,FALSE,HLA-C07:01;HLA-C07:02,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*04:02,FALSE,DQA1*01:01:01;DQA1*02:01,FALSE,DQB1*03:03;DQB1*05:01,FALSE,DRB1*01:01;DRB1*07:01,FALSE,,,68,1,,,IPI,,
LSDNR1650,Melanoma,Snyder,1,4,10,1,7,79,1,3,0.75,0,19,14,4,2,2,2,Non-Responding,,,32.4,1,TRUE,TRUE,FALSE,HLA-A03:01;HLA-A32:01,FALSE,HLA-B35:01;HLA-B41:01,FALSE,HLA-C04:01;HLA-C17:01,DPA1*01:03:01,TRUE,DPB1*10:01;DPB1*104:01,FALSE,DQA1*05:05:01;DQA1*05:01:01,FALSE,DQB1*03:01;DQB1*02:01,FALSE,DRB1*11:01;DRB1*03:01,FALSE,,,71,0,,,IPI,,
LSDNR3086,Melanoma,Snyder,0,3,20,0,13,153,2,1,0.333333333,0,43,37,4,1,1,0,Non-Responding,,,31.2,1,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A30:01,FALSE,HLA-B13:02;HLA-B40:01,FALSE,HLA-C03:04;HLA-C06:02,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*02:01,FALSE,DQA1*02:01;DQA1*01:02:01,FALSE,DQB1*02:02;DQB1*06:04,FALSE,DRB1*07:01;DRB1*13:02,FALSE,,,43,1,,,IPI,,
NR_PE_6721,Melanoma,Snyder,3,13,43,29,126,709,,13,,,90,,,15,20,5,Non-Responding,,,9.6,1,TRUE,TRUE,FALSE,HLA-A03:01;HLA-A11:77,FALSE,HLA-B51:01;HLA-B55:01,FALSE,HLA-C01:02;HLA-C03:03,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:02,FALSE,DQA1*05:05:01;DQA1*01:03:01,FALSE,DQB1*03:01;DQB1*06:03,FALSE,DRB1*11:01;DRB1*13:01,FALSE,,,64,2,,,IPI,,
NR_PE_9765,Melanoma,Snyder,1,3,26,1,8,219,3,0,0,0,58,54,3,11,16,2,Non-Responding,,,25.2,1,FALSE,TRUE,FALSE,HLA-A01:01;HLA-A03:26,FALSE,HLA-B07:02;HLA-B15:17,FALSE,HLA-C07:01;HLA-C07:02,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*23:01,FALSE,DQA1*01:02:01,TRUE,DQB1*06:02;DQB1*05:01,FALSE,DRB1*15:01;DRB1*13:02,FALSE,,,38,0,,,IPI,,
NR1867,Melanoma,Snyder,0,1,13,0,1,53,,1,,,47,,,4,7,0,Non-Responding,,,18,1,TRUE,TRUE,FALSE,HLA-A66:01;HLA-A68:01,TRUE,HLA-B15:03,TRUE,HLA-C02:10,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*104:01,FALSE,DQA1*01:02:01;DQA1*01:02:02,FALSE,DQB1*06:02;DQB1*02:02,FALSE,DRB1*09:01;DRB1*11:01,FALSE,,,68,2,,,IPI,,
NR2137,Melanoma,Snyder,2,21,173,4,103,1445,20,1,0.047619048,0,529,497,14,92,125,5,Non-Responding,,,9.6,1,FALSE,TRUE,FALSE,HLA-A01:01;HLA-A02:01,FALSE,HLA-B07:02;HLA-B39:01,FALSE,HLA-C07:02;HLA-C12:03,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*01:01:01,TRUE,DQB1*03:02;DQB1*05:01,FALSE,DRB1*01:01;DRB1*04:04,FALSE,,,18,1,,,IPI,,
NR3156,Melanoma,Snyder,0,0,0,0,0,0,,0,,,0,,,0,0,,Non-Responding,,,13.2,1,TRUE,TRUE,FALSE,HLA-A32:01;HLA-A68:01,FALSE,HLA-B14:01;HLA-B44:02,FALSE,HLA-C07:04;HLA-C08:02,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*05:05:01;DQA1*02:01,FALSE,DQB1*03:01;DQB1*02:02,FALSE,DRB1*07:01;DRB1*11:01,FALSE,,,68,0,,,IPI,,
NR3549,Melanoma,Snyder,4,47,174,4,173,2097,46,0,0,1,352,334,0,35,44,5,Non-Responding,,,6,1,TRUE,TRUE,FALSE,HLA-A03:01;HLA-A11:01,TRUE,HLA-B07:02,TRUE,HLA-C07:02,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*11:01;DPB1*04:01,FALSE,DQA1*02:01;DQA1*01:02:01,FALSE,DQB1*06:02;DQB1*02:02,FALSE,DRB1*15:01;DRB1*07:01,FALSE,,,50,1,,,IPI,,
NR4018,Melanoma,Snyder,1,13,52,3,43,573,11,2,0.153846154,0,120,110,8,17,27,3,Non-Responding,,,3.6,1,TRUE,TRUE,FALSE,HLA-A01:22N;HLA-A25:01,FALSE,HLA-B18:01;HLA-B35:01,FALSE,HLA-C04:01;HLA-C12:03,DPA1*01:03:01,TRUE,DPB1*23:01;DPB1*04:02,FALSE,DQA1*01:01:01;DQA1*01:02:01,FALSE,DQB1*06:02;DQB1*05:01,FALSE,DRB1*15:01;DRB1*01:01,FALSE,,,55,0,,,IPI,,
NR4045,Melanoma,Snyder,3,23,118,5,125,1192,22,1,0.043478261,0,367,322,32,65,104,9,Non-Responding,,,20.4,1,FALSE,FALSE,FALSE,HLA-A01:22N;HLA-A25:01,FALSE,HLA-B07:02;HLA-B18:01,FALSE,HLA-C07:02;HLA-C12:03,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:02,FALSE,DQA1*01:02:01,TRUE,DQB1*06:02,TRUE,DRB1*15:01,TRUE,,,42,0,,,IPI,,
NR4083,Melanoma,Snyder,2,31,109,5,130,1300,30,0,0,1,247,235,1,50,67,13,Non-Responding,,,2.4,1,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A31:01,FALSE,HLA-B27:05;HLA-B37:01,FALSE,HLA-C02:02;HLA-C06:02,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*02:01,FALSE,DQA1*01:05;DQA1*03:03:01,FALSE,DQB1*03:02;DQB1*05:01,FALSE,DRB1*10:01;DRB1*04:01,FALSE,,,54,2,,,IPI,,
NR4631,Melanoma,Snyder,9,90,459,14,359,5233,85,5,0.055555556,0,988,901,65,158,249,26,Non-Responding,,,6,1,TRUE,TRUE,FALSE,HLA-A01:22N;HLA-A03:01,FALSE,HLA-B08:79;HLA-B42:01,FALSE,HLA-C07:01;HLA-C07:02,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*13:01;DPB1*04:01,FALSE,DQA1*01:02:01;DQA1*01:04:01,FALSE,DQB1*06:02;DQB1*05:03,FALSE,DRB1*15:01;DRB1*14:54,FALSE,,,59,0,,,IPI,,
NR4810,Melanoma,Snyder,7,31,158,16,134,1584,29,1,0.032258065,1,303,277,14,63,101,12,Non-Responding,,,4.8,1,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A33:01,FALSE,HLA-B14:02;HLA-B15:01,FALSE,HLA-C02:02;HLA-C08:02,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*04:01;DPB1*01:01,FALSE,DQA1*05:05:01;DQA1*01:01:02,FALSE,DQB1*03:01;DQB1*05:01,FALSE,DRB1*01:02;DRB1*13:03,FALSE,,,48,2,,,IPI,,
NR4949,Melanoma,Snyder,2,27,191,2,96,1898,23,1,0.037037037,3,487,429,16,90,113,13,Non-Responding,,,8.4,1,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A03:01,FALSE,HLA-B27:05;HLA-B44:02,FALSE,HLA-C01:02;HLA-C05:01,DPA1*01:03:01,TRUE,DPB1*19:01;DPB1*04:02,FALSE,DQA1*01:01:01;DQA1*03:03:01,FALSE,DQB1*03:01;DQB1*05:01,FALSE,DRB1*01:01;DRB1*04:01,FALSE,,,79,2,,,IPI,,
NR5784,Melanoma,Snyder,0,0,1,0,0,13,,0,,,4,,,0,0,,Non-Responding,,,6,1,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A24:03,FALSE,HLA-B07:02;HLA-B51:07,FALSE,HLA-C07:02;HLA-C14:02,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*05:05:01;DQA1*01:04:01,FALSE,DQB1*03:01;DQB1*05:03,FALSE,DRB1*11:01;DRB1*14:54,FALSE,,,58,2,,,IPI,,
NR6689,Melanoma,Snyder,0,0,0,0,0,0,,0,,,1,,,0,0,,Non-Responding,,,14.4,1,FALSE,TRUE,FALSE,HLA-A03:01;HLA-A11:77,FALSE,HLA-B08:01;HLA-B35:01,FALSE,HLA-C04:01;HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*01:02:01,TRUE,DQB1*03:01;DQB1*06:02,FALSE,DRB1*15:01;DRB1*04:01,FALSE,,,46,1,,,IPI,,
NR6842,Melanoma,Snyder,0,0,0,0,0,0,,0,,,0,,,0,0,,Non-Responding,,,9.6,1,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A24:02,FALSE,HLA-B15:01;HLA-B35:03,FALSE,HLA-C03:03;HLA-C04:01,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*04:01,FALSE,DQA1*01:02:01;DQA1*03:01:01,FALSE,DQB1*06:02;DQB1*03:02,FALSE,DRB1*15:01;DRB1*04:04,FALSE,,,64,2,,,IPI,,
NR8727,Melanoma,Snyder,0,0,0,0,0,0,,0,,,0,,,0,0,,Non-Responding,,,4.8,1,TRUE,TRUE,FALSE,HLA-A29:01;HLA-A68:02,FALSE,HLA-B14:02;HLA-B35:02,FALSE,HLA-C04:01;HLA-C08:02,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*04:02,FALSE,DQA1*05:05:01;DQA1*01:01:02,FALSE,DQB1*03:01;DQB1*05:01,FALSE,DRB1*11:04;DRB1*01:02,FALSE,,,69,2,,,IPI,,
NR8815,Melanoma,Snyder,16,178,815,41,724,8736,142,18,0.101123596,18,1433,1224,109,253,374,52,Non-Responding,,,14.4,1,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A03:01,FALSE,HLA-B27:02;HLA-B51:01,FALSE,HLA-C01:02;HLA-C02:02,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*04:01,FALSE,DQA1*04:01:01;DQA1*01:02:01,FALSE,DQB1*06:02;DQB1*04:02,FALSE,DRB1*15:01;DRB1*08:01,FALSE,,,67,0,,,IPI,,
NR9341,Melanoma,Snyder,0,0,1,0,0,15,,0,,,8,,,1,1,0,Non-Responding,,,12,1,TRUE,TRUE,TRUE,HLA-A03:01,FALSE,HLA-B07:02;HLA-B14:02,FALSE,HLA-C07:02;HLA-C08:02,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:02,FALSE,DQA1*02:01;DQA1*01:02:01,FALSE,DQB1*06:02;DQB1*02:02,FALSE,DRB1*15:01;DRB1*07:01,FALSE,,,77,1,,,IPI,,
NR9445,Melanoma,Snyder,3,19,97,7,81,1050,16,2,0.105263158,1,222,197,19,46,63,2,Non-Responding,,,2.4,1,TRUE,TRUE,FALSE,HLA-A01:22N;HLA-A02:01,FALSE,HLA-B27:05;HLA-B57:01,FALSE,HLA-C01:02;HLA-C06:02,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:02,FALSE,DQA1*01:01:01;DQA1*02:01,FALSE,DQB1*03:03;DQB1*05:01,FALSE,DRB1*01:01;DRB1*07:01,FALSE,,,50,1,,,IPI + Chemo,,
