POS,#CHROM,REF,ALT,QUAL,FILTER,INFO,Variant type,Allele Frequency
58,18s,C,CT,6676,PASS,"DP=236397;AF=0.004484;SB=1;DP4=125658,110873,571,489;INDEL;HRUN=1",Indel,0.004484
145,18s,G,T,3509,PASS,"DP=260945;AF=0.008416;SB=41;DP4=150039,108519,1182,1014",Substitution,0.008416
146,18s,G,C,13663,PASS,"DP=260255;AF=0.013483;SB=123;DP4=149269,107101,1829,1680",Substitution,0.013483
148,18s,T,A,49314,PASS,"DP=260296;AF=0.041522;SB=271;DP4=145040,103552,5729,5079",Substitution,0.041522
151,18s,CTG,C,524,PASS,"DP=258904;AF=0.000375;SB=5;DP4=151661,108646,62,35;INDEL;HRUN=1",Indel,0.000375
152,18s,TGTGG,T,6523,PASS,"DP=259109;AF=0.002065;SB=15;DP4=151543,108594,287,248;INDEL;HRUN=1",Indel,0.002065
162,18s,C,A,19424,PASS,"DP=262116;AF=0.015108;SB=9;DP4=148991,109090,2237,1723",Substitution,0.015108
171,18s,A,T,3470,PASS,"DP=261028;AF=0.010750;SB=63;DP4=148689,107911,1492,1314",Substitution,0.01075
173,18s,A,G,517,PASS,"DP=260198;AF=0.010434;SB=30;DP4=148715,105697,1500,1215",Substitution,0.010434
180,18s,G,A,3579,PASS,"DP=257752;AF=0.006778;SB=47;DP4=148718,106996,927,820",Substitution,0.006778
182,18s,C,A,49314,PASS,"DP=257380;AF=0.041429;SB=109;DP4=143377,103068,5849,4814",Substitution,0.041429
186,18s,C,T,582,PASS,"DP=255895;AF=0.003126;SB=31;DP4=147722,107133,416,384",Substitution,0.003126
187,18s,G,A,49314,PASS,"DP=255812;AF=0.025081;SB=107;DP4=145168,104001,3468,2948",Substitution,0.025081
191,18s,AC,A,1322,PASS,"DP=254186;AF=0.000791;SB=0;DP4=147947,107591,115,86;INDEL;HRUN=5",Indel,0.000791
192,18s,C,T,19631,PASS,"DP=255386;AF=0.014672;SB=45;DP4=145313,105893,2039,1708",Substitution,0.014672
197,18s,T,G,312,PASS,"DP=255747;AF=0.010284;SB=2309;DP4=144266,106962,995,2376",Substitution,0.010284
200,18s,G,A,10059,PASS,"DP=251711;AF=0.010417;SB=28;DP4=141743,107029,1412,1210",Substitution,0.010417
201,18s,C,CG,8523,PASS,"DP=250678;AF=0.004955;SB=6;DP4=142949,108562,728,514;INDEL;HRUN=7",Indel,0.004955
201,18s,CGG,C,171,PASS,"DP=250678;AF=0.000802;SB=0;DP4=143511,108956,116,85;INDEL;HRUN=7",Indel,0.000802
201,18s,C,T,4663,PASS,"DP=252755;AF=0.006912;SB=2;DP4=142535,108090,1006,741",Substitution,0.006912
206,18s,G,A,49314,PASS,"DP=251013;AF=0.038655;SB=81;DP4=138152,102933,5271,4432",Substitution,0.038655
207,18s,G,A,49314,PASS,"DP=250457;AF=0.038625;SB=106;DP4=138066,102320,5223,4451",Substitution,0.038625
213,18s,G,A,159,PASS,"DP=249150;AF=0.003139;SB=7;DP4=142720,104541,433,349",Substitution,0.003139
213,18s,G,C,307,PASS,"DP=249150;AF=0.003496;SB=35;DP4=142720,104541,450,422",Substitution,0.003496
222,18s,T,G,1631,PASS,"DP=248498;AF=0.007855;SB=217;DP4=141658,104286,912,1046",Substitution,0.007855
228,18s,C,T,301,PASS,"DP=247065;AF=0.003651;SB=54;DP4=140337,105319,446,456",Substitution,0.003651
239,18s,C,T,501,PASS,"DP=246894;AF=0.003755;SB=11;DP4=139530,105868,500,427",Substitution,0.003755
240,18s,G,A,16178,PASS,"DP=246435;AF=0.016605;SB=80;DP4=137733,103991,2147,1945",Substitution,0.016605
253,18s,C,T,19367,PASS,"DP=241635;AF=0.015101;SB=19;DP4=134620,103104,1989,1660",Substitution,0.015101
254,18s,C,T,18552,PASS,"DP=241440;AF=0.015031;SB=6;DP4=134336,103227,2017,1612",Substitution,0.015031
255,18s,G,A,16047,PASS,"DP=241769;AF=0.015387;SB=16;DP4=134791,102819,2040,1680",Substitution,0.015387
256,18s,G,GC,94,PASS,"DP=239355;AF=0.000175;SB=6;DP4=136591,104527,28,14;INDEL;HRUN=4",Indel,0.000175
256,18s,G,T,697,PASS,"DP=241160;AF=0.003674;SB=8;DP4=136051,104057,480,406",Substitution,0.003674
259,18s,C,G,143,PASS,"DP=241307;AF=0.002826;SB=41;DP4=135105,105373,332,352",Substitution,0.002826
260,18s,C,A,13910,PASS,"DP=241095;AF=0.012464;SB=4;DP4=133396,104551,1657,1348",Substitution,0.012464
261,18s,G,T,1200,PASS,"DP=240872;AF=0.004932;SB=53;DP4=133920,104858,587,601",Substitution,0.004932
264,18s,C,CA,2426,PASS,"DP=238107;AF=0.006694;SB=22;DP4=132829,104874,835,759;INDEL;HRUN=6",Indel,0.006694
264,18s,C,CT,67,PASS,"DP=238107;AF=0.002507;SB=19;DP4=132829,104874,302,295;INDEL;HRUN=6",Indel,0.002507
264,18s,C,G,130,PASS,"DP=239933;AF=0.002842;SB=152;DP4=133420,105239,278,409",Substitution,0.002842
266,18s,G,GA,1589,PASS,"DP=237074;AF=0.003678;SB=43;DP4=132361,105441,425,447;INDEL;HRUN=6",Indel,0.003678
269,18s,G,GAGGGGT,1834,PASS,"DP=233658;AF=0.005127;SB=20;DP4=129654,105592,614,584;INDEL;HRUN=6",Indel,0.005127
270,18s,G,GT,26031,PASS,"DP=232564;AF=0.007005;SB=45;DP4=128208,104636,812,817;INDEL;HRUN=1",Indel,0.007005
270,18s,G,T,2376,PASS,"DP=234477;AF=0.019115;SB=74;DP4=126662,103211,2284,2198",Substitution,0.019115
271,18s,C,T,167,PASS,"DP=233712;AF=0.003136;SB=16;DP4=127792,104855,371,362",Substitution,0.003136
272,18s,G,A,620,PASS,"DP=233687;AF=0.004202;SB=26;DP4=127793,104767,492,490",Substitution,0.004202
275,18s,C,T,48430,PASS,"DP=234242;AF=0.025657;SB=100;DP4=124839,103214,3035,2975",Substitution,0.025657
279,18s,G,A,29522,PASS,"DP=234083;AF=0.019907;SB=92;DP4=125556,103642,2340,2320",Substitution,0.019907
280,18s,G,C,49236,PASS,"DP=233343;AF=0.025949;SB=111;DP4=124481,102652,3049,3006",Substitution,0.025949
281,18s,C,T,10714,PASS,"DP=234868;AF=0.010640;SB=33;DP4=126838,105319,1277,1222",Substitution,0.01064
282,18s,G,A,16267,PASS,"DP=236073;AF=0.013987;SB=74;DP4=127398,105149,1650,1652",Substitution,0.013987
287,18s,TG,T,163,PASS,"DP=236217;AF=0.000203;SB=18;DP4=129706,107949,35,13;INDEL;HRUN=2",Indel,0.000203
292,18s,ACT,A,406,PASS,"DP=235404;AF=0.000336;SB=13;DP4=127807,108751,52,27;INDEL;HRUN=1",Indel,0.000336
292,18s,A,C,3744,PASS,"DP=236637;AF=0.010856;SB=1;DP4=126009,107412,1378,1193",Substitution,0.010856
295,18s,C,G,148,PASS,"DP=236431;AF=0.003904;SB=1;DP4=126269,108936,500,423",Substitution,0.003904
297,18s,A,G,220,PASS,"DP=236430;AF=0.009419;SB=24;DP4=123970,108627,1117,1110",Substitution,0.009419
302,18s,A,G,19791,PASS,"DP=236524;AF=0.022814;SB=72;DP4=121444,108515,2650,2751",Substitution,0.022814
306,18s,C,T,4189,PASS,"DP=236105;AF=0.007344;SB=26;DP4=123567,110458,852,882",Substitution,0.007344
307,18s,G,A,7879,PASS,"DP=235946;AF=0.009837;SB=62;DP4=123581,109733,1108,1213",Substitution,0.009837
310,18s,C,T,720,PASS,"DP=233511;AF=0.003623;SB=36;DP4=123308,109060,395,451",Substitution,0.003623
311,18s,C,T,11573,PASS,"DP=233328;AF=0.011765;SB=49;DP4=122583,107775,1345,1400",Substitution,0.011765
312,18s,G,A,49314,PASS,"DP=233858;AF=0.038913;SB=244;DP4=120319,104179,4373,4727",Substitution,0.038913
319,18s,C,T,4410,PASS,"DP=232494;AF=0.008022;SB=21;DP4=121576,108443,928,937",Substitution,0.008022
320,18s,G,GC,49314,PASS,"DP=230873;AF=0.021856;SB=2;DP4=120075,107251,2685,2361;INDEL;HRUN=6",Indel,0.021856
320,18s,G,A,5080,PASS,"DP=232383;AF=0.007797;SB=96;DP4=121637,108532,822,990",Substitution,0.007797
326,18s,C,CT,9646,PASS,"DP=232213;AF=0.003126;SB=4;DP4=121178,112372,364,362;INDEL;HRUN=1",Indel,0.003126
332,18s,G,A,49314,PASS,"DP=233249;AF=0.043426;SB=131;DP4=114652,108304,4823,5306",Substitution,0.043426
334,18s,C,G,17029,PASS,"DP=232427;AF=0.013574;SB=15;DP4=117219,111181,1557,1598",Substitution,0.013574
334,18s,C,T,49314,PASS,"DP=232427;AF=0.003068;SB=1;DP4=117219,111181,360,353",Substitution,0.003068
335,18s,G,A,489,PASS,"DP=232904;AF=0.003340;SB=3;DP4=119621,112329,391,387",Substitution,0.00334
337,18s,C,T,19715,PASS,"DP=231963;AF=0.015666;SB=69;DP4=117568,110541,1712,1922",Substitution,0.015666
346,18s,C,A,5408,PASS,"DP=233115;AF=0.008858;SB=1;DP4=118186,111575,1052,1013",Substitution,0.008858
346,18s,C,G,49314,PASS,"DP=233115;AF=0.005195;SB=41;DP4=118186,111575,554,657",Substitution,0.005195
347,18s,G,T,2383,PASS,"DP=232521;AF=0.005561;SB=40;DP4=119619,111324,599,695",Substitution,0.005561
350,18s,C,A,2545,PASS,"DP=235091;AF=0.006580;SB=15;DP4=120265,112461,756,791",Substitution,0.00658
365,18s,C,A,117,PASS,"DP=239377;AF=0.003710;SB=96;DP4=118196,120159,535,353",Substitution,0.00371
367,18s,T,G,285,PASS,"DP=240058;AF=0.008440;SB=1278;DP4=116509,121156,1527,499",Substitution,0.00844
369,18s,C,T,8487,PASS,"DP=240457;AF=0.010867;SB=35;DP4=116437,120902,1188,1425",Substitution,0.010867
370,18s,G,A,16405,PASS,"DP=240551;AF=0.013610;SB=24;DP4=115928,118849,1533,1741",Substitution,0.01361
370,18s,G,T,49314,PASS,"DP=240551;AF=0.009981;SB=9;DP4=115928,118849,1147,1254",Substitution,0.009981
379,18s,C,T,15390,PASS,"DP=242651;AF=0.013563;SB=22;DP4=116375,122684,1523,1768",Substitution,0.013563
380,18s,G,A,4029,PASS,"DP=242681;AF=0.006342;SB=6;DP4=117971,122977,729,810",Substitution,0.006342
382,18s,C,T,49314,PASS,"DP=244169;AF=0.038203;SB=62;DP4=114942,119663,4323,5005",Substitution,0.038203
383,18s,G,A,413,PASS,"DP=244788;AF=0.003329;SB=6;DP4=119474,124250,381,434",Substitution,0.003329
390,18s,C,T,131,PASS,"DP=247694;AF=0.003197;SB=1;DP4=118674,127893,376,416",Substitution,0.003197
402,18s,C,T,21138,PASS,"DP=253032;AF=0.015591;SB=1;DP4=115412,133355,1818,2127",Substitution,0.015591
406,18s,T,A,6183,PASS,"DP=253735;AF=0.013301;SB=2;DP4=114687,134578,1572,1803",Substitution,0.013301
409,18s,CGG,C,1145,PASS,"DP=253725;AF=0.001316;SB=7;DP4=117041,137701,166,168;INDEL;HRUN=4",Indel,0.001316
409,18s,C,A,49314,PASS,"DP=255078;AF=0.003513;SB=5;DP4=115011,135131,427,469",Substitution,0.003513
409,18s,C,T,19682,PASS,"DP=255078;AF=0.014999;SB=6;DP4=115011,135131,1723,2103",Substitution,0.014999
410,18s,G,A,16457,PASS,"DP=255996;AF=0.013301;SB=10;DP4=115952,136076,1515,1890",Substitution,0.013301
411,18s,G,A,84,PASS,"DP=255531;AF=0.002649;SB=7;DP4=116585,137707,292,385",Substitution,0.002649
417,18s,C,T,104,PASS,"DP=258757;AF=0.002670;SB=5;DP4=117636,140150,301,390",Substitution,0.00267
420,18s,G,A,14771,PASS,"DP=260476;AF=0.013022;SB=0;DP4=117437,139339,1551,1841",Substitution,0.013022
424,18s,C,G,381,PASS,"DP=261581;AF=0.003150;SB=2;DP4=118928,141088,369,455",Substitution,0.00315
425,18s,G,A,14612,PASS,"DP=262326;AF=0.012099;SB=9;DP4=119042,139713,1416,1758",Substitution,0.012099
430,18s,C,T,49314,PASS,"DP=262447;AF=0.037314;SB=5;DP4=114929,137397,4410,5383",Substitution,0.037314
431,18s,G,A,430,PASS,"DP=262073;AF=0.003396;SB=1;DP4=118980,141967,399,491",Substitution,0.003396
432,18s,G,T,4651,PASS,"DP=261560;AF=0.006614;SB=5;DP4=117843,141749,764,966",Substitution,0.006614
435,18s,A,T,435,PASS,"DP=263151;AF=0.003150;SB=136;DP4=117725,144351,264,565",Substitution,0.00315
436,18s,G,A,3476,PASS,"DP=263745;AF=0.005778;SB=0;DP4=117104,144404,682,842",Substitution,0.005778
441,18s,C,A,472,PASS,"DP=264409;AF=0.003347;SB=1;DP4=117904,145016,391,494",Substitution,0.003347
444,18s,G,T,520,PASS,"DP=265877;AF=0.003013;SB=16;DP4=119043,145945,328,473",Substitution,0.003013
450,18s,C,T,49314,PASS,"DP=267264;AF=0.032967;SB=2;DP4=116196,142017,3989,4822",Substitution,0.032967
462,18s,C,T,49314,PASS,"DP=266843;AF=0.037970;SB=2;DP4=115347,141094,4588,5545",Substitution,0.03797
472,18s,C,T,347,PASS,"DP=266286;AF=0.002678;SB=41;DP4=119865,145512,269,444",Substitution,0.002678
477,18s,G,A,66,PASS,"DP=267471;AF=0.002397;SB=56;DP4=120413,146140,230,411",Substitution,0.002397
478,18s,G,A,7873,PASS,"DP=266865;AF=0.008068;SB=7;DP4=119212,145252,940,1213",Substitution,0.008068
480,18s,G,A,49314,PASS,"DP=267057;AF=0.038681;SB=6;DP4=116408,140064,4628,5702",Substitution,0.038681
481,18s,C,T,49314,PASS,"DP=267239;AF=0.031852;SB=6;DP4=117348,141100,3809,4703",Substitution,0.031852
482,18s,G,T,4222,PASS,"DP=267805;AF=0.006337;SB=44;DP4=120698,145161,686,1011",Substitution,0.006337
492,18s,C,T,170,PASS,"DP=270066;AF=0.002644;SB=25;DP4=120059,149065,359,355",Substitution,0.002644
496,18s,C,T,419,PASS,"DP=273150;AF=0.002958;SB=29;DP4=120510,151613,404,404",Substitution,0.002958
497,18s,C,T,240,PASS,"DP=273359;AF=0.003058;SB=2;DP4=120339,151909,362,474",Substitution,0.003058
498,18s,C,T,13658,PASS,"DP=273079;AF=0.011586;SB=1;DP4=118981,150298,1386,1778",Substitution,0.011586
499,18s,G,T,319,PASS,"DP=274037;AF=0.003098;SB=2;DP4=121380,151129,388,461",Substitution,0.003098
500,18s,A,AC,142,PASS,"DP=272215;AF=0.000173;SB=15;DP4=122088,151983,13,34;INDEL;HRUN=3",Indel,0.000173
502,18s,C,A,6832,PASS,"DP=275028;AF=0.008959;SB=7;DP4=120432,150569,1060,1404",Substitution,0.008959
502,18s,C,T,49314,PASS,"DP=275028;AF=0.005330;SB=20;DP4=120432,150569,701,765",Substitution,0.00533
503,18s,CG,C,7567,PASS,"DP=273190;AF=0.002302;SB=4;DP4=122138,152664,267,362;INDEL;HRUN=4",Indel,0.002302
504,18s,G,A,6664,PASS,"DP=275837;AF=0.008389;SB=2;DP4=121617,150994,1016,1298",Substitution,0.008389
505,18s,G,A,30804,PASS,"DP=275758;AF=0.021029;SB=35;DP4=120335,149296,2728,3071",Substitution,0.021029
506,18s,G,A,9835,PASS,"DP=276407;AF=0.011877;SB=20;DP4=121860,150942,1541,1742",Substitution,0.011877
509,18s,G,T,75,PASS,"DP=277011;AF=0.002628;SB=91;DP4=124140,152066,245,483",Substitution,0.002628
517,18s,C,T,18353,PASS,"DP=276026;AF=0.014549;SB=15;DP4=124051,147504,1906,2110",Substitution,0.014549
518,18s,G,A,1302,PASS,"DP=277006;AF=0.005007;SB=44;DP4=126345,148785,560,827",Substitution,0.005007
522,18s,A,C,6038,PASS,"DP=278190;AF=0.011902;SB=112;DP4=126279,148131,1325,1986",Substitution,0.011902
524,18s,TAAC,T,16345,PASS,"DP=277949;AF=0.003994;SB=2;DP4=128384,150273,502,608;INDEL;HRUN=2",Indel,0.003994
526,18s,A,C,3495,PASS,"DP=279914;AF=0.007949;SB=54;DP4=127825,148546,920,1305",Substitution,0.007949
527,18s,C,A,72,PASS,"DP=280659;AF=0.002658;SB=54;DP4=128966,149719,282,464",Substitution,0.002658
543,18s,C,T,36938,PASS,"DP=277626;AF=0.019861;SB=5;DP4=129450,142386,2665,2849",Substitution,0.019861
544,18s,G,A,1253,PASS,"DP=279423;AF=0.004234;SB=87;DP4=133629,143434,467,716",Substitution,0.004234
544,18s,G,T,983,PASS,"DP=279423;AF=0.003947;SB=2;DP4=133629,143434,523,580",Substitution,0.003947
548,18s,C,T,47569,PASS,"DP=281053;AF=0.022789;SB=6;DP4=132755,140929,3159,3246",Substitution,0.022789
567,18s,C,G,277,PASS,"DP=279609;AF=0.003129;SB=7;DP4=141582,136872,424,451",Substitution,0.003129
579,18s,C,T,6176,PASS,"DP=277353;AF=0.008815;SB=28;DP4=143877,130535,1203,1242",Substitution,0.008815
582,18s,TA,T,327,PASS,"DP=274105;AF=0.000642;SB=0;DP4=145267,130985,92,84;INDEL;HRUN=2",Indel,0.000642
585,18s,C,T,45577,PASS,"DP=274330;AF=0.024164;SB=1;DP4=142469,124517,3518,3111",Substitution,0.024164
586,18s,G,A,282,PASS,"DP=274541;AF=0.003173;SB=1;DP4=146820,126495,462,409",Substitution,0.003173
588,18s,G,A,7897,PASS,"DP=275016;AF=0.009734;SB=9;DP4=146589,125335,1485,1192",Substitution,0.009734
593,18s,C,A,587,PASS,"DP=273266;AF=0.004168;SB=5;DP4=148588,123427,641,498",Substitution,0.004168
598,18s,G,T,540,PASS,"DP=272594;AF=0.003547;SB=55;DP4=149562,121986,605,362",Substitution,0.003547
603,18s,C,A,1032,PASS,"DP=271503;AF=0.003720;SB=45;DP4=148520,121888,488,522",Substitution,0.00372
606,18s,G,A,16135,PASS,"DP=271426;AF=0.013160;SB=1;DP4=146822,120266,1973,1599",Substitution,0.01316
608,18s,C,T,226,PASS,"DP=270712;AF=0.003055;SB=2;DP4=148502,121038,464,363",Substitution,0.003055
610,18s,G,A,46559,PASS,"DP=269868;AF=0.022941;SB=6;DP4=145222,118187,3463,2729",Substitution,0.022941
617,18s,G,A,581,PASS,"DP=269394;AF=0.002958;SB=10;DP4=147144,121229,461,336",Substitution,0.002958
622,18s,C,T,2012,PASS,"DP=269511;AF=0.005313;SB=9;DP4=147974,119785,822,610",Substitution,0.005313
623,18s,G,A,30990,PASS,"DP=268693;AF=0.017596;SB=24;DP4=146416,117288,2525,2203",Substitution,0.017596
624,18s,C,T,9885,PASS,"DP=269088;AF=0.009837;SB=29;DP4=148368,117523,1394,1253",Substitution,0.009837
625,18s,G,A,13997,PASS,"DP=268884;AF=0.012753;SB=1;DP4=148062,116916,1929,1500",Substitution,0.012753
635,18s,G,A,132,PASS,"DP=268376;AF=0.002396;SB=33;DP4=151545,115842,320,323",Substitution,0.002396
640,18s,A,C,3463,PASS,"DP=271211;AF=0.008097;SB=0;DP4=153657,115070,1252,944",Substitution,0.008097
644,18s,G,A,208,PASS,"DP=271872;AF=0.002810;SB=18;DP4=155681,115055,406,358",Substitution,0.00281
645,18s,C,T,124,PASS,"DP=271590;AF=0.003074;SB=43;DP4=156237,113976,424,411",Substitution,0.003074
646,18s,G,A,3201,PASS,"DP=271715;AF=0.008299;SB=2;DP4=155578,111906,1299,956",Substitution,0.008299
646,18s,G,T,1809,PASS,"DP=271715;AF=0.006971;SB=2233;DP4=155578,111906,417,1477",Substitution,0.006971
658,18s,TGCTGCA,T,790,PASS,"DP=270291;AF=0.000499;SB=16;DP4=157647,114582,65,70;INDEL;HRUN=1",Indel,0.000499
660,18s,C,T,6518,PASS,"DP=272139;AF=0.008723;SB=14;DP4=156725,112425,1331,1043",Substitution,0.008723
663,18s,C,T,1612,PASS,"DP=272818;AF=0.005330;SB=0;DP4=157953,112573,854,600",Substitution,0.00533
675,18s,T,C,75,PASS,"DP=271446;AF=0.004093;SB=235;DP4=158294,111212,485,629",Substitution,0.004093
676,18s,C,G,540,PASS,"DP=271742;AF=0.004188;SB=244;DP4=158065,111007,494,644",Substitution,0.004188
676,18s,C,T,836,PASS,"DP=271742;AF=0.004622;SB=37;DP4=158065,111007,672,584",Substitution,0.004622
677,18s,G,A,49314,PASS,"DP=272203;AF=0.004181;SB=125;DP4=157873,109767,549,590",Substitution,0.004181
677,18s,G,C,5886,PASS,"DP=272203;AF=0.009724;SB=5;DP4=157873,109767,1534,1115",Substitution,0.009724
684,18s,G,A,2412,PASS,"DP=273152;AF=0.007326;SB=3;DP4=159149,111162,1160,841",Substitution,0.007326
694,18s,G,A,3026,PASS,"DP=265231;AF=0.005162;SB=20;DP4=153531,110118,749,620",Substitution,0.005162
696,18s,G,A,1134,PASS,"DP=264830;AF=0.004222;SB=75;DP4=153772,109705,560,558",Substitution,0.004222
699,18s,C,T,2350,PASS,"DP=261529;AF=0.005720;SB=22;DP4=151332,107459,821,675",Substitution,0.00572
701,18s,G,T,582,PASS,"DP=261074;AF=0.003555;SB=94;DP4=151675,108392,446,482",Substitution,0.003555
703,18s,C,CT,499,PASS,"DP=257887;AF=0.000977;SB=3;DP4=150556,109335,152,100;INDEL;HRUN=2",Indel,0.000977
703,18s,CGGTCCGCCGCG,C,766,PASS,"DP=257887;AF=0.002959;SB=42;DP4=150321,109058,387,376;INDEL;HRUN=2",Indel,0.002959
703,18s,C,A,357,PASS,"DP=260143;AF=0.003494;SB=92;DP4=150160,108215,435,474",Substitution,0.003494
704,18s,GGTCCGCCGCGA,G,13675,PASS,"DP=258601;AF=0.003739;SB=10;DP4=150376,108723,588,379;INDEL;HRUN=2",Indel,0.003739
704,18s,G,A,530,PASS,"DP=260066;AF=0.003887;SB=2;DP4=149757,108047,578,433",Substitution,0.003887
706,18s,TCCGCCGCGAGGC,T,499,PASS,"DP=258875;AF=0.000973;SB=3;DP4=150247,109867,152,100;INDEL;HRUN=2",Indel,0.000973
708,18s,C,T,33378,PASS,"DP=260167;AF=0.020083;SB=10;DP4=145020,107671,3062,2163",Substitution,0.020083
711,18s,C,T,2982,PASS,"DP=260755;AF=0.006500;SB=82;DP4=146935,109706,850,845",Substitution,0.0065
712,18s,G,A,44478,PASS,"DP=260434;AF=0.022562;SB=10;DP4=144217,108110,3292,2584",Substitution,0.022562
713,18s,C,G,4600,PASS,"DP=260889;AF=0.007080;SB=123;DP4=146292,109641,900,947",Substitution,0.00708
713,18s,C,T,49314,PASS,"DP=260889;AF=0.003469;SB=7;DP4=146292,109641,497,408",Substitution,0.003469
715,18s,A,T,2523,PASS,"DP=261526;AF=0.009403;SB=2147483647;DP4=147632,109168,408,2051",Substitution,0.009403
725,18s,C,T,1877,PASS,"DP=262008;AF=0.004775;SB=0;DP4=143441,117127,689,562",Substitution,0.004775
726,18s,C,A,49314,PASS,"DP=262139;AF=0.004089;SB=1;DP4=141571,116503,582,490",Substitution,0.004089
726,18s,C,G,2649,PASS,"DP=262139;AF=0.006138;SB=10;DP4=141571,116503,851,764",Substitution,0.006138
726,18s,C,T,1505,PASS,"DP=262139;AF=0.005093;SB=10;DP4=141571,116503,701,634",Substitution,0.005093
727,18s,G,A,8201,PASS,"DP=261967;AF=0.008833;SB=2;DP4=142189,117100,1281,1033",Substitution,0.008833
730,18s,C,T,5589,PASS,"DP=263292;AF=0.008173;SB=19;DP4=141561,119304,1108,1044",Substitution,0.008173
731,18s,G,A,23168,PASS,"DP=263587;AF=0.016655;SB=0;DP4=140448,118379,2374,2016",Substitution,0.016655
