Supplemental Table 2 Expression of Transcription Factors under drought stress #ID gene_name CK-1_FPKM CK-1_count CK-2_FPKM CK-2_count CK-3_FPKM CK-3_count P1-1_FPKM P1-1_count P1-2_FPKM P1-2_count P1-3_FPKM P1-3_count P2-1_FPKM P2-1_count P2-2_FPKM P2-2_count P2-3_FPKM P2-3_count P3-1_FPKM P3-1_count P3-2_FPKM P3-2_count P3-3_FPKM P3-3_count P4-1_FPKM P4-1_count P4-2_FPKM P4-2_count P4-3_FPKM P4-3_count CK-1_CK-2_CK-3_vs_P1-1_P1-2_P1-3_DESeq2_Pvalue CK-1_CK-2_CK-3_vs_P1-1_P1-2_P1-3_DESeq2_log2FC CK-1_CK-2_CK-3_vs_P1-1_P1-2_P1-3_DESeq2_(Pvalue_0.01_FC_1.5)_regulated CK-1_CK-2_CK-3_vs_P2-1_P2-2_P2-3_DESeq2_Pvalue CK-1_CK-2_CK-3_vs_P2-1_P2-2_P2-3_DESeq2_log2FC CK-1_CK-2_CK-3_vs_P2-1_P2-2_P2-3_DESeq2_(Pvalue_0.01_FC_1.5)_regulated CK-1_CK-2_CK-3_vs_P3-1_P3-2_P3-3_DESeq2_Pvalue CK-1_CK-2_CK-3_vs_P3-1_P3-2_P3-3_DESeq2_log2FC CK-1_CK-2_CK-3_vs_P3-1_P3-2_P3-3_DESeq2_(Pvalue_0.01_FC_1.5)_regulated CK-1_CK-2_CK-3_vs_P4-1_P4-2_P4-3_DESeq2_Pvalue CK-1_CK-2_CK-3_vs_P4-1_P4-2_P4-3_DESeq2_log2FC CK-1_CK-2_CK-3_vs_P4-1_P4-2_P4-3_DESeq2_(Pvalue_0.01_FC_1.5)_regulated P1-1_P1-2_P1-3_vs_P2-1_P2-2_P2-3_DESeq2_Pvalue P1-1_P1-2_P1-3_vs_P2-1_P2-2_P2-3_DESeq2_log2FC P1-1_P1-2_P1-3_vs_P2-1_P2-2_P2-3_DESeq2_(Pvalue_0.01_FC_1.5)_regulated P1-1_P1-2_P1-3_vs_P3-1_P3-2_P3-3_DESeq2_Pvalue P1-1_P1-2_P1-3_vs_P3-1_P3-2_P3-3_DESeq2_log2FC P1-1_P1-2_P1-3_vs_P3-1_P3-2_P3-3_DESeq2_(Pvalue_0.01_FC_1.5)_regulated P1-1_P1-2_P1-3_vs_P4-1_P4-2_P4-3_DESeq2_Pvalue P1-1_P1-2_P1-3_vs_P4-1_P4-2_P4-3_DESeq2_log2FC P1-1_P1-2_P1-3_vs_P4-1_P4-2_P4-3_DESeq2_(Pvalue_0.01_FC_1.5)_regulated P2-1_P2-2_P2-3_vs_P3-1_P3-2_P3-3_DESeq2_Pvalue P2-1_P2-2_P2-3_vs_P3-1_P3-2_P3-3_DESeq2_log2FC P2-1_P2-2_P2-3_vs_P3-1_P3-2_P3-3_DESeq2_(Pvalue_0.01_FC_1.5)_regulated P2-1_P2-2_P2-3_vs_P4-1_P4-2_P4-3_DESeq2_Pvalue P2-1_P2-2_P2-3_vs_P4-1_P4-2_P4-3_DESeq2_log2FC P2-1_P2-2_P2-3_vs_P4-1_P4-2_P4-3_DESeq2_(Pvalue_0.01_FC_1.5)_regulated P3-1_P3-2_P3-3_vs_P4-1_P4-2_P4-3_DESeq2_Pvalue P3-1_P3-2_P3-3_vs_P4-1_P4-2_P4-3_DESeq2_log2FC P3-1_P3-2_P3-3_vs_P4-1_P4-2_P4-3_DESeq2_(Pvalue_0.01_FC_1.5)_regulated COG_class COG_class_annotation GO_annotation KEGG_annotation KEGG_pathway_annotation KOG_class KOG_class_annotation Pfam_annotation Swiss_Prot_annotation eggNOG_class eggNOG_class_annotation NR_annotation GO_second_level_annotation Zm00014a022627 Zm00014a022627 0.132315 13 0.181284 18 0.195984 19 0.559707 45 0.937993 79 0.391556 29 0.43505 39 0.791741 80 0.495084 39 0.883619 85 0.474468 37 0.504311 46 0.650321 49 0.520448 41 0.482445 38 0.001109869 0.923713509 up 0.001193609 1.285037821 up 0.001187533 1.449635711 up 0.000458106 1.356774266 up 0.699346761 -0.143917063 normal 0.777265055 -0.120703878 normal 0.557307678 -0.22845009 normal 0.913361318 0.03488475 normal 0.864126047 -0.055690592 normal 0.744982265 -0.079619671 normal -- -- Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; -- -- -- -- B3 DNA binding domain B3 domain-containing protein Os06g0194400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0194400 PE=2 SV=1 K Transcription B3 domain-containing protein [Zea mays] molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464) Zm00014a028890 Zm00014a028890 31.997787 1860 36.97982 2247 36.975601 2174 75.937004 3749 59.089214 3074 50.72414 2314 130.787384 7178 160.177597 9972 63.29385 3079 116.645386 6859 179.166489 8426 182.363373 10259 124.388802 5774 123.806458 5911 161.633408 7758 0.000182069 0.662513431 up 5.89E-06 1.424943344 up 4.93E-20 1.890102959 up 3.70E-22 1.730708098 up 0.02272106 0.714814543 normal 2.28E-06 1.171444773 up 2.14E-05 0.993488689 up 0.335358658 0.276209317 normal 0.607040326 0.155193923 normal 0.459802149 -0.145883029 normal -- -- "Molecular Function: RNA polymerase II core promoter proximal region sequence-specific DNA binding (GO:0000978);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: cellular response to heat (GO:0034605);; Cellular Component: host cell nucleus (GO:0042025);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of transcription from RNA polymerase II promoter in response to stress (GO:0043618);; Biological Process: positive regulation of transcription from RNA polymerase II promoter in response to heat stress (GO:0061408);; " "K09419|9.5e-147|zma:101202695|K09419 heat shock transcription factor, other eukaryote | (RefSeq) heat shock factor protein 3 " -- [K] Transcription HSF-type DNA-binding Heat stress transcription factor C-2b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFC2B PE=3 SV=1 K Transcription heat shock factor protein 3 [Zea mays] molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: other organism (GO:0044215);; cellular component: other organism part (GO:0044217) Zm00014a017550 Zm00014a017550 0.378951 24 1.080514 71 0.680843 43 3.984558 211 2.388201 133 2.427348 119 2.380785 140 4.663803 311 7.842073 408 5.459837 344 6.165784 311 7.360291 443 5.781437 288 2.767673 142 1.236386 64 3.07E-05 1.158853553 up 2.40E-06 2.012704272 up 1.41E-14 2.715734195 up 0.001978142 1.619883089 up 0.165916241 0.500369303 normal 0.00144848 0.907202044 up 0.943462515 0.031019205 normal 0.50562867 0.205125343 normal 0.327735481 -0.371946198 normal 0.065613015 -0.457516387 normal -- -- Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Cellular Component: host cell nucleus (GO:0042025);; Molecular Function: metal ion binding (GO:0046872);; K20641|7.4e-12|cvr:CHLNCDRAFT_59250|K20641 Rho GTPase-activating protein 20 | (RefSeq) hypothetical protein -- -- -- SBP domain Squamosa promoter-binding-like protein 17 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL17 PE=2 SV=2 S Function unknown squamosa promoter-binding-like protein 17 [Zea mays] molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: other organism (GO:0044215);; cellular component: other organism part (GO:0044217) Zm00014a006206 Zm00014a006206 3.204751 271 3.345504 296 2.155818 185 7.183418 516 8.642168 654 3.791036 252 7.80266 623 26.935284 2438 3.086351 219 21.246363 1816 22.460352 1536 16.388674 1341 24.124163 1628 34.98048 2428 32.033043 2235 0.004046172 0.753541958 up 0.004792649 1.328116864 up 6.71E-22 2.446385128 up 4.27E-29 3.04500584 up 0.220798793 0.49792574 normal 5.35E-06 1.374734121 up 9.40E-10 1.909492229 up 0.349296902 0.319325953 normal 0.063232612 0.712441547 normal 0.004211611 0.532437673 normal -- -- Molecular Function: protein dimerization activity (GO:0046983);; K20558|3.4e-21|mtr:MTR_3g090850|K20558 transcription factor SPEECHLESS | (RefSeq) transcription factor MAPK signaling pathway - plant (ko04016) -- -- Helix-loop-helix DNA-binding domain Transcription factor bHLH94 OS=Arabidopsis thaliana OX=3702 GN=BHLH94 PE=1 SV=2 K Transcription transcription factor bHLH96 [Zea mays] molecular function: binding (GO:0005488) Zm00014a037517 Zm00014a037517 3.788004 183 5.830181 295 6.098975 298 11.981722 492 14.774148 639 8.159703 310 12.465881 569 29.870625 1545 20.038816 810 23.630268 1155 38.817822 1517 21.890718 1023 39.061073 1507 24.295036 964 17.598717 702 0.000378378 0.845015702 up 3.57E-07 1.632198644 up 1.22E-13 2.104584316 up 1.42E-10 2.043552422 up 0.051518129 0.620880639 normal 0.000494619 1.058955541 up 0.002296167 0.988879126 up 0.330136378 0.28287527 normal 0.393194674 0.275805576 normal 0.925923496 -0.021904442 normal -- -- "Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Molecular Function: sequence-specific DNA binding (GO:0043565);; " "K09422|8.4e-113|zma:103631701|K09422 transcription factor MYB, plant | (RefSeq) transcription factor MYB2 " -- [K] Transcription Myb-like DNA-binding domain Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2 K Transcription transcription factor MYB2 [Zea mays] cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488) Zm00014a002630 Zm00014a002630 0.21776 29 0.195635 27 0.095843 13 0.604365 68 0.590355 70 0.377549 40 1.0674 133 1.018754 144 0.524147 58 1.061325 142 1.611106 172 1.662182 213 0.941144 100 1.214272 132 1.157943 127 0.003221186 0.831766096 up 4.57E-05 1.704110627 up 7.00E-11 2.593573922 up 6.03E-09 2.262684078 up 0.139675772 0.509079254 normal 0.000184857 1.207525314 up 0.00309336 0.886802593 up 0.098739433 0.489318776 normal 0.39744944 0.261326468 normal 0.247818645 -0.252305044 normal -- -- -- K01051|1.2e-13|var:108341535|K01051 pectinesterase [EC:3.1.1.11] | (RefSeq) probable pectinesterase/pectinesterase inhibitor 58 Pentose and glucuronate interconversions (ko00040) [K] Transcription Myb/SANT-like DNA-binding domain Trihelix transcription factor GT-2 OS=Arabidopsis thaliana OX=3702 GN=GT-2 PE=1 SV=1 K Transcription Trihelix transcription factor GT-2 [Zea mays] -- Zm00014a015163 Zm00014a015163 6.908451 297 9.97356 448 5.832146 254 24.653337 900 11.732364 452 13.564753 458 27.534967 1117 42.058598 1935 23.262041 837 39.757469 1728 34.581821 1202 45.982628 1912 34.605343 1188 24.534494 866 31.540543 1119 0.004450953 0.739886719 up 4.60E-08 1.678165619 up 1.30E-16 2.08022513 up 9.63E-10 1.71166753 up 0.032230476 0.676739227 normal 0.000449844 1.046025162 up 0.031706283 0.679749054 normal 0.269379621 0.258706568 normal 0.856782877 -0.046368779 normal 0.068157867 -0.314493505 normal -- -- Molecular Function: metal ion binding (GO:0046872);; K23047|1.0e-61|cmos:111437026|K23047 E3 ubiquitin-protein ligase UNKL [EC:2.3.2.27] | (RefSeq) zinc finger CCCH domain-containing protein 2-like -- [R] General function prediction only -- Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0192000 PE=2 SV=1 S Function unknown nucleic acid binding protein [Zea mays] molecular function: binding (GO:0005488) Zm00014a002204 Zm00014a002204 22.022074 982 15.036729 701 11.606476 524 9.626578 365 8.910995 356 8.354491 293 7.442024 314 5.569095 266 4.797435 179 8.084872 365 6.968002 252 7.616803 329 5.794229 207 6.202548 228 6.607905 244 0.00239076 -0.723802545 down 9.33E-06 -1.428515607 down 5.07E-06 -1.318355865 down 7.50E-07 -1.513151747 down 0.0141788 -0.592025503 normal 0.03132483 -0.374012102 normal 0.001104519 -0.600881532 down 0.296226351 0.236100004 normal 0.875871174 0.037576375 normal 0.169998214 -0.21427243 normal -- -- "Molecular Function: double-stranded DNA binding (GO:0003690);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Cellular Component: chloroplast (GO:0009507);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: developmental process (GO:0032502);; " "K15032|2.3e-202|zma:100191160|K15032 mTERF domain-containing protein, mitochondrial | (RefSeq) uncharacterized protein LOC100191160 " -- [KR] Transcription;; General function prediction only mTERF -- K Transcription "mTERF transcription factor, partial [Zea mays]" molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502) Zm00014a003673 Zm00014a003673 48.819214 1176 48.612686 1224 54.544563 1329 34.558239 707 24.676371 532 26.485802 501 20.894854 476 6.732807 174 17.648563 356 11.102299 271 4.525776 89 13.417958 313 7.453004 144 6.525799 130 5.7172 114 2.00E-06 -0.804183073 down 7.40E-06 -1.607431629 down 5.22E-14 -2.497391572 down 1.31E-92 -3.098420855 down 0.03034154 -0.750698991 normal 1.53E-05 -1.529390749 down 1.71E-19 -2.097053197 down 0.179811454 -0.44581728 normal 0.008442111 -0.899944136 down 0.216748619 -0.302181415 normal -- -- "Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; " K09286|6.6e-71|zma:100274398|K09286 EREBP-like factor | (RefSeq) AP2-EREBP transcription factor -- -- -- AP2 domain Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana OX=3702 GN=ERF1A PE=1 SV=2 K Transcription Ethylene-responsive transcription factor 1 [Zea mays] molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464) Zm00014a023027 Zm00014a023027 27.675819 827 41.35006 1291 19.197884 580 18.124739 460 18.788151 503 13.601678 319 12.708201 359 4.650963 149 4.943176 124 10.595576 321 5.587501 136 11.051399 320 6.413837 154 10.583849 260 17.100559 422 0.00956011 -0.648742667 down 3.21E-05 -1.695716341 down 1.54E-07 -1.84359278 down 0.000657759 -1.409215339 down 0.009358451 -0.922765062 down 0.001060033 -0.958342459 down 0.113582536 -0.559417429 normal 0.688176211 0.130889286 normal 0.294947015 0.385554455 normal 0.388329235 0.212715267 normal -- -- "Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; " K14516|6.0e-98|zma:100191919|K14516 ethylene-responsive transcription factor 1 | (RefSeq) putative AP2/EREBP transcription factor superfamily protein MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075) -- -- AP2 domain Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=ERF1B PE=1 SV=2 K Transcription Ethylene-responsive transcription factor 1B [Zea mays] molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464) Zm00014a019289 Zm00014a019289 8.384436 177 10.806643 238 2.753151 59 2.636014 48 2.106563 40 2.47269 41 0.83368 17 0.265852 7 1.788896 32 0.156055 4 0.099317 2 0.031381 1 0.129146 3 0.057775 1 0 0 0.002719856 -0.849708324 down 7.03E-05 -1.932427571 down 6.41E-17 -4.867292645 down 9.47E-15 -4.617410989 down 0.056596827 -0.775285161 normal 1.02E-10 -3.251840057 down 2.38E-10 -3.070614664 down -- -- -- -- -- -- -- -- -- -- -- "Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; " K09286|1.8e-19|thj:104819854|K09286 EREBP-like factor | (RefSeq) ethylene-responsive transcription factor RAP2-10-like -- -- -- AP2 domain Ethylene-responsive transcription factor ERF020 OS=Arabidopsis thaliana OX=3702 GN=ERF020 PE=2 SV=1 K Transcription Ethylene-responsive transcription factor ERF020 [Zea mays] molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464) Zm00014a006073 Zm00014a006073 5.335997 198 2.725367 106 1.825644 69 1.39499 44 0.964477 32 1.156127 34 0.933065 33 0.292662 12 0.698075 22 1.000512 38 0.813275 25 1.093927 40 0.399705 12 0.375915 12 1.700861 53 0.00278931 -0.845035706 down 0.000101383 -1.781871248 down 7.27E-05 -1.811203727 down 0.004171703 -1.658469661 down 0.132272367 -0.590988448 normal 0.364681446 -0.342964364 normal 0.463478951 -0.361484042 normal -- -- -- -- -- -- 0.824023759 -0.051220028 normal -- -- "Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; " K12900|5.3e-27|lang:109341833|K12900 FUS-interacting serine-arginine-rich protein 1 | (RefSeq) serine/arginine-rich SC35-like splicing factor SCL30A Spliceosome (ko03040) -- -- AP2 domain Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2 K Transcription Ethylene-responsive transcription factor RAP2-6 [Zea mays] molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464) Zm00014a002464 Zm00014a002464 11.428055 513 9.969125 468 7.950423 361 5.567024 213 3.501675 141 5.968094 211 3.712248 158 1.944276 94 3.845773 145 3.447823 157 2.709139 