NR9449,Melanoma,Snyder,1,18,100,2,81,997,16,1,0.055555556,1,258,241,5,57,81,6,Non-Responding,,,7.2,1,FALSE,FALSE,FALSE,HLA-A02:01;HLA-A03:01,FALSE,HLA-B44:02;HLA-B57:01,FALSE,HLA-C05:01;HLA-C06:02,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*02:01,FALSE,DQA1*03:03:01,TRUE,DQB1*03:01,TRUE,DRB1*04:01,TRUE,,,64,0,,,IPI,,
NR9521,Melanoma,Snyder,4,36,275,11,151,2389,33,3,0.083333333,0,895,807,68,165,254,15,Non-Responding,,,32.4,1,FALSE,FALSE,FALSE,HLA-A02:01;HLA-A24:02,FALSE,HLA-B44:02;HLA-B51:01,FALSE,HLA-C01:02;HLA-C05:01,DPA1*01:03:01,TRUE,DPB1*02:01,TRUE,DQA1*05:05:01,TRUE,DQB1*03:01,TRUE,DRB1*11:01;DRB1*11:08,FALSE,,,74,0,,,IPI,,
NR9705,Melanoma,Snyder,0,2,11,0,5,103,2,0,0,0,24,21,2,1,1,1,Non-Responding,,,14.4,1,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A24:02,FALSE,HLA-B08:01;HLA-B15:01,FALSE,HLA-C03:03;HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*01:01,FALSE,DQA1*05:05:01;DQA1*05:01:01,FALSE,DQB1*03:01;DQB1*02:01,FALSE,DRB1*11:03;DRB1*03:01,FALSE,,,63,0,,,IPI,,
PR03803,Melanoma,Snyder,2,11,34,2,33,431,,11,,,63,,,6,12,1,Non-Responding,,,94.8,1,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A23:01,FALSE,HLA-B40:02;HLA-B49:01,FALSE,HLA-C02:02;HLA-C07:01,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*13:01;DPB1*04:01,FALSE,DQA1*05:05:01;DQA1*02:01,FALSE,DQB1*03:01;DQB1*03:03,FALSE,DRB1*11:04;DRB1*07:01,FALSE,,,90,0,,,Tremelimumab,,
PR12117,Melanoma,Snyder,12,128,614,36,524,7039,114,9,0.0703125,5,955,860,62,144,224,46,Responding,,,19.2,1,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A03:01,FALSE,HLA-B35:01;HLA-B40:01,FALSE,HLA-C03:04;HLA-C04:01,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*02:01,FALSE,DQA1*05:01:01;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*02:01,FALSE,DRB1*04:01;DRB1*03:01,FALSE,,,66,0,,,Tremelimumab,,
PR4035,Melanoma,Snyder,6,35,170,21,166,1827,31,2,0.057142857,2,430,410,12,65,91,10,Responding,,,50.4,0,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A02:01,TRUE,HLA-B39:01,FALSE,HLA-C06:02;HLA-C12:03,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*05:05:01;DQA1*01:02:01,FALSE,DQB1*03:01;DQB1*06:02,FALSE,DRB1*15:01;DRB1*11:04,FALSE,,,78,2,,,IPI,,
PR4046,Melanoma,Snyder,2,8,48,8,42,495,7,1,0.125,0,98,88,8,14,24,2,Responding,,,25.2,0,TRUE,TRUE,FALSE,HLA-A01:22N;HLA-A02:01,FALSE,HLA-B15:01;HLA-B49:01,FALSE,HLA-C03:03;HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*04:02,FALSE,DQA1*01:01:02;DQA1*01:03:01,FALSE,DQB1*06:03;DQB1*05:01,FALSE,DRB1*01:02;DRB1*13:01,FALSE,,,44,0,,,IPI,,
PR4077,Melanoma,Snyder,14,176,891,29,600,8836,161,8,0.045454545,7,1431,1350,37,219,322,52,Responding,,,73.2,0,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A01:22N,FALSE,HLA-B08:01;HLA-B57:01,FALSE,HLA-C06:02;HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*01:01,FALSE,DQA1*05:05:01;DQA1*05:01:01,FALSE,DQB1*03:01;DQB1*02:01,FALSE,DRB1*11:01;DRB1*03:01,FALSE,,,75,0,,,IPI,,
PR4091,Melanoma,Snyder,0,27,124,0,101,1537,26,1,0.037037037,0,230,199,17,40,55,10,Responding,,,72,0,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A02:01,FALSE,HLA-B37:01;HLA-B44:02,FALSE,HLA-C05:01;HLA-C06:02,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*01:01,FALSE,DQA1*01:01:01;DQA1*01:03:01,FALSE,DQB1*06:03;DQB1*05:01,FALSE,DRB1*10:01;DRB1*13:01,FALSE,,,65,0,,,IPI,,
PR4092,Melanoma,Snyder,14,138,783,37,535,7661,66,63,0.456521739,9,1889,944,865,263,441,45,Responding,,,73.2,0,TRUE,TRUE,FALSE,HLA-A24:02;HLA-A26:01,FALSE,HLA-B38:01;HLA-B49:01,FALSE,HLA-C07:01;HLA-C12:03,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*04:01,TRUE,DQA1*05:05:01;DQA1*01:03:01,FALSE,DQB1*03:01;DQB1*06:03,FALSE,DRB1*11:04;DRB1*13:01,FALSE,,,57,2,,,IPI,,
SSD2051,Melanoma,Snyder,1,3,11,1,11,128,3,0,0,0,33,28,5,5,6,0,Non-Responding,,,9.6,1,TRUE,TRUE,FALSE,HLA-A23:01;HLA-A36:01,TRUE,HLA-B53:01,TRUE,HLA-C04:01,DPA1*02:01:01,TRUE,DPB1*131:01;DPB1*11:01,FALSE,DQA1*05:05:01;DQA1*01:02:01,FALSE,DQB1*03:01;DQB1*06:02,FALSE,DRB1*11:01;DRB1*12:01,FALSE,,,61,2,,,IPI + Chemo,,
SSD5038,Melanoma,Snyder,1,21,104,3,76,1120,20,0,0,1,241,225,0,41,60,11,Non-Responding,,,14.4,1,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A33:01,FALSE,HLA-B14:02;HLA-B38:02,FALSE,HLA-C08:02;HLA-C12:03,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*04:02,FALSE,DQA1*05:05:01;DQA1*01:01:02,FALSE,DQB1*03:01;DQB1*05:01,FALSE,DRB1*01:02;DRB1*11:01,FALSE,,,55,2,,,IPI,,
SSD5118,Melanoma,Snyder,0,4,27,0,13,287,4,0,0,0,50,50,0,4,4,0,Non-Responding,,,32.4,1,TRUE,TRUE,TRUE,HLA-A01:01,TRUE,HLA-B07:02,TRUE,HLA-C07:02,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*05:05:01;DQA1*01:02:01,FALSE,DQB1*03:01;DQB1*06:02,FALSE,DRB1*15:01;DRB1*11:04,FALSE,,,55,2,,,IPI,,
SSD5934,Melanoma,Snyder,1,10,49,1,36,482,10,0,0,0,133,127,4,6,8,1,Non-Responding,,,19.2,1,FALSE,FALSE,TRUE,HLA-A24:02,TRUE,HLA-B35:02,TRUE,HLA-C04:01,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*05:05:01,TRUE,DQB1*03:01,TRUE,DRB1*11:04,TRUE,,,52,0,,,IPI,,
SSD6494,Melanoma,Snyder,6,43,217,15,198,2334,32,2,0.046511628,9,510,420,12,75,107,10,Non-Responding,,,8.4,1,TRUE,TRUE,FALSE,HLA-A24:02;HLA-A68:02,FALSE,HLA-B14:02;HLA-B35:01,FALSE,HLA-C04:01;HLA-C08:02,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*01:01:01;DQA1*05:05:01,FALSE,DQB1*03:01;DQB1*05:01,FALSE,DRB1*01:03;DRB1*13:03,FALSE,,,63,2,,,IPI,,
SSD7357,Melanoma,Snyder,11,132,649,25,447,6633,129,1,0.007575758,2,1044,1005,7,183,257,47,Non-Responding,,,24,1,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A24:02,FALSE,HLA-B18:01;HLA-B55:01,FALSE,HLA-C03:03;HLA-C12:03,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*01:01,FALSE,DQA1*05:05:01;DQA1*05:01:01,FALSE,DQB1*03:01;DQB1*02:01,FALSE,DRB1*12:01;DRB1*03:01,FALSE,,,50,0,,,IPI,,
CGLU111,NSCLC,Anagnostou,0,7,53,0,15,424,6,1,0.142857143,0,160,157,3,16,27,2,Responding,39.64285714,0,39.64285714,0,TRUE,TRUE,FALSE,HLA-A02:02;HLA-A02:01,FALSE,HLA-B07:02;HLA-B42:01,FALSE,HLA-C07:02;HLA-C17:01,DPA1*02:02:02,TRUE,DPB1*01:01,TRUE,DQA1*01:02:01;DQA1*01:02:02,FALSE,DQB1*06:02;DQB1*05:02,FALSE,DRB1*15:03;DRB1*16:02,FALSE,2,60,70.51506849,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU113,NSCLC,Anagnostou,1,16,114,2,43,897,14,2,0.125,0,382,355,25,54,74,4,Non-Responding,1.321428571,1,2.178571429,1,TRUE,TRUE,TRUE,HLA-A02:01,FALSE,HLA-B07:02;HLA-B57:01,FALSE,HLA-C06:02;HLA-C07:02,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*05:05:01;DQA1*02:01,FALSE,DQB1*03:01;DQB1*03:03,FALSE,DRB1*07:01;DRB1*13:03,FALSE,,NE,63.32876712,0,2,Current Smoker,Anti-PD1 (nivolumab),,
CGLU115,NSCLC,Anagnostou,5,15,77,17,116,644,11,4,0.266666667,0,229,198,31,29,42,7,Non-Responding,2.392857143,1,3.321428571,0,TRUE,TRUE,TRUE,HLA-A02:01,FALSE,HLA-B78:01;HLA-B08:01,FALSE,HLA-C16:01;HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*01:02:01;DQA1*05:01:01,FALSE,DQB1*06:02;DQB1*02:01,FALSE,DRB1*08:06;DRB1*03:01,FALSE,,NE,63.01917808,2,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU116,NSCLC,Anagnostou,2,8,30,3,34,276,6,2,0.25,0,94,84,10,9,16,0,Responding,12.75,1,16.75,1,TRUE,TRUE,FALSE,HLA-A31:01;HLA-A01:01,FALSE,HLA-B52:01;HLA-B51:02,FALSE,HLA-C12:02;HLA-C15:02,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*04:01,FALSE,DQA1*01:03:01;DQA1*01:02:01,FALSE,DQB1*06:01;DQB1*06:04,FALSE,DRB1*15:02;DRB1*13:02,FALSE,2,70,55.83013699,0,1,Former Smoker,Dual ICB (anti-PD1+anti-CTLA4),,
CGLU117,NSCLC,Anagnostou,3,20,79,5,81,779,20,0,0,0,251,223,23,32,72,7,Responding,7.75,1,13.71428571,1,TRUE,TRUE,FALSE,HLA-A26:01;HLA-A24:02,FALSE,HLA-B35:02;HLA-B08:01,FALSE,HLA-C04:01;HLA-C07:02,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*05:05:01;DQA1*05:01:01,FALSE,DQB1*03:01;DQB1*02:01,FALSE,DRB1*11:04;DRB1*03:01,FALSE,1,5,56.10958904,0,2,Current Smoker,Anti-PD1 (nivolumab),,