732,18s,T,TC,1457,PASS,"DP=261609;AF=0.000803;SB=3;DP4=142343,120761,120,90;INDEL;HRUN=4",Indel,0.000803
736,18s,C,T,1863,PASS,"DP=262943;AF=0.005024;SB=2;DP4=139109,122361,713,608",Substitution,0.005024
737,18s,G,A,7591,PASS,"DP=262603;AF=0.008370;SB=35;DP4=138337,121714,1083,1115",Substitution,0.00837
739,18s,C,T,1618,PASS,"DP=263369;AF=0.004655;SB=1;DP4=138742,123174,656,570",Substitution,0.004655
740,18s,C,T,1588,PASS,"DP=263696;AF=0.004744;SB=1;DP4=138335,123884,667,584",Substitution,0.004744
741,18s,C,G,401,PASS,"DP=264840;AF=0.002926;SB=136;DP4=138807,125062,305,478",Substitution,0.002926
744,18s,G,A,268,PASS,"DP=263678;AF=0.002799;SB=97;DP4=136518,126156,297,441",Substitution,0.002799
745,18s,C,A,713,PASS,"DP=264132;AF=0.003347;SB=104;DP4=136546,126611,360,524",Substitution,0.003347
750,18s,C,T,49314,PASS,"DP=265232;AF=0.025661;SB=12;DP4=132181,125979,3404,3402",Substitution,0.025661
751,18s,G,A,507,PASS,"DP=265828;AF=0.003442;SB=11;DP4=135256,129390,496,419",Substitution,0.003442
753,18s,C,T,7041,PASS,"DP=265707;AF=0.007813;SB=5;DP4=134565,128850,1086,990",Substitution,0.007813
760,18s,TC,T,64,PASS,"DP=266494;AF=0.000150;SB=0;DP4=135566,132150,20,20;INDEL;HRUN=1",Indel,0.00015
760,18s,T,C,3666,PASS,"DP=267756;AF=0.008489;SB=0;DP4=133007,130716,1152,1121",Substitution,0.008489
761,18s,C,G,49314,PASS,"DP=268007;AF=0.008261;SB=5;DP4=132842,129291,1149,1070",Substitution,0.008261
761,18s,C,T,16339,PASS,"DP=268007;AF=0.012589;SB=1;DP4=132842,129291,1697,1677",Substitution,0.012589
763,18s,A,G,3376,PASS,"DP=267941;AF=0.009271;SB=8;DP4=135035,129664,1230,1255",Substitution,0.009271
766,18s,C,T,3577,PASS,"DP=268104;AF=0.005509;SB=1;DP4=135575,130803,758,719",Substitution,0.005509
781,18s,C,T,325,PASS,"DP=264074;AF=0.003276;SB=4;DP4=128772,134165,411,454",Substitution,0.003276
782,18s,C,CT,1001,PASS,"DP=261825;AF=0.002143;SB=15;DP4=128819,135133,300,261;INDEL;HRUN=3",Indel,0.002143
782,18s,CCG,C,3215,PASS,"DP=261825;AF=0.006061;SB=1;DP4=128350,134576,769,818;INDEL;HRUN=3",Indel,0.006061
783,18s,CGCG,C,1014,PASS,"DP=261024;AF=0.002149;SB=16;DP4=127979,134945,300,261;INDEL;HRUN=1",Indel,0.002149
783,18s,C,T,18295,PASS,"DP=263485;AF=0.015151;SB=2;DP4=125438,132264,1963,2029",Substitution,0.015151
785,18s,CGG,C,49314,PASS,"DP=260143;AF=0.021284;SB=18;DP4=125309,131571,2608,2929;INDEL;HRUN=4",Indel,0.021284
787,18s,G,T,268,PASS,"DP=261229;AF=0.008885;SB=0;DP4=123083,130148,1131,1190",Substitution,0.008885
793,18s,G,A,13909,PASS,"DP=259077;AF=0.012232;SB=8;DP4=123385,131287,1495,1674",Substitution,0.012232
793,18s,G,T,49314,PASS,"DP=259077;AF=0.004200;SB=23;DP4=123385,131287,480,608",Substitution,0.0042
798,18s,GTTTAC,G,5030,PASS,"DP=254461;AF=0.001796;SB=3;DP4=125812,130683,233,224;INDEL;HRUN=3",Indel,0.001796
798,18s,G,A,9074,PASS,"DP=256961;AF=0.010566;SB=18;DP4=124400,128921,1269,1446",Substitution,0.010566
798,18s,G,T,49314,PASS,"DP=256961;AF=0.003261;SB=93;DP4=124400,128921,321,517",Substitution,0.003261
811,18s,AAATT,A,280,PASS,"DP=251042;AF=0.000287;SB=0;DP4=125155,127568,36,36;INDEL;HRUN=6",Indel,0.000287
813,18s,A,G,702,PASS,"DP=251881;AF=0.005967;SB=2;DP4=123818,125891,756,748",Substitution,0.005967
815,18s,TAG,T,11308,PASS,"DP=248759;AF=0.003320;SB=0;DP4=124118,125837,412,414;INDEL;HRUN=1",Indel,0.00332
821,18s,G,T,68,PASS,"DP=247042;AF=0.003400;SB=2;DP4=122038,124064,426,414",Substitution,0.0034
833,18s,C,T,44657,PASS,"DP=244528;AF=0.022840;SB=27;DP4=118427,120256,2653,2932",Substitution,0.02284
836,18s,G,A,12520,PASS,"DP=246161;AF=0.012029;SB=1;DP4=120822,122071,1481,1480",Substitution,0.012029
841,18s,G,A,16412,PASS,"DP=246626;AF=0.012967;SB=4;DP4=120846,122331,1561,1637",Substitution,0.012967
845,18s,G,A,2609,PASS,"DP=252396;AF=0.005824;SB=6;DP4=123197,127445,699,771",Substitution,0.005824
851,18s,C,T,10710,PASS,"DP=254895;AF=0.011075;SB=6;DP4=121366,130389,1395,1428",Substitution,0.011075
852,18s,G,A,49314,PASS,"DP=254898;AF=0.003084;SB=15;DP4=121181,129193,349,437",Substitution,0.003084
852,18s,G,T,19761,PASS,"DP=254898;AF=0.014206;SB=31;DP4=121181,129193,1649,1972",Substitution,0.014206
853,18s,C,A,453,PASS,"DP=255933;AF=0.003005;SB=0;DP4=123438,131660,375,394",Substitution,0.003005
858,18s,A,T,417,PASS,"DP=259653;AF=0.009493;SB=38;DP4=123203,132919,1090,1375",Substitution,0.009493
869,18s,A,AATAGGACC,838,PASS,"DP=261744;AF=0.000481;SB=7;DP4=126275,136920,68,58;INDEL;HRUN=2",Indel,0.000481
874,18s,G,A,2032,PASS,"DP=266160;AF=0.005876;SB=11;DP4=126687,137571,714,850",Substitution,0.005876
877,18s,C,T,423,PASS,"DP=267761;AF=0.003623;SB=0;DP4=127440,139001,463,507",Substitution,0.003623
878,18s,G,A,3490,PASS,"DP=268094;AF=0.005815;SB=1;DP4=127571,138628,755,804",Substitution,0.005815
879,18s,C,T,262,PASS,"DP=268587;AF=0.002878;SB=0;DP4=128161,139303,372,401",Substitution,0.002878
880,18s,G,A,2384,PASS,"DP=269783;AF=0.005938;SB=8;DP4=128485,139157,740,862",Substitution,0.005938
889,18s,T,C,3749,PASS,"DP=277378;AF=0.008667;SB=15;DP4=130288,143958,1087,1317",Substitution,0.008667
899,18s,TC,T,322,PASS,"DP=280674;AF=0.002248;SB=0;DP4=134266,147558,299,332;INDEL;HRUN=1",Indel,0.002248
899,18s,T,A,436,PASS,"DP=282467;AF=0.003604;SB=13;DP4=133573,146824,517,501",Substitution,0.003604
899,18s,T,C,171,PASS,"DP=282467;AF=0.003076;SB=4;DP4=133573,146824,401,468",Substitution,0.003076
900,18s,C,T,1782,PASS,"DP=282227;AF=0.005492;SB=0;DP4=133451,146019,735,815",Substitution,0.005492
901,18s,G,A,1673,PASS,"DP=282952;AF=0.007323;SB=5;DP4=134604,145226,972,1100",Substitution,0.007323
907,18s,G,A,483,PASS,"DP=284671;AF=0.003130;SB=7;DP4=136568,146962,408,483",Substitution,0.00313
914,18s,T,G,2348,PASS,"DP=285572;AF=0.007266;SB=4;DP4=136035,147042,976,1103",Substitution,0.007266
915,18s,G,T,768,PASS,"DP=286234;AF=0.003951;SB=21;DP4=136898,148109,498,633",Substitution,0.003951
923,18s,G,A,2402,PASS,"DP=288704;AF=0.005424;SB=9;DP4=137289,149482,719,847",Substitution,0.005424
927,18s,C,T,1031,PASS,"DP=288244;AF=0.004059;SB=0;DP4=137275,149332,558,612",Substitution,0.004059
928,18s,G,A,4425,PASS,"DP=288422;AF=0.006393;SB=7;DP4=138084,148187,859,985",Substitution,0.006393
930,18s,C,G,16054,PASS,"DP=287642;AF=0.011758;SB=60;DP4=137828,146199,1497,1885",Substitution,0.011758
931,18s,C,CG,6548,PASS,"DP=286150;AF=0.002118;SB=0;DP4=139761,147774,297,309;INDEL;HRUN=5",Indel,0.002118
931,18s,C,T,16542,PASS,"DP=288146;AF=0.012407;SB=24;DP4=138243,145947,1651,1924",Substitution,0.012407
941,18s,C,T,638,PASS,"DP=289241;AF=0.003499;SB=3;DP4=138645,149260,500,512",Substitution,0.003499
942,18s,G,A,12107,PASS,"DP=289179;AF=0.010917;SB=2;DP4=137614,148093,1537,1620",Substitution,0.010917
948,18s,C,T,6702,PASS,"DP=286001;AF=0.007437;SB=7;DP4=133207,150364,969,1158",Substitution,0.007437
949,18s,G,A,23270,PASS,"DP=285428;AF=0.014448;SB=9;DP4=131466,149540,1980,2144",Substitution,0.014448
951,18s,C,T,739,PASS,"DP=284767;AF=0.003796;SB=12;DP4=132159,151196,472,609",Substitution,0.003796
952,18s,G,A,4757,PASS,"DP=285196;AF=0.006350;SB=4;DP4=131476,150922,825,986",Substitution,0.00635
952,18s,G,T,49314,PASS,"DP=285196;AF=0.003208;SB=1;DP4=131476,150922,421,494",Substitution,0.003208
956,18s,G,C,158,PASS,"DP=286849;AF=0.002374;SB=6;DP4=132606,153338,299,382",Substitution,0.002374
972,18s,A,G,5140,PASS,"DP=282002;AF=0.007422;SB=8;DP4=126375,153161,911,1182",Substitution,0.007422
974,18s,C,T,14282,PASS,"DP=280204;AF=0.012045;SB=1;DP4=124587,151929,1532,1843",Substitution,0.012045
977,18s,C,A,720,PASS,"DP=277590;AF=0.003498;SB=5;DP4=124028,152386,418,553",Substitution,0.003498
978,18s,G,A,5885,PASS,"DP=277641;AF=0.007041;SB=13;DP4=124063,150780,926,1029",Substitution,0.007041
981,18s,A,G,34917,PASS,"DP=277276;AF=0.023500;SB=8;DP4=120974,148405,2866,3650",Substitution,0.0235
982,18s,G,T,49314,PASS,"DP=277484;AF=0.026816;SB=6;DP4=121171,148789,3284,4157",Substitution,0.026816
983,18s,A,T,49314,PASS,"DP=277129;AF=0.027067;SB=24;DP4=120874,148294,3241,4260",Substitution,0.027067
984,18s,C,T,3626,PASS,"DP=277627;AF=0.006138;SB=15;DP4=123080,152028,807,897",Substitution,0.006138
985,18s,G,A,2058,PASS,"DP=277201;AF=0.005173;SB=1;DP4=123511,151402,639,795",Substitution,0.005173
990,18s,A,G,7918,PASS,"DP=277946;AF=0.008944;SB=3;DP4=123853,151032,1106,1394",Substitution,0.008944
994,18s,C,T,49314,PASS,"DP=275681;AF=0.024376;SB=2;DP4=121622,147034,3019,3701",Substitution,0.024376
1008,18s,A,G,422,PASS,"DP=275270;AF=0.004334;SB=0;DP4=131703,141870,584,620",Substitution,0.004334
1025,18s,T,C,2877,PASS,"DP=277757;AF=0.006275;SB=27;DP4=137256,138384,802,941",Substitution,0.006275
1032,18s,C,T,8049,PASS,"DP=275575;AF=0.009159;SB=14;DP4=137780,134985,1328,1196",Substitution,0.009159
1033,18s,G,A,3263,PASS,"DP=275842;AF=0.006460;SB=14;DP4=139755,133888,865,917",Substitution,0.00646
1038,18s,T,C,3093,PASS,"DP=274988;AF=0.006509;SB=19;DP4=139707,133098,863,927",Substitution,0.006509
1040,18s,G,A,976,PASS,"DP=275142;AF=0.004216;SB=2;DP4=141287,132376,589,571",Substitution,0.004216
1047,18s,C,T,127,PASS,"DP=273973;AF=0.002595;SB=3;DP4=141529,131491,379,332",Substitution,0.002595
1053,18s,C,T,4711,PASS,"DP=275438;AF=0.007098;SB=1;DP4=141748,131449,1023,932",Substitution,0.007098
1054,18s,G,A,388,PASS,"DP=275885;AF=0.003280;SB=20;DP4=142726,131772,510,395",Substitution,0.00328
1064,18s,C,A,14063,PASS,"DP=277583;AF=0.012209;SB=0;DP4=141447,132654,1743,1646",Substitution,0.012209
1065,18s,G,A,2513,PASS,"DP=277600;AF=0.005602;SB=25;DP4=142869,132888,747,808",Substitution,0.005602
1067,18s,C,G,8637,PASS,"DP=277572;AF=0.008855;SB=1;DP4=141867,131293,1266,1192",Substitution,0.008855
1067,18s,C,T,49314,PASS,"DP=277572;AF=0.006279;SB=8;DP4=141867,131293,936,807",Substitution,0.006279
1068,18s,G,A,196,PASS,"DP=276710;AF=0.002978;SB=5;DP4=144119,131456,446,378",Substitution,0.002978
1071,18s,G,A,3058,PASS,"DP=276751;AF=0.005648;SB=1;DP4=144383,130541,827,736",Substitution,0.005648
1074,18s,C,T,333,PASS,"DP=277267;AF=0.003073;SB=0;DP4=145142,130944,451,401",Substitution,0.003073
1075,18s,C,T,417,PASS,"DP=277644;AF=0.003512;SB=9;DP4=145397,130920,487,488",Substitution,0.003512
1076,18s,G,C,188,PASS,"DP=278303;AF=0.002670;SB=4;DP4=146273,131029,405,338",Substitution,0.00267
1085,18s,C,A,4058,PASS,"DP=278171;AF=0.006769;SB=1;DP4=144318,131890,975,908",Substitution,0.006769
1092,18s,G,A,23828,PASS,"DP=276927;AF=0.014834;SB=4;DP4=144035,128571,2142,1966",Substitution,0.014834
1095,18s,C,T,49314,PASS,"DP=276845;AF=0.036374;SB=8;DP4=140988,125508,5254,4816",Substitution,0.036374
1098,18s,C,T,750,PASS,"DP=275703;AF=0.003206;SB=2;DP4=146401,128151,462,422",Substitution,0.003206
1099,18s,G,A,1825,PASS,"DP=275916;AF=0.004516;SB=8;DP4=146924,127540,641,605",Substitution,0.004516
1103,18s,C,T,49314,PASS,"DP=273160;AF=0.034321;SB=5;DP4=140695,122813,4953,4422",Substitution,0.034321
1104,18s,G,GT,3340,PASS,"DP=270515;AF=0.001493;SB=24;DP4=145263,127059,186,218;INDEL;HRUN=2",Indel,0.001493
1106,18s,C,T,1886,PASS,"DP=272469;AF=0.004474;SB=1;DP4=144544,126484,642,577",Substitution,0.004474
1107,18s,G,A,6348,PASS,"DP=272346;AF=0.007843;SB=0;DP4=144580,125391,1145,991",Substitution,0.007843
1109,18s,C,CAGT,3047,PASS,"DP=270993;AF=0.001447;SB=27;DP4=146432,126036,180,212;INDEL;HRUN=1",Indel,0.001447
1109,18s,C,T,8910,PASS,"DP=272861;AF=0.008854;SB=11;DP4=145245,124921,1253,1163",Substitution,0.008854
1110,18s,G,A,122,PASS,"DP=272899;AF=0.002620;SB=1;DP4=146661,125310,381,334",Substitution,0.00262
1116,18s,C,T,707,PASS,"DP=274652;AF=0.003867;SB=23;DP4=146705,126383,524,538",Substitution,0.003867
1122,18s,A,AC,25879,PASS,"DP=274821;AF=0.005669;SB=5;DP4=146744,127639,854,704;INDEL;HRUN=3",Indel,0.005669
1126,18s,G,A,994,PASS,"DP=276841;AF=0.003854;SB=3;DP4=146811,128567,556,511",Substitution,0.003854
1128,18s,C,T,49314,PASS,"DP=276319;AF=0.033852;SB=13;DP4=142175,124515,4890,4464",Substitution,0.033852
1129,18s,G,A,130,PASS,"DP=276471;AF=0.002771;SB=0;DP4=146881,128543,411,355",Substitution,0.002771
1140,18s,G,A,49314,PASS,"DP=274698;AF=0.030117;SB=10;DP4=139796,126142,4269,4004",Substitution,0.030117
1141,18s,G,A,49314,PASS,"DP=275107;AF=0.030465;SB=13;DP4=140111,126235,4313,4068",Substitution,0.030465
1147,18s,CAA,C,45609,PASS,"DP=270681;AF=0.009184;SB=8;DP4=140189,129726,1329,1157;INDEL;HRUN=3",Indel,0.009184
1147,18s,C,T,152,PASS,"DP=272402;AF=0.002860;SB=0;DP4=140940,130360,405,374",Substitution,0.00286
1153,18s,C,CTTTGGGTT,20735,PASS,"DP=268416;AF=0.004862;SB=3;DP4=137543,131108,653,652;INDEL;HRUN=3",Indel,0.004862
1157,18s,G,GGGTTTTTA,49314,PASS,"DP=265355;AF=0.014543;SB=10;DP4=133935,130014,1904,1955;INDEL;HRUN=3",Indel,0.014543
1158,18s,G,GGTTTTTCA,4921,PASS,"DP=265599;AF=0.001615;SB=2;DP4=135416,132023,223,206;INDEL;HRUN=3",Indel,0.001615
1161,18s,T,TTTTGGGTTC,5122,PASS,"DP=263623;AF=0.001737;SB=1;DP4=133898,132921,235,223;INDEL;HRUN=2",Indel,0.001737
1161,18s,T,TC,245,PASS,"DP=263623;AF=0.000239;SB=4;DP4=133898,132921,28,35;INDEL;HRUN=2",Indel,0.000239
1163,18s,C,T,75,PASS,"DP=266363;AF=0.003552;SB=4;DP4=132610,132368,459,487",Substitution,0.003552
1165,18s,G,A,7329,PASS,"DP=265784;AF=0.008646;SB=6;DP4=132145,131063,1184,1114",Substitution,0.008646
1166,18s,G,T,409,PASS,"DP=265701;AF=0.003406;SB=1;DP4=132661,132048,449,456",Substitution,0.003406
1191,18s,CTT,C,10822,PASS,"DP=252964;AF=0.003064;SB=1;DP4=125695,128138,390,385;INDEL;HRUN=2",Indel,0.003064
1203,18s,G,A,77,PASS,"DP=253005;AF=0.002739;SB=2;DP4=125085,126801,353,340",Substitution,0.002739
1204,18s,A,G,36407,PASS,"DP=252095;AF=0.024546;SB=0;DP4=121826,123494,3082,3107",Substitution,0.024546
1205,18s,C,T,42412,PASS,"DP=252205;AF=0.024440;SB=0;DP4=121994,123739,3070,3094",Substitution,0.02444
1206,18s,G,A,12802,PASS,"DP=254371;AF=0.012340;SB=11;DP4=124918,125925,1613,1526",Substitution,0.01234
1212,18s,GC,G,44223,PASS,"DP=251678;AF=0.009838;SB=1;DP4=124877,125833,1224,1252;INDEL;HRUN=1",Indel,0.009838
1216,18s,C,G,377,PASS,"DP=254267;AF=0.003083;SB=19;DP4=126143,127126,358,433",Substitution,0.003083
1218,18s,C,G,9832,PASS,"DP=254208;AF=0.010303;SB=2;DP4=124644,126742,1282,1338",Substitution,0.010303
1224,18s,G,GT,191,PASS,"DP=254778;AF=0.000208;SB=1;DP4=125775,130388,25,28;INDEL;HRUN=1",Indel,0.000208
1228,18s,A,C,11763,PASS,"DP=256535;AF=0.010139;SB=6;DP4=123900,129640,1312,1310",Substitution,0.010139
1233,18s,GC,G,24223,PASS,"DP=257083;AF=0.005827;SB=13;DP4=124766,132194,689,809;INDEL;HRUN=1",Indel,0.005827
1233,18s,G,A,10644,PASS,"DP=258458;AF=0.009472;SB=0;DP4=124154,131644,1189,1259",Substitution,0.009472
1234,18s,C,T,30462,PASS,"DP=259131;AF=0.018022;SB=1;DP4=122723,129905,2253,2417",Substitution,0.018022
1235,18s,G,A,3160,PASS,"DP=260796;AF=0.006377;SB=2;DP4=125663,133189,818,845",Substitution,0.006377
1236,18s,G,T,982,PASS,"DP=260676;AF=0.003717;SB=22;DP4=125900,133718,427,542",Substitution,0.003717
1254,18s,CG,C,182,PASS,"DP=261630;AF=0.000199;SB=2;DP4=126291,136839,27,25;INDEL;HRUN=3",Indel,0.000199
1254,18s,C,T,49314,PASS,"DP=263182;AF=0.028847;SB=3;DP4=122568,132759,3609,3983",Substitution,0.028847
1261,18s,C,A,49314,PASS,"DP=265500;AF=0.027021;SB=5;DP4=122213,136031,3441,3733",Substitution,0.027021
1262,18s,C,A,30916,PASS,"DP=266468;AF=0.017983;SB=13;DP4=123484,138108,2333,2459",Substitution,0.017983
1264,18s,C,T,406,PASS,"DP=268478;AF=0.002875;SB=12;DP4=126305,141196,338,434",Substitution,0.002875
1265,18s,ACCCGG,A,8711,PASS,"DP=267485;AF=0.002467;SB=2;DP4=126962,140825,305,355;INDEL;HRUN=3",Indel,0.002467
1265,18s,AC,A,4709,PASS,"DP=267485;AF=0.001551;SB=8;DP4=126962,140825,181,234;INDEL;HRUN=3",Indel,0.001551
1265,18s,A,C,94,PASS,"DP=268862;AF=0.004586;SB=354;DP4=126955,140362,368,865",Substitution,0.004586
1268,18s,C,T,97,PASS,"DP=269579;AF=0.003175;SB=2;DP4=127368,140430,416,440",Substitution,0.003175
1269,18s,G,A,7656,PASS,"DP=270305;AF=0.008668;SB=14;DP4=127677,139249,1070,1273",Substitution,0.008668
1270,18s,GC,G,31826,PASS,"DP=268653;AF=0.008915;SB=7;DP4=128128,139610,1180,1215;INDEL;HRUN=3",Indel,0.008915
1273,18s,C,T,2937,PASS,"DP=272306;AF=0.013518;SB=9;DP4=128649,138876,1721,1960",Substitution,0.013518
1274,18s,G,A,87,PASS,"DP=273062;AF=0.004750;SB=0;DP4=130744,140637,622,675",Substitution,0.00475
1279,18s,C,G,49314,PASS,"DP=276240;AF=0.009112;SB=5;DP4=128477,139984,1177,1340",Substitution,0.009112
1279,18s,C,T,26078,PASS,"DP=276240;AF=0.016706;SB=0;DP4=128477,139984,2200,2415",Substitution,0.016706
1280,18s,G,A,1219,PASS,"DP=276427;AF=0.004927;SB=9;DP4=132271,142387,627,735",Substitution,0.004927
1284,18s,A,C,1137,PASS,"DP=277727;AF=0.008462;SB=366;DP4=132916,141292,1487,931",Substitution,0.008462
1292,18s,CAGATTGAT,C,8475,PASS,"DP=273548;AF=0.002398;SB=1;DP4=135029,139278,318,338;INDEL;HRUN=1",Indel,0.002398
1292,18s,C,T,184,PASS,"DP=274967;AF=0.003146;SB=1;DP4=134802,139013,419,446",Substitution,0.003146
1293,18s,AGATT,A,208,PASS,"DP=273641;AF=0.000208;SB=5;DP4=135539,139706,24,33;INDEL;HRUN=1",Indel,0.000208
1302,18s,GCT,G,178,PASS,"DP=273231;AF=0.000198;SB=0;DP4=136455,138427,27,27;INDEL;HRUN=1",Indel,0.000198
1305,18s,C,G,6779,PASS,"DP=275860;AF=0.008961;SB=25;DP4=136223,136820,1158,1314",Substitution,0.008961
1306,18s,T,C,412,PASS,"DP=276132;AF=0.005106;SB=48;DP4=136865,136789,624,788",Substitution,0.005106
1312,18s,G,A,49314,PASS,"DP=277572;AF=0.007598;SB=12;DP4=137216,132866,1027,1082",Substitution,0.007598
1312,18s,G,T,31629,PASS,"DP=277572;AF=0.019145;SB=46;DP4=137216,132866,2544,2770",Substitution,0.019145
1313,18s,A,G,22207,PASS,"DP=277165;AF=0.018126;SB=33;DP4=138408,132866,2437,2587",Substitution,0.018126
1317,18s,C,T,1750,PASS,"DP=277518;AF=0.005920;SB=21;DP4=139838,135371,779,864",Substitution,0.00592
1318,18s,G,A,49314,PASS,"DP=277438;AF=0.031557;SB=77;DP4=137412,131022,4213,4542",Substitution,0.031557
1319,18s,T,C,229,PASS,"DP=277949;AF=0.004958;SB=13;DP4=140910,134941,671,715",Substitution,0.004958
1320,18s,G,A,115,PASS,"DP=277810;AF=0.002484;SB=3;DP4=141533,135357,342,348",Substitution,0.002484
1321,18s,G,A,2060,PASS,"DP=277412;AF=0.005212;SB=19;DP4=140907,134737,690,756",Substitution,0.005212
1322,18s,G,A,130,PASS,"DP=276889;AF=0.002759;SB=27;DP4=140979,134908,347,417",Substitution,0.002759
1324,18s,G,T,383,PASS,"DP=277003;AF=0.003112;SB=69;DP4=140214,135854,360,502",Substitution,0.003112
1335,18s,GCCGT,G,9148,PASS,"DP=272791;AF=0.002636;SB=26;DP4=136531,137701,317,402;INDEL;HRUN=2",Indel,0.002636
1336,18s,CCGTT,C,49314,PASS,"DP=272667;AF=0.028254;SB=40;DP4=132773,133767,3662,4042;INDEL;HRUN=2",Indel,0.028254
1338,18s,G,A,761,PASS,"DP=274490;AF=0.004510;SB=28;DP4=132410,131889,563,675",Substitution,0.00451
1341,18s,CTTAG,C,9179,PASS,"DP=274481;AF=0.002565;SB=7;DP4=137268,137646,333,371;INDEL;HRUN=2",Indel,0.002565
1341,18s,CTTAGTTGGTGGAGCGA,C,4131,PASS,"DP=274481;AF=0.001425;SB=23;DP4=137268,137646,167,224;INDEL;HRUN=2",Indel,0.001425
1349,18s,G,C,1639,PASS,"DP=275194;AF=0.005618;SB=1;DP4=135286,137225,761,785",Substitution,0.005618
1355,18s,C,T,49314,PASS,"DP=273338;AF=0.038085;SB=33;DP4=130664,131322,5010,5400",Substitution,0.038085
1356,18s,G,T,140,PASS,"DP=273197;AF=0.003627;SB=266;DP4=135825,135326,327,664",Substitution,0.003627
1366,18s,G,T,90,PASS,"DP=276463;AF=0.003758;SB=80;DP4=138273,137057,429,610",Substitution,0.003758
1374,18s,C,T,400,PASS,"DP=277899;AF=0.004307;SB=9;DP4=139668,136508,633,564",Substitution,0.004307
1375,18s,G,A,6540,PASS,"DP=278169;AF=0.009002;SB=0;DP4=140037,135006,1276,1228",Substitution,0.009002