99 3.630812 158 2.493499 90 3.710576 137 2.170635 81 0.000761867 -0.802334885 down 1.23E-06 -1.574520949 down 3.22E-12 -1.785781885 down 1.40E-10 -1.913998908 down 0.074293237 -0.581052852 normal 0.015028277 -0.706597971 normal 0.009053401 -0.839914208 down 0.92740792 -0.026059253 normal 0.619131376 -0.160447937 normal 0.542390862 -0.135241414 normal -- -- Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; "K09422|2.2e-145|zma:100193234|K09422 transcription factor MYB, plant | (RefSeq) uncharacterized protein LOC100193234 " -- [K] Transcription Myb-like DNA-binding domain Myb-related protein 308 OS=Antirrhinum majus OX=4151 GN=MYB308 PE=2 SV=1 K Transcription Myb-related protein 308 [Zea mays] molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464) Zm00014a010916 Zm00014a010916 67.022797 2524 38.843231 1530 28.828932 1099 21.98645 704 14.965278 505 24.942268 738 6.894885 246 2.601026 105 5.504682 174 1.80114 69 0.5672 18 0.776274 29 8.812024 266 1.066378 33 0.690412 22 0.001404893 -0.836854142 down 6.07E-12 -2.706885052 down 1.32E-34 -5.165119058 down 0.000597604 -2.287467472 down 8.32E-07 -1.652436788 down 1.61E-25 -3.897371565 down 0.001475205 -1.605419942 down 7.27E-05 -1.335145164 down 0.553075488 -0.226474304 normal 0.074689924 0.368060705 normal -- -- Molecular Function: DNA binding (GO:0003677);; "K09422|3.0e-122|zma:100285289|K09422 transcription factor MYB, plant | (RefSeq) anthocyanin regulatory C1 protein " -- [K] Transcription Myb-like DNA-binding domain Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3 -- -- Myb-related protein Hv33 [Zea mays] molecular function: binding (GO:0005488) Zm00014a021717 Zm00014a021717 39.099804 2358 35.190964 2219 27.31674 1667 24.867723 1274 15.519461 838 21.546761 1020 8.609599 491 4.573308 296 7.609367 385 4.78745 293 4.342661 212 3.77946 221 7.201986 347 2.257755 112 5.235019 261 0.002827637 -0.651103409 down 9.66E-14 -2.211571701 down 4.07E-44 -3.160082965 down 1.90E-12 -2.731682893 down 1.17E-06 -1.398229662 down 6.53E-22 -2.294590833 down 8.25E-07 -1.838535767 down 0.01542124 -0.630413254 normal 0.277469543 -0.378726233 normal 0.594997653 0.130471715 normal -- -- Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; "K09422|4.1e-174|zma:541969|K09422 transcription factor MYB, plant | (RefSeq) MYB-IF35; R2R3 Myb transcription factor MYB-IF35 " -- [K] Transcription Myb-like DNA-binding domain Myb-related protein P OS=Zea mays OX=4577 GN=P PE=2 SV=1 -- -- R2R3 Myb transcription factor MYB-IF35 [Zea mays] molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464) Zm00014a024316 Zm00014a024316 77.14782 4459 51.448929 3109 27.116442 1586 31.352634 1540 25.200201 1304 18.794203 853 15.101264 825 6.794144 421 19.365116 937 12.058908 706 10.099012 473 12.410126 695 14.4696 669 9.67404 460 16.329538 780 0.005473746 -0.747896995 down 4.60E-05 -1.664771042 down 6.46E-11 -2.306359967 down 7.43E-07 -1.963765853 down 0.028305104 -0.735944352 normal 1.95E-07 -1.210336936 down 0.001706907 -0.903967627 down 0.393269644 -0.25049634 normal 0.914536474 -0.035511081 normal 0.279145767 0.217005777 normal -- -- "Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; " "K00521|1.4e-40|cmos:111447866|K00521 ferric-chelate reductase [EC:1.16.1.7] | (RefSeq) ferric reduction oxidase 7, chloroplastic-like " -- -- -- No apical meristem (NAM) protein NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC068 PE=2 SV=1 K Transcription NAC domain-containing protein 68 [Zea mays] molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007) Zm00014a010291 Zm00014a010291 29.222214 2557 26.126907 2391 14.183146 1256 14.686913 1092 9.100949 713 9.708399 667 12.618814 1043 6.694683 628 6.2742 460 5.876126 521 4.224392 300 9.149487 776 5.823516 408 6.481627 467 6.683877 484 0.001271249 -0.820806242 down 0.000186099 -1.359467286 down 1.33E-08 -2.001135744 down 5.71E-10 -1.96798426 down 0.248354652 -0.363860374 normal 0.006055474 -0.866174648 down 0.000691073 -0.855043417 down 0.223050079 -0.365555301 normal 0.188406795 -0.379784396 normal 0.932270149 0.018824486 normal -- -- "Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; " "K00521|8.8e-20|cmos:111447866|K00521 ferric-chelate reductase [EC:1.16.1.7] | (RefSeq) ferric reduction oxidase 7, chloroplastic-like " -- -- -- No apical meristem (NAM) protein NAC domain-containing protein 83 OS=Arabidopsis thaliana OX=3702 GN=NAC083 PE=1 SV=1 K Transcription NAC domain-containing protein 83 [Zea mays] molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007) Zm00014a026170 Zm00014a026170 44.612118 2033 60.673992 2891 42.574074 1963 33.142262 1283 16.761515 684 30.818542 1103 22.524235 970 10.82019 529 18.176926 694 9.127322 421 2.837051 105 7.856248 347 5.587546 204 5.987289 225 3.526509 133 0.002180503 -0.730299696 down 1.02E-06 -1.498436614 down 4.50E-16 -2.956240474 down 1.49E-36 -3.35736712 down 0.074364996 -0.572106954 normal 1.04E-06 -1.898046105 down 1.39E-12 -2.25310927 down 0.00205772 -0.985714033 down 1.40E-06 -1.459226756 down 0.439181484 -0.191304145 normal -- -- "Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; " "K00521|2.8e-10|cmos:111447866|K00521 ferric-chelate reductase [EC:1.16.1.7] | (RefSeq) ferric reduction oxidase 7, chloroplastic-like " -- -- -- No apical meristem (NAM) protein NAC domain-containing protein 83 OS=Arabidopsis thaliana OX=3702 GN=NAC083 PE=1 SV=1 K Transcription NAC domain-containing protein 2 [Zea mays] molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007) Zm00014a039108 Zm00014a039108 15.737855 841 14.669028 819 11.463117 620 7.321765 333 3.72867 179 5.872554 247 2.895006 146 0.55715 32 2.307399 104 0.671789 37 0.050905 3 0.247859 13 0.265531 12 0.713417 32 0.204214 10 1.09E-05 -1.057064485 down 8.28E-08 -2.297036718 down 3.04E-26 -4.977562446 down 2.32E-34 -4.797006772 down 0.009343466 -1.025220268 down 3.80E-11 -3.233033961 down 1.37E-13 -3.07268883 down 0.005661615 -0.917302994 down 0.004801976 -1.09242619 down -- -- -- -- -- "Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; " "K00521|4.7e-30|cmos:111447866|K00521 ferric-chelate reductase [EC:1.16.1.7] | (RefSeq) ferric reduction oxidase 7, chloroplastic-like " -- -- -- No apical meristem (NAM) protein NAC domain-containing protein 90 OS=Arabidopsis thaliana OX=3702 GN=NAC090 PE=1 SV=1 K Transcription NAC domain-containing protein 90 [Zea mays] molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007) Zm00014a020501 Zm00014a020501 19.355879 1289 13.8249 963 8.681461 585 6.080456 344 4.67656 279 5.264461 276 3.643283 230 1.448841 104 2.29014 128 1.770559 120 0.845932 46 1.876097 121 1.542926 83 1.938289 107 0.998622 55 2.63E-05 -1.065239065 down 1.56E-08 -2.187553232 down 7.59E-18 -3.249144451 down 6.07E-17 -3.15271357 down 0.003947829 -0.940073207 down 1.06E-08 -1.811874525 down 1.02E-09 -1.765630544 down 0.10493199 -0.525682043 normal 0.119274108 -0.540129537 normal 0.930846481 0.021371503 normal -- -- "Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Molecular Function: sequence-specific DNA binding (GO:0043565);; " K13425|3.4e-78|obr:102705049|K13425 WRKY transcription factor 22 | (RefSeq) probable WRKY transcription factor 27 MAPK signaling pathway - plant (ko04016);; Plant-pathogen interaction (ko04626) -- -- WRKY