CGLU120,NSCLC,Anagnostou,0,0,14,0,0,56,0,0,,0,40,40,0,2,2,0,Non-Responding,5.5,1,17.21428571,1,TRUE,TRUE,FALSE,HLA-A29:02;HLA-A30:01,FALSE,HLA-B15:03;HLA-B42:01,FALSE,HLA-C17:01;HLA-C02:10,DPA1*01:03:01,TRUE,DPB1*131:01;DPB1*18:01,FALSE,DQA1*05:05:01;DQA1*04:01:01,FALSE,DQB1*03:01;DQB1*04:02,FALSE,DRB1*08:04,TRUE,0,0,57.82191781,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU121,NSCLC,Anagnostou,0,2,19,0,3,103,2,0,0,0,57,50,7,3,4,0,Non-Responding,1.107142857,1,8.928571429,1,TRUE,TRUE,TRUE,HLA-A03:01,FALSE,HLA-B27:05;HLA-B07:02,FALSE,HLA-C07:02;HLA-C02:02,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*03:01;DPB1*11:01,FALSE,DQA1*01:02:01;DQA1*03:03:01,FALSE,DQB1*06:02;DQB1*03:02,FALSE,DRB1*15:01;DRB1*04:01,FALSE,1,5,47.12328767,2,0,Never Smoker,Anti-PD1 (nivolumab),,
CGLU124,NSCLC,Anagnostou,0,3,11,0,10,105,3,0,0,0,33,29,2,5,6,2,Non-Responding,1.571428571,1,5.857142857,1,FALSE,TRUE,FALSE,HLA-A24:02;HLA-A02:01,FALSE,HLA-B40:02;HLA-B41:01,FALSE,HLA-C17:01;HLA-C02:02,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*02:01,FALSE,DQA1*01:02:01,TRUE,DQB1*06:09;DQB1*06:04,FALSE,DRB1*13:02,TRUE,0,0,49.95342466,0,0,Never Smoker,Anti-PD1 (nivolumab),,
CGLU125,NSCLC,Anagnostou,1,15,129,6,63,966,,15,,,385,,,53,83,6,Responding,23.32142857,1,51.14285714,0,TRUE,TRUE,FALSE,HLA-A24:02;HLA-A25:01,FALSE,HLA-B58:01;HLA-B57:01,FALSE,HLA-C06:02;HLA-C07:01,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*17:01;DPB1*04:01,FALSE,DQA1*05:05:01;DQA1*02:01,FALSE,DQB1*03:01;DQB1*03:03,FALSE,DRB1*07:01;DRB1*13:03,FALSE,1,10,75.78630137,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU126,NSCLC,Anagnostou,0,1,4,0,1,38,1,0,0,0,12,8,4,0,0,0,Non-Responding,5.178571429,1,15.32142857,1,TRUE,TRUE,FALSE,HLA-A29:02;HLA-A30:01,FALSE,HLA-B13:02;HLA-B44:03,FALSE,HLA-C06:02;HLA-C16:01,DPA1*01:03:01;DPA1*02:02:02,FALSE,DPB1*03:01;DPB1*01:01,FALSE,DQA1*05:05:01;DQA1*02:01,FALSE,DQB1*03:01;DQB1*02:02,FALSE,DRB1*07:01;DRB1*11:01,FALSE,0,0,72.62739726,0,0,Never Smoker,Anti-PD1 (nivolumab),,
CGLU127,NSCLC,Anagnostou,1,16,97,2,48,964,15,1,0.0625,0,291,271,18,31,45,4,Responding,9.892857143,1,25.39285714,1,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A30:01,FALSE,HLA-B39:01;HLA-B42:01,FALSE,HLA-C07:02;HLA-C17:01,DPA1*01:03:01,TRUE,DPB1*04:02;DPB1*01:01,FALSE,DQA1*04:01:01;DQA1*05:01:01,FALSE,DQB1*04:02;DQB1*02:01,FALSE,DRB1*08:11;DRB1*03:01,FALSE,1,10,58.8,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU128,NSCLC,Anagnostou,0,1,9,0,8,73,1,0,0,0,26,25,1,6,9,1,Non-Responding,4.678571429,1,37.82142857,1,TRUE,TRUE,FALSE,HLA-A24:02;HLA-A03:01,FALSE,HLA-B55:01;HLA-B44:02,FALSE,HLA-C03:03;HLA-C05:01,DPA1*01:03:01;DPA1*02:02:02,FALSE,DPB1*02:01;DPB1*05:01,FALSE,DQA1*01:01:02;DQA1*01:02:01,FALSE,DQB1*06:02;DQB1*05:01,FALSE,DRB1*15:01;DRB1*01:02,FALSE,2,70,64.51780822,0,0,Never Smoker,Anti-PD1 (nivolumab),,
CGLU129,NSCLC,Anagnostou,1,9,38,1,26,330,8,1,0.111111111,0,113,105,8,16,27,1,Non-Responding,1.607142857,1,15.89285714,1,TRUE,TRUE,FALSE,HLA-A03:01;HLA-A02:01,FALSE,HLA-B08:01;HLA-B44:03,FALSE,HLA-C16:01;HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*04:01,FALSE,DQA1*02:01;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*02:02,FALSE,DRB1*07:01;DRB1*04:04,FALSE,2,80,61.80547945,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU130,NSCLC,Anagnostou,1,6,34,3,31,328,5,1,0.166666667,0,183,160,20,23,43,1,Non-Responding,3.5,1,5.285714286,0,TRUE,TRUE,FALSE,HLA-A23:01;HLA-A02:01,FALSE,HLA-B49:01;HLA-B44:02,FALSE,HLA-C07:04;HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*03:01,TRUE,DQA1*05:05:01;DQA1*01:02:02,FALSE,DQB1*03:01;DQB1*05:02,FALSE,DRB1*16:01;DRB1*11:01,FALSE,1,20,73.57808219,2,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU131,NSCLC,Anagnostou,2,6,29,3,35,283,,6,,,83,,,15,16,0,Responding,6.75,1,13.21428571,1,TRUE,TRUE,FALSE,HLA-A25:01;HLA-A26:14,FALSE,HLA-B18:01;HLA-B38:01,TRUE,HLA-C12:03,DPA1*01:03:01,TRUE,DPB1*19:01;DPB1*04:01,FALSE,DQA1*01:03:01;DQA1*03:01:01,FALSE,DQB1*06:03;DQB1*03:02,FALSE,DRB1*04:02;DRB1*13:01,FALSE,1,20,57.09863014,2,0,Never Smoker,Anti-PD1 (nivolumab),,
CGLU132,NSCLC,Anagnostou,0,0,5,0,0,36,0,0,,0,13,13,0,2,4,0,Non-Responding,1.892857143,1,6.178571429,1,TRUE,TRUE,FALSE,HLA-A68:02;HLA-A23:01,FALSE,HLA-B07:02;HLA-B42:01,FALSE,HLA-C07:02;HLA-C17:01,DPA1*02:01:01;DPA1*02:02:02,FALSE,DPB1*17:01;DPB1*01:01,FALSE,DQA1*04:01:01;DQA1*03:03:01,FALSE,DQB1*02:02;DQB1*04:02,FALSE,DRB1*09:01;DRB1*03:02,FALSE,,NE,63.00547945,0,0,Never Smoker,Anti-PD1 (nivolumab),,
CGLU133,NSCLC,Anagnostou,1,13,93,4,50,791,12,1,0.076923077,0,279,247,32,33,37,2,Responding,93.10714286,0,93.10714286,0,TRUE,TRUE,FALSE,HLA-A03:01;HLA-A02:01,TRUE,HLA-B07:02,TRUE,HLA-C07:02,DPA1*01:03:01,TRUE,DPB1*04:02,TRUE,DQA1*01:01:01;DQA1*01:02,FALSE,DQB1*06:04;DQB1*05:01,FALSE,DRB1*01:01;DRB1*13:02,FALSE,2,70,61.20547945,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU134,NSCLC,Anagnostou,0,1,8,0,1,50,1,0,0,0,23,20,3,2,2,0,Responding,56.5,0,56.5,0,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A02:01,FALSE,HLA-B44:02;HLA-B44:03,FALSE,HLA-C05:01;HLA-C04:01,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*02:01,FALSE,DQA1*01:01:01;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*05:01,FALSE,DRB1*01:01;DRB1*04:02,FALSE,,NE,72.22739726,2,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU135,NSCLC,Anagnostou,1,17,98,3,53,807,13,4,0.235294118,0,312,281,31,34,49,3,Responding,23.39285714,1,46.03571429,0,TRUE,TRUE,TRUE,HLA-A02:01,FALSE,HLA-B49:01;HLA-B44:02,FALSE,HLA-C05:01;HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*01:02:01;DQA1*03:03:01,FALSE,DQB1*03:01;DQB1*06:04,FALSE,DRB1*13:02;DRB1*04:08,FALSE,,NE,59.27671233,2,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU159,NSCLC,Anagnostou,0,3,12,0,9,130,3,0,0,0,57,54,3,5,6,1,Non-Responding,3.392857143,1,5.035714286,1,TRUE,TRUE,FALSE,HLA-A02:05;HLA-A01:01,FALSE,HLA-B49:01;HLA-B08:01,TRUE,HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*01:02:01;DQA1*05:01:01,FALSE,DQB1*06:02;DQB1*02:01,FALSE,DRB1*15:01;DRB1*03:01,FALSE,,NE,62.67945205,2,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU160,NSCLC,Anagnostou,0,3,18,0,16,167,3,0,0,0,49,46,3,6,7,1,Responding,13.25,0,13.25,1,TRUE,TRUE,FALSE,HLA-A03:01;HLA-A02:01,FALSE,HLA-B07:02;HLA-B15:01,FALSE,HLA-C07:02;HLA-C03:04,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*05:05:01;DQA1*02:01,FALSE,DQB1*03:01;DQB1*03:03,FALSE,DRB1*07:01;DRB1*11:03,FALSE,,NE,87.43561644,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU162,NSCLC,Anagnostou,1,8,41,3,40,326,7,1,0.125,0,149,141,7,11,17,1,Responding,7,1,7,0,TRUE,FALSE,TRUE,HLA-A01:01,FALSE,HLA-B18:01;HLA-B08:01,TRUE,HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*02:01;DQA1*05:01:01,FALSE,DQB1*02:02,TRUE,DRB1*07:01;DRB1*03:01,FALSE,,NE,78.30136986,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU163,NSCLC,Anagnostou,1,3,35,17,36,287,3,0,0,0,127,93,34,17,22,3,Non-Responding,3,1,38.60714286,0,TRUE,TRUE,FALSE,HLA-A26:01;HLA-A03:01,FALSE,HLA-B45:01;HLA-B15:01,FALSE,HLA-C03:03;HLA-C06:02,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*04:02,FALSE,DQA1*05:05:01;DQA1*02:01,FALSE,DQB1*03:01;DQB1*02:02,FALSE,DRB1*07:01;DRB1*12:01,FALSE,2,100,72.41369863,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU168,NSCLC,Anagnostou,1,22,116,1,75,1000,22,0,0,0,369,348,12,57,95,9,Responding,7.25,1,12.64285714,0,TRUE,TRUE,TRUE,HLA-A02:01,FALSE,HLA-B44:02;HLA-B44:03,FALSE,HLA-C05:01;HLA-C04:01,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*01:01,FALSE,DQA1*02:01;DQA1*01:04:01,FALSE,DQB1*05:03;DQB1*02:02,FALSE,DRB1*07:01;DRB1*14:01,FALSE,1,30,87.95616438,1,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU169,NSCLC,Anagnostou,0,4,51,0,10,366,4,0,0,0,164,164,0,18,22,2,Non-Responding,0.75,0,0.75,1,TRUE,TRUE,TRUE,HLA-A24:02,FALSE,HLA-B41:02;HLA-B39:06,FALSE,HLA-C07:02;HLA-C17:01,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*05:05:01;DQA1*04:01:01,FALSE,DQB1*03:01;DQB1*04:02,FALSE,DRB1*08:01;DRB1*13:03,FALSE,2,100,61.6630137,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU172,NSCLC,Anagnostou,2,11,67,4,34,557,11,0,0,0,207,193,14,33,58,2,Non-Responding,4.178571429,1,9,1,TRUE,TRUE,FALSE,HLA-A23:01;HLA-A66:03,FALSE,HLA-B15:03;HLA-B44:03,FALSE,HLA-C04:01;HLA-C02:10,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*18:01;DPB1*17:01,FALSE,DQA1*05:05:01;DQA1*01:05,FALSE,DQB1*03:19;DQB1*05:01,FALSE,DRB1*11:01;DRB1*12:01,FALSE,1,30,57.75890411,2,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU178,NSCLC,Anagnostou,1,3,8,1,14,85,,3,,,33,,,2,2,0,,1,0,1,0,TRUE,TRUE,FALSE,HLA-A01:03;HLA-A29:01,FALSE,HLA-B07:05;HLA-B73:01,TRUE,HLA-C15:05,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*04:01,FALSE,DQA1*01:05;DQA1*01:02:02,FALSE,DQB1*05:02;DQB1*05:01,FALSE,DRB1*15:01;DRB1*10:01,FALSE,0,0,67.64109589,0,0,Never Smoker,Anti-PD1 (nivolumab),,