1380,18s,C,T,1632,PASS,"DP=278313;AF=0.007147;SB=0;DP4=140887,133992,1017,972",Substitution,0.007147
1381,18s,G,A,49314,PASS,"DP=277998;AF=0.003853;SB=8;DP4=139774,130492,529,542",Substitution,0.003853
1381,18s,G,C,37518,PASS,"DP=277998;AF=0.022644;SB=46;DP4=139774,130492,3425,2870",Substitution,0.022644
1384,18s,C,T,2008,PASS,"DP=277641;AF=0.007279;SB=28;DP4=142822,131600,980,1041",Substitution,0.007279
1400,18s,T,C,3550,PASS,"DP=276630;AF=0.009095;SB=4;DP4=145490,127374,1317,1199",Substitution,0.009095
1403,18s,C,A,1580,PASS,"DP=276944;AF=0.006821;SB=549;DP4=146758,128207,1344,545",Substitution,0.006821
1405,18s,A,T,147,PASS,"DP=275553;AF=0.003763;SB=436;DP4=146970,126224,334,703",Substitution,0.003763
1406,18s,G,A,850,PASS,"DP=275414;AF=0.006953;SB=1;DP4=146244,126334,1018,897",Substitution,0.006953
1410,18s,C,T,8713,PASS,"DP=272881;AF=0.013482;SB=3;DP4=144426,122896,1965,1714",Substitution,0.013482
1412,18s,C,T,28660,PASS,"DP=271761;AF=0.016735;SB=12;DP4=145973,120980,2421,2127",Substitution,0.016735
1415,18s,C,A,534,PASS,"DP=272990;AF=0.003996;SB=16;DP4=149084,122559,636,455",Substitution,0.003996
1417,18s,C,T,134,PASS,"DP=274521;AF=0.002958;SB=13;DP4=150367,123044,417,395",Substitution,0.002958
1418,18s,C,A,1796,PASS,"DP=274803;AF=0.004836;SB=2;DP4=149988,122645,719,610",Substitution,0.004836
1418,18s,C,T,173,PASS,"DP=274803;AF=0.002791;SB=2;DP4=149988,122645,413,354",Substitution,0.002791
1419,18s,C,A,49314,PASS,"DP=274111;AF=0.002824;SB=6;DP4=148079,121067,409,365",Substitution,0.002824
1419,18s,C,G,49314,PASS,"DP=274111;AF=0.002860;SB=4;DP4=148079,121067,421,368",Substitution,0.00286
1419,18s,C,T,15866,PASS,"DP=274111;AF=0.012272;SB=14;DP4=148079,121067,1791,1573",Substitution,0.012272
1420,18s,G,A,3808,PASS,"DP=274736;AF=0.007767;SB=1;DP4=147692,122058,1161,973",Substitution,0.007767
1423,18s,CG,C,3174,PASS,"DP=271547;AF=0.001171;SB=1;DP4=150299,123676,170,148;INDEL;HRUN=2",Indel,0.001171
1423,18s,C,T,13386,PASS,"DP=274293;AF=0.011222;SB=5;DP4=148569,122175,1658,1420",Substitution,0.011222
1424,18s,G,A,260,PASS,"DP=274063;AF=0.003970;SB=8;DP4=149947,122249,574,514",Substitution,0.00397
1427,18s,C,T,556,PASS,"DP=273438;AF=0.003610;SB=23;DP4=149658,122530,498,489",Substitution,0.00361
1428,18s,G,A,5989,PASS,"DP=272068;AF=0.007928;SB=13;DP4=149630,119997,1151,1006",Substitution,0.007928
1430,18s,C,T,2077,PASS,"DP=272016;AF=0.004570;SB=15;DP4=150539,120032,653,590",Substitution,0.00457
1431,18s,G,A,17562,PASS,"DP=272143;AF=0.013441;SB=9;DP4=150217,118012,2000,1658",Substitution,0.013441
1437,18s,C,A,244,PASS,"DP=274961;AF=0.002757;SB=11;DP4=152348,121777,397,361",Substitution,0.002757
1449,18s,G,T,193,PASS,"DP=276860;AF=0.003435;SB=42;DP4=150675,124906,582,369",Substitution,0.003435
1453,18s,C,T,2902,PASS,"DP=277037;AF=0.005826;SB=3;DP4=149676,125500,864,750",Substitution,0.005826
1455,18s,AGTGGC,A,173,PASS,"DP=275756;AF=0.000192;SB=14;DP4=150461,126954,21,32;INDEL;HRUN=1",Indel,0.000192
1461,18s,G,A,15488,PASS,"DP=278605;AF=0.012581;SB=0;DP4=146009,126375,1873,1632",Substitution,0.012581
1461,18s,G,C,49314,PASS,"DP=278605;AF=0.009128;SB=3;DP4=146009,126375,1345,1199",Substitution,0.009128
1463,18s,T,G,519,PASS,"DP=277364;AF=0.003948;SB=18;DP4=146364,129653,622,473",Substitution,0.003948
1464,18s,C,T,783,PASS,"DP=277190;AF=0.003564;SB=1;DP4=146252,129623,529,459",Substitution,0.003564
1467,18s,C,T,544,PASS,"DP=277373;AF=0.003021;SB=4;DP4=146053,130243,430,408",Substitution,0.003021
1470,18s,C,T,3654,PASS,"DP=277742;AF=0.006146;SB=0;DP4=145104,130687,896,811",Substitution,0.006146
1472,18s,C,G,12635,PASS,"DP=278699;AF=0.011181;SB=1;DP4=143178,128713,1664,1480",Substitution,0.011181
1472,18s,C,T,15027,PASS,"DP=278699;AF=0.012225;SB=2;DP4=143178,128713,1811,1596",Substitution,0.012225
1474,18s,A,G,277,PASS,"DP=279923;AF=0.003087;SB=3;DP4=147622,131008,470,394",Substitution,0.003087
1475,18s,G,A,40628,PASS,"DP=280709;AF=0.019935;SB=1;DP4=145645,129219,2954,2642",Substitution,0.019935
1482,18s,C,T,3369,PASS,"DP=283141;AF=0.005248;SB=5;DP4=149964,131235,815,671",Substitution,0.005248
1490,18s,G,A,110,PASS,"DP=285292;AF=0.002948;SB=3;DP4=149340,134591,454,387",Substitution,0.002948
1491,18s,G,A,6537,PASS,"DP=284965;AF=0.009001;SB=6;DP4=148162,133899,1378,1187",Substitution,0.009001
1507,18s,G,A,10334,PASS,"DP=285647;AF=0.009071;SB=2;DP4=147002,135772,1361,1230",Substitution,0.009071
1512,18s,C,A,16479,PASS,"DP=284418;AF=0.011993;SB=32;DP4=145727,135185,1871,1540",Substitution,0.011993
1514,18s,G,A,14083,PASS,"DP=284862;AF=0.011156;SB=0;DP4=146091,135356,1648,1530",Substitution,0.011156
1517,18s,G,A,11146,PASS,"DP=284421;AF=0.009173;SB=9;DP4=145502,136117,1389,1220",Substitution,0.009173
1523,18s,C,T,2290,PASS,"DP=284501;AF=0.005054;SB=3;DP4=144576,138266,751,687",Substitution,0.005054
1524,18s,G,A,364,PASS,"DP=283798;AF=0.002829;SB=8;DP4=144426,138350,432,371",Substitution,0.002829
1525,18s,C,T,46266,PASS,"DP=283070;AF=0.021581;SB=48;DP4=140605,136140,3276,2833",Substitution,0.021581
1527,18s,C,T,121,PASS,"DP=282605;AF=0.002243;SB=18;DP4=143332,138421,354,280",Substitution,0.002243
1528,18s,G,A,14797,PASS,"DP=282294;AF=0.011169;SB=12;DP4=142183,136740,1662,1491",Substitution,0.011169
1529,18s,C,T,117,PASS,"DP=282913;AF=0.002358;SB=10;DP4=143631,138323,362,305",Substitution,0.002358
1532,18s,CACTG,C,8054,PASS,"DP=281332;AF=0.002225;SB=27;DP4=142288,139831,355,271;INDEL;HRUN=1",Indel,0.002225
1547,18s,C,T,1829,PASS,"DP=279736;AF=0.004286;SB=5;DP4=135790,142498,604,595",Substitution,0.004286
1548,18s,G,A,3696,PASS,"DP=280077;AF=0.006023;SB=97;DP4=135904,142291,956,731",Substitution,0.006023
1550,18s,G,A,4031,PASS,"DP=279338;AF=0.005846;SB=96;DP4=134620,142902,921,712",Substitution,0.005846
1559,18s,C,A,999,PASS,"DP=280934;AF=0.003613;SB=44;DP4=132794,147019,548,467",Substitution,0.003613
1562,18s,CG,C,195,PASS,"DP=273190;AF=0.001592;SB=35;DP4=131022,145914,244,191;INDEL;HRUN=1",Indel,0.001592
1562,18s,C,T,24890,PASS,"DP=277371;AF=0.015906;SB=70;DP4=128880,143833,2265,2147",Substitution,0.015906
1563,18s,GC,G,49314,PASS,"DP=272443;AF=0.021538;SB=117;DP4=126368,142591,3030,2838;INDEL;HRUN=2",Indel,0.021538
1565,18s,C,T,6278,PASS,"DP=274170;AF=0.025838;SB=162;DP4=125296,141601,3682,3402",Substitution,0.025838
1571,18s,G,A,49314,PASS,"DP=270693;AF=0.023621;SB=172;DP4=122372,141737,3312,3082",Substitution,0.023621
1572,18s,C,G,26291,PASS,"DP=271031;AF=0.015670;SB=98;DP4=122670,141975,2179,2068",Substitution,0.01567
1572,18s,C,T,49314,PASS,"DP=271031;AF=0.007309;SB=46;DP4=122670,141975,1013,968",Substitution,0.007309
1574,18s,C,T,7595,PASS,"DP=270926;AF=0.008098;SB=80;DP4=124276,144218,1151,1043",Substitution,0.008098
1583,18s,C,T,49314,PASS,"DP=267204;AF=0.031927;SB=217;DP4=117048,141338,4321,4210",Substitution,0.031927
1584,18s,G,A,134,PASS,"DP=266365;AF=0.002868;SB=38;DP4=120587,144336,401,363",Substitution,0.002868
1591,18s,C,A,2733,PASS,"DP=266950;AF=0.005716;SB=82;DP4=120670,144667,808,718",Substitution,0.005716
1592,18s,C,T,13571,PASS,"DP=267589;AF=0.011914;SB=75;DP4=119871,144244,1605,1583",Substitution,0.011914
1597,18s,C,G,19162,PASS,"DP=268523;AF=0.013630;SB=136;DP4=119106,144720,1885,1775",Substitution,0.01363
1597,18s,C,T,49314,PASS,"DP=268523;AF=0.002979;SB=37;DP4=119106,144720,415,385",Substitution,0.002979
1599,18s,T,C,1661,PASS,"DP=269435;AF=0.006198;SB=41;DP4=121588,145649,849,837",Substitution,0.006198
1605,18s,G,T,16317,PASS,"DP=267503;AF=0.012897;SB=76;DP4=120705,143253,1743,1707",Substitution,0.012897
1609,18s,C,G,47089,PASS,"DP=267309;AF=0.023288;SB=182;DP4=120041,140104,3228,2997",Substitution,0.023288
1609,18s,C,T,49314,PASS,"DP=267309;AF=0.002918;SB=7;DP4=120041,140104,378,402",Substitution,0.002918
1610,18s,G,A,911,PASS,"DP=266471;AF=0.003997;SB=38;DP4=123567,141631,559,506",Substitution,0.003997
1620,18s,A,G,219,PASS,"DP=263764;AF=0.005823;SB=104;DP4=123069,138175,854,682",Substitution,0.005823
1623,18s,A,T,1694,PASS,"DP=262583;AF=0.009224;SB=9;DP4=122813,136713,1186,1236",Substitution,0.009224
1634,18s,A,C,638,PASS,"DP=261927;AF=0.011293;SB=1977;DP4=122262,136274,2207,752",Substitution,0.011293
1635,18s,C,G,32428,PASS,"DP=261434;AF=0.020621;SB=216;DP4=120479,132821,2928,2469",Substitution,0.020621
1635,18s,C,T,49314,PASS,"DP=261434;AF=0.009704;SB=66;DP4=120479,132821,1338,1199",Substitution,0.009704
1639,18s,G,C,100,PASS,"DP=260624;AF=0.002928;SB=29;DP4=125787,133659,415,348",Substitution,0.002928
1644,18s,C,T,36745,PASS,"DP=261818;AF=0.020235;SB=144;DP4=123824,132484,2849,2449",Substitution,0.020235
1652,18s,G,A,270,PASS,"DP=267225;AF=0.003099;SB=12;DP4=127356,138807,424,404",Substitution,0.003099
1654,18s,G,T,4675,PASS,"DP=266220;AF=0.006048;SB=73;DP4=126103,138450,878,732",Substitution,0.006048
1655,18s,C,T,25542,PASS,"DP=266518;AF=0.016303;SB=113;DP4=124447,137341,2296,2049",Substitution,0.016303
1656,18s,G,T,4410,PASS,"DP=266652;AF=0.007005;SB=30;DP4=125709,138530,961,907",Substitution,0.007005
1664,18s,A,G,1194,PASS,"DP=269521;AF=0.005513;SB=80;DP4=126169,140678,814,672",Substitution,0.005513
1669,18s,G,A,2255,PASS,"DP=270374;AF=0.007682;SB=140;DP4=126298,141764,1156,921",Substitution,0.007682
1670,18s,CGTTG,C,30028,PASS,"DP=268638;AF=0.020381;SB=210;DP4=125029,140465,2937,2538;INDEL;HRUN=1",Indel,0.020381
1671,18s,GTTGA,G,41494,PASS,"DP=269392;AF=0.008909;SB=32;DP4=126950,141872,1218,1182;INDEL;HRUN=2",Indel,0.008909
1677,18s,T,G,14489,PASS,"DP=274459;AF=0.027982;SB=182;DP4=124461,142056,3982,3698",Substitution,0.027982
1686,18s,G,A,446,PASS,"DP=280012;AF=0.002707;SB=22;DP4=130116,148870,392,366",Substitution,0.002707
1687,18s,C,T,1866,PASS,"DP=280483;AF=0.004425;SB=0;DP4=130214,148772,578,663",Substitution,0.004425
1689,18s,C,A,333,PASS,"DP=282658;AF=0.004111;SB=2;DP4=131099,149702,532,630",Substitution,0.004111
1691,18s,T,A,13304,PASS,"DP=284386;AF=0.019790;SB=256;DP4=128006,148411,3009,2619",Substitution,0.01979
1691,18s,T,G,49314,PASS,"DP=284386;AF=0.007718;SB=832;DP4=128006,148411,1470,725",Substitution,0.007718
1695,18s,A,AC,6118,PASS,"DP=284836;AF=0.001829;SB=5;DP4=132799,152828,255,266;INDEL;HRUN=1",Indel,0.001829
1700,18s,C,T,181,PASS,"DP=288240;AF=0.002932;SB=26;DP4=133002,154166,436,409",Substitution,0.002932
1701,18s,C,T,44389,PASS,"DP=288192;AF=0.022450;SB=153;DP4=129987,150978,3324,3147",Substitution,0.02245
1702,18s,GC,G,9358,PASS,"DP=286954;AF=0.002509;SB=3;DP4=134302,153569,347,373;INDEL;HRUN=3",Indel,0.002509
1704,18s,C,A,123,PASS,"DP=289481;AF=0.005396;SB=15;DP4=134420,153303,773,789",Substitution,0.005396
1705,18s,C,A,9153,PASS,"DP=290402;AF=0.010568;SB=29;DP4=133190,152555,1522,1547",Substitution,0.010568
1705,18s,C,G,49314,PASS,"DP=290402;AF=0.005279;SB=0;DP4=133190,152555,713,825",Substitution,0.005279
1708,18s,C,T,1903,PASS,"DP=292291;AF=0.004574;SB=5;DP4=135577,155165,643,694",Substitution,0.004574
1709,18s,G,A,49314,PASS,"DP=292497;AF=0.005309;SB=34;DP4=134654,153582,797,756",Substitution,0.005309
1709,18s,G,T,9815,PASS,"DP=292497;AF=0.009002;SB=43;DP4=134654,153582,1336,1297",Substitution,0.009002
1715,18s,A,C,2410,PASS,"DP=294948;AF=0.011019;SB=92;DP4=136113,155283,1696,1555",Substitution,0.011019
1717,18s,C,T,49314,PASS,"DP=295556;AF=0.033608;SB=269;DP4=132892,152287,5181,4752",Substitution,0.033608
1720,18s,T,G,1817,PASS,"DP=296852;AF=0.018632;SB=2147483647;DP4=134148,156812,4427,1149",Substitution,0.018632
1721,18s,T,A,10407,PASS,"DP=297668;AF=0.020694;SB=399;DP4=134511,154634,3395,2765",Substitution,0.020694
1726,18s,G,A,171,PASS,"DP=298045;AF=0.002872;SB=9;DP4=137687,159186,421,435",Substitution,0.002872
1738,18s,C,T,3384,PASS,"DP=297934;AF=0.005501;SB=78;DP4=134260,161702,859,780",Substitution,0.005501
1742,18s,C,T,8838,PASS,"DP=298271;AF=0.009227;SB=193;DP4=134509,160643,1496,1256",Substitution,0.009227
1743,18s,G,T,658,PASS,"DP=298174;AF=0.003877;SB=9;DP4=135866,160347,504,652",Substitution,0.003877
1747,18s,C,G,15332,PASS,"DP=296910;AF=0.012058;SB=201;DP4=133877,159236,1917,1663",Substitution,0.012058
1748,18s,G,A,17759,PASS,"DP=296530;AF=0.012498;SB=1;DP4=134174,158371,1712,1994",Substitution,0.012498
1752,18s,CCG,C,2336,PASS,"DP=294964;AF=0.002471;SB=3;DP4=134224,160890,321,408;INDEL;HRUN=4",Indel,0.002471
1754,18s,GC,G,365,PASS,"DP=294580;AF=0.002359;SB=1;DP4=134740,160662,312,383;INDEL;HRUN=2",Indel,0.002359
1754,18s,G,T,545,PASS,"DP=296097;AF=0.002972;SB=22;DP4=134250,160040,360,520",Substitution,0.002972
1756,18s,CG,C,49314,PASS,"DP=293457;AF=0.025523;SB=166;DP4=131217,157215,3779,3711;INDEL;HRUN=4",Indel,0.025523
1763,18s,G,A,49314,PASS,"DP=289610;AF=0.032675;SB=202;DP4=125726,154144,4715,4748",Substitution,0.032675
1770,18s,G,T,49314,PASS,"DP=286719;AF=0.034849;SB=230;DP4=122949,153515,4954,5038",Substitution,0.034849
1777,18s,G,T,1157,PASS,"DP=281520;AF=0.004692;SB=163;DP4=124017,155998,738,583",Substitution,0.004692
1778,18s,C,T,12225,PASS,"DP=280855;AF=0.010938;SB=34;DP4=122726,154443,1459,1613",Substitution,0.010938
1779,18s,G,A,13107,PASS,"DP=279658;AF=0.011443;SB=260;DP4=122066,153430,1722,1478",Substitution,0.011443
1782,18s,G,A,16120,PASS,"DP=276841;AF=0.012849;SB=3;DP4=120611,152291,1596,1961",Substitution,0.012849
1784,18s,G,A,31359,PASS,"DP=274500;AF=0.017931;SB=179;DP4=119138,150091,2489,2433",Substitution,0.017931
1791,18s,A,C,229,PASS,"DP=269352;AF=0.008045;SB=2529;DP4=115848,149524,2063,655",Substitution,0.008045
1795,18s,G,A,49314,PASS,"DP=264760;AF=0.037627;SB=231;DP4=112455,141838,4916,5046",Substitution,0.037627
1797,18s,T,G,7684,PASS,"DP=262756;AF=0.014458;SB=928;DP4=114236,144061,2318,1486",Substitution,0.014458
1798,18s,C,T,187,PASS,"DP=262269;AF=0.003172;SB=49;DP4=116584,144591,435,397",Substitution,0.003172
1799,18s,G,A,6292,PASS,"DP=260502;AF=0.010161;SB=78;DP4=115876,141150,1340,1307",Substitution,0.010161
1804,18s,TGAC,T,106,PASS,"DP=256658;AF=0.000160;SB=2;DP4=117624,141516,21,20;INDEL;HRUN=1",Indel,0.00016
1805,18s,GACT,G,850,PASS,"DP=255400;AF=0.000505;SB=3;DP4=117357,140421,63,66;INDEL;HRUN=1",Indel,0.000505
1806,18s,ACTAT,A,5381,PASS,"DP=255140;AF=0.001795;SB=1;DP4=116761,139682,212,246;INDEL;HRUN=1",Indel,0.001795
1828,18s,C,T,65,PASS,"DP=236044;AF=0.003385;SB=7;DP4=111797,123050,399,400",Substitution,0.003385
1829,18s,G,C,4713,PASS,"DP=234584;AF=0.010806;SB=71;DP4=110725,120462,1353,1186",Substitution,0.010806
1834,18s,AAG,A,7870,PASS,"DP=228027;AF=0.002640;SB=1;DP4=111398,118429,287,315;INDEL;HRUN=2",Indel,0.00264
1836,18s,G,A,49314,PASS,"DP=228070;AF=0.032135;SB=70;DP4=106455,113285,3784,3545",Substitution,0.032135
1841,18s,C,T,110,PASS,"DP=221429;AF=0.003310;SB=0;DP4=107822,112539,356,377",Substitution,0.00331
1842,18s,C,A,49314,PASS,"DP=219337;AF=0.008188;SB=106;DP4=103367,107955,1021,775",Substitution,0.008188
1842,18s,C,G,25938,PASS,"DP=219337;AF=0.022304;SB=1;DP4=103367,107955,2437,2514",Substitution,0.022304
1842,18s,C,T,49314,PASS,"DP=219337;AF=0.005681;SB=16;DP4=103367,107955,650,596",Substitution,0.005681
1856,18s,C,T,7626,PASS,"DP=189913;AF=0.011474;SB=1;DP4=93435,93969,1096,1083",Substitution,0.011474
1857,18s,G,T,5521,PASS,"DP=187886;AF=0.009394;SB=15;DP4=93044,92973,929,836",Substitution,0.009394
1860,18s,A,G,20942,PASS,"DP=180657;AF=0.034247;SB=34;DP4=85336,86428,3217,2971",Substitution,0.034247
53,28s,CGGA,C,166,PASS,"DP=204554;AF=0.000533;SB=4;DP4=128238,77565,73,36;INDEL;HRUN=2",Indel,0.000533
148,28s,C,A,2655,PASS,"DP=188733;AF=0.007990;SB=286;DP4=118344,68722,738,770",Substitution,0.00799
149,28s,A,C,565,PASS,"DP=189508;AF=0.021677;SB=46;DP4=116754,68170,2493,1668",Substitution,0.021677
169,28s,G,A,5778,PASS,"DP=188543;AF=0.010067;SB=251;DP4=111768,74381,911,987",Substitution,0.010067
175,28s,C,T,769,PASS,"DP=188937;AF=0.004255;SB=47;DP4=111104,76849,415,389",Substitution,0.004255
178,28s,C,T,146,PASS,"DP=187903;AF=0.002570;SB=45;DP4=109657,77597,237,246",Substitution,0.00257
180,28s,C,A,189,PASS,"DP=187051;AF=0.003058;SB=38;DP4=108263,78059,287,285",Substitution,0.003058
181,28s,C,T,254,PASS,"DP=187119;AF=0.003516;SB=33;DP4=107504,78733,335,323",Substitution,0.003516
182,28s,G,A,339,PASS,"DP=187216;AF=0.003851;SB=15;DP4=107204,78901,386,335",Substitution,0.003851
185,28s,C,T,257,PASS,"DP=186732;AF=0.003792;SB=53;DP4=105424,80208,341,367",Substitution,0.003792
186,28s,G,A,1385,PASS,"DP=186410;AF=0.006341;SB=38;DP4=104966,79992,605,577",Substitution,0.006341
187,28s,TG,T,68,PASS,"DP=184661;AF=0.000509;SB=1;DP4=105343,81029,55,39;INDEL;HRUN=6",Indel,0.000509
197,28s,A,C,105,PASS,"DP=186541;AF=0.010990;SB=508;DP4=99151,84523,765,1288",Substitution,0.01099
198,28s,A,C,215,PASS,"DP=185904;AF=0.008720;SB=1670;DP4=98244,83171,1129,2492",Substitution,0.00872
201,28s,CCTT,C,286,PASS,"DP=184063;AF=0.000445;SB=5;DP4=97473,87394,38,44;INDEL;HRUN=2",Indel,0.000445
203,28s,T,G,361,PASS,"DP=185856;AF=0.009879;SB=10;DP4=94408,87321,1767,1541",Substitution,0.009879
210,28s,C,T,4597,PASS,"DP=184635;AF=0.010090;SB=18;DP4=92283,89963,889,974",Substitution,0.01009
215,28s,C,CCCAG,1857,PASS,"DP=183264;AF=0.002586;SB=5;DP4=91183,92628,247,227;INDEL;HRUN=3",Indel,0.002586
223,28s,G,A,117,PASS,"DP=185196;AF=0.004044;SB=10;DP4=87414,96543,332,417",Substitution,0.004044
224,28s,T,G,738,PASS,"DP=185653;AF=0.017630;SB=2528;DP4=85114,96577,2542,806",Substitution,0.01763
231,28s,T,G,866,PASS,"DP=186637;AF=0.018941;SB=2788;DP4=81851,100542,2643,894",Substitution,0.018941
239,28s,C,T,1105,PASS,"DP=188415;AF=0.006714;SB=4;DP4=80464,106326,527,738",Substitution,0.006714
242,28s,T,G,878,PASS,"DP=188749;AF=0.019322;SB=251;DP4=78337,106494,1866,1783",Substitution,0.019322
245,28s,C,T,82,PASS,"DP=189225;AF=0.003181;SB=5;DP4=79082,108842,240,362",Substitution,0.003181
252,28s,C,T,692,PASS,"DP=194030;AF=0.004288;SB=12;DP4=79595,113406,371,461",Substitution,0.004288
253,28s,G,C,321,PASS,"DP=194581;AF=0.006758;SB=2432;DP4=78577,113787,1252,262",Substitution,0.006758
255,28s,CG,C,237,PASS,"DP=194489;AF=0.001275;SB=31;DP4=80052,115505,128,120;INDEL;HRUN=1",Indel,0.001275
257,28s,C,T,2071,PASS,"DP=199128;AF=0.006955;SB=6;DP4=80712,116805,588,797",Substitution,0.006955
261,28s,G,A,196,PASS,"DP=203000;AF=0.004764;SB=14;DP4=81473,119535,424,543",Substitution,0.004764
266,28s,C,T,1031,PASS,"DP=208186;AF=0.004856;SB=24;DP4=83334,123612,453,558",Substitution,0.004856
272,28s,T,G,147,PASS,"DP=211326;AF=0.013874;SB=307;DP4=81122,124832,1185,2723",Substitution,0.013874
276,28s,C,A,1127,PASS,"DP=214815;AF=0.004944;SB=445;DP4=83202,129614,644,418",Substitution,0.004944
276,28s,C,T,493,PASS,"DP=214815;AF=0.003976;SB=3;DP4=83202,129614,344,510",Substitution,0.003976
277,28s,G,A,608,PASS,"DP=215256;AF=0.005960;SB=21;DP4=82242,130073,545,738",Substitution,0.00596
282,28s,C,T,1765,PASS,"DP=217280;AF=0.007189;SB=6;DP4=83016,132168,625,937",Substitution,0.007189
286,28s,T,G,713,PASS,"DP=218747;AF=0.015557;SB=804;DP4=81469,132916,1849,1557",Substitution,0.015557
291,28s,T,G,70,PASS,"DP=221163;AF=0.007189;SB=2422;DP4=82536,136732,1251,339",Substitution,0.007189
302,28s,C,A,4654,PASS,"DP=222503;AF=0.008171;SB=38;DP4=81916,138650,755,1063",Substitution,0.008171
304,28s,C,G,173,PASS,"DP=223930;AF=0.003631;SB=13;DP4=83310,138995,338,490",Substitution,0.003631
305,28s,A,C,300,PASS,"DP=224768;AF=0.008809;SB=2147483647;DP4=82781,139615,1677,303",Substitution,0.008809