DNA -binding domain Probable WRKY transcription factor 27 OS=Arabidopsis thaliana OX=3702 GN=WRKY27 PE=2 SV=1 K Transcription WRKY transcription factor 22 [Zea mays] molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488) Zm00014a025988 Zm00014a025988 16.338408 1146 13.318205 977 5.142279 365 4.016884 240 4.212806 265 2.876151 159 3.335184 221 0.538055 41 0.756319 45 0.817985 59 0.345135 20 1.126342 77 0.685665 39 1.023633 59 0.988362 58 0.000124926 -1.059177918 down 4.59E-05 -1.967186171 down 5.57E-16 -3.736772073 down 1.14E-15 -3.458269093 down 0.065512682 -0.747770548 normal 3.66E-08 -2.108314333 down 2.93E-11 -1.938682826 down 0.169057202 -0.465135087 normal 0.285289201 -0.413789392 normal 0.59428029 0.132245386 normal -- -- "Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Molecular Function: sequence-specific DNA binding (GO:0043565);; " K13425|2.4e-74|bdi:100841136|K13425 WRKY transcription factor 22 | (RefSeq) WRKY transcription factor 22 MAPK signaling pathway - plant (ko04016);; Plant-pathogen interaction (ko04626) -- -- WRKY DNA -binding domain Probable WRKY transcription factor 27 OS=Arabidopsis thaliana OX=3702 GN=WRKY27 PE=2 SV=1 K Transcription putative WRKY transcription factor 27 [Zea mays] molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488) Zm00014a038700 Zm00014a038700 21.442808 1516 22.794378 1685 10.624912 760 12.192398 733 5.808588 368 9.659631 536 9.118131 609 4.356197 330 6.486611 384 4.456534 319 2.649773 152 4.594604 315 4.200893 238 3.573171 208 3.117135 182 0.00702918 -0.719132149 down 0.000171301 -1.373097423 down 7.59E-12 -2.360159774 down 2.13E-12 -2.383681519 down 0.19728832 -0.422861098 normal 0.000102348 -1.266426953 down 2.09E-05 -1.3051586 down 0.023074618 -0.654341262 normal 0.00977567 -0.749092157 down 0.820855484 -0.048245037 normal -- -- "Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Molecular Function: sequence-specific DNA binding (GO:0043565);; " K18834|1.1e-19|cqi:110701898|K18834 WRKY transcription factor 1 | (RefSeq) probable WRKY transcription factor 58 Plant-pathogen interaction (ko04626) -- -- WRKY DNA -binding domain Probable WRKY transcription factor 47 OS=Arabidopsis thaliana OX=3702 GN=WRKY47 PE=1 SV=2 K Transcription WRKY transcription factor 42 [Zea mays] molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488) Zm00014a028603 Zm00014a028603 17.111082 1120 18.393166 1259 7.81685 518 9.050014 504 4.662573 274 4.70421 242 6.009861 372 0.917274 65 2.150137 118 1.038922 69 0.349947 19 1.394852 89 0.523153 28 0.594451 32 0.612935 34 0.002185938 -0.836257889 down 0.000382724 -1.658926863 down 1.21E-17 -3.803045312 down 6.26E-31 -4.418915118 down 0.116799046 -0.632683381 normal 1.84E-08 -2.406647078 down 2.59E-18 -3.030725814 down 0.019636015 -0.794232901 normal 0.000735621 -1.300191007 down 0.274870568 -0.268669465 normal -- -- "Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Molecular Function: sequence-specific DNA binding (GO:0043565);; " K16225|1.4e-16|crb:17875137|K16225 probable WRKY transcription factor 52 | (RefSeq) disease resistance protein RRS1 Plant-pathogen interaction (ko04626) -- -- WRKY DNA -binding domain Probable WRKY transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=WRKY53 PE=1 SV=1 K Transcription putative WRKY transcription factor 53 [Zea mays] molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488) Zm00014a032260 Zm00014a032260 11.651036 561 16.848034 849 9.714457 474 8.135052 333 3.727315 161 5.599896 212 5.219755 238 1.943413 101 3.342317 135 3.991513 195 3.15381 123 4.695656 219 3.3095 128 1.454421 58 5.075343 202 0.001097438 -0.846348161 down 5.58E-06 -1.68701528 down 4.69E-11 -1.875679749 down 9.75E-06 -1.907457755 down 0.10913051 -0.579213323 normal 0.051942334 -0.641425538 normal 0.089155294 -0.719697911 normal 0.838938655 0.062627401 normal 0.844321787 -0.073235572 normal 0.657197557 -0.110183694 normal -- -- "Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Molecular Function: sequence-specific DNA binding (GO:0043565);; " K12835|1.1e-26|cmax:111493042|K12835 ATP-dependent RNA helicase DDX42 [EC:3.6.4.13] | (RefSeq) DEAD-box ATP-dependent RNA helicase 24 isoform X1 Spliceosome (ko03040) -- -- WRKY DNA -binding domain Probable WRKY transcription factor 75 OS=Arabidopsis thaliana OX=3702 GN=WRKY75 PE=1 SV=1 K Transcription putative WRKY transcription factor 75 [Zea mays] molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488) Zm00014a032339 Zm00014a032339 15.386128 653 12.719501 565 10.579378 455 9.170229 331 6.421647 244 6.608735 221 7.792669 313 2.124835 97 4.489638 160 4.346312 187 2.960176 102 4.829803 199 3.629914 124 2.178539 76 7.091208 249 0.00162069 -0.707682128 down 0.001507552 -1.268041533 down 1.18E-11 -1.864857873 down 0.000150837 -1.588921102 down 0.18423352 -0.488301878 normal 0.000660921 -0.948501564 down 0.075031215 -0.708297625 normal 0.513118989 -0.214204647 normal 0.775274667 -0.10827104 normal 0.763529639 0.074732505 normal -- -- "Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Molecular Function: sequence-specific DNA binding (GO:0043565);; " K12835|3.6e-27|cmax:111493042|K12835 ATP-dependent RNA helicase DDX42 [EC:3.6.4.13] | (RefSeq) DEAD-box ATP-dependent RNA helicase 24 isoform X1 Spliceosome (ko03040) -- -- WRKY DNA -binding domain Probable WRKY transcription factor 75 OS=Arabidopsis thaliana OX=3702 GN=WRKY75 PE=1 SV=1 K Transcription probable WRKY transcription factor 45 [Zea mays] molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488) Zm00014a014138 Zm00014a014138 88.495079 1578 56.615971 1056 35.733646 645 25.724468 390 24.561932 392 30.861118 432 11.176816 189 3.373337 65 16.436829 246 1.01011 19 0.736597 11 1.001723 18 2.91631 42 1.704722 25 0 0 0.000759139 -0.874107942 down 5.09E-06 -2.014730036 down 1.84E-49 -5.77466448 down 0.001820796 -2.125545022 down 0.007559677 -1.007797054 down 4.62E-61 -4.636985287 down 1.73E-05 -2.211788028 down 5.57E-08 -1.845702208 down 0.029274255 -0.782466773 normal -- -- -- -- -- Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; K12133|5.3e-17|peq:110025280|K12133 MYB-related transcription factor LHY | (RefSeq) protein CCA1-like Circadian rhythm - plant (ko04712) [O] "Posttranslational modification, protein turnover, chaperones" Myb-like DNA-binding domain Protein REVEILLE 8 OS=Arabidopsis thaliana OX=3702 GN=RVE8 PE=2 SV=1 K Transcription Myb-like protein G [Zea mays] molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464) Zm00014a028131 Zm00014a028131 25.767487 1505 14.106861 861 16.307653 963 8.80713 437 4.713651 247 7.453802 342 6.927819 382 2.367977 149 4.704792 230 5.274529 312 2.269685 108 1.949703 111 2.677664 125 3.2781 158 6.746059 326 1.74E-05 -1.087208008 down 2.85E-06 -1.786056462 down 1.85E-11 -2.617054782 down 1.62E-07 -2.11202007 down 0.174628071 -0.480659921 normal 0.003986393 -1.12083392 down 0.080810474 -0.672292828 normal 0.236014783 -0.393929251 normal 0.772645933 -0.105290298 normal 0.363523737 0.225525503 normal -- -- Molecular Function: molecular_function (GO:0003674);; Molecular Function: transcription cofactor activity (GO:0003712);; Molecular Function: transcription corepressor activity (GO:0003714);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to stress (GO:0006950);; Biological Process: biological_process (GO:0008150);; Biological Process: response to wounding (GO:0009611);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: negative regulation of biosynthetic process (GO:0009890);; Biological Process: negative regulation of metabolic process (GO:0009892);; Biological Process: regulation of signal transduction (GO:0009966);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: negative regulation of macromolecule biosynthetic process (GO:0010558);; Biological Process: negative regulation of macromolecule metabolic process (GO:0010605);; Biological Process: regulation of cell communication (GO:0010646);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: regulation of signaling (GO:0023051);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: negative regulation of cellular metabolic process (GO:0031324);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: negative regulation of cellular biosynthetic process (GO:0031327);; Biological Process: regulation of defense response (GO:0031347);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular part (GO:0044424);; Cellular Component: cell part (GO:0044464);; Biological Process: negative regulation of nucleobase-containing compound metabolic process (GO:0045934);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: negative regulation of nitrogen compound metabolic process (GO:0051172);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: negative regulation of RNA metabolic process (GO:0051253);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: regulation of response to stress (GO:0080134);; Biological Process: negative regulation of RNA biosynthetic process (GO:1902679);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: negative regulation of nucleic acid-templated transcription (GO:1903507);; Biological Process: regulation of jasmonic acid mediated signaling pathway (GO:2000022);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; K13464|5.1e-28|sita:101780819|K13464 jasmonate ZIM domain-containing protein | (RefSeq) protein TIFY 11d Plant hormone signal transduction (ko04075) -- -- Jas motif Protein TIFY 10b OS=Oryza sativa subsp. indica OX=39946 GN=TIFY10B PE=3 SV=1 K Transcription protein TIFY 10b [Zea mays] "molecular function: transcription factor activity, protein binding (GO:0000988);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896)" Zm00014a042860 Zm00014a042860 33.247627 1464 28.255766 1301 20.544739 915 19.547237 732 14.985147 591 17.526333 606 7.710283 321 4.34928 206 7.185472 265 3.35118 150 2.04259 73 1.391698 60 3.337206 118 1.919575 70 1.117886 41 0.005733846 -0.603933154 down 6.34E-11 -2.018130977 down 9.13E-27 -3.640486309 down 1.40E-20 -3.561759017 down 6.44E-07 -1.319207615 down 2.03E-19 -2.830391979 down 2.99E-15 -2.72619136 down 0.000233235 -1.130015256 down 0.000690995 -1.172333255 down 0.912324525 -0.027321953 normal -- -- Molecular Function: molecular_function (GO:0003674);; Molecular Function: transcription cofactor activity (GO:0003712);; Molecular Function: transcription corepressor activity (GO:0003714);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to stress (GO:0006950);; Biological Process: biological_process (GO:0008150);; Biological Process: response to wounding (GO:0009611);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: negative regulation of biosynthetic process (GO:0009890);; Biological Process: negative regulation of metabolic process (GO:0009892);; Biological Process: regulation of signal transduction (GO:0009966);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: negative regulation of macromolecule biosynthetic process (GO:0010558);; Biological Process: negative regulation of macromolecule metabolic process (GO:0010605);; Biological Process: regulation of cell communication (GO:0010646);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: regulation of signaling (GO:0023051);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: negative regulation of cellular metabolic process (GO:0031324);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: negative regulation of cellular biosynthetic process (GO:0031327);; Biological Process: regulation of defense response (GO:0031347);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular part (GO:0044424);; Cellular Component: cell part (GO:0044464);; Biological Process: negative regulation of nucleobase-containing compound metabolic process (GO:0045934);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: negative regulation of nitrogen compound metabolic process (GO:0051172);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: negative regulation of RNA metabolic process (GO:0051253);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: regulation of response to stress (GO:0080134);; Biological Process: negative regulation of RNA biosynthetic process (GO:1902679);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: negative regulation of nucleic acid-templated transcription (GO:1903507);; Biological Process: regulation of jasmonic acid mediated signaling pathway (GO:2000022);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; K13464|1.6e-73|zma:100274370|K13464 jasmonate ZIM domain-containing protein | (RefSeq) putative tify domain/CCT motif transcription factor family protein Plant hormone signal transduction (ko04075) -- -- tify domain Protein TIFY 9 OS=Oryza sativa subsp. indica OX=39946 GN=TIFY9 PE=3 SV=1 S Function unknown Protein TIFY 9 [Zea mays] "molecular function: transcription factor activity, protein binding (GO:0000988);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896)" Zm00014a031923 Zm00014a031923 93.525921 6802 55.47661 4217 52.405693 3866 36.782444 2291 26.144292 1709 46.414227 2670 18.916977 1301 16.849255 1306 16.680075 1016 15.702259 1150 9.658881 563 14.821826 1036 12.817368 740 12.66193 755 9.454107 566 0.003848129 -0.71390873 down 8.34E-12 -1.929710489 down 5.17E-17 -2.499323485 down 7.11E-19 -2.617144371 down 1.47E-05 -1.027712876 down 2.49E-08 -1.512934365 down 1.41E-10 -1.645118254 down 0.048153821 -0.419533294 normal 0.001262449 -0.580558359 normal 0.507499715 -0.128596955 normal -- -- Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; -- -- -- -- -- Protein ULTRAPETALA 1 OS=Arabidopsis thaliana OX=3702 GN=ULT1 PE=1 SV=1 S Function unknown ULT transcription factor [Zea mays] cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464) Zm00014a037238 Zm00014a037238 17.984144 1191 10.470309 725 8.067783 541 6.862166 386 2.599082 155 4.876995 254 3.111708 195 1.437452 102 2.768129 154 1.230902 83 0.832946 45 1.336616 86 0.986587 53 0.98766 54 0.866679 48 0.001385734 -0.881796136 down 4.96E-08 -2.065666793 down 2.36E-22 -3.466072282 down 1.45E-23 -3.59688454 down 0.033611055 -0.763626711 normal 1.75E-07 -1.956862271 down 1.48E-08 -2.069425761 down 0.005434473 -0.850345166 down 0.000828219 -1.072741477 down 0.522861443 -0.147344005 normal -- -- "Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: biological_process (GO:0008150);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Cellular Component: intracellular part (GO:0044424);; Cellular Component: cell part (GO:0044464);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of primary metabolic