CGLU180,NSCLC,Anagnostou,0,0,11,0,0,51,,0,,,22,,,5,8,0,Responding,10.92857143,0,10.92857143,0,TRUE,TRUE,FALSE,HLA-A33:01;HLA-A01:01,FALSE,HLA-B52:01;HLA-B14:02,FALSE,HLA-C12:02;HLA-C08:02,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*02:01;DPB1*17:01,FALSE,DQA1*01:03:01;DQA1*05:01:01,FALSE,DQB1*06:01;DQB1*02:01,FALSE,DRB1*15:02;DRB1*03:01,FALSE,1,1,76.07945205,2,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU181,NSCLC,Anagnostou,0,9,70,0,28,485,8,1,0.111111111,0,249,234,14,31,47,1,Responding,7.428571429,1,15.64285714,0,TRUE,TRUE,FALSE,HLA-A23:01;HLA-A30:01,FALSE,HLA-B07:02;HLA-B42:01,FALSE,HLA-C07:02;HLA-C17:01,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*02:01,FALSE,DQA1*04:01:01;DQA1*03:03:01,FALSE,DQB1*03:19;DQB1*02:02,FALSE,DRB1*09:01;DRB1*08:04,FALSE,0,0,55.49589041,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU185,NSCLC,Anagnostou,0,7,92,0,11,686,5,2,0.285714286,0,270,215,55,35,46,3,Responding,11.82142857,1,37.60714286,0,TRUE,TRUE,FALSE,HLA-A66:03;HLA-A02:01,FALSE,HLA-B44:03;HLA-B15:01,FALSE,HLA-C04:01;HLA-C01:02,DPA1*02:01:01;DPA1*02:02:02,FALSE,DPB1*13:01;DPB1*01:01,FALSE,DQA1*01:01:02;DQA1*02:01,FALSE,DQB1*03:03;DQB1*05:01,FALSE,DRB1*01:02;DRB1*07:01,FALSE,0,0,55.82191781,1,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU187,NSCLC,Anagnostou,1,7,59,2,29,456,7,0,0,0,217,179,38,27,38,2,Non-Responding,1.535714286,1,2.214285714,1,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A30:01,FALSE,HLA-B57:01;HLA-B13:02,TRUE,HLA-C06:02,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*13:01;DPB1*02:01,FALSE,DQA1*02:01;DQA1*01:04:01,FALSE,DQB1*03:03;DQB1*05:03,FALSE,DRB1*07:01;DRB1*14:54,FALSE,0,0,58.59178082,1,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU189,NSCLC,Anagnostou,1,7,24,1,37,249,6,1,0.142857143,0,64,55,8,7,11,1,Non-Responding,1.821428571,1,25.89285714,1,TRUE,TRUE,FALSE,HLA-A31:01;HLA-A02:01,FALSE,HLA-B07:02;HLA-B15:01,FALSE,HLA-C07:02;HLA-C03:04,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*04:01,FALSE,DQA1*01:02:01;DQA1*03:01:01,FALSE,DQB1*06:02;DQB1*03:02,FALSE,DRB1*15:01;DRB1*04:01,FALSE,0,0,45.81917808,2,0,Never Smoker,Anti-PD1 (nivolumab),,
CGLU193,NSCLC,Anagnostou,0,9,95,0,39,763,7,2,0.222222222,0,297,280,17,39,54,1,Non-Responding,0.964285714,1,2.25,1,TRUE,TRUE,TRUE,HLA-A02:01,FALSE,HLA-B45:01;HLA-B44:02,FALSE,HLA-C05:01;HLA-C06:02,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*02:01;DQA1*03:03:01,FALSE,DQB1*03:01;DQB1*02:02,FALSE,DRB1*07:01;DRB1*04:01,FALSE,1,5,64.8630137,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU197,NSCLC,Anagnostou,0,0,2,0,0,7,,0,,,11,,,2,2,0,Responding,7.821428571,1,38.39285714,0,TRUE,TRUE,FALSE,HLA-A03:01;HLA-A02:01,FALSE,HLA-B41:02;HLA-B07:02,FALSE,HLA-C07:02;HLA-C17:01,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*01:01:01;DQA1*05:05:01,FALSE,DQB1*03:01;DQB1*05:01,FALSE,DRB1*01:01;DRB1*13:03,FALSE,0,0,68.13150685,2,0,Never Smoker,Anti-PD1 (nivolumab),,
CGLU198,NSCLC,Anagnostou,0,0,0,0,0,0,,0,,,9,,,1,1,0,Non-Responding,2.785714286,0,2.785714286,1,FALSE,FALSE,FALSE,HLA-A33:03;HLA-A32:01,FALSE,HLA-B15:17;HLA-B44:03,TRUE,HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*01:02:01,TRUE,DQB1*06:04,TRUE,DRB1*13:02,TRUE,0,0,60.30136986,0,0,Never Smoker,Anti-PD1 (nivolumab),,
CGLU199,NSCLC,Anagnostou,0,0,16,0,0,99,0,0,,0,59,54,5,9,11,0,Non-Responding,1.821428571,1,9.214285714,1,FALSE,FALSE,FALSE,HLA-A02:07;HLA-A11:01,FALSE,HLA-B46:01;HLA-B15:01,FALSE,HLA-C12:02;HLA-C01:02,DPA1*02:02:02,TRUE,DPB1*02:02;DPB1*05:01,FALSE,DQA1*03:02,TRUE,DQB1*03:03,TRUE,DRB1*09:01,TRUE,0,0,60.84657534,0,0,Never Smoker,Anti-PD1 (nivolumab),,
CGLU200,NSCLC,Anagnostou,0,6,20,0,16,191,6,0,0,0,73,72,0,8,13,1,Non-Responding,0.714285714,0,0.714285714,1,TRUE,TRUE,FALSE,HLA-A68:01;HLA-A03:01,FALSE,HLA-B07:02;HLA-B35:03,FALSE,HLA-C04:01;HLA-C07:02,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*01:02:01;DQA1*01:02:02,FALSE,DQB1*06:02;DQB1*03:02,FALSE,DRB1*15:01;DRB1*04:03,FALSE,0,0,54.42465753,2,0,Never Smoker,Anti-PD1 (nivolumab),,
CGLU201,NSCLC,Anagnostou,1,9,74,6,41,548,8,1,0.111111111,0,257,232,23,26,46,3,Non-Responding,1.821428571,1,2.5,0,FALSE,FALSE,FALSE,HLA-A24:02;HLA-A01:01,TRUE,HLA-B08:01,TRUE,HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*01:01,FALSE,DQA1*05:01:01,TRUE,DQB1*02:01,TRUE,DRB1*03:01,TRUE,0,0,50.82739726,0,2,Current Smoker,Anti-PD1 (nivolumab),,
CGLU203,NSCLC,Anagnostou,0,5,28,0,12,225,4,1,0.2,0,97,69,28,14,18,1,Non-Responding,1.75,1,3.928571429,0,TRUE,TRUE,FALSE,HLA-A24:02;HLA-A01:01,FALSE,HLA-B40:01;HLA-B37:01,FALSE,HLA-C06:02;HLA-C03:04,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*10:01;DPB1*06:01,FALSE,DQA1*02:01;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*02:02,FALSE,DRB1*07:01;DRB1*04:04,FALSE,,NE,64.67945205,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU208,NSCLC,Anagnostou,0,1,27,0,2,134,1,0,0,0,95,89,6,16,23,0,Responding,19.5,1,25.03571429,1,TRUE,TRUE,FALSE,HLA-A29:02;HLA-A02:01,FALSE,HLA-B35:03;HLA-B44:03,FALSE,HLA-C04:01;HLA-C16:01,DPA1*02:01:01,TRUE,DPB1*11:01;DPB1*04:01,FALSE,DQA1*05:05:01;DQA1*02:01,FALSE,DQB1*03:01;DQB1*02:02,FALSE,DRB1*07:01;DRB1*12:01,FALSE,1,10,66.8109589,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU211,NSCLC,Anagnostou,0,11,47,0,46,460,11,0,0,0,135,134,1,23,30,3,Responding,10.71428571,1,28,0,FALSE,FALSE,FALSE,HLA-A68:02;HLA-A74:01,FALSE,HLA-B07:05;HLA-B15:10,FALSE,HLA-C15:05;HLA-C03:04,DPA1*03:01;DPA1*01:03:01,FALSE,DPB1*40:01;DPB1*105:01,FALSE,DQA1*01:02:01,TRUE,DQB1*06:02,TRUE,DRB1*15:03,TRUE,1,40,71.15068493,0,2,Current Smoker,Anti-PD1 (nivolumab),,
CGLU212,NSCLC,Anagnostou,1,13,106,6,37,791,13,0,0,0,311,295,16,55,78,3,Responding,12.25,0,12.25,0,TRUE,TRUE,FALSE,HLA-A25:01;HLA-A03:01,FALSE,HLA-B44:02;HLA-B15:01,FALSE,HLA-C03:03;HLA-C05:01,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*01:03:01;DQA1*03:03:01,FALSE,DQB1*06:03;DQB1*03:02,FALSE,DRB1*13:01;DRB1*04:01,FALSE,2,50,57.1260274,2,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU213,NSCLC,Anagnostou,2,21,131,2,53,1100,21,0,0,0,392,390,2,59,87,9,Non-Responding,0.714285714,1,7.535714286,0,TRUE,TRUE,FALSE,HLA-A29:02;HLA-A02:01,FALSE,HLA-B14:02;HLA-B57:01,FALSE,HLA-C06:02;HLA-C08:02,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*05:05:01;DQA1*02:01,FALSE,DQB1*03:01;DQB1*03:03,FALSE,DRB1*07:01;DRB1*13:03,FALSE,2,50,83.94520548,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU227,NSCLC,Anagnostou,1,2,18,2,6,151,2,0,0,0,51,46,4,9,20,1,Responding,9.928571429,1,21.75,0,TRUE,TRUE,FALSE,HLA-A02:05;HLA-A30:02,FALSE,HLA-B27:05;HLA-B49:01,FALSE,HLA-C07:01;HLA-C02:02,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*04:01,FALSE,DQA1*01:02:01;DQA1*05:01:01,FALSE,DQB1*06:02;DQB1*02:01,FALSE,DRB1*15:01;DRB1*03:01,FALSE,2,50,67.72328767,2,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU229,NSCLC,Anagnostou,0,0,0,0,0,0,,0,,,3,,,0,0,,Non-Responding,1.535714286,1,2.928571429,1,TRUE,TRUE,FALSE,HLA-A26:01;HLA-A31:01,FALSE,HLA-B07:02;HLA-B51:01,FALSE,HLA-C14:02;HLA-C07:02,DPA1*01:03:01,TRUE,DPB1*04:02,TRUE,DQA1*01:01:01;DQA1*04:01:01,FALSE,DQB1*05:01;DQB1*04:02,FALSE,DRB1*01:01;DRB1*08:02,FALSE,2,70,69.21917808,0,0,Never Smoker,Anti-PD1 (nivolumab),,