309,28s,C,A,221,PASS,"DP=226358;AF=0.003521;SB=109;DP4=84460,139806,395,402",Substitution,0.003521
309,28s,C,T,1156,PASS,"DP=226358;AF=0.005089;SB=51;DP4=84460,139806,509,643",Substitution,0.005089
319,28s,ACTC,A,11367,PASS,"DP=224314;AF=0.003660;SB=31;DP4=85769,139035,361,460;INDEL;HRUN=1",Indel,0.00366
325,28s,T,A,124,PASS,"DP=226401;AF=0.007672;SB=1943;DP4=85403,138492,1277,460",Substitution,0.007672
326,28s,C,T,799,PASS,"DP=227047;AF=0.006104;SB=393;DP4=86189,138743,776,610",Substitution,0.006104
329,28s,A,T,162,PASS,"DP=228524;AF=0.005501;SB=167;DP4=87531,137788,638,619",Substitution,0.005501
340,28s,C,T,801,PASS,"DP=228701;AF=0.004766;SB=6;DP4=90227,137066,453,637",Substitution,0.004766
342,28s,G,GCT,824,PASS,"DP=227087;AF=0.001647;SB=14;DP4=90957,137132,169,205;INDEL;HRUN=1",Indel,0.001647
349,28s,AC,A,830,PASS,"DP=230012;AF=0.001630;SB=9;DP4=93874,136990,168,207;INDEL;HRUN=2",Indel,0.00163
352,28s,G,A,4775,PASS,"DP=231861;AF=0.009894;SB=53;DP4=93991,134866,1051,1243",Substitution,0.009894
357,28s,TCAA,T,10674,PASS,"DP=232281;AF=0.003255;SB=31;DP4=96714,136188,360,396;INDEL;HRUN=1",Indel,0.003255
368,28s,C,T,110,PASS,"DP=235091;AF=0.003943;SB=31;DP4=100296,133478,449,478",Substitution,0.003943
369,28s,G,A,71,PASS,"DP=235610;AF=0.004189;SB=8;DP4=101242,132838,449,538",Substitution,0.004189
371,28s,A,G,89,PASS,"DP=235848;AF=0.008052;SB=12;DP4=101664,130659,872,1027",Substitution,0.008052
377,28s,A,C,387,PASS,"DP=235710;AF=0.010602;SB=830;DP4=103951,128856,1601,898",Substitution,0.010602
395,28s,AAG,A,16890,PASS,"DP=237542;AF=0.006411;SB=33;DP4=116040,121933,812,711;INDEL;HRUN=2",Indel,0.006411
396,28s,AGAG,A,207,PASS,"DP=237881;AF=0.000240;SB=1;DP4=116971,122323,26,31;INDEL;HRUN=1",Indel,0.00024
422,28s,CG,C,219,PASS,"DP=234174;AF=0.000239;SB=4;DP4=125023,111512,26,30;INDEL;HRUN=1",Indel,0.000239
423,28s,G,A,305,PASS,"DP=235663;AF=0.004010;SB=27;DP4=124646,109681,551,394",Substitution,0.00401
425,28s,TAA,T,115,PASS,"DP=234418;AF=0.000166;SB=0;DP4=126202,109778,20,19;INDEL;HRUN=2",Indel,0.000166
428,28s,GA,G,160,PASS,"DP=234046;AF=0.000197;SB=7;DP4=127012,108709,20,26;INDEL;HRUN=1",Indel,0.000197
434,28s,A,C,74,PASS,"DP=233351;AF=0.006891;SB=542;DP4=126352,105098,565,1043",Substitution,0.006891
436,28s,C,T,1764,PASS,"DP=233280;AF=0.005504;SB=27;DP4=126744,104993,758,526",Substitution,0.005504
441,28s,G,C,353,PASS,"DP=232361;AF=0.003013;SB=15;DP4=127970,103548,418,285",Substitution,0.003013
442,28s,G,A,160,PASS,"DP=232043;AF=0.002956;SB=16;DP4=127856,103298,409,277",Substitution,0.002956
456,28s,C,T,681,PASS,"DP=230030;AF=0.003899;SB=32;DP4=128188,100696,554,343",Substitution,0.003899
458,28s,CCCGGAGGATTCAA,C,3663,PASS,"DP=228185;AF=0.001455;SB=2;DP4=129472,99805,193,139;INDEL;HRUN=3",Indel,0.001455
459,28s,C,T,563,PASS,"DP=229925;AF=0.003840;SB=25;DP4=129075,99376,543,340",Substitution,0.00384
461,28s,G,A,642,PASS,"DP=229340;AF=0.003911;SB=25;DP4=129360,98481,554,343",Substitution,0.003911
474,28s,C,T,1126,PASS,"DP=226562;AF=0.004524;SB=24;DP4=126201,99105,621,404",Substitution,0.004524
476,28s,GCGGCGGGTCCGGCCGTGTCGGCGGCC,G,1297,PASS,"DP=223126;AF=0.000722;SB=497;DP4=126157,98576,4,157;INDEL;HRUN=1",Indel,0.000722
477,28s,C,T,3801,PASS,"DP=224139;AF=0.006585;SB=188;DP4=124684,97537,999,477",Substitution,0.006585
484,28s,T,G,108,PASS,"DP=217280;AF=0.006545;SB=613;DP4=120493,94545,1179,363",Substitution,0.006545
492,28s,T,G,617,PASS,"DP=214785;AF=0.015159;SB=9;DP4=116967,92070,1787,1487",Substitution,0.015159
494,28s,T,G,1177,PASS,"DP=213756;AF=0.012613;SB=2104;DP4=117351,92832,2278,437",Substitution,0.012613
498,28s,C,T,606,PASS,"DP=210806;AF=0.004231;SB=14;DP4=117745,91329,533,359",Substitution,0.004231
506,28s,C,T,277,PASS,"DP=207965;AF=0.004342;SB=0;DP4=117218,88793,512,391",Substitution,0.004342
513,28s,T,G,1404,PASS,"DP=205873;AF=0.018341;SB=1420;DP4=113714,87065,1355,2425",Substitution,0.018341
518,28s,G,C,147,PASS,"DP=204071;AF=0.004244;SB=1;DP4=114332,88703,492,374",Substitution,0.004244
521,28s,C,T,138,PASS,"DP=202887;AF=0.003312;SB=4;DP4=112816,89165,388,284",Substitution,0.003312
523,28s,C,A,1751,PASS,"DP=202227;AF=0.006191;SB=13;DP4=112121,88726,734,518",Substitution,0.006191
524,28s,C,A,125,PASS,"DP=202564;AF=0.004369;SB=1;DP4=112236,88497,499,386",Substitution,0.004369
526,28s,T,G,3812,PASS,"DP=201645;AF=0.033167;SB=1908;DP4=109105,84808,2594,4211",Substitution,0.033167
536,28s,C,A,193,PASS,"DP=197208;AF=0.004417;SB=23;DP4=109336,86843,528,343",Substitution,0.004417
540,28s,T,A,152,PASS,"DP=194760;AF=0.016513;SB=322;DP4=105931,77826,1513,1703",Substitution,0.016513
544,28s,C,A,256,PASS,"DP=192990;AF=0.004384;SB=50;DP4=106448,85587,533,313",Substitution,0.004384
547,28s,G,C,963,PASS,"DP=191254;AF=0.009119;SB=213;DP4=104859,84509,763,981",Substitution,0.009119
551,28s,T,G,1404,PASS,"DP=191556;AF=0.022745;SB=2147483647;DP4=101966,78349,809,4235",Substitution,0.022745
554,28s,CT,C,10545,PASS,"DP=189188;AF=0.004720;SB=492;DP4=103770,85893,268,625;INDEL;HRUN=2",Indel,0.00472
555,28s,TTC,T,1403,PASS,"DP=188069;AF=0.001648;SB=273;DP4=103658,86297,74,236;INDEL;HRUN=2",Indel,0.001648
555,28s,T,G,1104,PASS,"DP=190268;AF=0.021228;SB=1184;DP4=98855,81839,2407,3670",Substitution,0.021228
562,28s,G,GA,237,PASS,"DP=184609;AF=0.001598;SB=259;DP4=100925,84745,70,225;INDEL;HRUN=2",Indel,0.001598
562,28s,G,C,5124,PASS,"DP=185969;AF=0.018777;SB=1734;DP4=99830,82089,1085,2409",Substitution,0.018777
565,28s,G,C,1834,PASS,"DP=185318;AF=0.011456;SB=383;DP4=99472,83081,854,1269",Substitution,0.011456
567,28s,CCCT,C,49314,PASS,"DP=183142;AF=0.019695;SB=11;DP4=98244,82679,1903,1704;INDEL;HRUN=4",Indel,0.019695
570,28s,T,A,49314,PASS,"DP=183383;AF=0.024904;SB=13;DP4=92691,70885,2519,2048",Substitution,0.024904
600,28s,GGCGGGT,G,308,PASS,"DP=169361;AF=0.000396;SB=0;DP4=90462,80324,37,30;INDEL;HRUN=2",Indel,0.000396
606,28s,T,G,23414,PASS,"DP=169439;AF=0.077910;SB=2147483647;DP4=84725,71007,3667,9543",Substitution,0.07791
607,28s,GCGGGGGTGGGCGGGCGGGGC,G,572,PASS,"DP=167439;AF=0.000567;SB=0;DP4=87774,80992,48,47;INDEL;HRUN=1",Indel,0.000567
610,28s,GGGGT,G,864,PASS,"DP=167518;AF=0.000740;SB=4;DP4=86123,82634,69,55;INDEL;HRUN=5",Indel,0.00074
634,28s,T,G,4184,PASS,"DP=170214;AF=0.029281;SB=1;DP4=77178,87521,2355,2644",Substitution,0.029281
639,28s,T,G,3522,PASS,"DP=168388;AF=0.025263;SB=1728;DP4=74193,89278,2859,1407",Substitution,0.025263
643,28s,C,T,49314,PASS,"DP=167329;AF=0.009592;SB=4;DP4=75151,87867,720,885",Substitution,0.009592
649,28s,A,C,1555,PASS,"DP=166847;AF=0.019815;SB=2147483647;DP4=70212,91753,2655,652",Substitution,0.019815
653,28s,T,G,1298,PASS,"DP=166270;AF=0.022067;SB=298;DP4=70786,89315,1995,1718",Substitution,0.022067
659,28s,G,C,294,PASS,"DP=166159;AF=0.006097;SB=923;DP4=70848,94104,757,256",Substitution,0.006097
660,28s,A,C,4166,PASS,"DP=166158;AF=0.025849;SB=1440;DP4=70041,91060,1052,3247",Substitution,0.025849
667,28s,A,C,2134,PASS,"DP=167331;AF=0.019512;SB=2;DP4=69327,93984,1402,1864",Substitution,0.019512
687,28s,T,G,777,PASS,"DP=169429;AF=0.017801;SB=2147483647;DP4=66966,98182,2526,722",Substitution,0.017801
688,28s,T,G,3432,PASS,"DP=169641;AF=0.027658;SB=123;DP4=67389,97053,2174,2522",Substitution,0.027658
692,28s,A,C,2887,PASS,"DP=170685;AF=0.026171;SB=2913;DP4=68490,96969,707,3765",Substitution,0.026171
702,28s,T,G,3039,PASS,"DP=171848;AF=0.027414;SB=224;DP4=67388,99320,1571,3145",Substitution,0.027414
709,28s,C,T,230,PASS,"DP=171953;AF=0.003937;SB=51;DP4=68640,102346,330,347",Substitution,0.003937
711,28s,A,C,1481,PASS,"DP=172627;AF=0.017911;SB=834;DP4=68209,100492,734,2361",Substitution,0.017911
713,28s,C,T,311,PASS,"DP=173049;AF=0.003999;SB=54;DP4=68918,103138,338,354",Substitution,0.003999
719,28s,C,T,543,PASS,"DP=172163;AF=0.004821;SB=38;DP4=68076,102815,385,445",Substitution,0.004821
723,28s,A,C,268,PASS,"DP=172450;AF=0.010635;SB=1505;DP4=66644,103137,1288,564",Substitution,0.010635
731,28s,G,A,296,PASS,"DP=174424;AF=0.004300;SB=63;DP4=67221,106106,359,391",Substitution,0.0043
733,28s,A,C,1745,PASS,"DP=174646;AF=0.015746;SB=570;DP4=64692,104234,2333,2331",Substitution,0.015746
741,28s,C,CG,501,PASS,"DP=174932;AF=0.000532;SB=1;DP4=67115,108864,33,60;INDEL;HRUN=4",Indel,0.000532
742,28s,G,A,445,PASS,"DP=176414;AF=0.004376;SB=73;DP4=67011,108452,370,402",Substitution,0.004376
746,28s,A,C,107,PASS,"DP=176548;AF=0.010433;SB=1851;DP4=64784,108741,1310,538",Substitution,0.010433
747,28s,A,C,5241,PASS,"DP=176467;AF=0.029926;SB=2147483647;DP4=61359,104488,4853,3017",Substitution,0.029926
750,28s,T,G,2761,PASS,"DP=175987;AF=0.024542;SB=963;DP4=64667,106658,981,3339",Substitution,0.024542
755,28s,CG,C,115,PASS,"DP=174103;AF=0.000609;SB=0;DP4=65418,109721,38,68;INDEL;HRUN=6",Indel,0.000609
762,28s,CCCCG,C,907,PASS,"DP=173269;AF=0.000970;SB=4;DP4=65117,108956,69,99;INDEL;HRUN=4",Indel,0.00097
763,28s,C,CCGT,312,PASS,"DP=173458;AF=0.000530;SB=0;DP4=64942,108649,34,58;INDEL;HRUN=4",Indel,0.00053
763,28s,C,CCCGT,10202,PASS,"DP=173458;AF=0.004047;SB=25;DP4=64942,108649,302,400;INDEL;HRUN=4",Indel,0.004047
763,28s,CCCGTCCGT,C,43156,PASS,"DP=173458;AF=0.012810;SB=3;DP4=58442,98137,848,1374;INDEL;HRUN=4",Indel,0.01281
763,28s,CCCGT,C,49314,PASS,"DP=173458;AF=0.089970;SB=19;DP4=58442,98137,5988,9618;INDEL;HRUN=4",Indel,0.08997
777,28s,CGTCCG,C,148,PASS,"DP=175368;AF=0.000336;SB=7;DP4=67073,110027,17,42;INDEL;HRUN=1",Indel,0.000336
778,28s,GTCCGTCC,G,6338,PASS,"DP=175619;AF=0.002932;SB=4;DP4=66952,109278,186,329;INDEL;HRUN=1",Indel,0.002932
781,28s,CG,C,9583,PASS,"DP=175604;AF=0.014407;SB=17;DP4=66581,107930,907,1623;INDEL;HRUN=1",Indel,0.014407
782,28s,G,GTCC,6743,PASS,"DP=175881;AF=0.002985;SB=5;DP4=67570,108729,213,312;INDEL;HRUN=1",Indel,0.002985
782,28s,GTCCT,G,352,PASS,"DP=175881;AF=0.000847;SB=17;DP4=66299,106681,43,106;INDEL;HRUN=1",Indel,0.000847
782,28s,GTCC,G,49314,PASS,"DP=175881;AF=0.020895;SB=4;DP4=66299,106681,1438,2237;INDEL;HRUN=1",Indel,0.020895
785,28s,C,CG,49314,PASS,"DP=177137;AF=0.053919;SB=19;DP4=64534,103835,3786,5765;INDEL;HRUN=1",Indel,0.053919
790,28s,CCT,C,945,PASS,"DP=177904;AF=0.007847;SB=1;DP4=68222,109475,543,853;INDEL;HRUN=2",Indel,0.007847
792,28s,T,TC,49314,PASS,"DP=178079;AF=0.049736;SB=36;DP4=65211,105038,3567,5290;INDEL;HRUN=5",Indel,0.049736
804,28s,G,GC,16700,PASS,"DP=179000;AF=0.008872;SB=3;DP4=68314,110305,622,966;INDEL;HRUN=6",Indel,0.008872
804,28s,GC,G,73,PASS,"DP=179000;AF=0.000547;SB=1;DP4=68902,111209,35,63;INDEL;HRUN=6",Indel,0.000547
804,28s,G,C,552,PASS,"DP=180210;AF=0.006703;SB=570;DP4=68689,110079,208,1002",Substitution,0.006703
820,28s,T,G,394,PASS,"DP=182149;AF=0.021806;SB=4;DP4=67995,106747,1593,2422",Substitution,0.021806
823,28s,T,G,1893,PASS,"DP=183321;AF=0.026276;SB=2698;DP4=67936,105388,971,4649",Substitution,0.026276
827,28s,T,G,1566,PASS,"DP=182914;AF=0.028768;SB=23;DP4=64592,106290,3051,4694",Substitution,0.028768
835,28s,G,C,792,PASS,"DP=177933;AF=0.005266;SB=17;DP4=66001,110788,318,630",Substitution,0.005266
836,28s,C,G,876,PASS,"DP=177057;AF=0.008240;SB=771;DP4=65649,109757,222,1238",Substitution,0.00824
837,28s,G,A,213,PASS,"DP=176443;AF=0.003797;SB=37;DP4=65687,109732,299,371",Substitution,0.003797
844,28s,T,G,2044,PASS,"DP=175238;AF=0.025183;SB=57;DP4=63668,105684,1817,2600",Substitution,0.025183
847,28s,G,GGGC,8267,PASS,"DP=181144;AF=0.019415;SB=47;DP4=67487,110668,1208,2309;INDEL;HRUN=4",Indel,0.019415
847,28s,GGGC,G,49314,PASS,"DP=181144;AF=0.119264;SB=158;DP4=57220,92386,7634,13970;INDEL;HRUN=4",Indel,0.119264
847,28s,GGGCGGC,G,49314,PASS,"DP=181144;AF=0.049408;SB=25;DP4=57220,92386,3283,5667;INDEL;HRUN=4",Indel,0.049408
868,28s,T,C,49314,PASS,"DP=227928;AF=0.235596;SB=1633;DP4=58343,99114,23936,30864",Substitution,0.235596
895,28s,CG,C,49314,PASS,"DP=166344;AF=0.017728;SB=49;DP4=65288,99999,1047,1902;INDEL;HRUN=1",Indel,0.017728
897,28s,A,C,335,PASS,"DP=167884;AF=0.015463;SB=680;DP4=64697,99406,1480,1136",Substitution,0.015463
898,28s,A,C,3057,PASS,"DP=168090;AF=0.027402;SB=2963;DP4=63166,97996,3063,1544",Substitution,0.027402
899,28s,A,AC,1426,PASS,"DP=167115;AF=0.003195;SB=16;DP4=67459,99444,190,344;INDEL;HRUN=8",Indel,0.003195
899,28s,A,ACC,1990,PASS,"DP=167115;AF=0.003740;SB=30;DP4=67459,99444,212,413;INDEL;HRUN=8",Indel,0.00374
899,28s,AC,A,2401,PASS,"DP=167115;AF=0.004237;SB=1;DP4=67581,99776,282,426;INDEL;HRUN=8",Indel,0.004237
899,28s,A,C,744,PASS,"DP=168068;AF=0.023776;SB=2220;DP4=63480,98642,2576,1420",Substitution,0.023776
914,28s,T,G,1212,PASS,"DP=164625;AF=0.020240;SB=2147483647;DP4=67044,93077,2815,519",Substitution,0.02024
917,28s,A,C,127,PASS,"DP=163950;AF=0.016127;SB=2147483647;DP4=67346,91846,2480,790",Substitution,0.016127
918,28s,G,GC,2713,PASS,"DP=162128;AF=0.003263;SB=1;DP4=71097,91842,226,303;INDEL;HRUN=7",Indel,0.003263
918,28s,GC,G,49314,PASS,"DP=162128;AF=0.116396;SB=14;DP4=63223,81373,8101,10770;INDEL;HRUN=7",Indel,0.116396
925,28s,CG,C,73,PASS,"DP=162556;AF=0.000252;SB=111;DP4=73671,90443,39,2;INDEL;HRUN=2",Indel,0.000252
943,28s,A,C,286,PASS,"DP=160385;AF=0.014864;SB=975;DP4=74106,82357,1642,742",Substitution,0.014864
944,28s,A,C,2762,PASS,"DP=160496;AF=0.029365;SB=1155;DP4=72963,81256,3097,1745",Substitution,0.029365
945,28s,T,G,1782,PASS,"DP=160521;AF=0.020191;SB=44;DP4=74988,80945,1789,1674",Substitution,0.020191
960,28s,A,C,1487,PASS,"DP=155302;AF=0.018377;SB=2509;DP4=74977,75211,2727,766",Substitution,0.018377
964,28s,A,C,184,PASS,"DP=152933;AF=0.011247;SB=507;DP4=76408,72841,1564,779",Substitution,0.011247
966,28s,A,C,160,PASS,"DP=152606;AF=0.014554;SB=59;DP4=76417,72169,1027,1196",Substitution,0.014554
971,28s,T,G,3542,PASS,"DP=151851;AF=0.027889;SB=2417;DP4=75395,70983,3254,992",Substitution,0.027889
982,28s,T,G,259,PASS,"DP=149009;AF=0.011764;SB=1124;DP4=79576,65420,754,1625",Substitution,0.011764
989,28s,T,G,223,PASS,"DP=150610;AF=0.013173;SB=947;DP4=80039,65598,979,1802",Substitution,0.013173
995,28s,C,T,1849,PASS,"DP=148871;AF=0.006791;SB=3;DP4=80634,66862,565,447",Substitution,0.006791
1000,28s,ACCCCCGCGGGGAAT,A,878,PASS,"DP=148146;AF=0.000898;SB=0;DP4=82221,67018,74,59;INDEL;HRUN=5",Indel,0.000898
1000,28s,A,C,2559,PASS,"DP=149398;AF=0.027912;SB=111;DP4=79446,64866,2072,2099",Substitution,0.027912
1007,28s,C,G,539,PASS,"DP=147202;AF=0.005605;SB=1159;DP4=81672,64415,144,691",Substitution,0.005605
1012,28s,A,C,141,PASS,"DP=145811;AF=0.015013;SB=1441;DP4=77903,63544,1779,410",Substitution,0.015013
1013,28s,ATCCCCCGCGAGGGGGGTC,A,133,PASS,"DP=144591;AF=0.000256;SB=4;DP4=81420,64050,24,13;INDEL;HRUN=1",Indel,0.000256
1013,28s,A,C,16574,PASS,"DP=145518;AF=0.067497;SB=2147483647;DP4=72721,62218,8429,1528",Substitution,0.067497
1014,28s,TC,T,260,PASS,"DP=144569;AF=0.000443;SB=9;DP4=81589,63950,29,35;INDEL;HRUN=5",Indel,0.000443
1023,28s,AG,A,416,PASS,"DP=146179;AF=0.001033;SB=10;DP4=84062,62673,97,54;INDEL;HRUN=6",Indel,0.001033
1023,28s,A,C,167,PASS,"DP=146886;AF=0.019709;SB=15;DP4=79054,58973,2575,1795",Substitution,0.019709
1029,28s,G,T,8681,PASS,"DP=145082;AF=0.016625;SB=60;DP4=81950,60561,1266,1146",Substitution,0.016625
1030,28s,T,G,492,PASS,"DP=144586;AF=0.015838;SB=316;DP4=81386,59659,1600,692",Substitution,0.015838
1032,28s,T,G,92,PASS,"DP=144044;AF=0.010379;SB=2071;DP4=82344,58096,408,1387",Substitution,0.010379
1045,28s,C,G,69,PASS,"DP=141946;AF=0.003593;SB=135;DP4=81417,59890,377,133",Substitution,0.003593
1055,28s,T,G,1242,PASS,"DP=144042;AF=0.018196;SB=510;DP4=80786,59610,1891,738",Substitution,0.018196
1057,28s,T,G,102,PASS,"DP=144214;AF=0.010581;SB=725;DP4=81768,58794,849,1341",Substitution,0.010581
1063,28s,T,TG,9051,PASS,"DP=144151;AF=0.007464;SB=0;DP4=82070,61979,617,459;INDEL;HRUN=7",Indel,0.007464
1063,28s,T,G,591,PASS,"DP=145129;AF=0.022091;SB=38;DP4=80462,60145,1960,1275",Substitution,0.022091
1071,28s,C,G,246,PASS,"DP=143513;AF=0.005128;SB=347;DP4=80098,62574,575,161",Substitution,0.005128
1078,28s,A,C,2233,PASS,"DP=142323;AF=0.026299;SB=307;DP4=77591,60498,2462,1287",Substitution,0.026299
1083,28s,T,A,774,PASS,"DP=143339;AF=0.014762;SB=1201;DP4=77544,60523,1702,414",Substitution,0.014762
1087,28s,A,C,7638,PASS,"DP=144090;AF=0.046964;SB=2147483647;DP4=78493,57831,1736,5086",Substitution,0.046964
1095,28s,A,C,1452,PASS,"DP=144624;AF=0.024657;SB=1543;DP4=78506,60848,1214,2358",Substitution,0.024657
1098,28s,G,C,373,PASS,"DP=145282;AF=0.006690;SB=644;DP4=80943,63114,802,176",Substitution,0.00669
1100,28s,T,A,243,PASS,"DP=145629;AF=0.012113;SB=46;DP4=78152,61326,899,865",Substitution,0.012113
1102,28s,T,G,138,PASS,"DP=146158;AF=0.012945;SB=803;DP4=80604,60266,1094,1705",Substitution,0.012945
1106,28s,A,C,5402,PASS,"DP=146577;AF=0.034098;SB=2147483647;DP4=81395,59739,1189,3816",Substitution,0.034098
1111,28s,T,A,3123,PASS,"DP=148324;AF=0.029071;SB=2421;DP4=78697,59615,3499,813",Substitution,0.029071
1114,28s,T,A,496,PASS,"DP=149015;AF=0.023172;SB=2086;DP4=79951,58084,2857,596",Substitution,0.023172
1114,28s,T,G,1723,PASS,"DP=149015;AF=0.027970;SB=2147483647;DP4=79951,58084,1332,4009",Substitution,0.02797
1119,28s,G,C,10930,PASS,"DP=151272;AF=0.025299;SB=3063;DP4=82323,64962,3243,595",Substitution,0.025299
1121,28s,G,GC,8647,PASS,"DP=151317;AF=0.004454;SB=0;DP4=86231,65371,380,294;INDEL;HRUN=5",Indel,0.004454
1121,28s,G,C,1399,PASS,"DP=152279;AF=0.010126;SB=48;DP4=85594,64962,965,582",Substitution,0.010126
1134,28s,C,G,311,PASS,"DP=155661;AF=0.005339;SB=139;DP4=88791,65893,367,467",Substitution,0.005339
1136,28s,A,C,8832,PASS,"DP=156164;AF=0.050319;SB=32;DP4=82303,62129,4899,3418",Substitution,0.050319
1137,28s,C,CG,3199,PASS,"DP=156067;AF=0.005017;SB=8;DP4=89755,66681,428,355;INDEL;HRUN=8",Indel,0.005017
1137,28s,CG,C,1004,PASS,"DP=156067;AF=0.002806;SB=2;DP4=89944,66851,245,193;INDEL;HRUN=8",Indel,0.002806
1137,28s,C,G,478,PASS,"DP=157233;AF=0.011741;SB=1985;DP4=89512,65482,454,1461",Substitution,0.011741
1146,28s,T,G,13737,PASS,"DP=158819;AF=0.053400;SB=2147483647;DP4=83280,66144,6727,1756",Substitution,0.0534
1148,28s,C,G,5274,PASS,"DP=158510;AF=0.016460;SB=736;DP4=87962,67720,1928,682",Substitution,0.01646
1149,28s,CGCGCGCG,C,294,PASS,"DP=158796;AF=0.000397;SB=2;DP4=90168,69265,33,30;INDEL;HRUN=1",Indel,0.000397
1153,28s,C,G,239,PASS,"DP=162382;AF=0.005167;SB=84;DP4=91448,69883,395,453",Substitution,0.005167
1155,28s,C,G,1702,PASS,"DP=163259;AF=0.008343;SB=1682;DP4=92215,69408,279,1093",Substitution,0.008343
1159,28s,T,G,16705,PASS,"DP=163543;AF=0.051350;SB=2147483647;DP4=86170,68155,6687,1712",Substitution,0.05135
1160,28s,CG,C,281,PASS,"DP=162726;AF=0.000910;SB=11;DP4=93352,70294,73,75;INDEL;HRUN=6",Indel,0.00091
1160,28s,C,G,4439,PASS,"DP=163848;AF=0.017870;SB=45;DP4=91623,68977,1557,1371",Substitution,0.01787
1162,28s,G,T,2919,PASS,"DP=164444;AF=0.009450;SB=2;DP4=92410,70273,893,661",Substitution,0.00945
1164,28s,G,GC,920,PASS,"DP=163356;AF=0.001175;SB=5;DP4=93473,70694,117,75;INDEL;HRUN=6",Indel,0.001175
1167,28s,C,G,3101,PASS,"DP=164035;AF=0.011144;SB=185;DP4=92380,69703,850,979",Substitution,0.011144
1169,28s,G,GC,210,PASS,"DP=163366;AF=0.000490;SB=5;DP4=93985,70243,41,39;INDEL;HRUN=4",Indel,0.00049
1172,28s,C,G,1566,PASS,"DP=164044;AF=0.008443;SB=417;DP4=92103,70358,1032,354",Substitution,0.008443
1175,28s,A,C,102,PASS,"DP=164803;AF=0.015091;SB=634;DP4=89223,69848,1818,686",Substitution,0.015091
1177,28s,T,G,743,PASS,"DP=165954;AF=0.017921;SB=35;DP4=89831,68176,3579,2467",Substitution,0.017921