process (GO:0080090);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; " K14494|1.1e-48|aly:9318362|K14494 DELLA protein | (RefSeq) DELLA protein RGL2 Plant hormone signal transduction (ko04075) -- -- GRAS domain family SCARECROW-LIKE protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=SCL7 PE=1 SV=1 K Transcription Scarecrow-like protein 4 [Zea mays] molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226) Zm00014a032408 Zm00014a032408 72.984918 6103 56.915132 5086 41.466772 3534 35.068577 2486 28.824827 2225 34.372088 2264 16.387095 1309 4.216074 377 23.27813 1660 4.885152 415 3.471265 243 4.748875 388 6.494892 434 7.006025 484 1.352772 95 0.000906038 -0.72527338 down 0.000201123 -1.610276882 down 2.76E-47 -3.840974751 down 6.86E-12 -3.238049376 down 0.026533708 -0.841843969 normal 3.49E-60 -2.962658989 down 6.01E-08 -2.260185938 down 0.000870359 -1.108570492 down 0.027119699 -0.853877895 normal 0.714749889 0.090646649 normal -- -- Molecular Function: protein dimerization activity (GO:0046983);; K13422|2.2e-13|ppp:112288376|K13422 transcription factor MYC2 | (RefSeq) transcription factor MYC3-like isoform X1 MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075) -- -- Helix-loop-helix DNA-binding domain Transcription factor bHLH25 OS=Arabidopsis thaliana OX=3702 GN=BHLH25 PE=2 SV=2 K Transcription symbiotic ammonium transporter [Zea mays] molecular function: binding (GO:0005488) Zm00014a037255 Zm00014a037255 40.068329 3238 32.882282 2778 25.796858 2109 16.89628 1160 20.856529 1509 20.53619 1303 6.85046 523 2.196658 191 7.024981 476 1.163476 96 1.207652 79 0.605243 48 0.817066 53 1.124022 75 0.511817 35 0.000644203 -0.707465295 down 2.49E-09 -2.290053282 down 1.46E-62 -5.075282901 down 2.11E-60 -5.212808106 down 2.04E-05 -1.472821866 down 7.02E-55 -4.172350628 down 8.56E-60 -4.32166836 down 1.60E-06 -1.575997936 down 4.62E-07 -1.826194593 down 0.600042509 -0.129993816 normal -- -- Molecular Function: protein dimerization activity (GO:0046983);; K13422|1.9e-14|mus:103990620|K13422 transcription factor MYC2 | (RefSeq) transcription factor MYC2-like MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075) -- -- Helix-loop-helix DNA-binding domain Transcription factor bHLH25 OS=Arabidopsis thaliana OX=3702 GN=BHLH25 PE=2 SV=2 K Transcription Transcription factor bHLH25 [Zea mays] molecular function: binding (GO:0005488) Zm00014a006157 Zm00014a006157 21.679102 809 19.110044 746 11.129476 421 7.598605 241 3.477085 117 3.7486 110 0.969309 35 0.802081 33 1.68537 53 0.386536 15 0.310856 10 0 0 0.593875 18 0.162674 5 0.269129 9 7.46E-06 -1.214490592 down 8.48E-22 -3.450826223 down 2.26E-07 -3.703879259 down 8.96E-32 -5.125383236 down 1.64E-05 -1.56823766 down 2.33E-08 -3.018639689 down 5.43E-11 -2.914930238 down -- -- -- -- -- -- -- -- -- -- -- Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; K08869|1.0e-22|cre:CHLREDRAFT_165812|K08869 aarF domain-containing kinase | (RefSeq) predicted protein -- [O] "Posttranslational modification, protein turnover, chaperones" Myb-like DNA-binding domain Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1 K Transcription Transcription factor DIVARICATA [Zea mays] molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464) Zm00014a027913 Zm00014a027913 34.321507 1879 33.775902 1934 18.288023 1013 16.595865 772 7.30156 358 8.26813 356 10.359344 536 3.788512 223 5.976273 274 6.570361 365 5.895655 262 8.429138 447 3.403644 149 4.90127 221 10.96449 496 0.000218391 -0.993163345 down 9.96E-07 -1.869594309 down 1.60E-13 -2.21852435 down 2.39E-06 -2.083251008 down 0.143792278 -0.533465322 normal 0.038385317 -0.695474646 normal 0.128868067 -0.646752956 normal 0.944332907 -0.021069925 normal 0.887087807 -0.052516239 normal 0.893351553 -0.033192373 normal -- -- "Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Molecular Function: sequence-specific DNA binding (GO:0043565);; " "K09422|2.1e-141|zma:109939245|K09422 transcription factor MYB, plant | (RefSeq) uncharacterized protein LOC109939245 " -- [K] Transcription Myb-like DNA-binding domain Transcription factor JAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=JAMYB PE=2 SV=1 K Transcription uncharacterized protein LOC109939245 [Zea mays] cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488) Zm00014a012906 Zm00014a012906 41.984089 3920 42.441162 4143 27.204573 2570 25.575665 2029 19.878111 1662 20.220119 1482 18.047338 1592 11.049379 1106 24.599157 1923 15.677551 1482 10.472622 792 16.371315 1480 14.244453 1063 11.237521 863 7.110642 549 0.001225704 -0.697808724 down 0.00090164 -1.078589538 down 1.57E-09 -1.605557589 down 1.62E-09 -1.884347521 down 0.284580197 -0.305607659 normal 0.000976388 -0.737962686 down 0.000133245 -1.032188252 down 0.22427408 -0.331274071 normal 0.053041176 -0.598247155 normal 0.239194246 -0.256833702 normal -- -- Molecular Function: DNA binding (GO:0003677);; "K09422|6.6e-145|zma:100274036|K09422 transcription factor MYB, plant | (RefSeq) putative MYB DNA-binding domain superfamily protein " -- [K] Transcription Myb-like DNA-binding domain Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1 K Transcription Transcription factor MYB78 [Zea mays] molecular function: binding (GO:0005488) Zm00014a038001 Zm00014a038001 14.800428 675 13.246717 632 6.369928 294 6.281159 244 5.73823 235 6.15082 221 2.197458 95 0.415762 21 5.359787 205 1.187044 55 0.322226 12 0.443177 20 0.630968 23 0.223468 9 0.252388 10 0.006717778 -0.704479259 down 0.003215991 -1.438162806 down 3.75E-17 -3.910729455 down 4.62E-23 -4.476360488 down 0.095404892 -0.682328824 normal 1.13E-12 -2.874916436 down 1.58E-24 -3.55131909 down 0.023546825 -0.749423217 normal -- -- -- -- -- -- -- -- Molecular Function: DNA binding (GO:0003677);; "K09422|7.2e-127|zma:103641342|K09422 transcription factor MYB, plant | (RefSeq) transcription factor MYB2 " -- [K] Transcription Myb-like DNA-binding domain Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1 -- -- Transcription factor MYB78 [Zea mays] molecular function: binding (GO:0005488) Zm00014a043079 Zm00014a043079 8.820117 393 6.544669 305 4.310034 195 3.666148 139 1.923806 77 1.92354 68 3.783138 160 0.678397 33 1.229783 46 2.201011 100 1.560126 57 1.269459 55 0.831463 30 0.981714 36 3.962161 146 0.000624645 -0.932522675 down 0.003858473 -1.344307918 down 1.34E-08 -2.083554473 down 0.003233635 -1.582815609 down 0.532344344 -0.253968063 normal 0.100607219 -0.627799892 normal 0.519276951 -0.311439455 normal 0.700036454 -0.131721505 normal 0.996988534 -0.001451759 normal 0.707485077 0.088869036 normal -- -- Molecular Function: DNA binding (GO:0003677);; "K09422|2.9e-166|zma:100192609|K09422 transcription factor MYB, plant | (RefSeq) putative MYB DNA-binding domain superfamily protein " -- [K] Transcription Myb-like DNA-binding domain Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1 -- -- Transcription factor MYB78 [Zea mays] molecular function: binding (GO:0005488) Zm00014a007079 Zm00014a007079 118.287079 4313 90.233971 3440 73.248001 2702 44.571877 1381 24.966278 815 36.999226 1059 21.872568 754 2.345692 92 14.205392 434 3.86103 143 1.968879 59 3.790175 134 2.531058 74 4.201592 126 3.859512 117 1.08E-06 -1.152431555 down 6.70E-06 -2.09341738 down 2.56E-60 -4.912512427 down 