CGLU230,NSCLC,Anagnostou,1,6,23,1,11,168,6,0,0,0,73,68,5,11,15,0,Non-Responding,5.5,1,13.28571429,0,TRUE,TRUE,FALSE,HLA-A24:02;HLA-A11:01,FALSE,HLA-B15:21;HLA-B38:02,FALSE,HLA-C04:03;HLA-C07:27,DPA1*02:02:02,TRUE,DPB1*135:01;DPB1*01:01,FALSE,DQA1*01:03:01;DQA1*01:02:01,FALSE,DQB1*06:01;DQB1*05:02,FALSE,DRB1*08:03;DRB1*15:02,FALSE,1,5,62.49863014,0,0,Never Smoker,Anti-PD1 (nivolumab),,
CGLU231,NSCLC,Anagnostou,0,2,14,0,4,95,2,0,0,0,46,41,5,6,9,0,Non-Responding,3.75,1,18.28571429,1,TRUE,TRUE,FALSE,HLA-A26:01;HLA-A68:01,FALSE,HLA-B44:02;HLA-B38:01,FALSE,HLA-C07:04;HLA-C12:03,DPA1*01:03:01,TRUE,DPB1*04:02;DPB1*01:01,FALSE,DQA1*05:01:01;DQA1*01:04:01,FALSE,DQB1*05:03;DQB1*02:01,FALSE,DRB1*14:54;DRB1*03:01,FALSE,2,80,50.06575342,2,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU232,NSCLC,Anagnostou,0,2,17,0,12,166,2,0,0,0,36,28,8,4,10,1,Non-Responding,1.714285714,1,2.642857143,1,TRUE,TRUE,TRUE,HLA-A02:01,TRUE,HLA-B44:02,TRUE,HLA-C05:01,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*01:02:01;DQA1*03:03:01,FALSE,DQB1*03:01;DQB1*06:02,FALSE,DRB1*15:01;DRB1*04:01,FALSE,2,100,72.76986301,2,0,Never Smoker,Anti-PD1 (nivolumab),,
CGLU233,NSCLC,Anagnostou,1,9,66,1,19,569,9,0,0,0,195,189,4,29,42,4,Responding,14,1,17.25,0,TRUE,TRUE,FALSE,HLA-A33:03;HLA-A02:11,FALSE,HLA-B15:18;HLA-B40:06,FALSE,HLA-C07:04;HLA-C15:02,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*04:01;DPB1*09:01,FALSE,DQA1*01:05;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*05:01,FALSE,DRB1*10:01;DRB1*04:03,FALSE,,NE,80.32328767,2,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU240,NSCLC,Anagnostou,2,30,139,11,124,1215,28,2,0.066666667,0,482,413,63,79,109,10,Responding,13.10714286,1,13.10714286,0,FALSE,TRUE,FALSE,HLA-A24:02;HLA-A11:03,FALSE,HLA-B35:01;HLA-B52:01,FALSE,HLA-C03:03;HLA-C07:02,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*02:01;DPB1*14:01,FALSE,DQA1*01:02:01,TRUE,DQB1*06:02;DQB1*05:02,FALSE,DRB1*15:01;DRB1*15:04,FALSE,,NE,60.12054795,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU243,NSCLC,Anagnostou,0,1,12,0,5,135,1,0,0,0,37,32,3,6,12,0,Non-Responding,2.392857143,1,5.214285714,1,TRUE,TRUE,FALSE,HLA-A02:07;HLA-A33:03,FALSE,HLA-B58:01;HLA-B46:01,FALSE,HLA-C03:02;HLA-C01:02,DPA1*01:03:01;DPA1*02:02:02,FALSE,DPB1*05:01;DPB1*04:02,FALSE,DQA1*05:05:01;DQA1*03:03:01,FALSE,DQB1*04:01;DQB1*03:50,FALSE,DRB1*04:05;DRB1*13:02,FALSE,2,100,73.10684932,0,0,Never Smoker,Anti-PD1 (nivolumab),,
CGLU244,NSCLC,Anagnostou,0,13,64,0,41,564,11,2,0.153846154,0,203,189,14,33,57,4,Non-Responding,5.357142857,1,7.642857143,1,FALSE,TRUE,FALSE,HLA-A33:03;HLA-A25:01,FALSE,HLA-B18:01;HLA-B44:02,FALSE,HLA-C07:04;HLA-C12:03,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:02,FALSE,DQA1*01:02:01,TRUE,DQB1*06:02;DQB1*06:04,FALSE,DRB1*15:01;DRB1*13:02,FALSE,2,70,63.06575342,0,1,Former Smoker,Anti-PD1 (pembrolizumab),,
CGLU246,NSCLC,Anagnostou,2,6,29,14,42,308,6,0,0,0,76,76,0,13,20,2,Responding,20.17857143,0,20.17857143,0,TRUE,TRUE,FALSE,HLA-A32:01;HLA-A03:01,FALSE,HLA-B40:01;HLA-B18:01,FALSE,HLA-C03:04;HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*05:05:01;DQA1*03:01:01,FALSE,DQB1*03:01;DQB1*03:02,FALSE,DRB1*11:04;DRB1*04:04,FALSE,1,5,76.65205479,0,1,Former Smoker,Dual ICB (anti-PD1+anti-CTLA4),,
CGLU247,NSCLC,Anagnostou,1,6,26,3,46,297,6,0,0,0,74,72,2,10,14,1,Non-Responding,2.571428571,0,2.571428571,1,TRUE,TRUE,FALSE,HLA-A31:01;HLA-A01:01,FALSE,HLA-B40:01;HLA-B07:02,FALSE,HLA-C07:02;HLA-C03:04,DPA1*01:03:01,TRUE,DPB1*06:01;DPB1*04:02,FALSE,DQA1*01:02:01;DQA1*03:01:01,FALSE,DQB1*06:02;DQB1*03:02,FALSE,DRB1*15:01;DRB1*04:04,FALSE,1,10,81.79452055,2,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU248,NSCLC,Anagnostou,1,9,55,2,40,526,9,0,0,0,161,146,15,25,32,3,Non-Responding,1.5,1,5.642857143,1,TRUE,TRUE,FALSE,HLA-A03:01;HLA-A02:01,FALSE,HLA-B07:02;HLA-B37:01,FALSE,HLA-C06:02;HLA-C07:02,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*02:01;DQA1*01:02:01,FALSE,DQB1*06:02;DQB1*03:03,FALSE,DRB1*15:01;DRB1*07:01,FALSE,2,60,66.91232877,1,1,Former Smoker,Dual ICB (anti-PD1+anti-CTLA4),,
CGLU252,NSCLC,Anagnostou,0,6,33,0,9,220,,6,,,113,,,13,20,2,Responding,10.10714286,0,10.10714286,1,FALSE,FALSE,FALSE,HLA-A23:01;HLA-A03:01,FALSE,HLA-B07:02;HLA-B44:03,FALSE,HLA-C04:01;HLA-C07:02,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*02:01,TRUE,DQB1*02:02,TRUE,DRB1*07:01,TRUE,,NE,66.8739726,0,1,Former Smoker,Dual ICB (anti-PD1+anti-CTLA4),,
CGLU257,NSCLC,Anagnostou,0,2,5,0,2,36,,2,,,35,,,3,6,2,Non-Responding,1.428571429,1,15.10714286,1,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A02:01,FALSE,HLA-B07:02;HLA-B14:02,FALSE,HLA-C07:02;HLA-C08:02,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*15:01,FALSE,DQA1*02:01;DQA1*01:02:01,FALSE,DQB1*06:02;DQB1*02:02,FALSE,DRB1*15:01;DRB1*07:01,FALSE,,NE,73.92054795,1,0,Never Smoker,Dual ICB (anti-PD1+anti-CTLA4),,
CGLU260,NSCLC,Anagnostou,0,5,32,0,22,252,5,0,0,0,98,94,4,16,23,2,Non-Responding,1.107142857,1,1.214285714,0,TRUE,TRUE,FALSE,HLA-A29:02;HLA-A02:01,FALSE,HLA-B44:02;HLA-B44:03,FALSE,HLA-C05:01;HLA-C16:01,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*02:01;DQA1*01:03:01,FALSE,DQB1*06:03;DQB1*02:02,FALSE,DRB1*07:01;DRB1*13:01,FALSE,,NE,78.83561644,1,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU262,NSCLC,Anagnostou,0,6,30,0,27,249,6,0,0,0,95,89,6,12,16,2,Non-Responding,2.25,1,19,0,TRUE,TRUE,TRUE,HLA-A02:01,FALSE,HLA-B40:01;HLA-B51:01,FALSE,HLA-C05:01;HLA-C03:04,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*06:01,FALSE,DQA1*03:02;DQA1*03:01:01,FALSE,DQB1*03:03;DQB1*03:02,FALSE,DRB1*09:01;DRB1*04:04,FALSE,1,5,71.72054795,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU266,NSCLC,Anagnostou,0,2,9,0,4,80,2,0,0,0,34,32,2,3,4,0,Responding,23.39285714,1,42.75,0,TRUE,TRUE,TRUE,HLA-A02:01,FALSE,HLA-B40:01;HLA-B44:02,FALSE,HLA-C05:01;HLA-C03:04,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*04:01;DPB1*14:01,FALSE,DQA1*01:01:01;DQA1*01:03:01,FALSE,DQB1*06:03;DQB1*05:01,FALSE,DRB1*01:01;DRB1*13:01,FALSE,2,100,70.81643836,0,0,Never Smoker,Anti-PD1 (nivolumab),,
CGLU268,NSCLC,Anagnostou,4,28,164,7,115,1407,28,0,0,0,491,477,14,83,111,11,Responding,20.82142857,0,20.82142857,0,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A02:01,FALSE,HLA-B07:02;HLA-B57:01,FALSE,HLA-C06:02;HLA-C07:02,DPA1*01:03:01;DPA1*02:02:02,FALSE,DPB1*02:01;DPB1*05:01,FALSE,DQA1*05:05:01;DQA1*01:02:01,FALSE,DQB1*03:01;DQB1*06:02,FALSE,DRB1*15:01;DRB1*11:01,FALSE,1,10,50.83835616,2,1,Former Smoker,Dual ICB (anti-PD1+anti-CTLA4),,
CGLU270,NSCLC,Anagnostou,2,15,123,5,49,751,15,0,0,0,356,319,35,40,54,5,Responding,28.71428571,0,28.71428571,0,TRUE,TRUE,FALSE,HLA-A24:02;HLA-A02:01,FALSE,HLA-B40:01;HLA-B07:02,FALSE,HLA-C07:02;HLA-C03:04,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*04:01,FALSE,DQA1*05:05:01;DQA1*04:01:01,FALSE,DQB1*03:01;DQB1*04:02,FALSE,DRB1*11:04;DRB1*08:01,FALSE,2,90,60.60273973,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU274,NSCLC,Anagnostou,0,11,43,0,34,400,8,3,0.272727273,0,140,128,12,17,24,4,Responding,6.5,0,6.5,0,TRUE,TRUE,FALSE,HLA-A26:01;HLA-A68:01,FALSE,HLA-B07:02;HLA-B51:01,FALSE,HLA-C15:06;HLA-C07:02,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*02:01,FALSE,DQA1*01:03:01;DQA1*01:02:01,FALSE,DQB1*06:03;DQB1*06:04,FALSE,DRB1*13:02;DRB1*13:01,FALSE,,NE,73.78082192,0,2,Current Smoker,Anti-PD1 (pembrolizumab),,