1179,28s,T,G,1087,PASS,"DP=166852;AF=0.019958;SB=1435;DP4=93922,67877,1192,2140",Substitution,0.019958
1184,28s,A,C,2724,PASS,"DP=168471;AF=0.023577;SB=248;DP4=91535,69737,3615,2060",Substitution,0.023577
1186,28s,T,G,1873,PASS,"DP=168234;AF=0.023444;SB=256;DP4=92905,70550,1969,2097",Substitution,0.023444
1197,28s,C,G,788,PASS,"DP=172744;AF=0.006073;SB=1414;DP4=98540,73050,200,849",Substitution,0.006073
1213,28s,G,A,6380,PASS,"DP=179840;AF=0.009564;SB=8;DP4=100796,77098,1005,715",Substitution,0.009564
1216,28s,C,CG,21859,PASS,"DP=181734;AF=0.007649;SB=6;DP4=103251,78184,814,576;INDEL;HRUN=5",Indel,0.007649
1216,28s,CG,C,106,PASS,"DP=181734;AF=0.000259;SB=1;DP4=104040,78738,25,22;INDEL;HRUN=5",Indel,0.000259
1225,28s,T,G,5073,PASS,"DP=186503;AF=0.029040;SB=1;DP4=103606,77198,3115,2303",Substitution,0.02904
1238,28s,A,ACG,863,PASS,"DP=189902;AF=0.000621;SB=11;DP4=109673,81188,58,60;INDEL;HRUN=1",Indel,0.000621
1238,28s,A,C,349,PASS,"DP=190980;AF=0.012148;SB=1420;DP4=107651,80454,1908,414",Substitution,0.012148
1255,28s,A,C,473,PASS,"DP=200320;AF=0.015415;SB=1085;DP4=111919,83103,2878,973",Substitution,0.015415
1257,28s,A,T,268,PASS,"DP=201853;AF=0.010191;SB=766;DP4=114522,83996,764,1293",Substitution,0.010191
1270,28s,A,T,90,PASS,"DP=204755;AF=0.004430;SB=1530;DP4=117326,85536,139,768",Substitution,0.00443
1271,28s,G,GC,11795,PASS,"DP=202629;AF=0.003884;SB=11;DP4=116760,86235,428,359;INDEL;HRUN=1",Indel,0.003884
1285,28s,T,G,71,PASS,"DP=204542;AF=0.007201;SB=0;DP4=116404,86270,844,631",Substitution,0.007201
1330,28s,A,C,98,PASS,"DP=215190;AF=0.006831;SB=2682;DP4=131215,81804,250,1220",Substitution,0.006831
1333,28s,A,C,570,PASS,"DP=216162;AF=0.011505;SB=2147483647;DP4=132453,80783,519,1970",Substitution,0.011505
1342,28s,AAC,A,120,PASS,"DP=216177;AF=0.000180;SB=2;DP4=134951,82894,26,13;INDEL;HRUN=2",Indel,0.00018
1350,28s,C,T,245,PASS,"DP=217902;AF=0.002923;SB=19;DP4=135350,81537,366,271",Substitution,0.002923
1357,28s,CGG,C,122,PASS,"DP=216690;AF=0.000231;SB=7;DP4=137085,81751,36,14;INDEL;HRUN=5",Indel,0.000231
1358,28s,G,A,1706,PASS,"DP=219024;AF=0.005260;SB=36;DP4=136941,80703,664,488",Substitution,0.00526
1366,28s,G,C,244,PASS,"DP=216865;AF=0.003145;SB=84;DP4=135519,80484,352,330",Substitution,0.003145
1372,28s,A,C,292,PASS,"DP=219627;AF=0.008000;SB=2863;DP4=137025,80485,362,1396",Substitution,0.008
1373,28s,A,C,74,PASS,"DP=220330;AF=0.004847;SB=2147483647;DP4=137222,80164,539,2138",Substitution,0.004847
1377,28s,G,A,384,PASS,"DP=220532;AF=0.003346;SB=39;DP4=138424,81120,414,324",Substitution,0.003346
1379,28s,C,T,1970,PASS,"DP=221791;AF=0.006285;SB=56;DP4=139001,80973,794,600",Substitution,0.006285
1380,28s,G,T,172,PASS,"DP=222022;AF=0.003153;SB=19;DP4=140116,81116,411,289",Substitution,0.003153
1384,28s,C,A,708,PASS,"DP=221832;AF=0.003584;SB=10;DP4=139711,81240,479,316",Substitution,0.003584
1388,28s,A,C,2510,PASS,"DP=222681;AF=0.026554;SB=504;DP4=135852,79735,4313,1648",Substitution,0.026554
1389,28s,T,G,456,PASS,"DP=223251;AF=0.019252;SB=1987;DP4=136771,81391,3767,756",Substitution,0.019252
1401,28s,C,G,697,PASS,"DP=220286;AF=0.003573;SB=23;DP4=136360,82969,450,337",Substitution,0.003573
1403,28s,G,A,166,PASS,"DP=220382;AF=0.003299;SB=15;DP4=136516,82907,423,304",Substitution,0.003299
1405,28s,C,T,2618,PASS,"DP=217783;AF=0.005643;SB=44;DP4=134874,81496,695,534",Substitution,0.005643
1407,28s,C,T,835,PASS,"DP=218413;AF=0.003699;SB=21;DP4=136217,81196,469,339",Substitution,0.003699
1408,28s,G,A,461,PASS,"DP=219402;AF=0.003396;SB=19;DP4=137217,81196,434,311",Substitution,0.003396
1412,28s,G,C,626,PASS,"DP=220421;AF=0.003661;SB=35;DP4=138122,81345,457,350",Substitution,0.003661
1414,28s,C,T,6530,PASS,"DP=221176;AF=0.009472;SB=73;DP4=138074,80761,1199,896",Substitution,0.009472
1418,28s,C,T,1799,PASS,"DP=221462;AF=0.005572;SB=54;DP4=138899,81102,699,535",Substitution,0.005572
1420,28s,A,AG,1324,PASS,"DP=222149;AF=0.000792;SB=1;DP4=140881,81889,108,68;INDEL;HRUN=2",Indel,0.000792
1447,28s,C,T,1408,PASS,"DP=224812;AF=0.004760;SB=51;DP4=135284,88269,575,495",Substitution,0.00476
1448,28s,G,C,921,PASS,"DP=224483;AF=0.003969;SB=27;DP4=135159,88241,493,398",Substitution,0.003969
1450,28s,C,T,478,PASS,"DP=224331;AF=0.003571;SB=42;DP4=134972,88297,428,373",Substitution,0.003571
1453,28s,G,C,684,PASS,"DP=224913;AF=0.004015;SB=85;DP4=134816,88867,479,466",Substitution,0.004015
1456,28s,C,T,723,PASS,"DP=225142;AF=0.003402;SB=32;DP4=133539,90560,409,357",Substitution,0.003402
1457,28s,G,A,849,PASS,"DP=225379;AF=0.003749;SB=38;DP4=133704,90601,449,396",Substitution,0.003749
1458,28s,C,T,1192,PASS,"DP=226924;AF=0.003777;SB=40;DP4=133702,92200,450,407",Substitution,0.003777
1464,28s,C,T,409,PASS,"DP=226946;AF=0.003309;SB=38;DP4=131198,94747,384,367",Substitution,0.003309
1466,28s,G,T,1926,PASS,"DP=226256;AF=0.005025;SB=63;DP4=130274,94740,573,564",Substitution,0.005025
1478,28s,C,CAGG,2897,PASS,"DP=228111;AF=0.001359;SB=44;DP4=128678,100792,137,173;INDEL;HRUN=1",Indel,0.001359
1478,28s,C,T,917,PASS,"DP=229782;AF=0.004108;SB=44;DP4=128266,100358,466,478",Substitution,0.004108
1485,28s,C,G,987,PASS,"DP=231381;AF=0.004374;SB=118;DP4=127402,102847,447,565",Substitution,0.004374
1487,28s,G,A,717,PASS,"DP=233324;AF=0.003999;SB=50;DP4=128316,103536,448,485",Substitution,0.003999
1521,28s,C,T,13503,PASS,"DP=237804;AF=0.012519;SB=193;DP4=123680,110845,1318,1659",Substitution,0.012519
1522,28s,G,A,959,PASS,"DP=238281;AF=0.004314;SB=49;DP4=125020,111698,472,556",Substitution,0.004314
1524,28s,A,C,504,PASS,"DP=239418;AF=0.009699;SB=1119;DP4=125905,110915,694,1628",Substitution,0.009699
1527,28s,A,G,3409,PASS,"DP=238432;AF=0.012037;SB=173;DP4=124490,109830,1291,1579",Substitution,0.012037
1537,28s,A,C,8945,PASS,"DP=238158;AF=0.019487;SB=1516;DP4=122685,110077,1567,3119",Substitution,0.019487
1551,28s,C,T,1746,PASS,"DP=240277;AF=0.004616;SB=39;DP4=124439,114219,513,596",Substitution,0.004616
1552,28s,G,A,23452,PASS,"DP=240063;AF=0.016312;SB=281;DP4=123915,112075,1705,2211",Substitution,0.016312
1553,28s,A,G,194,PASS,"DP=239881;AF=0.003543;SB=71;DP4=124845,113702,366,484",Substitution,0.003543
1555,28s,G,A,906,PASS,"DP=240901;AF=0.003504;SB=87;DP4=125270,114569,353,491",Substitution,0.003504
1557,28s,C,G,696,PASS,"DP=240228;AF=0.003597;SB=51;DP4=124449,114668,389,487",Substitution,0.003597
1564,28s,A,C,120,PASS,"DP=239309;AF=0.010426;SB=17;DP4=121808,114820,1343,1152",Substitution,0.010426
1565,28s,ACT,A,1892,PASS,"DP=236906;AF=0.001038;SB=35;DP4=122105,115889,155,91;INDEL;HRUN=1",Indel,0.001038
1567,28s,TC,T,2528,PASS,"DP=237409;AF=0.001255;SB=26;DP4=121587,117355,125,173;INDEL;HRUN=1",Indel,0.001255
1567,28s,T,G,833,PASS,"DP=239240;AF=0.004117;SB=113;DP4=120927,116703,422,628",Substitution,0.004117
1575,28s,A,G,1167,PASS,"DP=238518;AF=0.003941;SB=36;DP4=118843,118392,414,526",Substitution,0.003941
1580,28s,C,T,1934,PASS,"DP=239915;AF=0.005281;SB=59;DP4=118660,119757,544,723",Substitution,0.005281
1585,28s,C,T,3916,PASS,"DP=241205;AF=0.006343;SB=18;DP4=118853,120600,711,819",Substitution,0.006343
1586,28s,G,A,27678,PASS,"DP=241791;AF=0.018504;SB=204;DP4=118525,118571,1918,2556",Substitution,0.018504
1588,28s,T,C,350,PASS,"DP=242093;AF=0.003858;SB=161;DP4=119845,120900,338,596",Substitution,0.003858
1594,28s,C,T,28328,PASS,"DP=245304;AF=0.019135;SB=139;DP4=118621,121764,2049,2645",Substitution,0.019135
1605,28s,G,A,562,PASS,"DP=247509;AF=0.004008;SB=12;DP4=120152,126124,514,478",Substitution,0.004008
1608,28s,G,A,34635,PASS,"DP=247963;AF=0.020769;SB=240;DP4=119418,122350,2172,2978",Substitution,0.020769
1608,28s,G,T,49314,PASS,"DP=247963;AF=0.003912;SB=56;DP4=119418,122350,405,565",Substitution,0.003912
1610,28s,C,T,609,PASS,"DP=248945;AF=0.003394;SB=73;DP4=122227,125687,337,508",Substitution,0.003394
1611,28s,C,T,1464,PASS,"DP=249766;AF=0.004784;SB=48;DP4=122205,126131,513,682",Substitution,0.004784
1612,28s,G,A,29004,PASS,"DP=251184;AF=0.017708;SB=133;DP4=121935,124633,1946,2502",Substitution,0.017708
1614,28s,C,T,257,PASS,"DP=253063;AF=0.003469;SB=33;DP4=124453,127507,382,496",Substitution,0.003469
1621,28s,A,G,1712,PASS,"DP=255702;AF=0.015987;SB=237;DP4=122583,127180,1678,2410",Substitution,0.015987
1627,28s,GC,G,349,PASS,"DP=253163;AF=0.002785;SB=50;DP4=125515,129012,289,416;INDEL;HRUN=1",Indel,0.002785
1628,28s,C,T,1582,PASS,"DP=255048;AF=0.004642;SB=10;DP4=125019,127724,616,568",Substitution,0.004642
1629,28s,G,GTA,352,PASS,"DP=253748;AF=0.002778;SB=53;DP4=126636,128037,289,416;INDEL;HRUN=3",Indel,0.002778
1640,28s,C,T,36372,PASS,"DP=257220;AF=0.020519;SB=178;DP4=125055,126619,2300,2978",Substitution,0.020519
1641,28s,G,A,328,PASS,"DP=257524;AF=0.003363;SB=34;DP4=127208,128122,379,487",Substitution,0.003363
1641,28s,G,C,714,PASS,"DP=257524;AF=0.003988;SB=29;DP4=127208,128122,459,568",Substitution,0.003988
1651,28s,G,C,114,PASS,"DP=263514;AF=0.002618;SB=26;DP4=131243,131356,305,386",Substitution,0.002618
1666,28s,C,A,49314,PASS,"DP=265299;AF=0.003234;SB=55;DP4=128566,134045,351,507",Substitution,0.003234
1666,28s,C,T,3911,PASS,"DP=265299;AF=0.006638;SB=56;DP4=128566,134045,763,998",Substitution,0.006638
1667,28s,G,A,22823,PASS,"DP=265273;AF=0.015889;SB=148;DP4=128553,132188,1817,2398",Substitution,0.015889
1674,28s,C,T,338,PASS,"DP=262765;AF=0.003193;SB=25;DP4=127143,134494,364,475",Substitution,0.003193
1678,28s,C,A,49314,PASS,"DP=262483;AF=0.003513;SB=31;DP4=125680,134399,394,528",Substitution,0.003513
1678,28s,C,T,2451,PASS,"DP=262483;AF=0.005235;SB=54;DP4=125680,134399,578,796",Substitution,0.005235
1679,28s,A,G,14007,PASS,"DP=263132;AF=0.012416;SB=202;DP4=125455,133569,1325,1969",Substitution,0.012416
1681,28s,G,T,90,PASS,"DP=262808;AF=0.002793;SB=30;DP4=125899,135989,398,336",Substitution,0.002793
1685,28s,G,A,448,PASS,"DP=261626;AF=0.002851;SB=21;DP4=124847,135057,321,425",Substitution,0.002851
1685,28s,G,C,494,PASS,"DP=261626;AF=0.002920;SB=14;DP4=124847,135057,338,426",Substitution,0.00292
1686,28s,C,T,176,PASS,"DP=260795;AF=0.002343;SB=43;DP4=124826,135110,243,368",Substitution,0.002343
1687,28s,T,G,207,PASS,"DP=260857;AF=0.004052;SB=233;DP4=124778,134733,367,744",Substitution,0.004052
1690,28s,C,T,4590,PASS,"DP=258794;AF=0.006550;SB=6;DP4=122889,133979,786,909",Substitution,0.00655
1691,28s,G,A,9321,PASS,"DP=258729;AF=0.009172;SB=141;DP4=123163,132929,951,1422",Substitution,0.009172
1698,28s,C,CA,122,PASS,"DP=256540;AF=0.000698;SB=37;DP4=123720,133719,61,118;INDEL;HRUN=1",Indel,0.000698
1700,28s,G,A,784,PASS,"DP=255108;AF=0.004277;SB=18;DP4=122825,130884,488,603",Substitution,0.004277
1701,28s,ACCCGACGC,A,866,PASS,"DP=252887;AF=0.000645;SB=10;DP4=123188,131856,68,95;INDEL;HRUN=3",Indel,0.000645
1703,28s,CCGACG,C,532,PASS,"DP=252280;AF=0.001895;SB=0;DP4=121458,131790,231,247;INDEL;HRUN=3",Indel,0.001895
1707,28s,CGCACCCCCG,C,851,PASS,"DP=249790;AF=0.000717;SB=36;DP4=120977,131643,61,118;INDEL;HRUN=1",Indel,0.000717
1715,28s,C,CAT,822,PASS,"DP=250393;AF=0.000651;SB=9;DP4=121737,131163,68,95;INDEL;HRUN=1",Indel,0.000651
1716,28s,G,C,812,PASS,"DP=251754;AF=0.004353;SB=293;DP4=120878,129377,718,379",Substitution,0.004353
1721,28s,G,A,287,PASS,"DP=253315;AF=0.002996;SB=23;DP4=123229,128907,331,428",Substitution,0.002996
1724,28s,GTT,G,292,PASS,"DP=252701;AF=0.000696;SB=11;DP4=124829,129468,74,102;INDEL;HRUN=4",Indel,0.000696
1740,28s,C,T,424,PASS,"DP=252386;AF=0.003297;SB=141;DP4=125349,125867,303,529",Substitution,0.003297
1741,28s,G,T,417,PASS,"DP=252512;AF=0.003608;SB=219;DP4=126216,125232,310,601",Substitution,0.003608
1744,28s,TG,T,8749,PASS,"DP=251274;AF=0.002818;SB=182;DP4=127241,125246,239,469;INDEL;HRUN=1",Indel,0.002818
1751,28s,A,G,1673,PASS,"DP=255135;AF=0.005362;SB=18;DP4=127984,125187,737,631",Substitution,0.005362
1760,28s,G,T,547,PASS,"DP=250761;AF=0.004076;SB=1;DP4=126529,122364,513,509",Substitution,0.004076
1762,28s,C,T,1441,PASS,"DP=248897;AF=0.004403;SB=9;DP4=125576,121951,582,514",Substitution,0.004403
1764,28s,G,A,11460,PASS,"DP=248626;AF=0.011342;SB=39;DP4=125834,119638,1342,1478",Substitution,0.011342
1768,28s,C,T,4469,PASS,"DP=248360;AF=0.007566;SB=54;DP4=126900,119319,868,1011",Substitution,0.007566
1777,28s,C,T,1186,PASS,"DP=251109;AF=0.005312;SB=11;DP4=129926,119522,662,672",Substitution,0.005312
1785,28s,C,G,6371,PASS,"DP=249639;AF=0.009165;SB=8;DP4=128616,118366,1155,1133",Substitution,0.009165
1786,28s,A,T,84,PASS,"DP=249722;AF=0.006715;SB=4;DP4=128417,118638,854,823",Substitution,0.006715
1798,28s,G,T,520,PASS,"DP=247230;AF=0.004894;SB=16;DP4=128645,116706,594,616",Substitution,0.004894
1806,28s,G,GCTC,5262,PASS,"DP=244360;AF=0.001948;SB=10;DP4=129222,116633,231,245;INDEL;HRUN=3",Indel,0.001948
1807,28s,C,T,130,PASS,"DP=246096;AF=0.003576;SB=8;DP4=129079,115857,441,439",Substitution,0.003576
1809,28s,C,T,6640,PASS,"DP=246528;AF=0.009309;SB=10;DP4=129320,114492,1177,1119",Substitution,0.009309
1810,28s,G,A,1033,PASS,"DP=246508;AF=0.004389;SB=1;DP4=130448,114766,583,499",Substitution,0.004389
1814,28s,C,G,5121,PASS,"DP=246518;AF=0.007472;SB=52;DP4=129991,113549,885,957",Substitution,0.007472
1814,28s,C,T,49314,PASS,"DP=246518;AF=0.003923;SB=7;DP4=129991,113549,495,472",Substitution,0.003923
1816,28s,C,A,286,PASS,"DP=247712;AF=0.003339;SB=8;DP4=131959,114611,464,363",Substitution,0.003339
1819,28s,G,A,4485,PASS,"DP=247615;AF=0.006914;SB=9;DP4=130372,115290,875,837",Substitution,0.006914
1820,28s,C,CGT,567,PASS,"DP=246383;AF=0.000426;SB=2;DP4=131316,116590,59,46;INDEL;HRUN=1",Indel,0.000426
1821,28s,G,A,8697,PASS,"DP=248552;AF=0.010312;SB=8;DP4=130479,115302,1323,1240",Substitution,0.010312
1828,28s,C,T,10026,PASS,"DP=250586;AF=0.011098;SB=18;DP4=130410,116749,1403,1378",Substitution,0.011098
1829,28s,G,A,6433,PASS,"DP=250467;AF=0.008229;SB=0;DP4=130946,117240,1091,970",Substitution,0.008229
1832,28s,C,T,2060,PASS,"DP=250828;AF=0.005290;SB=6;DP4=131688,117265,680,647",Substitution,0.00529
1833,28s,G,A,180,PASS,"DP=251343;AF=0.003258;SB=0;DP4=132653,117581,434,385",Substitution,0.003258
1838,28s,A,C,813,PASS,"DP=254725;AF=0.019496;SB=3030;DP4=129822,119315,3887,1106",Substitution,0.019496
1840,28s,G,A,88,PASS,"DP=255207;AF=0.002422;SB=0;DP4=133565,120731,328,290",Substitution,0.002422
1841,28s,C,A,109,PASS,"DP=254664;AF=0.002482;SB=2;DP4=132597,120392,338,294",Substitution,0.002482
1841,28s,C,T,642,PASS,"DP=254664;AF=0.003487;SB=0;DP4=132597,120392,464,424",Substitution,0.003487
1842,28s,G,A,346,PASS,"DP=254619;AF=0.003460;SB=6;DP4=132911,120054,444,437",Substitution,0.00346
1846,28s,G,C,299,PASS,"DP=256595;AF=0.002697;SB=0;DP4=133693,122002,361,331",Substitution,0.002697
1848,28s,C,T,5144,PASS,"DP=257075;AF=0.009729;SB=5;DP4=132707,121303,1278,1223",Substitution,0.009729
1850,28s,A,C,483,PASS,"DP=257315;AF=0.013225;SB=838;DP4=130972,121304,2588,1242",Substitution,0.013225
1853,28s,G,A,5547,PASS,"DP=257801;AF=0.007564;SB=6;DP4=132682,122930,986,964",Substitution,0.007564
1857,28s,C,A,49314,PASS,"DP=258713;AF=0.004747;SB=33;DP4=132140,122744,575,653",Substitution,0.004747
1857,28s,C,T,7059,PASS,"DP=258713;AF=0.009713;SB=1;DP4=132140,122744,1292,1221",Substitution,0.009713
1870,28s,C,T,554,PASS,"DP=258754;AF=0.003451;SB=1;DP4=131095,126418,450,443",Substitution,0.003451
1878,28s,G,C,328,PASS,"DP=258713;AF=0.003104;SB=1;DP4=129541,128096,409,394",Substitution,0.003104
1879,28s,C,T,274,PASS,"DP=258556;AF=0.002912;SB=1;DP4=129368,128167,385,368",Substitution,0.002912
1880,28s,G,A,16066,PASS,"DP=259651;AF=0.012336;SB=2;DP4=128870,126907,1632,1572",Substitution,0.012336
1881,28s,C,T,343,PASS,"DP=259278;AF=0.003093;SB=0;DP4=130310,127864,408,394",Substitution,0.003093
1884,28s,C,T,19769,PASS,"DP=260142;AF=0.015076;SB=1;DP4=128945,126785,1989,1933",Substitution,0.015076
1894,28s,C,A,656,PASS,"DP=259328;AF=0.004057;SB=5;DP4=128156,129984,541,511",Substitution,0.004057
1895,28s,G,A,3782,PASS,"DP=259071;AF=0.006963;SB=3;DP4=127758,129098,915,889",Substitution,0.006963
1898,28s,C,T,15127,PASS,"DP=259592;AF=0.012604;SB=10;DP4=126593,129506,1667,1605",Substitution,0.012604
1902,28s,G,A,753,PASS,"DP=262288;AF=0.003912;SB=3;DP4=128907,132064,519,507",Substitution,0.003912
1903,28s,G,T,1226,PASS,"DP=262514;AF=0.004735;SB=35;DP4=128922,132239,549,694",Substitution,0.004735
1910,28s,G,A,3192,PASS,"DP=263568;AF=0.005805;SB=17;DP4=127128,134646,789,741",Substitution,0.005805
1911,28s,C,T,16235,PASS,"DP=263687;AF=0.012284;SB=26;DP4=126197,134022,1659,1580",Substitution,0.012284
1922,28s,G,A,5716,PASS,"DP=261321;AF=0.009238;SB=20;DP4=125152,133046,1234,1180",Substitution,0.009238
1924,28s,C,T,3965,PASS,"DP=262289;AF=0.008811;SB=19;DP4=126155,133633,1184,1127",Substitution,0.008811
1925,28s,G,A,944,PASS,"DP=261242;AF=0.004766;SB=7;DP4=126983,132752,633,612",Substitution,0.004766
1926,28s,C,A,479,PASS,"DP=262844;AF=0.003371;SB=7;DP4=128114,133784,413,473",Substitution,0.003371
1933,28s,G,C,733,PASS,"DP=263965;AF=0.003311;SB=4;DP4=128075,134836,440,434",Substitution,0.003311
1935,28s,C,T,3283,PASS,"DP=263951;AF=0.005781;SB=2;DP4=128206,134004,733,793",Substitution,0.005781
1937,28s,C,T,236,PASS,"DP=263984;AF=0.003375;SB=22;DP4=128597,134195,478,413",Substitution,0.003375
1938,28s,C,G,396,PASS,"DP=264177;AF=0.003161;SB=8;DP4=128891,134207,437,411",Substitution,0.003161
1945,28s,G,T,4240,PASS,"DP=262653;AF=0.006865;SB=9;DP4=128219,132557,852,951",Substitution,0.006865
1956,28s,A,AT,150,PASS,"DP=260107;AF=0.000185;SB=9;DP4=129301,132493,18,30;INDEL;HRUN=1",Indel,0.000185
1967,28s,A,G,372,PASS,"DP=264618;AF=0.003284;SB=1;DP4=127476,134896,432,446",Substitution,0.003284
1967,28s,A,T,925,PASS,"DP=264618;AF=0.004070;SB=19;DP4=127476,134896,482,595",Substitution,0.00407
1971,28s,C,T,2986,PASS,"DP=265332;AF=0.005925;SB=41;DP4=127972,135555,843,729",Substitution,0.005925
1972,28s,G,A,2023,PASS,"DP=265969;AF=0.005061;SB=3;DP4=129268,135099,673,673",Substitution,0.005061
1976,28s,G,A,251,PASS,"DP=267569;AF=0.002545;SB=20;DP4=130462,136171,368,313",Substitution,0.002545
1987,28s,C,T,23262,PASS,"DP=269091;AF=0.014902;SB=64;DP4=128425,136436,2107,1903",Substitution,0.014902
1988,28s,G,A,7514,PASS,"DP=268907;AF=0.008869;SB=103;DP4=130042,136197,1327,1058",Substitution,0.008869
1989,28s,G,A,135,PASS,"DP=269740;AF=0.002736;SB=5;DP4=131834,136830,347,391",Substitution,0.002736
1993,28s,C,T,3036,PASS,"DP=269961;AF=0.005542;SB=0;DP4=131835,136398,731,765",Substitution,0.005542
1994,28s,C,T,282,PASS,"DP=270599;AF=0.003285;SB=17;DP4=132448,136906,473,416",Substitution,0.003285
1995,28s,G,A,25717,PASS,"DP=270512;AF=0.015685;SB=8;DP4=131570,134427,2051,2192",Substitution,0.015685
1997,28s,T,G,85,PASS,"DP=272799;AF=0.003952;SB=242;DP4=133967,136866,1080,667",Substitution,0.003952
2002,28s,AGT,A,26031,PASS,"DP=272313;AF=0.005696;SB=16;DP4=135363,136982,817,734;INDEL;HRUN=1",Indel,0.005696
2015,28s,T,C,118,PASS,"DP=279550;AF=0.002851;SB=1;DP4=137820,140370,401,396",Substitution,0.002851
2018,28s,C,G,3429,PASS,"DP=280068;AF=0.005974;SB=21;DP4=138013,140159,885,788",Substitution,0.005974
2023,28s,C,T,3070,PASS,"DP=281338;AF=0.005904;SB=32;DP4=138538,140840,895,766",Substitution,0.005904
2024,28s,G,A,19283,PASS,"DP=281505;AF=0.014099;SB=29;DP4=137814,139330,2078,1891",Substitution,0.014099
2034,28s,G,C,2359,PASS,"DP=280252;AF=0.005606;SB=23;DP4=139859,138394,846,725",Substitution,0.005606
2035,28s,C,T,3135,PASS,"DP=279000;AF=0.005459;SB=29;DP4=139373,137820,830,693",Substitution,0.005459