2.86E-55 -4.68570278 down 0.026556112 -0.895507265 normal 9.01E-27 -3.327494005 down 1.73E-24 -3.094670126 down 0.003293475 -1.004740192 down 0.008968182 -1.008634304 down 0.637008283 0.113540263 normal -- -- "Molecular Function: transcription regulatory region sequence-specific DNA binding (GO:0000976);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: cell differentiation (GO:0030154);; Molecular Function: sequence-specific DNA binding (GO:0043565);; " "K09422|7.1e-153|zma:103632719|K09422 transcription factor MYB, plant | (RefSeq) protein ODORANT1 " -- [K] Transcription Myb-like DNA-binding domain Transcription factor MYB20 OS=Arabidopsis thaliana OX=3702 GN=MYB20 PE=2 SV=1 -- -- protein ODORANT1 [Zea mays] molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699) Zm00014a007081 Zm00014a007081 99.127098 5225 85.493057 4711 60.019886 3200 38.028786 1703 25.231707 1191 31.181767 1290 18.869022 940 7.764863 439 12.376096 546 4.657361 249 6.701427 286 4.917971 251 4.897478 207 5.763295 250 4.554063 199 2.27E-07 -1.168174326 down 2.38E-12 -2.425120416 down 1.01E-50 -4.032849169 down 6.61E-53 -4.052401015 down 0.000492204 -1.093912309 down 3.57E-25 -2.548943895 down 5.65E-30 -2.589335877 down 0.000450262 -1.020968144 down 0.000271347 -1.115264301 down 0.814163636 -0.046448646 normal -- -- "Molecular Function: transcription regulatory region sequence-specific DNA binding (GO:0000976);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: cell differentiation (GO:0030154);; Molecular Function: sequence-specific DNA binding (GO:0043565);; " "K09422|2.9e-112|zma:103632720|K09422 transcription factor MYB, plant | (RefSeq) transcription factor MYB20 " -- [K] Transcription Myb-like DNA-binding domain Transcription factor MYB20 OS=Arabidopsis thaliana OX=3702 GN=MYB20 PE=2 SV=1 -- -- transcription factor MYB20 [Zea mays] molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699) Zm00014a031221 Zm00014a031221 130.219803 7034 108.029663 6101 81.18351 4436 70.69381 3244 68.135109 3295 62.39325 2645 46.203751 2358 21.438652 1241 41.776615 1889 26.950237 1474 19.201172 840 16.480303 862 25.053764 1082 19.049768 846 17.646992 788 0.0020653 -0.632369763 down 4.58E-06 -1.50224835 down 6.00E-21 -2.528347448 down 3.01E-21 -2.485974401 down 0.004309133 -0.80870693 down 2.35E-16 -1.757004266 down 6.46E-22 -1.743305497 down 0.01237608 -0.697268082 normal 0.014109173 -0.709965351 normal 0.941969581 0.014417635 normal -- -- Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; "K09422|2.0e-121|zma:541733|K09422 transcription factor MYB, plant | (RefSeq) transcription factor MYB4 " -- [K] Transcription Myb-like DNA-binding domain Transcription factor MYB4 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB4 PE=2 SV=2 -- -- Myb-related protein Myb4 [Zea mays] molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464) Zm00014a024514 Zm00014a024514 14.998793 464 16.46859 533 8.368284 262 7.410032 195 3.933577 109 5.043045 123 5.081822 149 3.123985 104 3.378794 88 3.379268 106 3.60086 91 3.467528 104 2.680937 67 4.07083 104 3.503435 90 0.000514267 -0.92101091 down 1.63E-06 -1.671794689 down 7.73E-11 -2.087291795 down 1.12E-08 -2.008326624 down 0.164593446 -0.449286049 normal 0.020778328 -0.724724556 normal 0.043012219 -0.676220656 normal 0.488527939 -0.18511002 normal 0.591128917 -0.160771863 normal 0.949402574 0.013652121 normal -- -- "Molecular Function: RNA polymerase II transcription factor activity, sequence-specific DNA binding (GO:0000981);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleoplasm (GO:0005654);; Cellular Component: nucleolus (GO:0005730);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: regulation of transcription from RNA polymerase II promoter (GO:0006357);; Biological Process: biological_process (GO:0008150);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Cellular Component: mediator complex (GO:0016592);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Cellular Component: membrane-enclosed lumen (GO:0031974);; Cellular Component: nuclear lumen (GO:0031981);; Cellular Component: macromolecular complex (GO:0032991);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: non-membrane-bounded organelle (GO:0043228);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Cellular Component: organelle lumen (GO:0043233);; Cellular Component: organelle part (GO:0044422);; Cellular Component: intracellular part (GO:0044424);; Cellular Component: nuclear part (GO:0044428);; Cellular Component: intracellular organelle part (GO:0044446);; Cellular Component: nucleoplasm part (GO:0044451);; Cellular Component: cell part (GO:0044464);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Cellular Component: intracellular organelle lumen (GO:0070013);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; " -- -- [K] Transcription Myb/SANT-like DNA-binding domain Trihelix transcription factor GT-3b OS=Arabidopsis thaliana OX=3702 GN=GT-3B PE=1 SV=1 K Transcription Trihelix transcription factor GT-3b [Zea mays] molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: macromolecular complex (GO:0032991) Zm00014a011569 Zm00014a011569 9.394612 546 5.43044 330 2.798094 165 3.005435 149 1.378513 72 2.387773 109 2.103848 116 0.814898 51 1.648483 81 1.109447 66 2.266801 107 2.482685 140 1.375607 64 0.647686 31 2.441857 118 0.004758174 -0.797145814 down 0.000247514 -1.595505165 down 0.000263564 -1.669865694 down 0.000492465 -1.806928074 down 0.229966718 -0.444634037 normal 0.458001885 -0.297757949 normal 0.247309015 -0.515825725 normal 0.591042751 0.176725671 normal 0.934663571 -0.031144619 normal 0.556705472 -0.144321155 normal -- -- "Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Molecular Function: sequence-specific DNA binding (GO:0043565);; " K12835|8.8e-31|cmax:111493042|K12835 ATP-dependent RNA helicase DDX42 [EC:3.6.4.13] | (RefSeq) DEAD-box ATP-dependent RNA helicase 24 isoform X1 Spliceosome (ko03040) -- -- WRKY DNA -binding domain WRKY transcription factor 28 OS=Arabidopsis thaliana OX=3702 GN=WRKY28 PE=2 SV=1 K Transcription putative WRKY transcription factor 71 [Zea mays] molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488) Zm00014a033135 Zm00014a033135 19.953247 1382 22.232897 1610 7.877251 552 10.496385 618 6.902671 428 6.334795 345 9.08562 595 6.803643 505 4.824713 280 6.533174 458 7.152667 401 8.689887 583 5.169519 286 5.008706 286 10.639382 609 0.006873554 -0.738285089 down 0.002248668 -1.184813622 down 0.000265307 -1.344987122 down 0.003347981 -1.300390914 down 0.476107502 -0.214288388 normal 0.415245175 -0.213042545 normal 0.507711496 -0.236470841 normal 0.920678861 0.02523501 normal 0.981096607 -0.007779784 normal 0.886231904 -0.033812623 normal -- -- "Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Molecular Function: sequence-specific DNA binding (GO:0043565);; " K12835|3.3e-31|cmax:111493042|K12835 ATP-dependent RNA helicase DDX42 [EC:3.6.4.13] | (RefSeq) DEAD-box ATP-dependent RNA helicase 24 isoform X1 Spliceosome (ko03040) -- -- WRKY DNA -binding domain WRKY transcription factor 28 OS=Arabidopsis thaliana OX=3702 GN=WRKY28 PE=2 SV=1 K Transcription putative WRKY transcription factor 28 [Zea mays] molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488) Zm00014a007212 