Phylogeography of Barbary macaques (Macaca sylvanus) and the origin of the Gibraltar colony -- Modolo et al. 102 (20): 7392 Data Supplement - HTML Page - index.htslp -- Proceedings of the National Academy of Sciences

Modolo et al. 10.1073/pnas.0502186102.

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Supporting Figure 3 Fig. 3.
Frequency distribution of pairwise mutational differences obtained by mismatch analysis with mtDNA hypervariable region I sequences. We analyzed each lineage separately, and we also grouped all populations together. The bar chart indicates the observed values, and the red curve is the model fitted to the data. The yellow and green lines represent the 5% and 95% percentile values. The numbers of nucleotide differences are indicated on the x axis, and their frequencies are indicated on the y axis. A–C represent the three Algerian lineages, D includes all Moroccan populations, and E groups all populations from both Algeria and Morocco together. Note that one of the mutations between haplotypes of Djurdjura is an insertion.

Table 4. Average uncorrected pairwise distances between and within groups and inferred divergence times (t)

Comparison	% divergence	SD	t _divergence
Outgroup:ingroup	15.9	0.93960	5.5 mya
Algeria:Morocco	4.43	0.62	1.24-1.85 mya
Kherrata:Morocco	4.10	0.32	1.22-1.62 mya
Akfadou:Djurdjura	2.6	0.18	0.780-1.01 mya
Kherrata	0.59	0.40	64-363 kya
Morocco	0.55	0.22	110-282 kya
Akfadou	0.21		70-78 kya
Djurdjura	0.21		70-78 kya

Note that divergence time, t_divergence, was based on an initial speciation time for Macaca of 5.5 million years ago (mya). kya, thousand years ago.