2044,28s,T,TG,3078,PASS,"DP=277432;AF=0.001121;SB=4;DP4=142300,137043,150,161;INDEL;HRUN=2",Indel,0.001121
2051,28s,C,A,4469,PASS,"DP=273581;AF=0.006192;SB=30;DP4=139090,131816,938,756",Substitution,0.006192
2051,28s,C,T,49314,PASS,"DP=273581;AF=0.003158;SB=11;DP4=139090,131816,471,393",Substitution,0.003158
2052,28s,G,A,376,PASS,"DP=273004;AF=0.002853;SB=9;DP4=140479,131498,424,355",Substitution,0.002853
2060,28s,G,A,346,PASS,"DP=269845;AF=0.003498;SB=7;DP4=142368,126282,522,422",Substitution,0.003498
2062,28s,C,T,866,PASS,"DP=268302;AF=0.003768;SB=21;DP4=141784,125131,580,431",Substitution,0.003768
2063,28s,G,A,87,PASS,"DP=268271;AF=0.002572;SB=0;DP4=141860,124630,368,322",Substitution,0.002572
2063,28s,G,C,367,PASS,"DP=268271;AF=0.003224;SB=3;DP4=141860,124630,476,396",Substitution,0.003224
2078,28s,C,T,166,PASS,"DP=259716;AF=0.002895;SB=17;DP4=136160,122495,428,324",Substitution,0.002895
2081,28s,C,T,6074,PASS,"DP=258098;AF=0.007931;SB=10;DP4=135163,120581,1120,927",Substitution,0.007931
2084,28s,C,T,134,PASS,"DP=257790;AF=0.002944;SB=0;DP4=136215,120447,406,353",Substitution,0.002944
2085,28s,G,A,2425,PASS,"DP=256493;AF=0.006133;SB=0;DP4=135133,119526,839,734",Substitution,0.006133
2091,28s,C,T,3279,PASS,"DP=252437;AF=0.006861;SB=0;DP4=132224,117989,919,814",Substitution,0.006861
2096,28s,GTGGACGGGA,G,6154,PASS,"DP=247409;AF=0.002098;SB=2;DP4=130471,118016,266,253;INDEL;HRUN=1",Indel,0.002098
2097,28s,TGGACGGGAG,T,204,PASS,"DP=246709;AF=0.000235;SB=0;DP4=130042,118082,30,28;INDEL;HRUN=2",Indel,0.000235
2100,28s,ACGGGAGCGG,A,499,PASS,"DP=244438;AF=0.000385;SB=5;DP4=128835,117110,55,39;INDEL;HRUN=1",Indel,0.000385
2111,28s,G,A,707,PASS,"DP=234071;AF=0.004383;SB=0;DP4=121984,110872,536,490",Substitution,0.004383
2117,28s,G,GGC,302,PASS,"DP=224853;AF=0.000307;SB=6;DP4=118530,108559,31,38;INDEL;HRUN=2",Indel,0.000307
2117,28s,GGCGCGC,G,1062,PASS,"DP=224853;AF=0.000685;SB=0;DP4=117310,107484,82,72;INDEL;HRUN=2",Indel,0.000685
2117,28s,GGCGC,G,22283,PASS,"DP=224853;AF=0.006213;SB=0;DP4=117310,107484,729,668;INDEL;HRUN=2",Indel,0.006213
2117,28s,GGC,G,10277,PASS,"DP=224853;AF=0.003567;SB=4;DP4=117310,107484,433,369;INDEL;HRUN=2",Indel,0.003567
2119,28s,C,G,292,PASS,"DP=225341;AF=0.004739;SB=323;DP4=115932,105788,363,705",Substitution,0.004739
2127,28s,CGCGCGCGT,C,6480,PASS,"DP=218990;AF=0.002817;SB=0;DP4=116449,105218,323,294;INDEL;HRUN=1",Indel,0.002817
2129,28s,CGCGCGT,C,92,PASS,"DP=218460;AF=0.000192;SB=4;DP4=117109,104138,19,23;INDEL;HRUN=1",Indel,0.000192
2133,28s,CGT,C,161,PASS,"DP=220108;AF=0.000250;SB=31;DP4=119663,102068,17,38;INDEL;HRUN=1",Indel,0.00025
2133,28s,C,G,735,PASS,"DP=221788;AF=0.009036;SB=1485;DP4=118658,100160,514,1498",Substitution,0.009036
2135,28s,T,G,45835,PASS,"DP=222173;AF=0.090213;SB=2147483647;DP4=103078,97378,16265,4009",Substitution,0.090213
2137,28s,T,G,21355,PASS,"DP=222171;AF=0.065256;SB=200;DP4=111439,95892,8372,6128",Substitution,0.065256
2140,28s,T,G,18519,PASS,"DP=220599;AF=0.061623;SB=1;DP4=110794,95836,7313,6284",Substitution,0.061623
2142,28s,T,G,2151,PASS,"DP=220319;AF=0.022436;SB=2147483647;DP4=116765,98080,859,4084",Substitution,0.022436
2144,28s,C,G,4241,PASS,"DP=219177;AF=0.012018;SB=111;DP4=115331,100824,1582,1052",Substitution,0.012018
2146,28s,T,G,2840,PASS,"DP=218082;AF=0.023468;SB=10;DP4=113497,98351,2817,2326",Substitution,0.023468
2147,28s,C,G,470,PASS,"DP=217118;AF=0.010612;SB=69;DP4=114052,99786,1101,1203",Substitution,0.010612
2150,28s,A,T,6666,PASS,"DP=215813;AF=0.031296;SB=2788;DP4=110014,92066,2195,4559",Substitution,0.031296
2151,28s,G,GGGC,49314,PASS,"DP=213773;AF=0.026060;SB=29;DP4=112121,97920,3097,2474;INDEL;HRUN=3",Indel,0.02606
2151,28s,G,GGGCGGC,389,PASS,"DP=213773;AF=0.000379;SB=2;DP4=112121,97920,46,35;INDEL;HRUN=3",Indel,0.000379
2151,28s,GGGC,G,49314,PASS,"DP=213773;AF=0.034303;SB=13;DP4=107115,93273,4008,3325;INDEL;HRUN=3",Indel,0.034303
2151,28s,GGGCGGC,G,49314,PASS,"DP=213773;AF=0.035669;SB=8;DP4=107115,93273,4012,3613;INDEL;HRUN=3",Indel,0.035669
2151,28s,GGGCGGCGGC,G,3493,PASS,"DP=213773;AF=0.001600;SB=84;DP4=107115,93273,128,214;INDEL;HRUN=3",Indel,0.0016
2151,28s,GGGCGGCGGCGGC,G,78,PASS,"DP=213773;AF=0.000168;SB=26;DP4=107115,93273,10,26;INDEL;HRUN=3",Indel,0.000168
2165,28s,GCGGCGGC,G,5826,PASS,"DP=201058;AF=0.002815;SB=108;DP4=108315,94394,222,344;INDEL;HRUN=1",Indel,0.002815
2168,28s,GCGGC,G,49314,PASS,"DP=195957;AF=0.036712;SB=46;DP4=101570,91410,3604,3590;INDEL;HRUN=1",Indel,0.036712
2171,28s,GC,G,49314,PASS,"DP=192071;AF=0.031561;SB=20;DP4=97115,90992,3026,3036;INDEL;HRUN=1",Indel,0.031561
2172,28s,C,CGG,19003,PASS,"DP=190413;AF=0.008770;SB=9;DP4=97812,92862,890,780;INDEL;HRUN=5",Indel,0.00877
2172,28s,C,CGGCGG,364,PASS,"DP=190413;AF=0.002017;SB=229;DP4=97812,92862,100,284;INDEL;HRUN=5",Indel,0.002017
2172,28s,CG,C,2053,PASS,"DP=190413;AF=0.001513;SB=18;DP4=98618,93729,127,161;INDEL;HRUN=5",Indel,0.001513
2172,28s,CGGG,C,1067,PASS,"DP=190413;AF=0.001035;SB=1;DP4=98618,93729,104,93;INDEL;HRUN=5",Indel,0.001035
2174,28s,G,GC,190,PASS,"DP=188309;AF=0.000648;SB=27;DP4=96499,94293,79,43;INDEL;HRUN=5",Indel,0.000648
2176,28s,G,GGT,49314,PASS,"DP=187045;AF=0.143490;SB=2147483647;DP4=86256,74863,7663,19176;INDEL;HRUN=5",Indel,0.14349
2176,28s,G,GT,260,PASS,"DP=187045;AF=0.001155;SB=531;DP4=86256,74863,11,205;INDEL;HRUN=5",Indel,0.001155
2176,28s,G,T,49314,PASS,"DP=188288;AF=0.076861;SB=595;DP4=87641,86096,6276,8196",Substitution,0.076861
2177,28s,G,GTT,211,PASS,"DP=184335;AF=0.000456;SB=152;DP4=93364,94509,7,77;INDEL;HRUN=1",Indel,0.000456
2178,28s,T,TGG,8517,PASS,"DP=183415;AF=0.006041;SB=337;DP4=89940,93950,340,768;INDEL;HRUN=1",Indel,0.006041
2179,28s,G,GTT,340,PASS,"DP=182393;AF=0.000559;SB=160;DP4=89225,94841,10,92;INDEL;HRUN=1",Indel,0.000559
2180,28s,T,TGG,3773,PASS,"DP=181774;AF=0.002641;SB=1010;DP4=87973,94633,21,459;INDEL;HRUN=4",Indel,0.002641
2181,28s,G,GT,929,PASS,"DP=170584;AF=0.002579;SB=4;DP4=86902,95322,219,221;INDEL;HRUN=4",Indel,0.002579
2185,28s,T,TG,65,PASS,"DP=160311;AF=0.000973;SB=234;DP4=70298,95459,128,28;INDEL;HRUN=2",Indel,0.000973
2185,28s,T,TC,373,PASS,"DP=160311;AF=0.000742;SB=73;DP4=70298,95459,22,97;INDEL;HRUN=2",Indel,0.000742
2187,28s,C,CA,574,PASS,"DP=155671;AF=0.003161;SB=715;DP4=58039,52723,443,49;INDEL;HRUN=1",Indel,0.003161
2187,28s,C,CT,49314,PASS,"DP=155671;AF=0.285622;SB=2147483647;DP4=58039,52723,4038,40425;INDEL;HRUN=1",Indel,0.285622
2187,28s,C,CG,22961,PASS,"DP=155671;AF=0.026036;SB=1231;DP4=58039,52723,1362,2691;INDEL;HRUN=1",Indel,0.026036
2187,28s,C,CTT,140,PASS,"DP=155671;AF=0.000405;SB=118;DP4=58039,52723,59,4;INDEL;HRUN=1",Indel,0.000405
2188,28s,T,TG,5922,PASS,"DP=130475;AF=0.007979;SB=148;DP4=52261,95559,248,793;INDEL;HRUN=5",Indel,0.007979
2188,28s,T,TTA,2998,PASS,"DP=130475;AF=0.005258;SB=2616;DP4=52261,95559,664,22;INDEL;HRUN=5",Indel,0.005258
2188,28s,T,TTGC,399,PASS,"DP=130475;AF=0.000881;SB=495;DP4=52261,95559,114,1;INDEL;HRUN=5",Indel,0.000881
2188,28s,T,TTAC,210,PASS,"DP=130475;AF=0.000651;SB=361;DP4=52261,95559,84,1;INDEL;HRUN=5",Indel,0.000651
2188,28s,T,TA,1339,PASS,"DP=130475;AF=0.002920;SB=403;DP4=52261,95559,24,357;INDEL;HRUN=5",Indel,0.00292
2188,28s,T,TTG,13227,PASS,"DP=130475;AF=0.015850;SB=2147483647;DP4=52261,95559,2061,7;INDEL;HRUN=5",Indel,0.01585
2188,28s,T,TTC,1873,PASS,"DP=130475;AF=0.003549;SB=847;DP4=52261,95559,370,93;INDEL;HRUN=5",Indel,0.003549
2188,28s,T,TTCG,974,PASS,"DP=130475;AF=0.002192;SB=1289;DP4=52261,95559,286,0;INDEL;HRUN=5",Indel,0.002192
2188,28s,T,TC,2244,PASS,"DP=130475;AF=0.003480;SB=17;DP4=52261,95559,136,318;INDEL;HRUN=5",Indel,0.00348
2188,28s,T,TGG,350,PASS,"DP=130475;AF=0.002069;SB=1217;DP4=52261,95559,270,0;INDEL;HRUN=5",Indel,0.002069
2188,28s,T,TTGG,1414,PASS,"DP=130475;AF=0.002207;SB=1298;DP4=52261,95559,288,0;INDEL;HRUN=5",Indel,0.002207
2188,28s,T,TTGGG,221,PASS,"DP=130475;AF=0.000743;SB=437;DP4=52261,95559,97,0;INDEL;HRUN=5",Indel,0.000743
2188,28s,T,TTCC,2571,PASS,"DP=130475;AF=0.004139;SB=546;DP4=52261,95559,371,169;INDEL;HRUN=5",Indel,0.004139
2188,28s,T,TTGCG,377,PASS,"DP=130475;AF=0.001081;SB=636;DP4=52261,95559,141,0;INDEL;HRUN=5",Indel,0.001081
2188,28s,T,TGGG,61,PASS,"DP=130475;AF=0.000621;SB=365;DP4=52261,95559,81,0;INDEL;HRUN=5",Indel,0.000621
2188,28s,T,TTGCC,69,PASS,"DP=130475;AF=0.000353;SB=188;DP4=52261,95559,45,1;INDEL;HRUN=5",Indel,0.000353
2188,28s,T,TTAG,86,PASS,"DP=130475;AF=0.000475;SB=279;DP4=52261,95559,62,0;INDEL;HRUN=5",Indel,0.000475
2188,28s,T,TTGCCG,135,PASS,"DP=130475;AF=0.000567;SB=334;DP4=52261,95559,74,0;INDEL;HRUN=5",Indel,0.000567
2188,28s,T,TTCGCG,159,PASS,"DP=130475;AF=0.000598;SB=352;DP4=52261,95559,78,0;INDEL;HRUN=5",Indel,0.000598
2188,28s,T,TTCGG,540,PASS,"DP=130475;AF=0.001211;SB=712;DP4=52261,95559,158,0;INDEL;HRUN=5",Indel,0.001211
2188,28s,T,TTCCG,912,PASS,"DP=130475;AF=0.002161;SB=1271;DP4=52261,95559,282,0;INDEL;HRUN=5",Indel,0.002161
2188,28s,T,TTCGGG,525,PASS,"DP=130475;AF=0.001111;SB=654;DP4=52261,95559,145,0;INDEL;HRUN=5",Indel,0.001111
2188,28s,T,TTGCGG,93,PASS,"DP=130475;AF=0.000429;SB=252;DP4=52261,95559,56,0;INDEL;HRUN=5",Indel,0.000429
2188,28s,T,TTGGGG,300,PASS,"DP=130475;AF=0.000713;SB=419;DP4=52261,95559,93,0;INDEL;HRUN=5",Indel,0.000713
2188,28s,T,TTCCGG,440,PASS,"DP=130475;AF=0.001050;SB=618;DP4=52261,95559,137,0;INDEL;HRUN=5",Indel,0.00105
2189,28s,C,T,456,PASS,"DP=132282;AF=0.144653;SB=2147483647;DP4=21617,85767,6938,12197",Substitution,0.144653
2193,28s,C,CG,143,PASS,"DP=128776;AF=0.000567;SB=61;DP4=32022,98269,2,71;INDEL;HRUN=1",Indel,0.000567
2193,28s,CG,C,616,PASS,"DP=128776;AF=0.001266;SB=317;DP4=31948,98563,112,51;INDEL;HRUN=1",Indel,0.001266
2194,28s,G,GC,49314,PASS,"DP=129231;AF=0.127052;SB=2147483647;DP4=31945,78388,20,16399;INDEL;HRUN=11",Indel,0.127052
2194,28s,G,GCC,10500,PASS,"DP=129231;AF=0.018215;SB=2147483647;DP4=31945,78388,1,2353;INDEL;HRUN=11",Indel,0.018215
2194,28s,G,GCGC,638,PASS,"DP=129231;AF=0.005865;SB=496;DP4=31945,78388,54,704;INDEL;HRUN=11",Indel,0.005865
2194,28s,GC,G,49314,PASS,"DP=129231;AF=0.085359;SB=2147483647;DP4=31243,82609,244,10787;INDEL;HRUN=11",Indel,0.085359
2194,28s,GCC,G,35730,PASS,"DP=129231;AF=0.040176;SB=1983;DP4=31243,82609,529,4663;INDEL;HRUN=11",Indel,0.040176
2194,28s,G,C,49314,PASS,"DP=130183;AF=0.242451;SB=2147483647;DP4=12042,85957,19784,12075",Substitution,0.242451
2195,28s,C,CG,14895,PASS,"DP=132251;AF=0.008537;SB=2;DP4=32249,99264,284,845;INDEL;HRUN=11",Indel,0.008537
2201,28s,C,CA,16164,PASS,"DP=141417;AF=0.008047;SB=1074;DP4=36167,104701,24,1114;INDEL;HRUN=11",Indel,0.008047
2204,28s,CCA,C,345,PASS,"DP=145144;AF=0.000875;SB=119;DP4=37210,109134,70,57;INDEL;HRUN=11",Indel,0.000875
2206,28s,A,C,77,PASS,"DP=123745;AF=0.011273;SB=2623;DP4=12013,109705,647,749",Substitution,0.011273
2214,28s,T,TC,5634,PASS,"DP=137150;AF=0.003230;SB=27;DP4=19733,117609,41,402;INDEL;HRUN=4",Indel,0.00323
2230,28s,A,C,91,PASS,"DP=162212;AF=0.008144;SB=1388;DP4=33617,127005,696,629",Substitution,0.008144
2273,28s,C,G,1710,PASS,"DP=223022;AF=0.004878;SB=4;DP4=74981,146725,354,734",Substitution,0.004878
2276,28s,C,G,813,PASS,"DP=227513;AF=0.005059;SB=2;DP4=78498,147612,391,764",Substitution,0.005059
2280,28s,T,G,122,PASS,"DP=233043;AF=0.014963;SB=2942;DP4=81049,148271,2309,1178",Substitution,0.014963
2298,28s,G,A,8235,PASS,"DP=252530;AF=0.008724;SB=6;DP4=98640,151496,896,1307",Substitution,0.008724
2301,28s,C,T,167,PASS,"DP=254457;AF=0.003215;SB=1;DP4=101355,151922,322,496",Substitution,0.003215
2302,28s,C,T,6047,PASS,"DP=255571;AF=0.008769;SB=1;DP4=101782,151174,891,1350",Substitution,0.008769
2309,28s,C,T,346,PASS,"DP=262597;AF=0.003488;SB=32;DP4=107179,154182,428,488",Substitution,0.003488
2316,28s,CG,C,1056,PASS,"DP=264909;AF=0.003095;SB=18;DP4=112422,153240,312,508;INDEL;HRUN=1",Indel,0.003095
2316,28s,C,T,1827,PASS,"DP=266482;AF=0.004687;SB=22;DP4=112121,152778,480,769",Substitution,0.004687
2317,28s,G,A,5956,PASS,"DP=266958;AF=0.007042;SB=6;DP4=113023,151023,779,1101",Substitution,0.007042
2318,28s,C,T,10585,PASS,"DP=267803;AF=0.012812;SB=15;DP4=113487,150621,1409,2022",Substitution,0.012812
2321,28s,GC,G,84,PASS,"DP=270491;AF=0.000155;SB=0;DP4=118189,153007,19,23;INDEL;HRUN=3",Indel,0.000155
2322,28s,C,T,77,PASS,"DP=271618;AF=0.002481;SB=4;DP4=118532,152130,283,391",Substitution,0.002481
2324,28s,C,T,972,PASS,"DP=273774;AF=0.004091;SB=3;DP4=120570,151760,484,636",Substitution,0.004091
2325,28s,G,A,1645,PASS,"DP=274769;AF=0.004713;SB=50;DP4=121590,151498,497,798",Substitution,0.004713
2327,28s,G,T,939,PASS,"DP=276130;AF=0.003690;SB=8;DP4=123302,151735,433,586",Substitution,0.00369
2329,28s,G,A,679,PASS,"DP=278173;AF=0.003419;SB=73;DP4=124907,152104,345,606",Substitution,0.003419
2332,28s,G,T,3534,PASS,"DP=280511;AF=0.005508;SB=59;DP4=126490,152397,606,939",Substitution,0.005508
2335,28s,G,A,3200,PASS,"DP=281780;AF=0.005330;SB=7;DP4=129145,150724,667,835",Substitution,0.00533
2337,28s,C,T,2451,PASS,"DP=284889;AF=0.005202;SB=18;DP4=132269,150894,645,837",Substitution,0.005202
2338,28s,G,A,1025,PASS,"DP=285614;AF=0.004961;SB=89;DP4=133450,149771,553,864",Substitution,0.004961
2366,28s,A,C,327,PASS,"DP=289024;AF=0.007906;SB=5;DP4=147979,138256,1207,1078",Substitution,0.007906
2369,28s,A,T,3437,PASS,"DP=289798;AF=0.009279;SB=250;DP4=149947,136607,1134,1555",Substitution,0.009279
2376,28s,C,A,49314,PASS,"DP=288778;AF=0.004893;SB=92;DP4=152035,131330,641,772",Substitution,0.004893
2376,28s,C,T,15343,PASS,"DP=288778;AF=0.013568;SB=193;DP4=152035,131330,1813,2105",Substitution,0.013568
2380,28s,A,C,83,PASS,"DP=289412;AF=0.006410;SB=2138;DP4=156693,130288,358,1503",Substitution,0.00641
2381,28s,A,C,128,PASS,"DP=289425;AF=0.012362;SB=0;DP4=155372,128612,1964,1615",Substitution,0.012362
2386,28s,G,A,806,PASS,"DP=288580;AF=0.003538;SB=173;DP4=159385,127887,428,593",Substitution,0.003538
2393,28s,G,A,355,PASS,"DP=288051;AF=0.003118;SB=173;DP4=163022,123042,382,516",Substitution,0.003118
2393,28s,G,T,646,PASS,"DP=288051;AF=0.003548;SB=64;DP4=163022,123042,501,521",Substitution,0.003548
2406,28s,G,A,383,PASS,"DP=285561;AF=0.003134;SB=193;DP4=166927,117541,388,507",Substitution,0.003134
2407,28s,T,G,243,PASS,"DP=285883;AF=0.010770;SB=363;DP4=166307,116250,1460,1620",Substitution,0.01077
2418,28s,C,A,176,PASS,"DP=287750;AF=0.003698;SB=147;DP4=169950,116562,502,562",Substitution,0.003698
2433,28s,G,T,2385,PASS,"DP=283257;AF=0.005776;SB=47;DP4=169090,112443,897,739",Substitution,0.005776
2434,28s,G,T,1167,PASS,"DP=283275;AF=0.004452;SB=81;DP4=169058,112867,654,607",Substitution,0.004452
2438,28s,G,T,7875,PASS,"DP=282703;AF=0.008196;SB=367;DP4=169655,110642,1096,1221",Substitution,0.008196
2440,28s,C,T,7731,PASS,"DP=281666;AF=0.008709;SB=192;DP4=168431,110547,1256,1197",Substitution,0.008709
2451,28s,G,A,731,PASS,"DP=281478;AF=0.003293;SB=175;DP4=171066,109240,434,493",Substitution,0.003293
2454,28s,G,A,2750,PASS,"DP=282075;AF=0.005513;SB=173;DP4=170250,110004,775,780",Substitution,0.005513
2457,28s,C,T,18056,PASS,"DP=281662;AF=0.012433;SB=353;DP4=168664,109251,1756,1746",Substitution,0.012433
2461,28s,C,T,11071,PASS,"DP=282160;AF=0.009509;SB=203;DP4=169295,109956,1384,1299",Substitution,0.009509
2465,28s,G,A,5884,PASS,"DP=285007;AF=0.008252;SB=339;DP4=172814,109548,1144,1208",Substitution,0.008252
2466,28s,T,G,90,PASS,"DP=285683;AF=0.008285;SB=1875;DP4=172980,109853,741,1628",Substitution,0.008285
2469,28s,C,T,244,PASS,"DP=286307;AF=0.003475;SB=129;DP4=171904,113028,484,511",Substitution,0.003475
2473,28s,G,T,679,PASS,"DP=289359;AF=0.003957;SB=129;DP4=172671,115090,562,583",Substitution,0.003957
2477,28s,C,T,2878,PASS,"DP=288362;AF=0.005750;SB=94;DP4=170773,115669,862,796",Substitution,0.00575
2478,28s,G,A,5580,PASS,"DP=288222;AF=0.007231;SB=260;DP4=170689,114864,1002,1082",Substitution,0.007231
2481,28s,C,T,7715,PASS,"DP=288073;AF=0.007717;SB=104;DP4=170830,114798,1175,1048",Substitution,0.007717
2482,28s,G,A,1627,PASS,"DP=289053;AF=0.004401;SB=238;DP4=172612,114947,582,690",Substitution,0.004401
2486,28s,G,T,3925,PASS,"DP=289956;AF=0.006180;SB=64;DP4=171317,116734,959,833",Substitution,0.00618
2491,28s,C,T,5499,PASS,"DP=289247;AF=0.007343;SB=172;DP4=168078,118739,1046,1078",Substitution,0.007343
2492,28s,G,A,110,PASS,"DP=289000;AF=0.003131;SB=65;DP4=168373,118404,454,451",Substitution,0.003131
2492,28s,G,C,507,PASS,"DP=289000;AF=0.003962;SB=49;DP4=168373,118404,602,550",Substitution,0.003962
2493,28s,T,G,159,PASS,"DP=288781;AF=0.007656;SB=2571;DP4=168082,118011,509,1716",Substitution,0.007656
2501,28s,G,A,21662,PASS,"DP=288605;AF=0.015218;SB=308;DP4=164142,119742,2151,2241",Substitution,0.015218
2504,28s,C,G,551,PASS,"DP=287450;AF=0.003507;SB=132;DP4=165099,120005,476,554",Substitution,0.003507
2504,28s,C,T,689,PASS,"DP=287450;AF=0.003695;SB=171;DP4=165099,120005,475,587",Substitution,0.003695
2505,28s,G,A,492,PASS,"DP=286997;AF=0.003551;SB=128;DP4=165736,119933,473,546",Substitution,0.003551
2508,28s,C,T,5827,PASS,"DP=287353;AF=0.007764;SB=59;DP4=164884,119525,1178,1053",Substitution,0.007764
2511,28s,A,C,110,PASS,"DP=287911;AF=0.006919;SB=2681;DP4=166816,118545,398,1595",Substitution,0.006919
2519,28s,C,T,166,PASS,"DP=282031;AF=0.002844;SB=87;DP4=159514,121403,370,432",Substitution,0.002844
2520,28s,G,C,489,PASS,"DP=281382;AF=0.003572;SB=73;DP4=159378,120739,488,523",Substitution,0.003572
2529,28s,TC,T,11846,PASS,"DP=273584;AF=0.003286;SB=86;DP4=153288,121501,412,487;INDEL;HRUN=4",Indel,0.003286
2533,28s,C,T,905,PASS,"DP=274139;AF=0.004946;SB=4;DP4=150602,121662,732,624",Substitution,0.004946
2540,28s,G,A,5139,PASS,"DP=272377;AF=0.007750;SB=31;DP4=148975,120815,1088,1023",Substitution,0.00775
2543,28s,G,A,138,PASS,"DP=269242;AF=0.002838;SB=28;DP4=146051,122165,372,392",Substitution,0.002838
2558,28s,G,A,6856,PASS,"DP=265610;AF=0.007831;SB=4;DP4=137015,126309,1060,1020",Substitution,0.007831
2561,28s,G,A,5567,PASS,"DP=265616;AF=0.007153;SB=4;DP4=135733,127656,959,941",Substitution,0.007153
2562,28s,C,T,5764,PASS,"DP=265807;AF=0.007186;SB=3;DP4=135853,127674,967,943",Substitution,0.007186
2568,28s,G,T,88,PASS,"DP=266421;AF=0.002552;SB=1;DP4=136083,129553,343,337",Substitution,0.002552
2576,28s,C,T,1365,PASS,"DP=266837;AF=0.004179;SB=65;DP4=133030,132376,645,470",Substitution,0.004179
2582,28s,C,T,3016,PASS,"DP=265820;AF=0.006613;SB=8;DP4=129521,134208,895,863",Substitution,0.006613
2584,28s,C,T,10375,PASS,"DP=265273;AF=0.009594;SB=25;DP4=129469,132992,1331,1214",Substitution,0.009594
2588,28s,C,T,5114,PASS,"DP=265375;AF=0.007295;SB=21;DP4=129428,133529,1013,923",Substitution,0.007295
2594,28s,C,T,2678,PASS,"DP=265541;AF=0.005690;SB=6;DP4=127948,135728,756,755",Substitution,0.00569
2603,28s,C,A,2949,PASS,"DP=266880;AF=0.005939;SB=36;DP4=125506,139576,824,761",Substitution,0.005939
2604,28s,G,A,802,PASS,"DP=266965;AF=0.003839;SB=46;DP4=125196,138950,554,471",Substitution,0.003839
2604,28s,G,T,2844,PASS,"DP=266965;AF=0.005750;SB=16;DP4=125196,138950,773,762",Substitution,0.00575
2606,28s,C,T,2781,PASS,"DP=267688;AF=0.005230;SB=13;DP4=126444,139575,704,696",Substitution,0.00523
2607,28s,G,A,2703,PASS,"DP=268654;AF=0.005565;SB=24;DP4=126787,139281,769,726",Substitution,0.005565
2607,28s,G,T,49314,PASS,"DP=268654;AF=0.003707;SB=18;DP4=126787,139281,513,483",Substitution,0.003707