Zm00014a007212 36.180252 2925 47.796329 4039 22.620224 1850 24.442844 1679 14.781074 1070 17.308281 1098 11.59185 885 5.46231 474 8.487602 575 5.971339 489 2.049022 135 3.600334 282 4.737762 306 4.348587 289 3.499905 234 0.003617526 -0.730603534 down 6.14E-08 -1.906926031 down 3.07E-17 -3.220611233 down 4.59E-23 -3.113200079 down 0.000972022 -1.004917328 down 5.91E-10 -2.181401186 down 9.40E-17 -2.1211654 down 0.007128392 -0.846125278 down 0.002209166 -0.878136353 down 0.688733291 0.096643994 normal -- -- "Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Molecular Function: sequence-specific DNA binding (GO:0043565);; " K13424|9.1e-304|zma:100281430|K13424 WRKY transcription factor 33 | (RefSeq) WRKY70 - superfamily of TFs having WRKY and zinc finger domains MAPK signaling pathway - plant (ko04016);; Plant-pathogen interaction (ko04626) -- -- WRKY DNA -binding domain WRKY transcription factor WRKY24 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY24 PE=2 SV=1 K Transcription WRKY transcription factor WRKY24 [Zea mays] molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488) Zm00014a018333 Zm00014a018333 87.202995 7537 106.616501 9634 81.683228 7141 67.126381 4929 45.530178 3523 61.108185 4145 42.588142 3477 8.368953 775 35.003651 2532 10.847076 949 4.913196 344 7.864229 658 12.511143 864 12.287466 873 7.949047 568 0.000812903 -0.641520412 down 0.000681342 -1.42370184 down 9.19E-40 -3.664604096 down 7.31E-43 -3.182085659 down 0.050676916 -0.740572583 normal 1.61E-22 -2.824321851 down 1.03E-21 -2.358426796 down 0.000539626 -1.15880933 down 0.010836356 -0.935964562 normal 0.114246523 0.358845533 normal -- -- "Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Molecular Function: sequence-specific DNA binding (GO:0043565);; " K13424|4.2e-245|sbi:8057730|K13424 WRKY transcription factor 33 | (RefSeq) WRKY transcription factor WRKY24 MAPK signaling pathway - plant (ko04016);; Plant-pathogen interaction (ko04626) -- -- WRKY DNA -binding domain WRKY transcription factor WRKY24 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY24 PE=2 SV=1 K Transcription WRKY transcription factor WRKY24 [Zea mays] molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488) Zm00014a020866 Zm00014a020866 30.098507 2675 30.197306 2806 28.708818 2581 16.208115 1224 16.207909 1290 18.859856 1316 8.996439 755 1.728737 165 14.689478 1093 3.77239 340 1.779046 128 2.583954 223 3.41779 243 3.093533 226 1.937237 143 4.20E-09 -0.811827153 down 0.001668505 -1.420454883 down 2.14E-43 -3.586458203 down 4.77E-53 -3.496549746 down 0.090458764 -0.672898123 normal 8.19E-23 -2.636069263 down 7.33E-28 -2.553267578 down 0.009563208 -0.885072618 down 0.017145893 -0.91393298 normal 0.798086716 0.060313594 normal -- -- "Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Molecular Function: sequence-specific DNA binding (GO:0043565);; " K13424|5.5e-312|zma:103636541|K13424 WRKY transcription factor 33 | (RefSeq) WRKY transcription factor WRKY24 MAPK signaling pathway - plant (ko04016);; Plant-pathogen interaction (ko04626) -- -- WRKY DNA -binding domain WRKY transcription factor WRKY24 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY24 PE=2 SV=1 K Transcription WRKY transcription factor WRKY24 [Zea mays] molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488) Zm00014a029139 Zm00014a029139 99.1437 5222 87.083878 4795 59.616096 3176 40.841522 1828 34.015877 1604 45.552021 1883 20.439898 1017 7.379926 417 38.331749 1690 9.199828 491 3.26433 140 5.631959 288 9.776144 412 4.566253 198 1.899989 83 3.27E-05 -0.910031489 down 0.000164627 -1.595532703 down 5.12E-27 -3.791029877 down 6.95E-15 -3.594150477 down 0.080744004 -0.65465481 normal 6.48E-16 -2.629950162 down 6.94E-09 -2.395460616 down 0.001044801 -1.10749153 down 0.003801717 -1.115243005 down 0.832102567 -0.051934686 normal -- -- "Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Molecular Function: sequence-specific DNA binding (GO:0043565);; " K18834|3.4e-19|pxb:103955058|K18834 WRKY transcription factor 1 | (RefSeq) WRKY transcription factor 1 Plant-pathogen interaction (ko04626) -- -- WRKY DNA -binding domain WRKY transcription factor WRKY28 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY28 PE=2 SV=2 K Transcription WRKY transcription factor WRKY28 [Zea mays] molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488) Zm00014a038524 Zm00014a038524 26.585543 1495 23.101957 1358 19.414621 1104 15.185114 726 8.840324 445 10.286688 454 8.318184 442 2.050967 124 7.330628 345 3.905545 223 3.286794 150 3.014298 165 2.430076 110 3.112583 144 2.812247 131 0.000114202 -0.871883153 down 2.92E-05 -1.692422518 down 4.12E-39 -2.943916655 down 6.23E-41 -3.149290702 down 0.059208486 -0.709455499 normal 4.91E-11 -1.777718729 down 2.30E-12 -1.9619193 down 0.090739721 -0.555359035 normal 0.039841804 -0.745421343 normal 0.294872274 -0.202305302 normal -- -- "Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Molecular Function: sequence-specific DNA binding (GO:0043565);; " K18834|2.0e-19|cmax:111486465|K18834 WRKY transcription factor 1 | (RefSeq) WRKY transcription factor 1-like Plant-pathogen interaction (ko04626) -- -- WRKY DNA -binding domain WRKY transcription factor WRKY28 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY28 PE=2 SV=2 K Transcription WRKY transcription factor WRKY28 [Zea mays] molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488) Zm00014a037844 Zm00014a037844 18.023432 1413 12.032018 986 9.447862 749 7.912798 527 7.291373 512 7.839759 483 6.950805 515 5.483477 461 6.703626 440 6.229875 494 6.384079 405 7.491547 569 9.507952 596 7.550892 487 6.329848 410 0.004324845 -0.671583641 down 0.000259065 -1.094709619 down 3.10E-05 -1.197265808 down 0.003320541 -0.921058919 down 0.080985611 -0.31416966 normal 0.047560353 -0.326175097 normal 0.714052386 -0.072989304 normal 0.980146982 -0.004565535 normal 0.262531606 0.241948869 normal 0.216895678 0.2174814 normal -- -- Molecular Function: metal ion binding (GO:0046872);; K23047|5.0e-43|dcr:108218050|K23047 E3 ubiquitin-protein ligase UNKL [EC:2.3.2.27] | (RefSeq) zinc finger CCCH domain-containing protein 2 -- [R] General function prediction only Ankyrin repeat Zinc finger CCCH domain-containing protein 50 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0568300 PE=2 SV=1 S Function unknown Zinc finger CCCH domain-containing protein 50 [Zea mays] molecular function: binding (GO:0005488) Zm00014a030459 Zm00014a030459 25.994184 1806 18.66008 1355 12.456799 876 7.97602 471 4.210004 262 6.686595 365 4.257133 280 1.372342 103 5.75825 335 1.558615 110 0.985863 56 0.960613 65 2.591519 144 1.12535 65 0.706989 41 6.28E-06 -1.174718146 down 4.27E-06 -1.936230504 down 3.25E-33 -4.055369803 down 1.47E-14 -3.433022441 down 0.146079484 -0.549415118 normal 5.34E-13 -2.344730062 down 2.00E-05 -1.760494469 down 0.001318469 -1.070953375 down 0.037176915 -0.7976504 normal 0.499654968 0.167214965 normal -- -- Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: anatomical structure development (GO:0048856);; -- -- [R] General function prediction only -- Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1 S Function unknown protein TRANSPARENT TESTA 1 [Zea mays] cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502)