CGLU286,NSCLC,Anagnostou,0,1,4,0,4,27,,1,,,15,,,3,4,0,Non-Responding,6.142857143,1,14.03571429,1,TRUE,TRUE,FALSE,HLA-A32:01;HLA-A01:01,FALSE,HLA-B07:02;HLA-B18:01,FALSE,HLA-C07:02;HLA-C07:01,DPA1*01:03:01;DPA1*02:02:02,FALSE,DPB1*05:01;DPB1*06:01,FALSE,DQA1*01:01:01;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*05:01,FALSE,DRB1*04:04;DRB1*01:03,FALSE,,NE,48.21369863,2,0,Never Smoker,Dual ICB (anti-PD1+anti-CTLA4),,
CGLU287,NSCLC,Anagnostou,0,12,51,0,29,396,12,0,0,0,158,149,9,20,24,3,Non-Responding,2.678571429,1,2.678571429,1,TRUE,FALSE,FALSE,HLA-A01:01;HLA-A03:01,FALSE,HLA-B07:02;HLA-B44:02,FALSE,HLA-C05:01;HLA-C07:02,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*01:03:01;DQA1*01:02:01,FALSE,DQB1*06:02,TRUE,DRB1*15:01;DRB1*13:01,FALSE,0,0,73.09315068,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU288,NSCLC,Anagnostou,0,3,56,0,10,387,2,1,0.333333333,0,197,59,137,31,39,0,Non-Responding,1.071428571,1,5.035714286,1,TRUE,TRUE,FALSE,HLA-A03:01;HLA-A02:01,FALSE,HLA-B07:02;HLA-B51:01,FALSE,HLA-C07:02;HLA-C02:02,DPA1*01:03:01,TRUE,DPB1*15:01;DPB1*06:01,FALSE,DQA1*05:05:01;DQA1*01:02:01,FALSE,DQB1*03:01;DQB1*06:02,FALSE,DRB1*15:01;DRB1*11:01,FALSE,0,0,54.47945205,2,0,Never Smoker,Anti-PD1 (pembrolizumab),,
CGLU289,NSCLC,Anagnostou,2,17,85,2,46,710,16,1,0.058823529,0,281,257,23,44,71,8,Responding,15.10714286,0,15.10714286,1,TRUE,FALSE,FALSE,HLA-A24:02;HLA-A02:01,FALSE,HLA-B27:05;HLA-B44:02,FALSE,HLA-C05:01;HLA-C01:02,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*04:02,FALSE,DQA1*05:05:01;DQA1*03:03:01,FALSE,DQB1*03:01,TRUE,DRB1*04:01;DRB1*11:02,FALSE,2,90,64.31506849,0,2,Current Smoker,Anti-PD1 (pembrolizumab),,
CGLU295,NSCLC,Anagnostou,0,0,6,0,0,30,0,0,,0,17,14,3,2,3,0,Non-Responding,3.5,0,3.5,1,TRUE,TRUE,FALSE,HLA-A24:02;HLA-A29:02,FALSE,HLA-B07:02;HLA-B38:01,FALSE,HLA-C12:03;HLA-C07:02,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*05:01;DPB1*04:01,FALSE,DQA1*02:01;DQA1*01:02:01,FALSE,DQB1*06:02;DQB1*02:02,FALSE,DRB1*15:01;DRB1*07:01,FALSE,2,60,77.22191781,1,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU299,NSCLC,Anagnostou,0,1,4,0,4,24,1,0,0,0,7,5,2,1,1,0,Non-Responding,3.464285714,1,6.75,0,TRUE,TRUE,FALSE,HLA-A68:01;HLA-A30:02,FALSE,HLA-B27:03;HLA-B15:03,FALSE,HLA-C07:02;HLA-C02:10,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*11:01;DPB1*105:01,FALSE,DQA1*05:05:01;DQA1*02:01,FALSE,DQB1*03:01;DQB1*02:02,FALSE,DRB1*07:01;DRB1*12:01,FALSE,2,90,58.26575342,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU304,NSCLC,Anagnostou,0,4,33,0,17,297,4,0,0,0,120,118,0,25,34,1,Non-Responding,2,1,7.964285714,1,TRUE,TRUE,FALSE,HLA-A68:02;HLA-A30:02,FALSE,HLA-B07:02;HLA-B18:01,FALSE,HLA-C15:05;HLA-C05:01,DPA1*01:03:01;DPA1*02:02:02,FALSE,DPB1*02:01;DPB1*01:01,FALSE,DQA1*01:02:01;DQA1*05:01:01,FALSE,DQB1*06:02;DQB1*02:01,FALSE,DRB1*15:03;DRB1*03:01,FALSE,1,20,81.07945205,2,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU305,NSCLC,Anagnostou,0,1,5,0,2,40,,1,,,16,,,2,2,1,Non-Responding,3.607142857,1,15.71428571,0,TRUE,TRUE,FALSE,HLA-A03:01;HLA-A02:01,FALSE,HLA-B07:02;HLA-B15:01,FALSE,HLA-C03:03;HLA-C07:02,DPA1*01:03:01,TRUE,DPB1*04:02,TRUE,DQA1*01:03:01;DQA1*03:01:01,FALSE,DQB1*06:03;DQB1*03:02,FALSE,DRB1*13:01;DRB1*04:01,FALSE,0,0,55.40821918,2,1,Former Smoker,Anti-PD1 (pembrolizumab),,
CGLU307,NSCLC,Anagnostou,0,2,16,0,2,101,2,0,0,0,40,40,0,5,7,0,Non-Responding,1.607142857,1,18.60714286,0,TRUE,TRUE,TRUE,HLA-A02:01,FALSE,HLA-B07:02;HLA-B15:01,FALSE,HLA-C03:03;HLA-C07:02,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*05:05:01;DQA1*01:02:01,FALSE,DQB1*03:01;DQB1*06:02,FALSE,DRB1*15:01;DRB1*11:01,FALSE,,NE,65.71780822,2,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU309,NSCLC,Anagnostou,2,7,59,12,56,611,7,0,0,0,184,177,5,25,33,3,Non-Responding,1.178571429,1,2.714285714,1,TRUE,TRUE,FALSE,HLA-A03:01;HLA-A29:02,FALSE,HLA-B41:01;HLA-B14:02,FALSE,HLA-C08:02;HLA-C17:01,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*15:01,FALSE,DQA1*02:01;DQA1*03:03:01,FALSE,DQB1*02:02;DQB1*04:02,FALSE,DRB1*07:01;DRB1*04:04,FALSE,2,100,84.58630137,0,1,Former Smoker,Anti-PD1 (pembrolizumab),,
CGLU310,NSCLC,Anagnostou,0,12,73,0,28,728,12,0,0,0,238,238,0,37,61,8,Responding,14.25,0,14.25,0,TRUE,TRUE,FALSE,HLA-A23:01;HLA-A02:01,FALSE,HLA-B35:01;HLA-B53:01,FALSE,HLA-C04:01;HLA-C16:01,DPA1*01:03:01,TRUE,DPB1*13:01;DPB1*18:01,FALSE,DQA1*02:01;DQA1*01:02:01,FALSE,DQB1*06:02;DQB1*02:02,FALSE,DRB1*15:03;DRB1*07:01,FALSE,2,100,56.03835616,1,2,Current Smoker,Anti-PD1 (pembrolizumab),,
CGLU311,NSCLC,Anagnostou,8,36,187,24,165,1614,35,1,0.027777778,0,582,522,58,96,148,13,Responding,15.60714286,0,15.60714286,0,TRUE,TRUE,FALSE,HLA-A36:01;HLA-A02:01,FALSE,HLA-B53:01;HLA-B45:01,FALSE,HLA-C04:01;HLA-C16:01,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*02:01;DPB1*11:01,FALSE,DQA1*05:05:01;DQA1*01:02:01,FALSE,DQB1*03:01;DQB1*06:02,FALSE,DRB1*11:01;DRB1*12:01,FALSE,2,80,69.04657534,2,2,Current Smoker,Anti-PD1 (pembrolizumab),,
CGLU327,NSCLC,Anagnostou,0,4,13,0,8,161,,4,,,32,,,5,10,2,Responding,14,0,14,0,TRUE,TRUE,TRUE,HLA-A02:01,FALSE,HLA-B40:01;HLA-B48:01,FALSE,HLA-C04:01;HLA-C08:01,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*14:01;DPB1*04:02,FALSE,DQA1*03:02;DQA1*01:04:01,FALSE,DQB1*03:03;DQB1*05:02,FALSE,DRB1*09:01;DRB1*14:54,FALSE,0,0,74.83013699,2,1,Former Smoker,Anti-PD1 (pembrolizumab),,
CGLU329,NSCLC,Anagnostou,0,6,23,0,20,232,,6,,,92,,,10,13,1,Responding,13.85714286,0,13.85714286,0,TRUE,TRUE,FALSE,HLA-A31:01;HLA-A02:01,FALSE,HLA-B40:01;HLA-B07:02,FALSE,HLA-C05:01;HLA-C07:02,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*04:02,FALSE,DQA1*01:01:01;DQA1*01:02:01,FALSE,DQB1*06:02;DQB1*05:01,FALSE,DRB1*15:01;DRB1*01:01,FALSE,2,80,67.68767123,0,1,Former Smoker,Anti-PD1 (pembrolizumab),,
CGLU334,NSCLC,Anagnostou,0,2,7,0,6,59,,2,,,19,,,3,4,0,Responding,29,0,29,0,TRUE,TRUE,FALSE,HLA-A25:01;HLA-A03:01,FALSE,HLA-B39:01;HLA-B51:01,FALSE,HLA-C03:03;HLA-C12:03,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*03:02;DQA1*01:02:02,FALSE,DQB1*03:03;DQB1*05:02,FALSE,DRB1*09:01;DRB1*16:01,FALSE,2,70,72.45753425,2,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU337,NSCLC,Anagnostou,4,40,244,4,169,1953,40,0,0,0,734,698,35,72,93,9,Responding,13.64285714,0,13.64285714,0,TRUE,FALSE,TRUE,HLA-A02:01,FALSE,HLA-B35:03;HLA-B44:02,FALSE,HLA-C16:04;HLA-C04:01,DPA1*01:03:01,TRUE,DPB1*02:01,TRUE,DQA1*05:03;DQA1*05:05:01,FALSE,DQB1*03:01,TRUE,DRB1*11:04;DRB1*13:104,FALSE,1,5,57.55068493,0,1,Former Smoker,Anti-PD1 + Chemotherapy,,
CGLU341,NSCLC,Anagnostou,0,28,152,0,66,1157,25,3,0.107142857,0,486,425,61,69,82,7,Responding,12.75,0,12.75,0,TRUE,TRUE,FALSE,HLA-A03:01;HLA-A02:01,FALSE,HLA-B49:01;HLA-B18:01,TRUE,HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*13:01;DPB1*04:02,FALSE,DQA1*05:05:01;DQA1*01:04:01,FALSE,DQB1*03:19;DQB1*05:03,FALSE,DRB1*14:54;DRB1*11:02,FALSE,0,0,63.64931507,2,2,Current Smoker,Anti-PD1 + Chemotherapy,,
CGLU348,NSCLC,Anagnostou,3,12,75,6,63,640,12,0,0,0,178,162,16,39,58,8,,2.75,0,2.75,0,TRUE,TRUE,FALSE,HLA-A02:01;HLA-A30:01,FALSE,HLA-B53:01;HLA-B15:01,FALSE,HLA-C04:01;HLA-C01:02,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*15:01,FALSE,DQA1*02:01;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*02:02,FALSE,DRB1*13:03;DRB1*04:01,FALSE,0,0,63.14520548,0,1,Former Smoker,Anti-PD1 (pembrolizumab),,