2615,28s,C,T,5495,PASS,"DP=268778;AF=0.007553;SB=33;DP4=124619,141770,1029,1001",Substitution,0.007553
2616,28s,G,A,143,PASS,"DP=268782;AF=0.002876;SB=7;DP4=125382,142281,382,391",Substitution,0.002876
2622,28s,A,G,4642,PASS,"DP=270180;AF=0.008091;SB=58;DP4=124420,142797,1131,1055",Substitution,0.008091
2623,28s,GTTCTC,G,25744,PASS,"DP=269351;AF=0.005966;SB=30;DP4=125475,143867,816,791;INDEL;HRUN=2",Indel,0.005966
2624,28s,TTC,T,222,PASS,"DP=269887;AF=0.000237;SB=1;DP4=126811,144354,28,36;INDEL;HRUN=2",Indel,0.000237
2628,28s,C,CT,8110,PASS,"DP=272467;AF=0.002492;SB=19;DP4=127627,145523,350,329;INDEL;HRUN=4",Indel,0.002492
2635,28s,T,G,360,PASS,"DP=273691;AF=0.009061;SB=2917;DP4=125238,145701,2033,449",Substitution,0.009061
2649,28s,G,A,3151,PASS,"DP=271821;AF=0.005364;SB=29;DP4=124243,145882,733,725",Substitution,0.005364
2650,28s,C,T,9374,PASS,"DP=271306;AF=0.008868;SB=150;DP4=123286,145398,1302,1104",Substitution,0.008868
2651,28s,G,A,691,PASS,"DP=271236;AF=0.003263;SB=20;DP4=124399,145720,447,438",Substitution,0.003263
2653,28s,C,T,177,PASS,"DP=271947;AF=0.003126;SB=83;DP4=124289,146539,476,374",Substitution,0.003126
2657,28s,G,A,348,PASS,"DP=271266;AF=0.003049;SB=107;DP4=122628,147579,472,355",Substitution,0.003049
2659,28s,A,AT,11152,PASS,"DP=268470;AF=0.003129;SB=7;DP4=120976,148556,397,443;INDEL;HRUN=1",Indel,0.003129
2667,28s,G,A,1365,PASS,"DP=268496;AF=0.004075;SB=153;DP4=117836,149336,617,477",Substitution,0.004075
2670,28s,C,T,226,PASS,"DP=268578;AF=0.003120;SB=17;DP4=117615,149862,403,435",Substitution,0.00312
2671,28s,CGA,C,83,PASS,"DP=267537;AF=0.000138;SB=3;DP4=117975,151443,19,18;INDEL;HRUN=1",Indel,0.000138
2671,28s,C,G,365,PASS,"DP=269457;AF=0.003195;SB=10;DP4=117100,150471,407,465",Substitution,0.003195
2671,28s,C,T,299,PASS,"DP=269457;AF=0.003073;SB=32;DP4=117100,150471,412,416",Substitution,0.003073
2672,28s,G,A,327,PASS,"DP=270165;AF=0.002783;SB=153;DP4=117524,151621,440,312",Substitution,0.002783
2674,28s,G,GA,10814,PASS,"DP=268996;AF=0.002933;SB=4;DP4=117510,152492,330,459;INDEL;HRUN=1",Indel,0.002933
2677,28s,AG,A,805,PASS,"DP=269744;AF=0.000512;SB=3;DP4=117110,154232,64,74;INDEL;HRUN=4",Indel,0.000512
2682,28s,C,A,660,PASS,"DP=270736;AF=0.004093;SB=94;DP4=114085,154547,575,533",Substitution,0.004093
2682,28s,C,T,167,PASS,"DP=270736;AF=0.003206;SB=35;DP4=114085,154547,422,446",Substitution,0.003206
2684,28s,C,T,2235,PASS,"DP=270574;AF=0.006837;SB=147;DP4=113006,155435,950,900",Substitution,0.006837
2687,28s,G,A,5631,PASS,"DP=269387;AF=0.006567;SB=153;DP4=111926,155488,911,858",Substitution,0.006567
2699,28s,G,A,660,PASS,"DP=271072;AF=0.003361;SB=122;DP4=108923,161043,476,435",Substitution,0.003361
2703,28s,C,T,3812,PASS,"DP=272162;AF=0.006092;SB=173;DP4=108313,161920,840,818",Substitution,0.006092
2704,28s,G,T,842,PASS,"DP=273625;AF=0.003658;SB=88;DP4=109619,162863,498,503",Substitution,0.003658
2705,28s,G,C,499,PASS,"DP=273698;AF=0.003252;SB=72;DP4=109787,162863,440,452",Substitution,0.003252
2709,28s,C,T,10718,PASS,"DP=273819;AF=0.010474;SB=248;DP4=107722,162961,1420,1448",Substitution,0.010474
2710,28s,G,A,3043,PASS,"DP=272952;AF=0.005532;SB=58;DP4=108198,163054,695,815",Substitution,0.005532
2712,28s,C,T,489,PASS,"DP=272210;AF=0.003020;SB=111;DP4=107071,164089,422,400",Substitution,0.00302
2716,28s,G,A,17112,PASS,"DP=270687;AF=0.012542;SB=203;DP4=104858,162297,1605,1790",Substitution,0.012542
2719,28s,C,T,9771,PASS,"DP=271221;AF=0.009992;SB=249;DP4=103256,164984,1313,1397",Substitution,0.009992
2730,28s,C,G,11167,PASS,"DP=274549;AF=0.010319;SB=288;DP4=101769,169674,1359,1474",Substitution,0.010319
2731,28s,G,A,96,PASS,"DP=273358;AF=0.002133;SB=12;DP4=103279,169197,244,339",Substitution,0.002133
2732,28s,C,A,678,PASS,"DP=273930;AF=0.003092;SB=83;DP4=103648,169293,406,441",Substitution,0.003092
2733,28s,T,G,124,PASS,"DP=274954;AF=0.003702;SB=166;DP4=103346,169523,612,616",Substitution,0.003702
2738,28s,C,T,254,PASS,"DP=275033;AF=0.003258;SB=123;DP4=101915,171907,440,456",Substitution,0.003258
2747,28s,C,G,323,PASS,"DP=273440;AF=0.003269;SB=75;DP4=99568,172728,408,486",Substitution,0.003269
2749,28s,G,A,6278,PASS,"DP=272836;AF=0.007624;SB=252;DP4=99059,171319,999,1081",Substitution,0.007624
2753,28s,G,T,298,PASS,"DP=272314;AF=0.002754;SB=63;DP4=99214,172271,342,408",Substitution,0.002754
2757,28s,G,C,5313,PASS,"DP=271779;AF=0.006818;SB=250;DP4=97064,172650,891,967",Substitution,0.006818
2758,28s,G,T,404,PASS,"DP=271642;AF=0.003707;SB=55;DP4=97297,172843,435,572",Substitution,0.003707
2770,28s,G,A,4763,PASS,"DP=263845;AF=0.006367;SB=160;DP4=92573,169375,760,920",Substitution,0.006367
2772,28s,G,A,3497,PASS,"DP=261638;AF=0.005626;SB=201;DP4=92299,167633,699,773",Substitution,0.005626
2774,28s,C,A,5151,PASS,"DP=260437;AF=0.007795;SB=333;DP4=91656,166596,990,1040",Substitution,0.007795
2775,28s,G,A,106,PASS,"DP=260694;AF=0.002478;SB=53;DP4=91995,167145,286,360",Substitution,0.002478
2775,28s,G,C,222,PASS,"DP=260694;AF=0.002773;SB=139;DP4=91995,167145,361,368",Substitution,0.002773
2779,28s,C,T,1842,PASS,"DP=258484;AF=0.005107;SB=153;DP4=91027,165878,612,708",Substitution,0.005107
2780,28s,G,A,7000,PASS,"DP=257684;AF=0.008371;SB=406;DP4=90792,164482,1075,1082",Substitution,0.008371
2783,28s,C,A,81,PASS,"DP=257204;AF=0.003266;SB=115;DP4=91096,165132,398,442",Substitution,0.003266
2791,28s,C,T,5334,PASS,"DP=255985;AF=0.008360;SB=488;DP4=88151,165343,1080,1060",Substitution,0.00836
2792,28s,G,A,2903,PASS,"DP=254904;AF=0.005351;SB=211;DP4=88651,164566,651,713",Substitution,0.005351
2799,28s,G,A,102,PASS,"DP=252245;AF=0.002696;SB=166;DP4=88855,162503,349,331",Substitution,0.002696
2808,28s,G,A,1947,PASS,"DP=248957;AF=0.005559;SB=368;DP4=85689,161657,713,671",Substitution,0.005559
2810,28s,G,A,348,PASS,"DP=248223;AF=0.002997;SB=173;DP4=86091,161136,375,369",Substitution,0.002997
2816,28s,C,A,9898,PASS,"DP=245963;AF=0.010282;SB=618;DP4=85234,158097,1299,1230",Substitution,0.010282
2829,28s,G,A,316,PASS,"DP=235477;AF=0.003083;SB=196;DP4=83720,150819,382,344",Substitution,0.003083
2836,28s,T,G,242,PASS,"DP=232136;AF=0.011101;SB=2147483647;DP4=81162,148170,2088,565",Substitution,0.011101
2845,28s,G,A,370,PASS,"DP=228156;AF=0.003318;SB=213;DP4=83057,144127,408,349",Substitution,0.003318
2849,28s,A,C,433,PASS,"DP=226005;AF=0.009752;SB=3166;DP4=81116,141191,2066,819",Substitution,0.009752
2853,28s,G,A,9432,PASS,"DP=221402;AF=0.010583;SB=660;DP4=81069,137124,1285,1058",Substitution,0.010583
2853,28s,G,C,49314,PASS,"DP=221402;AF=0.003184;SB=212;DP4=81069,137124,393,322",Substitution,0.003184
2854,28s,G,T,403,PASS,"DP=219444;AF=0.003085;SB=103;DP4=81396,137256,337,340",Substitution,0.003085
2860,28s,C,T,2087,PASS,"DP=218495;AF=0.006266;SB=394;DP4=81650,135113,759,610",Substitution,0.006266
2874,28s,C,T,95,PASS,"DP=213124;AF=0.003284;SB=152;DP4=82445,129199,379,321",Substitution,0.003284
2883,28s,G,T,5570,PASS,"DP=207700;AF=0.011897;SB=120;DP4=80471,124242,1148,1323",Substitution,0.011897
2887,28s,G,T,97,PASS,"DP=205941;AF=0.002433;SB=142;DP4=81262,124092,285,216",Substitution,0.002433
2891,28s,C,G,2908,PASS,"DP=205895;AF=0.008907;SB=516;DP4=81006,122610,1055,779",Substitution,0.008907
2894,28s,A,T,620,PASS,"DP=205138;AF=0.007907;SB=577;DP4=81558,117200,357,1265",Substitution,0.007907
2908,28s,C,T,49314,PASS,"DP=201626;AF=0.005163;SB=362;DP4=80154,118846,624,417",Substitution,0.005163
2951,28s,A,C,297,PASS,"DP=188924;AF=0.011878;SB=435;DP4=68217,117450,526,1756",Substitution,0.011878
2962,28s,C,G,24846,PASS,"DP=184248;AF=0.023137;SB=149;DP4=64648,115186,1791,2476",Substitution,0.023137
2963,28s,CGCCCCCCCCACGCCCGGGGCACCCCCCTCGCG,C,212,PASS,"DP=182791;AF=0.000279;SB=0;DP4=66527,118294,18,33;INDEL;HRUN=1",Indel,0.000279
2964,28s,G,GC,15836,PASS,"DP=183225;AF=0.011674;SB=1;DP4=65540,116416,779,1360;INDEL;HRUN=8",Indel,0.011674
2964,28s,GC,G,295,PASS,"DP=183225;AF=0.001681;SB=2;DP4=66271,117714,106,202;INDEL;HRUN=8",Indel,0.001681
2973,28s,A,C,7241,PASS,"DP=185124;AF=0.030752;SB=2147483647;DP4=57374,121291,4532,1169",Substitution,0.030752
3001,28s,C,G,662,PASS,"DP=179003;AF=0.007380;SB=0;DP4=53640,123637,404,931",Substitution,0.00738
3011,28s,A,C,18699,PASS,"DP=175204;AF=0.058052;SB=2147483647;DP4=42502,121769,6323,3855",Substitution,0.058052
3022,28s,G,C,484,PASS,"DP=165511;AF=0.006815;SB=2147483647;DP4=42776,121432,955,182",Substitution,0.006815
3027,28s,T,G,3597,PASS,"DP=159391;AF=0.025547;SB=2147483647;DP4=27010,117537,9411,2518",Substitution,0.025547
3031,28s,T,G,2102,PASS,"DP=158469;AF=0.021600;SB=2147483647;DP4=32275,116060,5116,2553",Substitution,0.0216
3035,28s,T,G,49314,PASS,"DP=157949;AF=0.020646;SB=2147483647;DP4=30799,114389,4275,2772",Substitution,0.020646
3040,28s,A,C,49314,PASS,"DP=155680;AF=0.040615;SB=2147483647;DP4=25489,78881,3341,2989",Substitution,0.040615
3040,28s,A,G,49314,PASS,"DP=155680;AF=0.273619;SB=1;DP4=25489,78881,10879,33832",Substitution,0.273619
3047,28s,G,GCC,110,PASS,"DP=149503;AF=0.000562;SB=49;DP4=40181,110926,6,78;INDEL;HRUN=3",Indel,0.000562
3047,28s,G,C,342,PASS,"DP=151238;AF=0.006777;SB=2161;DP4=39427,110641,754,271",Substitution,0.006777
3049,28s,C,CCT,49314,PASS,"DP=149575;AF=0.077941;SB=370;DP4=36776,100042,2508,9150;INDEL;HRUN=3",Indel,0.077941
3049,28s,C,CCG,615,PASS,"DP=149575;AF=0.003202;SB=1132;DP4=36776,100042,368,111;INDEL;HRUN=3",Indel,0.003202
3049,28s,C,CCA,351,PASS,"DP=149575;AF=0.001451;SB=228;DP4=36776,100042,129,88;INDEL;HRUN=3",Indel,0.001451
3049,28s,C,CCTCT,19895,PASS,"DP=149575;AF=0.007829;SB=42;DP4=36776,100042,254,917;INDEL;HRUN=3",Indel,0.007829
3049,28s,CCTCT,C,11722,PASS,"DP=149575;AF=0.005168;SB=8;DP4=39215,107606,188,585;INDEL;HRUN=3",Indel,0.005168
3049,28s,CCT,C,49314,PASS,"DP=149575;AF=0.019468;SB=9;DP4=39215,107606,740,2172;INDEL;HRUN=3",Indel,0.019468
3051,28s,T,TCG,328,PASS,"DP=146396;AF=0.001790;SB=384;DP4=37576,109517,168,94;INDEL;HRUN=1",Indel,0.00179
3051,28s,T,TCA,135,PASS,"DP=146396;AF=0.000772;SB=21;DP4=37576,109517,42,71;INDEL;HRUN=1",Indel,0.000772
3053,28s,T,TCA,153,PASS,"DP=145206;AF=0.000689;SB=18;DP4=37602,108510,37,63;INDEL;HRUN=1",Indel,0.000689
3053,28s,T,TCG,253,PASS,"DP=145206;AF=0.001178;SB=157;DP4=37602,108510,95,76;INDEL;HRUN=1",Indel,0.001178
3055,28s,T,TCG,251,PASS,"DP=144419;AF=0.001025;SB=70;DP4=37579,107764,69,79;INDEL;HRUN=1",Indel,0.001025
3055,28s,T,TCA,70,PASS,"DP=144419;AF=0.000471;SB=22;DP4=37579,107764,28,40;INDEL;HRUN=1",Indel,0.000471
3057,28s,T,TCG,202,PASS,"DP=143900;AF=0.000806;SB=28;DP4=37934,106899,46,70;INDEL;HRUN=1",Indel,0.000806
3057,28s,T,TCA,84,PASS,"DP=143900;AF=0.000452;SB=3;DP4=37934,106899,20,45;INDEL;HRUN=1",Indel,0.000452
3059,28s,T,TCG,108,PASS,"DP=143166;AF=0.000566;SB=19;DP4=38157,106062,32,49;INDEL;HRUN=1",Indel,0.000566
3061,28s,T,TCG,301,PASS,"DP=142768;AF=0.000806;SB=0;DP4=38744,105094,31,84;INDEL;HRUN=1",Indel,0.000806
3063,28s,T,TCA,69,PASS,"DP=142175;AF=0.000338;SB=1;DP4=39177,104010,14,34;INDEL;HRUN=1",Indel,0.000338
3063,28s,T,TCG,345,PASS,"DP=142175;AF=0.000872;SB=0;DP4=39177,104010,34,90;INDEL;HRUN=1",Indel,0.000872
3065,28s,T,TCG,785,PASS,"DP=141897;AF=0.001388;SB=98;DP4=39939,102877,18,179;INDEL;HRUN=5",Indel,0.001388
3066,28s,C,CT,81,PASS,"DP=142684;AF=0.000932;SB=123;DP4=40404,103218,5,128;INDEL;HRUN=5",Indel,0.000932
3071,28s,G,C,1716,PASS,"DP=141804;AF=0.010543;SB=2796;DP4=40726,99426,1109,387",Substitution,0.010543
3073,28s,T,G,1360,PASS,"DP=141665;AF=0.027360;SB=1921;DP4=37888,92971,3044,3453",Substitution,0.02736
3078,28s,G,C,94,PASS,"DP=141429;AF=0.009022;SB=2586;DP4=43252,96685,1018,301",Substitution,0.009022
3079,28s,T,G,10438,PASS,"DP=141263;AF=0.054296;SB=2147483647;DP4=38920,91620,4775,3187",Substitution,0.054296
3082,28s,T,G,1721,PASS,"DP=141824;AF=0.030538;SB=3;DP4=41045,89258,1923,4097",Substitution,0.030538
3086,28s,C,T,594,PASS,"DP=142697;AF=0.006440;SB=0;DP4=46069,95401,303,616",Substitution,0.00644
3089,28s,T,G,5907,PASS,"DP=142594;AF=0.048733;SB=241;DP4=40953,85266,2528,6722",Substitution,0.048733
3099,28s,A,C,2258,PASS,"DP=140340;AF=0.022445;SB=2147483647;DP4=44269,88563,2965,1314",Substitution,0.022445
3106,28s,C,G,3745,PASS,"DP=139714;AF=0.014415;SB=430;DP4=51101,86429,460,1568",Substitution,0.014415
3108,28s,T,G,41746,PASS,"DP=140077;AF=0.102672;SB=2147483647;DP4=42399,82372,9502,4979",Substitution,0.102672
3114,28s,C,G,2925,PASS,"DP=137655;AF=0.013243;SB=24;DP4=51527,84133,633,1192",Substitution,0.013243
3117,28s,C,G,3319,PASS,"DP=135724;AF=0.014898;SB=180;DP4=51721,81837,592,1433",Substitution,0.014898
3120,28s,C,CG,29056,PASS,"DP=133142;AF=0.016516;SB=2;DP4=52008,80044,853,1346;INDEL;HRUN=6",Indel,0.016516
3120,28s,C,G,9540,PASS,"DP=134349;AF=0.026290;SB=239;DP4=51743,78891,1102,2433",Substitution,0.02629
3125,28s,G,GGC,1690,PASS,"DP=131704;AF=0.002430;SB=321;DP4=49785,73534,235,85;INDEL;HRUN=6",Indel,0.00243
3125,28s,G,GGT,78,PASS,"DP=131704;AF=0.000357;SB=12;DP4=49785,73534,26,21;INDEL;HRUN=6",Indel,0.000357
3125,28s,G,GGA,49314,PASS,"DP=131704;AF=0.068221;SB=125;DP4=49785,73534,3277,5708;INDEL;HRUN=6",Indel,0.068221
3125,28s,G,GA,89,PASS,"DP=131704;AF=0.000509;SB=5;DP4=49785,73534,32,35;INDEL;HRUN=6",Indel,0.000509
3126,28s,G,GAGA,281,PASS,"DP=130287;AF=0.000461;SB=0;DP4=53329,78780,24,36;INDEL;HRUN=1",Indel,0.000461
3127,28s,A,AGC,736,PASS,"DP=129896;AF=0.001085;SB=99;DP4=52526,78148,95,46;INDEL;HRUN=1",Indel,0.001085
3127,28s,A,AGT,209,PASS,"DP=129896;AF=0.000454;SB=14;DP4=52526,78148,32,27;INDEL;HRUN=1",Indel,0.000454
3127,28s,A,AGG,95,PASS,"DP=129896;AF=0.000346;SB=159;DP4=52526,78148,44,1;INDEL;HRUN=1",Indel,0.000346
3129,28s,A,AGC,339,PASS,"DP=129035;AF=0.000682;SB=29;DP4=52535,77469,51,37;INDEL;HRUN=2",Indel,0.000682
3129,28s,A,AGT,80,PASS,"DP=129035;AF=0.000302;SB=20;DP4=52535,77469,24,15;INDEL;HRUN=2",Indel,0.000302
3130,28s,A,C,4400,PASS,"DP=129775;AF=0.037365;SB=46;DP4=47706,67597,3967,6146",Substitution,0.037365
3134,28s,T,G,9787,PASS,"DP=129151;AF=0.050398;SB=1656;DP4=48836,72785,3752,2771",Substitution,0.050398
3135,28s,C,G,3822,PASS,"DP=129248;AF=0.018120;SB=1516;DP4=52627,74100,378,1966",Substitution,0.01812
3139,28s,GCGGCAGGGGC,G,215,PASS,"DP=126484;AF=0.000459;SB=1;DP4=53021,74561,23,35;INDEL;HRUN=1",Indel,0.000459
3140,28s,C,G,843,PASS,"DP=127290;AF=0.009176;SB=261;DP4=52636,73267,312,860",Substitution,0.009176
3144,28s,A,T,2223,PASS,"DP=126074;AF=0.031347;SB=1948;DP4=49383,63338,824,3128",Substitution,0.031347
3148,28s,GCCGGCGGCGGCCGCCGCGGGGCC,G,237,PASS,"DP=123512;AF=0.000429;SB=3;DP4=52458,72080,25,28;INDEL;HRUN=2",Indel,0.000429
3153,28s,CGGCGGCCGCCGCGGGGCCCCGGCGGCGGG,C,378,PASS,"DP=120806;AF=0.000563;SB=14;DP4=52273,69584,38,30;INDEL;HRUN=2",Indel,0.000563
3156,28s,C,CG,12935,PASS,"DP=117768;AF=0.010190;SB=2147483647;DP4=50615,67233,1188,12;INDEL;HRUN=2",Indel,0.01019
3156,28s,CGG,C,1044,PASS,"DP=117768;AF=0.010173;SB=126;DP4=51423,66449,397,801;INDEL;HRUN=2",Indel,0.010173
3156,28s,CGGCCGCCGCGGGGCCCCGGCGGCGGG,C,78,PASS,"DP=117768;AF=0.000246;SB=0;DP4=51423,66449,13,16;INDEL;HRUN=2",Indel,0.000246
3158,28s,G,GC,49314,PASS,"DP=116391;AF=0.612135;SB=775;DP4=21944,24547,29679,41568;INDEL;HRUN=2",Indel,0.612135
3158,28s,G,GA,230,PASS,"DP=116391;AF=0.000653;SB=35;DP4=21944,24547,52,24;INDEL;HRUN=2",Indel,0.000653
3158,28s,GCCGCCGCGGGGC,G,6665,PASS,"DP=116391;AF=0.004210;SB=10;DP4=51431,65903,234,256;INDEL;HRUN=2",Indel,0.00421
3159,28s,C,CG,5474,PASS,"DP=116658;AF=0.008666;SB=2147483647;DP4=50511,66380,987,24;INDEL;HRUN=2",Indel,0.008666
3159,28s,C,CA,256,PASS,"DP=116658;AF=0.000617;SB=140;DP4=50511,66380,63,9;INDEL;HRUN=2",Indel,0.000617
3160,28s,C,CG,1198,PASS,"DP=114759;AF=0.001882;SB=127;DP4=51094,66071,148,68;INDEL;HRUN=1",Indel,0.001882
3160,28s,C,CT,112,PASS,"DP=114759;AF=0.000305;SB=10;DP4=51094,66071,10,25;INDEL;HRUN=1",Indel,0.000305
3160,28s,C,CA,168,PASS,"DP=114759;AF=0.000471;SB=51;DP4=51094,66071,40,14;INDEL;HRUN=1",Indel,0.000471
3161,28s,G,GC,75,PASS,"DP=114607;AF=0.000279;SB=55;DP4=50526,65089,27,5;INDEL;HRUN=2",Indel,0.000279
3161,28s,G,C,4756,PASS,"DP=115653;AF=0.026580;SB=1965;DP4=48006,63761,2156,920",Substitution,0.02658
3165,28s,C,G,2558,PASS,"DP=116331;AF=0.016513;SB=468;DP4=50710,62812,561,1401",Substitution,0.016513
3176,28s,C,G,4169,PASS,"DP=115862;AF=0.019825;SB=6;DP4=51700,61534,1093,1235",Substitution,0.019825
3179,28s,C,G,6275,PASS,"DP=115858;AF=0.022571;SB=347;DP4=52455,60486,903,1726",Substitution,0.022571
3186,28s,A,C,30598,PASS,"DP=113639;AF=0.110200;SB=2147483647;DP4=42065,56498,9254,3464",Substitution,0.1102
3190,28s,T,G,21544,PASS,"DP=113439;AF=0.086372;SB=2147483647;DP4=46363,54524,7115,2806",Substitution,0.086372
3197,28s,C,G,334,PASS,"DP=113190;AF=0.007845;SB=445;DP4=55520,56405,242,669",Substitution,0.007845
3199,28s,A,C,14006,PASS,"DP=114329;AF=0.063545;SB=2774;DP4=48180,50214,6752,3255",Substitution,0.063545
3216,28s,C,CG,470,PASS,"DP=118328;AF=0.001386;SB=36;DP4=61664,57279,61,103;INDEL;HRUN=6",Indel,0.001386
3227,28s,C,G,1433,PASS,"DP=120265;AF=0.012073;SB=737;DP4=63509,55168,431,1022",Substitution,0.012073
3230,28s,C,G,1781,PASS,"DP=121067;AF=0.013827;SB=250;DP4=64414,54824,690,987",Substitution,0.013827
3233,28s,C,G,670,PASS,"DP=122206;AF=0.008936;SB=395;DP4=66194,54745,379,715",Substitution,0.008936
3238,28s,A,C,5254,PASS,"DP=123362;AF=0.039113;SB=573;DP4=63249,52694,3217,1648",Substitution,0.039113
3240,28s,T,A,857,PASS,"DP=124170;AF=0.014271;SB=362;DP4=62604,54291,1214,558",Substitution,0.014271
3242,28s,T,G,945,PASS,"DP=125468;AF=0.018196;SB=71;DP4=66322,53634,2030,1954",Substitution,0.018196
3245,28s,A,C,608,PASS,"DP=126785;AF=0.021469;SB=322;DP4=67698,53983,1215,1539",Substitution,0.021469
3248,28s,C,G,205,PASS,"DP=128208;AF=0.004516;SB=871;DP4=71776,55684,94,485",Substitution,0.004516
3250,28s,A,C,407,PASS,"DP=129912;AF=0.015749;SB=1216;DP4=70595,52603,1588,2515",Substitution,0.015749
3260,28s,T,G,6682,PASS,"DP=134389;AF=0.032666;SB=660;DP4=72660,52502,3519,3850",Substitution,0.032666
3261,28s,T,G,1535,PASS,"DP=134754;AF=0.021090;SB=1305;DP4=76297,53962,1016,1836",Substitution,0.02109
3266,28s,T,G,5074,PASS,"DP=137489;AF=0.036956;SB=485;DP4=77164,53748,2536,2683",Substitution,0.036956
3269,28s,A,C,1664,PASS,"DP=138143;AF=0.026292;SB=1769;DP4=78722,53505,1377,2418",Substitution,0.026292
3270,28s,T,G,753,PASS,"DP=138514;AF=0.019558;SB=139;DP4=79410,54744,1457,1351",Substitution,0.019558
3277,28s,A,C,1379,PASS,"DP=142987;AF=0.019561;SB=2147483647;DP4=82795,52125,1937,4163",Substitution,0.019561
3278,28s,G,C,165,PASS,"DP=143048;AF=0.006362;SB=12;DP4=84646,57152,584,345",Substitution,0.006362
3280,28s,T,G,407,PASS,"DP=144059;AF=0.017750;SB=1029;DP4=83596,54177,1760,2281",Substitution,0.01775
3291,28s,T,G,4394,PASS,"DP=146839;AF=0.034344;SB=698;DP4=87564,51851,2542,2512",Substitution,0.034344
3292,28s,C,G,393,PASS,"DP=147044;AF=0.006651;SB=1773;DP4=90216,55483,171,807",Substitution,0.006651
3299,28s,G,C,345,PASS,"DP=150196;AF=0.006951;SB=1518;DP4=94139,54666,243,804",Substitution,0.006951
3305,28s,G,C,65,PASS,"DP=153156;AF=0.006928;SB=286;DP4=95815,55715,1010,288",Substitution,0.006928
3309,28s,A,C,1767,PASS,"DP=153187;AF=0.021307;SB=2147483647;DP4=94025,48967,1848,5233",Substitution,0.021307
3320,28s,C,G,2053,PASS,"DP=151356;AF=0.010109;SB=1653;DP4=94540,55116,434,1096",Substitution,0.010109
3328,28s,C,CGGG,221,PASS,"DP=148720;AF=0.000746;SB=228;DP4=91633,56391,111,0;INDEL;HRUN=1",Indel,0.000746