CGLU389,NSCLC,Anagnostou,1,5,34,4,41,297,4,0,0,1,121,113,5,20,38,2,Non-Responding,3,1,9.25,0,TRUE,FALSE,FALSE,HLA-A23:01;HLA-A66:03,FALSE,HLA-B81:01;HLA-B44:03,FALSE,HLA-C04:01;HLA-C18:01,DPA1*02:02:02,TRUE,DPB1*01:01,TRUE,DQA1*01:01:01;DQA1*01:01:02,FALSE,DQB1*05:01,TRUE,DRB1*01:02;DRB1*14:54,FALSE,0,0,61.25753425,0,1,Former Smoker,Anti-PD1 (pembrolizumab),,
CGLU436,NSCLC,Anagnostou,0,2,12,0,4,98,2,0,0,0,43,39,4,4,7,0,Non-Responding,2.5,1,2.5,1,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A02:01,FALSE,HLA-B08:01;HLA-B44:02,FALSE,HLA-C05:01;HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*01:01,FALSE,DQA1*05:01:01;DQA1*03:03:01,FALSE,DQB1*03:01;DQB1*02:01,FALSE,DRB1*04:01;DRB1*03:01,FALSE,0,0,52.13150685,0,0,Never Smoker,Anti-PD1 (pembrolizumab),,
CGLU510,NSCLC,Anagnostou,1,11,44,2,48,493,11,0,0,0,125,120,5,17,25,2,Responding,11.25,1,15.64285714,0,TRUE,TRUE,FALSE,HLA-A02:05;HLA-A30:01,FALSE,HLA-B50:01;HLA-B51:01,FALSE,HLA-C06:02;HLA-C15:02,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*02:01;DQA1*01:02:01,FALSE,DQB1*06:02;DQB1*02:02,FALSE,DRB1*15:01;DRB1*07:01,FALSE,2,50,61,1,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU512,NSCLC,Anagnostou,1,6,36,3,30,292,6,0,0,0,88,82,6,12,31,3,Responding,8.928571429,1,26.5,0,TRUE,TRUE,FALSE,HLA-A26:01;HLA-A03:01,FALSE,HLA-B18:01;HLA-B38:01,FALSE,HLA-C05:01;HLA-C12:03,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*03:01;DPB1*05:01,FALSE,DQA1*05:01:01;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*02:01,FALSE,DRB1*04:02;DRB1*03:01,FALSE,2,80,66,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU514,NSCLC,Anagnostou,0,3,63,0,12,548,3,0,0,0,186,177,9,23,28,0,Responding,10.03571429,1,27.92857143,0,TRUE,TRUE,TRUE,HLA-A03:01,FALSE,HLA-B38:01;HLA-B51:01,TRUE,HLA-C12:03,DPA1*01:03:01,TRUE,DPB1*02:01,TRUE,DQA1*01:01:02;DQA1*01:02:02,FALSE,DQB1*05:02;DQB1*05:01,FALSE,DRB1*16:01;DRB1*01:02,FALSE,0,0,73,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU515,NSCLC,Anagnostou,3,26,227,10,94,1776,26,0,0,0,771,770,0,136,179,7,Responding,19,1,30.53571429,0,TRUE,TRUE,FALSE,HLA-A11:01;HLA-A02:01,FALSE,HLA-B07:02;HLA-B44:03,FALSE,HLA-C07:02;HLA-C16:01,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*02:01;DQA1*01:02:01,FALSE,DQB1*06:02;DQB1*02:02,FALSE,DRB1*15:01;DRB1*07:01,FALSE,1,5,74,1,1,Former Smoker ,Anti-PD1 (nivolumab),,
CGLU519,NSCLC,Anagnostou,1,15,110,3,36,947,14,1,0.066666667,0,347,334,13,45,73,3,Non-Responding,2.214285714,1,3.285714286,1,FALSE,FALSE,FALSE,HLA-A24:02;HLA-A68:01,FALSE,HLA-B13:01;HLA-B15:25,FALSE,HLA-C04:03;HLA-C07:01,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:02,FALSE,DQA1*03:01:01,TRUE,DQB1*03:02,TRUE,DRB1*04:04;DRB1*04:03,FALSE,0,0,54,0,1,Former Smoker,Anti-PD1 (nivolumab),,
CGLU521,NSCLC,Anagnostou,8,39,214,22,168,1794,36,3,0.076923077,0,643,607,31,94,128,14,Responding,10.03571429,0,10.03571429,0,TRUE,TRUE,FALSE,HLA-A01:01;HLA-A03:01,FALSE,HLA-B07:02;HLA-B57:01,FALSE,HLA-C06:02;HLA-C07:02,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*13:01;DPB1*04:01,FALSE,DQA1*05:05:01;DQA1*02:01,FALSE,DQB1*03:01;DQB1*03:03,FALSE,DRB1*07:01;DRB1*11:01,FALSE,1,1,46,0,1,Former Smoker,Anti-PD1 (nivolumab),,
AL4602,NSCLC,Rizvi,0,1,13,0,1,112,,,,,31,,,7,13,0,Responding,8.366666667,0,,,FALSE,TRUE,FALSE,A*03:01;A*32:01,FALSE,B*08:01;B*51:01,FALSE,C*15:02;C*07:02,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*01:01:01,TRUE,DQB1*03:02;DQB1*05:01,FALSE,DRB1*01:01;DRB1*04:02,FALSE,2,Strong,59,1,1,Former,Anti-PD1 (pembrolizumab),,
AU5884,NSCLC,Rizvi,0,1,4,0,3,48,,,,,8,,,2,2,0,Non-Responding,1.833333333,1,,,TRUE,TRUE,FALSE,A*24:02;A*02:01,FALSE,B*51:01;B*13:02,FALSE,C*06:02;C*15:02,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*04:01;DPB1*09:01,FALSE,DQA1*05:05:01;DQA1*02:01,FALSE,DQB1*03:01;DQB1*02:02,FALSE,DRB1*07:01;DRB1*11:03,FALSE,1,Weak,64,0,1,Former,Anti-PD1 (pembrolizumab),,
BL3403,NSCLC,Rizvi,0,0,5,0,0,37,0,0,,0,17,17,0,2,2,0,Non-Responding,6.5,1,,,TRUE,TRUE,FALSE,A*26:01;A*02:01,FALSE,B*44:02;B*35:01,FALSE,C*04:01;C*05:01,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*02:01;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*02:02,FALSE,DRB1*07:01;DRB1*04:02,FALSE,1,Weak,73,0,1,Former,Anti-PD1 (pembrolizumab),,
CA9903,NSCLC,Rizvi,1,15,88,1,51,1004,14,1,0.066666667,0,230,208,21,35,54,7,Responding,14.5,1,,,TRUE,TRUE,FALSE,A*11:173;A*02:01,FALSE,B*18:01;B*51:08,FALSE,C*07:01;C*16:02,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:02,FALSE,DQA1*05:05:01;DQA1*01:02:01,FALSE,DQB1*03:01;DQB1*06:04,FALSE,DRB1*11:04;DRB1*13:02,FALSE,2,Strong,57,2,1,Former,Anti-PD1 (pembrolizumab),,
CU9061,NSCLC,Rizvi,5,32,145,27,135,1583,28,2,0.0625,2,268,245,18,47,79,12,,3.966666667,0,,,TRUE,TRUE,FALSE,A*29:02;A*01:01,FALSE,B*44:03;B*38:01,FALSE,C*12:03;C*16:01,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*11:01;DPB1*04:01,FALSE,DQA1*02:01;DQA1*01:04:01,FALSE,DQB1*05:03;DQB1*02:02,FALSE,DRB1*07:01;DRB1*14:54,FALSE,1,Weak,57,1,1,Former,Anti-PD1 (pembrolizumab),,
DI6359,NSCLC,Rizvi,0,4,36,0,8,354,4,0,0,0,175,166,9,30,44,2,Responding,9.8,0,,,FALSE,FALSE,FALSE,A*11:01;A*03:01,FALSE,B*18:01;B*51:01,FALSE,C*12:03;C*15:04,DPA1*01:03:01,TRUE,DPB1*04:02,TRUE,DQA1*05:05:01,TRUE,DQB1*03:01,TRUE,DRB1*11:04,TRUE,2,Strong,61,0,2,Current,Anti-PD1 (pembrolizumab),,
DM123062,NSCLC,Rizvi,0,2,28,0,8,203,2,0,0,0,53,42,10,11,22,0,Non-Responding,1.9,1,,,TRUE,TRUE,FALSE,A*03:01;A*02:01,FALSE,B*18:01;B*40:02,FALSE,C*02:02;C*05:01,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*02:01,FALSE,DQA1*02:01;DQA1*01:03:01,FALSE,DQB1*06:03;DQB1*02:02,FALSE,DRB1*07:01;DRB1*13:01,FALSE,1,Weak,50,1,0,Never,Anti-PD1 (pembrolizumab),,
FR9547,NSCLC,Rizvi,0,12,69,0,39,644,10,2,0.166666667,0,202,192,9,39,59,6,,4.2,0,,,TRUE,TRUE,FALSE,A*24:02;A*02:01,FALSE,B*08:01;B*18:01,TRUE,C*07:01,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*04:02,FALSE,DQA1*05:05:01;DQA1*01:03:01,FALSE,DQB1*03:01;DQB1*06:01,FALSE,DRB1*11:04;DRB1*15:02,FALSE,2,Strong,65,2,2,Current,Anti-PD1 (pembrolizumab),,
GR0134,NSCLC,Rizvi,0,0,0,0,0,0,,0,,,0,,,0,0,,Responding,8.3,1,,,FALSE,TRUE,FALSE,A*02:01;A*33:01,FALSE,B*13:02;B*14:02,FALSE,C*06:02;C*08:02,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*04:02,FALSE,DQA1*01:01:02,TRUE,DQB1*02:02;DQB1*05:01,FALSE,DRB1*01:02;DRB1*07:01,FALSE,0,Negative,80,1,1,Former,Anti-PD1 (pembrolizumab),,
GR4788,NSCLC,Rizvi,1,6,24,2,13,183,,6,,,37,,,4,4,1,Non-Responding,1.866666667,1,,,TRUE,TRUE,FALSE,A*26:01;A*01:01,FALSE,B*37:01;B*35:01,FALSE,C*06:02;C*04:01,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*01:03:01;DQA1*03:01:01,FALSE,DQB1*06:03;DQB1*03:02,FALSE,DRB1*11:04;DRB1*04:02,FALSE,0,Negative,59,2,2,Current,Anti-PD1 (pembrolizumab),,
HE3202,NSCLC,Rizvi,4,54,253,12,211,2535,50,4,0.074074074,0,511,480,28,84,142,17,Responding,14.66666667,0,,,TRUE,TRUE,FALSE,A*32:01;A*24:03,FALSE,B*38:01;B*41:01,FALSE,C*12:03;C*17:01,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*11:01;DPB1*104:01,FALSE,DQA1*01:02:01;DQA1*05:01:01,FALSE,DQB1*06:04;DQB1*02:01,FALSE,DRB1*13:02;DRB1*03:01,FALSE,2,Strong,63,2,1,Former,Anti-PD1 (pembrolizumab),,
JB112852,NSCLC,Rizvi,0,4,20,0,8,286,4,0,0,0,31,20,11,7,14,1,Non-Responding,3.266666667,1,,,TRUE,TRUE,FALSE,A*11:01;A*02:01,FALSE,B*35:12;B*44:02,FALSE,C*04:01;C*07:04,DPA1*01:03:01,TRUE,DPB1*04:01;DPB1*04:02,FALSE,DQA1*05:05:01;DQA1*04:01:01,FALSE,DQB1*03:01;DQB1*04:02,FALSE,DRB1*08:02;DRB1*11:01,FALSE,0,Negative,60,0,0,Never,Anti-PD1 (pembrolizumab),,
KA3947,NSCLC,Rizvi,0,11,82,0,45,835,10,0,0,1,229,210,17,22,46,3,Responding,8.133333333,1,,,TRUE,TRUE,FALSE,A*24:02;A*23:01,FALSE,B*49:01;B*41:01,FALSE,C*07:01;C*17:01,DPA1*01:03:01,TRUE,DPB1*02:01,TRUE,DQA1*05:05:01;DQA1*01:02:01,FALSE,DQB1*03:01;DQB1*06:04,FALSE,DRB1*11:04;DRB1*13:02,FALSE,2,Strong,64,2,1,Former,Anti-PD1 (pembrolizumab),,
LO3793,NSCLC,Rizvi,0,2,3,0,6,61,,2,,,11,,,1,1,0,Non-Responding,3.5,1,,,TRUE,TRUE,FALSE,A*03:01;A*02:01,FALSE,B*49:01;B*27:05,FALSE,C*07:01;C*01:02,DPA1*01:03:01,TRUE,DPB1*138:01;DPB1*05:01,FALSE,DQA1*01:01:01;DQA1*01:02:01,FALSE,DQB1*06:04;DQB1*05:01,FALSE,DRB1*01:01;DRB1*13:02,FALSE,1,Weak,62,0,1,Former,Anti-PD1 (pembrolizumab),,
LO5004,NSCLC,Rizvi,0,2,6,0,12,115,2,0,0,0,21,21,0,5,7,2,Non-Responding,6.3,1,,,TRUE,TRUE,FALSE,A*26:01;A*02:01,FALSE,B*38:01;B*55:01,FALSE,C*12:03;C*03:03,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*13:01;DPB1*04:01,FALSE,DQA1*05:05:01;DQA1*01:04:01,FALSE,DQB1*03:01;DQB1*05:03,FALSE,DRB1*11:04;DRB1*14:54,FALSE,1,Weak,56,2,1,Former,Anti-PD1 (pembrolizumab),,
M4945,NSCLC,Rizvi,1,30,105,2,107,1104,24,6,0.2,0,199,165,34,37,52,7,Responding,14.6,0,,,TRUE,TRUE,FALSE,A*30:01;A*02:01,FALSE,B*44:03;B*13:02,FALSE,C*06:103;C*16:02,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*04:01;DPB1*14:01,FALSE,DQA1*02:01;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*02:02,FALSE,DRB1*07:01;DRB1*04:02,FALSE,,Unknown,66,0,1,Former,Anti-PD1 (pembrolizumab),,
MA7027,NSCLC,Rizvi,2,6,60,12,44,518,6,0,0,0,153,151,1,12,20,0,Non-Responding,1.8,1,,,TRUE,TRUE,TRUE,A*24:02,FALSE,B*51:08;B*07:02,FALSE,C*07:02;C*16:02,DPA1*01:03:01,TRUE,DPB1*04:02,TRUE,DQA1*05:05:01;DQA1*01:02:01,FALSE,DQB1*03:01;DQB1*06:04,FALSE,DRB1*11:01;DRB1*13:02,FALSE,1,Weak,56,2,1,Former,Anti-PD1 (pembrolizumab),,
NI9507,NSCLC,Rizvi,0,0,12,0,0,85,0,0,,0,23,23,0,1,2,0,Non-Responding,1.866666667,1,,,TRUE,TRUE,FALSE,A*11:01;A*02:01,TRUE,B*07:02,TRUE,C*07:02,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*01:03:01;DQA1*01:02:01,FALSE,DQB1*06:02;DQB1*06:03,FALSE,DRB1*15:01;DRB1*13:01,FALSE,1,Weak,41,0,2,Current,Anti-PD1 (pembrolizumab),,
R7495,NSCLC,Rizvi,0,2,25,0,9,201,2,0,0,0,58,47,11,10,12,1,Non-Responding,1.366666667,1,,,FALSE,TRUE,FALSE,A*11:01;A*02:01,FALSE,B*38:01;B*35:01,FALSE,C*12:03;C*04:01,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*02:01,FALSE,DQA1*01:03:01,TRUE,DQB1*03:01;DQB1*06:03,FALSE,DRB1*04:07;DRB1*13:01,FALSE,1,Weak,63,1,1,Former,Anti-PD1 (pembrolizumab),,
RH090935,NSCLC,Rizvi,0,6,31,0,20,240,6,0,0,0,85,80,4,5,8,1,Responding,10.43333333,0,,,TRUE,TRUE,FALSE,A*32:01;A*26:01,FALSE,B*38:01;B*35:01,FALSE,C*12:03;C*04:01,DPA1*01:03:01,TRUE,DPB1*02:01,TRUE,DQA1*01:03:01;DQA1*01:04:01,FALSE,DQB1*06:03;DQB1*05:03,FALSE,DRB1*13:01;DRB1*14:01,FALSE,2,Strong,78,0,1,Former,Anti-PD1 (pembrolizumab),,
RI1933,NSCLC,Rizvi,5,43,152,8,130,1416,43,0,0,0,250,250,0,40,53,11,Responding,16.6,0,,,TRUE,TRUE,FALSE,A*26:01;A*31:01,FALSE,B*57:01;B*13:02,TRUE,C*06:02,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*02:01;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*02:02,FALSE,DRB1*07:01;DRB1*04:02,FALSE,2,Strong,60,0,1,Former,Anti-PD1 (pembrolizumab),,
RO3338,NSCLC,Rizvi,1,4,19,2,18,224,4,0,0,0,34,33,1,3,5,1,Non-Responding,2.133333333,1,,,TRUE,TRUE,FALSE,A*02:01;A*30:02,FALSE,B*08:01;B*38:01,FALSE,C*07:01;C*12:03,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*05:01:01;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*02:01,FALSE,DRB1*04:02;DRB1*03:01,FALSE,1,Weak,71,0,1,Former,Anti-PD1 (pembrolizumab),,
SA9755,NSCLC,Rizvi,1,23,235,1,68,1636,23,0,0,0,629,614,14,75,103,8,Responding,8.366666667,0,,,TRUE,FALSE,FALSE,A*11:01;A*01:01,FALSE,B*08:01;B*35:01,FALSE,C*07:01;C*04:01,DPA1*01:03:01,TRUE,DPB1*16:01;DPB1*04:02,FALSE,DQA1*05:01:01;DQA1*01:04:01,FALSE,DQB1*05:03,TRUE,DRB1*14:54;DRB1*03:01,FALSE,1,Weak,63,1,1,Former,Anti-PD1 (pembrolizumab),,
SB010944,NSCLC,Rizvi,0,2,13,0,17,114,,2,,,36,,,7,13,2,Responding,27.3,0,,,FALSE,FALSE,FALSE,A*03:01;A*01:01,FALSE,B*08:01;B*07:02,FALSE,C*07:01;C*07:02,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*04:01,FALSE,DQA1*03:03:01,TRUE,DQB1*03:01,TRUE,DRB1*04:07;DRB1*04:01,FALSE,,Unknown,68,0,0,Never,Anti-PD1 (pembrolizumab),,
SC0899,NSCLC,Rizvi,3,26,124,10,144,1311,26,0,0,0,203,198,5,37,72,10,Responding,12.56666667,0,,,TRUE,TRUE,FALSE,A*24:02;A*26:01,FALSE,B*38:01;B*35:02,FALSE,C*12:03;C*04:01,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*464:01,FALSE,DQA1*05:05:01;DQA1*03:01:01,FALSE,DQB1*03:01;DQB1*03:02,FALSE,DRB1*11:04;DRB1*04:02,FALSE,1,Weak,64,0,2,Current,Anti-PD1 (pembrolizumab),,
SC6470,NSCLC,Rizvi,3,55,233,3,141,2134,,55,,,435,,,44,72,10,Responding,8.333333333,1,,,TRUE,TRUE,FALSE,A*26:01;A*02:01,FALSE,B*44:02;B*35:01,FALSE,C*04:01;C*05:01,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:01,FALSE,DQA1*02:01;DQA1*03:01:01,FALSE,DQB1*03:02;DQB1*02:02,FALSE,DRB1*07:01;DRB1*04:02,FALSE,1,Weak,59,0,2,Current,Anti-PD1 (pembrolizumab),,
SR070761,NSCLC,Rizvi,1,2,14,10,31,153,1,1,0.5,0,32,28,4,4,9,1,Non-Responding,3.433333333,1,,,TRUE,TRUE,FALSE,A*68:01;A*01:01,FALSE,B*56:01;B*35:02,FALSE,C*01:02;C*04:01,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*02:01,FALSE,DQA1*01:01:01;DQA1*01:03:01,FALSE,DQB1*06:03;DQB1*05:01,FALSE,DRB1*01:01;DRB1*11:04,FALSE,0,Negative,51,0,1,Former,Anti-PD1 (pembrolizumab),,
TU0428,NSCLC,Rizvi,3,19,80,9,79,1040,18,1,0.052631579,0,173,170,2,25,32,5,Non-Responding,2.066666667,1,,,TRUE,TRUE,FALSE,A*03:01;A*01:01,FALSE,B*35:01;B*07:02,FALSE,C*04:01;C*07:02,DPA1*01:03:01,TRUE,DPB1*04:01,TRUE,DQA1*01:01:01;DQA1*01:02:01,FALSE,DQB1*06:02;DQB1*05:01,FALSE,DRB1*15:01;DRB1*01:01,FALSE,0,Negative,66,0,2,Current,Anti-PD1 (pembrolizumab),,
VA1330,NSCLC,Rizvi,0,0,0,0,0,0,,0,,,0,,,0,0,,Non-Responding,4.133333333,1,,,TRUE,TRUE,FALSE,A*03:01;A*26:01,FALSE,B*44:03;B*35:02,TRUE,C*04:01,DPA1*01:03:01,TRUE,DPB1*02:01;DPB1*04:02,FALSE,DQA1*05:05:01;DQA1*02:01,FALSE,DQB1*03:01;DQB1*02:02,FALSE,DRB1*11:04;DRB1*07:01,FALSE,,Unknown,71,0,1,Former,Anti-PD1 (pembrolizumab),,
VA7859,NSCLC,Rizvi,0,0,0,0,0,0,,0,,,0,,,0,0,,Non-Responding,6.266666667,1,,,TRUE,TRUE,FALSE,A*29:02;A*23:01,FALSE,B*44:03;B*49:01,FALSE,C*07:01;C*16:01,DPA1*02:01:01,TRUE,DPB1*10:01;DPB1*11:01,FALSE,DQA1*05:05:01;DQA1*02:01,FALSE,DQB1*03:01;DQB1*02:02,FALSE,DRB1*07:01;DRB1*11:01,FALSE,,Unknown,57,0,1,Former,Anti-PD1 (pembrolizumab),,
WA7899,NSCLC,Rizvi,0,2,17,0,4,142,2,0,0,0,35,27,8,4,4,1,Non-Responding,1.9,1,,,TRUE,TRUE,FALSE,A*24:11N;A*03:01,FALSE,B*35:01;B*35:02,TRUE,C*04:01,DPA1*01:03:01,TRUE,DPB1*03:01;DPB1*04:01,FALSE,DQA1*01:01:01;DQA1*05:01:01,FALSE,DQB1*05:01;DQB1*02:01,FALSE,DRB1*01:01;DRB1*03:01,FALSE,2,Strong,49,2,0,Never,Anti-PD1 (pembrolizumab),,
Y2087,NSCLC,Rizvi,0,2,22,0,2,143,2,0,0,0,43,38,4,6,8,0,Responding,8.333333333,1,,,TRUE,TRUE,FALSE,A*11:01;A*31:01,FALSE,B*13:02;B*35:01,FALSE,C*06:02;C*04:01,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*02:01;DPB1*17:01,FALSE,DQA1*02:01;DQA1*03:03:01,FALSE,DQB1*02:02;DQB1*04:01,FALSE,DRB1*04:05;DRB1*07:01,FALSE,1,Weak,68,0,0,Never,Anti-PD1 (pembrolizumab),,
ZA6505,NSCLC,Rizvi,0,4,12,0,13,175,4,0,0,0,28,28,0,9,14,2,Non-Responding,1.933333333,1,,,TRUE,FALSE,FALSE,A*29:01;A*25:01,FALSE,B*07:05;B*18:01,FALSE,C*12:03;C*15:05,DPA1*02:01:01,TRUE,DPB1*17:01;DPB1*04:01,FALSE,DQA1*02:01;DQA1*01:03:01,FALSE,DQB1*06:03,TRUE,DRB1*11:04,TRUE,0,Negative,76,0,0,Never,Anti-PD1 (pembrolizumab),,
ZA6965,NSCLC,Rizvi,0,0,4,0,0,28,,0,,,7,,,0,0,,,4.433333333,0,,,TRUE,FALSE,FALSE,A*32:01;A*02:01,FALSE,B*45:01;B*40:01,FALSE,C*06:02;C*03:04,DPA1*01:03:01;DPA1*02:01:01,FALSE,DPB1*02:01;DPB1*14:01,FALSE,DQA1*03:03:01;DQA1*03:01:01,FALSE,DQB1*03:02,TRUE,DRB1*04:05;DRB1*04:04,FALSE,2,Strong,57,0,1,Former,Anti-PD1 (pembrolizumab),,
,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Notes: Responder=DCB: PR,CR and SD>6Months",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Sample clonality was not evaluate when sample purity is <20%,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,