3328,28s,C,CG,930,PASS,"DP=148720;AF=0.002111;SB=7;DP4=91633,56391,206,108;INDEL;HRUN=1",Indel,0.002111
3328,28s,C,CGG,3635,PASS,"DP=148720;AF=0.008661;SB=2666;DP4=91633,56391,1288,0;INDEL;HRUN=1",Indel,0.008661
3328,28s,C,CGGGG,62,PASS,"DP=148720;AF=0.000303;SB=91;DP4=91633,56391,45,0;INDEL;HRUN=1",Indel,0.000303
3328,28s,CG,C,173,PASS,"DP=148720;AF=0.003221;SB=1;DP4=93065,56342,293,186;INDEL;HRUN=1",Indel,0.003221
3329,28s,G,GC,49314,PASS,"DP=143678;AF=0.192583;SB=2147483647;DP4=79903,40302,12437,15233;INDEL;HRUN=8",Indel,0.192583
3329,28s,G,GCC,3832,PASS,"DP=143678;AF=0.006438;SB=460;DP4=79903,40302,400,525;INDEL;HRUN=8",Indel,0.006438
3329,28s,G,GCCC,1128,PASS,"DP=143678;AF=0.003271;SB=1751;DP4=79903,40302,24,446;INDEL;HRUN=8",Indel,0.003271
3332,28s,CCCCCCA,C,3926,PASS,"DP=145520;AF=0.002728;SB=10;DP4=87793,57830,256,141;INDEL;HRUN=8",Indel,0.002728
3333,28s,CCCCCA,C,49314,PASS,"DP=146067;AF=0.037640;SB=27;DP4=84936,56094,3426,2072;INDEL;HRUN=8",Indel,0.03764
3334,28s,CCCCA,C,49314,PASS,"DP=146628;AF=0.127875;SB=26;DP4=77692,50924,11106,7644;INDEL;HRUN=8",Indel,0.127875
3335,28s,CCCA,C,49314,PASS,"DP=147193;AF=0.031584;SB=2147483647;DP4=88832,54447,144,4505;INDEL;HRUN=8",Indel,0.031584
3336,28s,CCA,C,9574,PASS,"DP=147782;AF=0.005745;SB=2209;DP4=89136,58562,72,777;INDEL;HRUN=8",Indel,0.005745
3344,28s,A,C,49314,PASS,"DP=126280;AF=0.173717;SB=2147483647;DP4=47697,56022,15717,6232",Substitution,0.173717
3349,28s,A,C,36086,PASS,"DP=126115;AF=0.123641;SB=97;DP4=47091,50648,7954,7665",Substitution,0.123641
3349,28s,A,G,49314,PASS,"DP=126115;AF=0.082663;SB=1275;DP4=47091,50648,7210,4851",Substitution,0.082663
3354,28s,T,A,3621,PASS,"DP=125297;AF=0.037160;SB=2147483647;DP4=47835,59972,3546,1110",Substitution,0.03716
3356,28s,G,C,535,PASS,"DP=126939;AF=0.014716;SB=1253;DP4=61989,62694,1453,442",Substitution,0.014716
3359,28s,G,C,478,PASS,"DP=129482;AF=0.009013;SB=1140;DP4=64913,63251,966,202",Substitution,0.009013
3367,28s,G,C,526,PASS,"DP=136496;AF=0.011744;SB=1386;DP4=71856,62824,1368,282",Substitution,0.011744
3368,28s,T,G,43434,PASS,"DP=136730;AF=0.103240;SB=2147483647;DP4=61269,59127,11774,2847",Substitution,0.10324
3373,28s,T,G,7473,PASS,"DP=140977;AF=0.046837;SB=2147483647;DP4=60945,57447,13044,4896",Substitution,0.046837
3378,28s,G,A,100,PASS,"DP=141541;AF=0.003617;SB=144;DP4=78322,62385,196,316",Substitution,0.003617
3379,28s,C,CG,15894,PASS,"DP=140873;AF=0.007759;SB=128;DP4=78204,62505,728,365;INDEL;HRUN=4",Indel,0.007759
3379,28s,C,G,6937,PASS,"DP=141802;AF=0.022658;SB=1974;DP4=76278,62159,2589,624",Substitution,0.022658
3384,28s,A,C,49314,PASS,"DP=141715;AF=0.036418;SB=2147483647;DP4=66327,59728,4935,1314",Substitution,0.036418
3386,28s,C,G,248,PASS,"DP=140214;AF=0.007631;SB=37;DP4=77855,60902,664,410",Substitution,0.007631
3387,28s,GGTC,G,3157,PASS,"DP=138891;AF=0.008568;SB=1779;DP4=77574,61075,1107,83;INDEL;HRUN=2",Indel,0.008568
3390,28s,CGGG,C,133,PASS,"DP=136313;AF=0.001614;SB=0;DP4=77464,59759,126,94;INDEL;HRUN=3",Indel,0.001614
3391,28s,GGGC,G,49314,PASS,"DP=135480;AF=0.806901;SB=188;DP4=14617,12362,62567,46752;INDEL;HRUN=3",Indel,0.806901
3391,28s,GGGCGGC,G,390,PASS,"DP=135480;AF=0.000672;SB=3;DP4=14617,12362,53,38;INDEL;HRUN=3",Indel,0.000672
3394,28s,C,CG,96,PASS,"DP=134068;AF=0.000641;SB=17;DP4=77108,57776,38,48;INDEL;HRUN=2",Indel,0.000641
3396,28s,GCGGCGGCGGT,G,1526,PASS,"DP=138761;AF=0.001499;SB=2;DP4=80678,58596,117,91;INDEL;HRUN=1",Indel,0.001499
3400,28s,C,CG,864,PASS,"DP=139076;AF=0.001150;SB=320;DP4=81352,58521,157,3;INDEL;HRUN=2",Indel,0.00115
3402,28s,G,GT,5275,PASS,"DP=134730;AF=0.003978;SB=305;DP4=81551,57623,180,356;INDEL;HRUN=1",Indel,0.003978
3403,28s,CGGT,C,1999,PASS,"DP=134777;AF=0.004511;SB=1807;DP4=79360,55643,28,580;INDEL;HRUN=2",Indel,0.004511
3404,28s,GGTC,G,1702,PASS,"DP=136054;AF=0.003080;SB=167;DP4=79759,55939,329,90;INDEL;HRUN=2",Indel,0.00308
3406,28s,T,G,26673,PASS,"DP=136913;AF=0.083243;SB=2147483647;DP4=70340,52921,9557,1841",Substitution,0.083243
3410,28s,C,G,295,PASS,"DP=140126;AF=0.009242;SB=89;DP4=81834,56880,656,641",Substitution,0.009242
3414,28s,CGGCGG,C,895,PASS,"DP=139705;AF=0.001074;SB=17;DP4=82878,57498,74,76;INDEL;HRUN=2",Indel,0.001074
3414,28s,C,G,1132,PASS,"DP=140528;AF=0.011073;SB=1;DP4=81328,56347,927,629",Substitution,0.011073
3414,28s,C,T,252,PASS,"DP=140528;AF=0.008340;SB=14;DP4=81328,56347,656,516",Substitution,0.00834
3417,28s,C,G,641,PASS,"DP=139878;AF=0.009144;SB=76;DP4=81920,56411,658,621",Substitution,0.009144
3422,28s,C,G,1814,PASS,"DP=137603;AF=0.013859;SB=416;DP4=79835,55655,1411,496",Substitution,0.013859
3427,28s,C,G,469,PASS,"DP=133629;AF=0.008995;SB=433;DP4=77336,54967,933,269",Substitution,0.008995
3430,28s,T,G,13730,PASS,"DP=128904;AF=0.060083;SB=1929;DP4=68222,51913,5698,2049",Substitution,0.060083
3434,28s,T,TG,11517,PASS,"DP=125311;AF=0.031984;SB=2147483647;DP4=66068,54563,4008,0;INDEL;HRUN=6",Indel,0.031984
3434,28s,T,TC,1880,PASS,"DP=125311;AF=0.008283;SB=2616;DP4=66068,54563,1035,3;INDEL;HRUN=6",Indel,0.008283
3434,28s,T,TA,121,PASS,"DP=125311;AF=0.002729;SB=891;DP4=66068,54563,342,0;INDEL;HRUN=6",Indel,0.002729
3434,28s,T,G,432,PASS,"DP=126278;AF=0.023923;SB=1752;DP4=70615,51347,968,2053",Substitution,0.023923
3441,28s,G,GC,279,PASS,"DP=107530;AF=0.001823;SB=565;DP4=52845,55421,194,2;INDEL;HRUN=3",Indel,0.001823
3444,28s,C,CA,241,PASS,"DP=107295;AF=0.009712;SB=2147483647;DP4=52194,55423,1042,0;INDEL;HRUN=1",Indel,0.009712
3446,28s,A,AC,6132,PASS,"DP=108059;AF=0.016241;SB=2575;DP4=51316,55480,1531,224;INDEL;HRUN=7",Indel,0.016241
3446,28s,AC,A,132,PASS,"DP=108059;AF=0.001101;SB=36;DP4=52990,55616,38,81;INDEL;HRUN=7",Indel,0.001101
3458,28s,CCGT,C,68,PASS,"DP=103247;AF=0.001133;SB=401;DP4=47019,56609,117,0;INDEL;HRUN=4",Indel,0.001133
3464,28s,G,GC,2293,PASS,"DP=96611;AF=0.003913;SB=30;DP4=40139,56494,125,253;INDEL;HRUN=6",Indel,0.003913
3472,28s,T,G,23380,PASS,"DP=99147;AF=0.112500;SB=2924;DP4=32239,50890,8130,6655",Substitution,0.1125
3473,28s,TC,T,362,PASS,"DP=99761;AF=0.001363;SB=12;DP4=42006,58042,46,90;INDEL;HRUN=6",Indel,0.001363
3473,28s,T,G,385,PASS,"DP=100185;AF=0.037161;SB=12;DP4=38999,55087,1607,2131",Substitution,0.037161
3479,28s,CT,C,151,PASS,"DP=103064;AF=0.004599;SB=1645;DP4=44674,59876,470,4;INDEL;HRUN=1",Indel,0.004599
3480,28s,T,C,49314,PASS,"DP=104284;AF=0.027435;SB=2147483647;DP4=30594,57758,2260,610",Substitution,0.027435
3491,28s,GCGCGGC,G,73,PASS,"DP=108910;AF=0.000863;SB=15;DP4=48767,60244,53,41;INDEL;HRUN=1",Indel,0.000863
3492,28s,C,CGCG,9218,PASS,"DP=110009;AF=0.005963;SB=11;DP4=49404,60179,319,337;INDEL;HRUN=1",Indel,0.005963
3492,28s,CGCGGCG,C,49314,PASS,"DP=110009;AF=0.226409;SB=1250;DP4=32279,42825,12871,12036;INDEL;HRUN=1",Indel,0.226409
3492,28s,CGCG,C,49314,PASS,"DP=110009;AF=0.093556;SB=31;DP4=32279,42825,4606,5686;INDEL;HRUN=1",Indel,0.093556
3492,28s,CGCGGCGGCG,C,1554,PASS,"DP=110009;AF=0.001718;SB=2;DP4=32279,42825,86,103;INDEL;HRUN=1",Indel,0.001718
3494,28s,CG,C,203,PASS,"DP=111263;AF=0.002229;SB=18;DP4=50595,60815,93,155;INDEL;HRUN=2",Indel,0.002229
3498,28s,G,GGCGC,20647,PASS,"DP=113958;AF=0.010767;SB=23;DP4=51687,60855,614,613;INDEL;HRUN=2",Indel,0.010767
3498,28s,G,GC,12289,PASS,"DP=113958;AF=0.008029;SB=5;DP4=51687,60855,403,512;INDEL;HRUN=2",Indel,0.008029
3500,28s,CGGCGGCGGCGGCG,C,184,PASS,"DP=116198;AF=0.000499;SB=8;DP4=53920,63007,21,37;INDEL;HRUN=2",Indel,0.000499
3501,28s,G,GC,622,PASS,"DP=117222;AF=0.001109;SB=0;DP4=54759,62984,59,71;INDEL;HRUN=2",Indel,0.001109
3505,28s,G,GC,471,PASS,"DP=119221;AF=0.001577;SB=450;DP4=56159,63515,178,10;INDEL;HRUN=1",Indel,0.001577
3506,28s,C,CA,30187,PASS,"DP=119660;AF=0.017458;SB=45;DP4=54933,61863,886,1203;INDEL;HRUN=2",Indel,0.017458
3506,28s,C,CG,6387,PASS,"DP=119660;AF=0.005073;SB=81;DP4=54933,61863,357,250;INDEL;HRUN=2",Indel,0.005073
3506,28s,C,CGGCA,13166,PASS,"DP=119660;AF=0.007555;SB=1;DP4=54933,61863,419,485;INDEL;HRUN=2",Indel,0.007555
3507,28s,GGC,G,191,PASS,"DP=120675;AF=0.001450;SB=44;DP4=57127,63978,110,65;INDEL;HRUN=2",Indel,0.00145
3508,28s,G,GT,190,PASS,"DP=119882;AF=0.000509;SB=74;DP4=57250,64178,50,11;INDEL;HRUN=1",Indel,0.000509
3509,28s,C,CA,1275,PASS,"DP=120339;AF=0.001720;SB=121;DP4=56809,64144,47,160;INDEL;HRUN=2",Indel,0.00172
3513,28s,G,GGCA,49314,PASS,"DP=123819;AF=0.204032;SB=285;DP4=46824,51187,11071,14192;INDEL;HRUN=3",Indel,0.204032
3513,28s,G,GGCC,1341,PASS,"DP=123819;AF=0.004232;SB=15;DP4=46824,51187,276,248;INDEL;HRUN=3",Indel,0.004232
3513,28s,G,GGGA,62,PASS,"DP=123819;AF=0.000372;SB=38;DP4=46824,51187,35,11;INDEL;HRUN=3",Indel,0.000372
3513,28s,G,GGCGGCA,2459,PASS,"DP=123819;AF=0.002302;SB=17;DP4=46824,51187,116,169;INDEL;HRUN=3",Indel,0.002302
3513,28s,G,GGCT,384,PASS,"DP=123819;AF=0.001123;SB=15;DP4=46824,51187,53,86;INDEL;HRUN=3",Indel,0.001123
3513,28s,G,GGCGGCGGCA,164,PASS,"DP=123819;AF=0.000452;SB=0;DP4=46824,51187,27,29;INDEL;HRUN=3",Indel,0.000452
3513,28s,G,A,49314,PASS,"DP=124440;AF=0.429878;SB=239;DP4=32626,35310,24109,29385",Substitution,0.429878
3514,28s,G,GCAT,390,PASS,"DP=123752;AF=0.000719;SB=7;DP4=58647,66501,35,54;INDEL;HRUN=3",Indel,0.000719
3519,28s,C,CGGA,307,PASS,"DP=130128;AF=0.000569;SB=5;DP4=60075,70363,39,35;INDEL;HRUN=2",Indel,0.000569
3522,28s,A,AG,923,PASS,"DP=132547;AF=0.001079;SB=6;DP4=61761,71038,74,69;INDEL;HRUN=4",Indel,0.001079
3538,28s,T,TC,835,PASS,"DP=142576;AF=0.001978;SB=4;DP4=68168,74493,143,139;INDEL;HRUN=7",Indel,0.001978
3538,28s,T,G,6424,PASS,"DP=142958;AF=0.030436;SB=2147483647;DP4=64550,73181,3430,925",Substitution,0.030436
3539,28s,C,T,4978,PASS,"DP=143655;AF=0.016435;SB=2;DP4=67158,73611,1139,1222",Substitution,0.016435
3571,28s,T,G,10070,PASS,"DP=166781;AF=0.044729;SB=1845;DP4=77447,81577,4910,2556",Substitution,0.044729
3580,28s,GCGCCT,G,1232,PASS,"DP=172798;AF=0.000856;SB=2;DP4=85992,87066,70,78;INDEL;HRUN=1",Indel,0.000856
3598,28s,C,T,582,PASS,"DP=187206;AF=0.003862;SB=103;DP4=91362,94920,266,457",Substitution,0.003862
3601,28s,C,T,311,PASS,"DP=188989;AF=0.003953;SB=108;DP4=91827,96195,273,474",Substitution,0.003953
3613,28s,T,TTA,5091,PASS,"DP=191167;AF=0.002307;SB=11;DP4=90107,101791,188,253;INDEL;HRUN=2",Indel,0.002307
3613,28s,T,A,122,PASS,"DP=192340;AF=0.006275;SB=273;DP4=86943,101413,748,459",Substitution,0.006275
3618,28s,A,C,63,PASS,"DP=193805;AF=0.009731;SB=628;DP4=89272,102255,521,1367",Substitution,0.009731
3621,28s,G,GT,1468,PASS,"DP=192304;AF=0.002387;SB=9;DP4=89141,103954,194,265;INDEL;HRUN=2",Indel,0.002387
3625,28s,CGG,C,1623,PASS,"DP=191902;AF=0.002496;SB=9;DP4=88378,104436,202,277;INDEL;HRUN=2",Indel,0.002496
3625,28s,C,T,3204,PASS,"DP=193294;AF=0.007884;SB=58;DP4=87806,103649,605,919",Substitution,0.007884
3627,28s,G,C,4672,PASS,"DP=193501;AF=0.008269;SB=74;DP4=88179,103087,628,972",Substitution,0.008269
3637,28s,A,C,817,PASS,"DP=196483;AF=0.016775;SB=2147483647;DP4=86937,105910,2615,690",Substitution,0.016775
3641,28s,G,A,128,PASS,"DP=197747;AF=0.003484;SB=5;DP4=90321,106233,302,387",Substitution,0.003484
3646,28s,TTTAA,T,10748,PASS,"DP=199143;AF=0.004308;SB=24;DP4=92807,106657,357,501;INDEL;HRUN=3",Indel,0.004308
3648,28s,TAATTA,T,44096,PASS,"DP=199621;AF=0.012013;SB=81;DP4=92680,105666,979,1419;INDEL;HRUN=2",Indel,0.012013
3676,28s,G,A,49314,PASS,"DP=214693;AF=0.004686;SB=11;DP4=103560,107419,523,483",Substitution,0.004686
3676,28s,G,T,10546,PASS,"DP=214693;AF=0.011444;SB=67;DP4=103560,107419,1076,1381",Substitution,0.011444
3677,28s,C,T,4029,PASS,"DP=215044;AF=0.007054;SB=16;DP4=104781,108463,701,816",Substitution,0.007054
3680,28s,C,G,10754,PASS,"DP=216160;AF=0.011570;SB=104;DP4=104858,107660,1068,1433",Substitution,0.01157
3680,28s,C,T,49314,PASS,"DP=216160;AF=0.004511;SB=4;DP4=104858,107660,465,510",Substitution,0.004511
3684,28s,T,G,2353,PASS,"DP=217808;AF=0.015858;SB=1806;DP4=104141,109950,2517,937",Substitution,0.015858
3686,28s,T,G,860,PASS,"DP=217092;AF=0.010489;SB=992;DP4=103778,109979,1609,669",Substitution,0.010489
3687,28s,TGAC,T,31551,PASS,"DP=216355;AF=0.009461;SB=44;DP4=105356,110227,906,1141;INDEL;HRUN=1",Indel,0.009461
3687,28s,T,G,264,PASS,"DP=217630;AF=0.008018;SB=248;DP4=104568,110518,1068,678",Substitution,0.008018
3690,28s,C,T,3043,PASS,"DP=218351;AF=0.006929;SB=53;DP4=104909,109683,829,684",Substitution,0.006929
3692,28s,C,T,7785,PASS,"DP=218327;AF=0.009678;SB=24;DP4=106004,109969,1104,1009",Substitution,0.009678
3693,28s,G,A,8232,PASS,"DP=218798;AF=0.011120;SB=71;DP4=106216,109050,1067,1366",Substitution,0.01112
3693,28s,G,C,49314,PASS,"DP=218798;AF=0.003711;SB=69;DP4=106216,109050,476,336",Substitution,0.003711
3695,28s,T,A,3749,PASS,"DP=220608;AF=0.012003;SB=65;DP4=106794,110035,1437,1211",Substitution,0.012003
3705,28s,G,A,3601,PASS,"DP=222192;AF=0.006647;SB=20;DP4=109169,111297,681,796",Substitution,0.006647
3708,28s,C,A,235,PASS,"DP=224043;AF=0.004455;SB=15;DP4=110200,112731,458,540",Substitution,0.004455
3710,28s,G,T,408,PASS,"DP=223798;AF=0.004366;SB=50;DP4=110046,112636,413,564",Substitution,0.004366
3711,28s,T,G,121,PASS,"DP=223775;AF=0.005376;SB=129;DP4=109667,112575,465,738",Substitution,0.005376
3712,28s,G,A,610,PASS,"DP=223736;AF=0.003692;SB=2;DP4=110277,112360,417,409",Substitution,0.003692
3727,28s,G,A,22380,PASS,"DP=225070;AF=0.019536;SB=5;DP4=110172,108996,2176,2221",Substitution,0.019536
3727,28s,G,T,49314,PASS,"DP=225070;AF=0.005083;SB=0;DP4=110172,108996,578,566",Substitution,0.005083
3744,28s,A,C,212,PASS,"DP=223797;AF=0.009066;SB=416;DP4=111598,109215,1717,980",Substitution,0.009066
3745,28s,G,A,118,PASS,"DP=222863;AF=0.003127;SB=9;DP4=112251,109511,374,323",Substitution,0.003127
3746,28s,C,G,49314,PASS,"DP=222255;AF=0.006412;SB=9;DP4=110182,107105,752,673",Substitution,0.006412
3746,28s,C,T,17195,PASS,"DP=222255;AF=0.014875;SB=16;DP4=110182,107105,1743,1563",Substitution,0.014875
3747,28s,G,A,39491,PASS,"DP=222118;AF=0.023492;SB=9;DP4=110213,105458,2726,2492",Substitution,0.023492
3747,28s,G,C,49314,PASS,"DP=222118;AF=0.003305;SB=2;DP4=110213,105458,384,350",Substitution,0.003305
3748,28s,CG,C,2745,PASS,"DP=220045;AF=0.001318;SB=2;DP4=113592,107868,154,136;INDEL;HRUN=3",Indel,0.001318
3748,28s,C,T,13774,PASS,"DP=221750;AF=0.013632;SB=19;DP4=111925,106431,1619,1404",Substitution,0.013632
3749,28s,G,A,3858,PASS,"DP=221676;AF=0.007380;SB=12;DP4=112850,106671,879,757",Substitution,0.00738
3755,28s,ACGGCG,A,8922,PASS,"DP=221014;AF=0.003122;SB=1;DP4=113826,108011,348,342;INDEL;HRUN=1",Indel,0.003122
3756,28s,C,CA,779,PASS,"DP=220370;AF=0.001756;SB=11;DP4=113861,108149,217,170;INDEL;HRUN=2",Indel,0.001756
3756,28s,C,T,30459,PASS,"DP=222398;AF=0.021560;SB=14;DP4=111032,105600,2533,2262",Substitution,0.02156
3758,28s,G,GC,5646,PASS,"DP=220457;AF=0.002186;SB=13;DP4=114318,107148,271,211;INDEL;HRUN=1",Indel,0.002186
3758,28s,G,T,567,PASS,"DP=221949;AF=0.003645;SB=0;DP4=113756,106592,417,392",Substitution,0.003645
3759,28s,C,A,562,PASS,"DP=222102;AF=0.004890;SB=6;DP4=113062,105867,580,506",Substitution,0.00489
3759,28s,C,T,1247,PASS,"DP=222102;AF=0.005876;SB=30;DP4=113062,105867,734,571",Substitution,0.005876
3760,28s,G,A,6854,PASS,"DP=221774;AF=0.009478;SB=0;DP4=113140,105597,1086,1016",Substitution,0.009478
3762,28s,G,A,7313,PASS,"DP=221538;AF=0.009398;SB=17;DP4=113057,106191,1129,953",Substitution,0.009398
3768,28s,C,A,435,PASS,"DP=221482;AF=0.003549;SB=14;DP4=114301,105956,378,408",Substitution,0.003549
3773,28s,A,G,5591,PASS,"DP=222135;AF=0.009836;SB=17;DP4=114150,104783,1196,989",Substitution,0.009836
3775,28s,T,A,483,PASS,"DP=222812;AF=0.003770;SB=2;DP4=115603,106104,446,394",Substitution,0.00377
3782,28s,AG,A,9968,PASS,"DP=220645;AF=0.003313;SB=6;DP4=115477,105523,366,365;INDEL;HRUN=2",Indel,0.003313
3783,28s,G,GT,5984,PASS,"DP=220199;AF=0.002257;SB=8;DP4=115679,105558,243,254;INDEL;HRUN=2",Indel,0.002257
3783,28s,G,T,88,PASS,"DP=221734;AF=0.003391;SB=6;DP4=115152,105025,377,375",Substitution,0.003391
3789,28s,C,T,5850,PASS,"DP=220584;AF=0.008881;SB=0;DP4=114908,103452,1030,929",Substitution,0.008881
3796,28s,C,T,2397,PASS,"DP=218897;AF=0.006099;SB=1;DP4=113186,103964,690,645",Substitution,0.006099
3798,28s,C,A,49314,PASS,"DP=218286;AF=0.004233;SB=1;DP4=111329,102987,486,438",Substitution,0.004233
3798,28s,C,T,15396,PASS,"DP=218286;AF=0.013730;SB=7;DP4=111329,102987,1594,1403",Substitution,0.01373
3799,28s,G,A,184,PASS,"DP=217871;AF=0.003323;SB=3;DP4=113154,103744,368,356",Substitution,0.003323
3808,28s,T,C,3993,PASS,"DP=218641;AF=0.014060;SB=18;DP4=111339,102890,1670,1409",Substitution,0.01406
3815,28s,C,T,4638,PASS,"DP=215928;AF=0.008558;SB=3;DP4=110859,102366,978,870",Substitution,0.008558
3817,28s,C,T,32534,PASS,"DP=214605;AF=0.021141;SB=47;DP4=108729,101125,2497,2040",Substitution,0.021141
3818,28s,G,A,4488,PASS,"DP=213588;AF=0.007416;SB=4;DP4=109026,102043,800,784",Substitution,0.007416
3818,28s,G,T,49314,PASS,"DP=213588;AF=0.004176;SB=4;DP4=109026,102043,474,418",Substitution,0.004176
3826,28s,G,T,450,PASS,"DP=214470;AF=0.003702;SB=12;DP4=110125,103484,382,412",Substitution,0.003702
3830,28s,G,A,321,PASS,"DP=213503;AF=0.003152;SB=1;DP4=109355,103271,342,331",Substitution,0.003152
3832,28s,A,AGT,1207,PASS,"DP=211985;AF=0.002717;SB=1;DP4=109214,103599,301,275;INDEL;HRUN=1",Indel,0.002717
3833,28s,C,T,10480,PASS,"DP=213285;AF=0.014516;SB=34;DP4=107596,101809,1691,1405",Substitution,0.014516
3834,28s,G,A,1384,PASS,"DP=213642;AF=0.004924;SB=4;DP4=109777,102546,529,523",Substitution,0.004924
3835,28s,A,G,625,PASS,"DP=213911;AF=0.004016;SB=9;DP4=110196,102539,468,391",Substitution,0.004016
3841,28s,C,T,3965,PASS,"DP=216203;AF=0.008016;SB=7;DP4=110445,103768,923,810",Substitution,0.008016
3843,28s,A,C,7494,PASS,"DP=215541;AF=0.012680;SB=62;DP4=109838,102672,1281,1453",Substitution,0.01268
3848,28s,C,T,332,PASS,"DP=214745;AF=0.003143;SB=13;DP4=110894,102968,323,352",Substitution,0.003143
3849,28s,C,A,837,PASS,"DP=214895;AF=0.004905;SB=16;DP4=110736,103020,583,471",Substitution,0.004905
3853,28s,C,T,446,PASS,"DP=215380;AF=0.004053;SB=12;DP4=111714,102573,483,390",Substitution,0.004053
3854,28s,C,CTACT,34242,PASS,"DP=214206;AF=0.011087;SB=25;DP4=111083,101851,1312,1063;INDEL;HRUN=1",Indel,0.011087
3859,28s,A,C,161,PASS,"DP=215343;AF=0.011758;SB=1025;DP4=111753,100893,798,1754",Substitution,0.011758
3865,28s,C,T,26207,PASS,"DP=212819;AF=0.018565;SB=41;DP4=109174,99482,2193,1758",Substitution,0.018565
3871,28s,C,A,1213,PASS,"DP=213638;AF=0.004662;SB=21;DP4=111178,101000,565,431",Substitution,0.004662
3885,28s,C,G,49314,PASS,"DP=211663;AF=0.003742;SB=6;DP4=107794,98383,433,360",Substitution,0.003742
3885,28s,C,T,28593,PASS,"DP=211663;AF=0.021511;SB=5;DP4=107794,98383,2417,2136",Substitution,0.021511
3886,28s,G,A,226,PASS,"DP=211402;AF=0.003264;SB=36;DP4=110778,99700,412,278",Substitution,0.003264
3888,28s,G,A,561,PASS,"DP=209802;AF=0.003427;SB=3;DP4=109849,98369,389,330",Substitution,0.003427
3888,28s,G,T,826,PASS,"DP=209802;AF=0.003823;SB=18;DP4=109849,98369,458,344",Substitution,0.003823
3889,28s,C,A,49314,PASS,"DP=210032;AF=0.005299;SB=13;DP4=108904,98013,552,561",Substitution,0.005299
3889,28s,C,G,5599,PASS,"DP=210032;AF=0.009303;SB=4;DP4=108904,98013,1049,905",Substitution,0.009303
3894,28s,C,T,34674,PASS,"DP=210495;AF=0.024214;SB=35;DP4=107284,97862,2796,2301",Substitution,0.024214
3898,28s,A,C,286,PASS,"DP=210758;AF=0.013176;SB=1253;DP4=107780,99377,2069,718",Substitution,0.013176
3900,28s,C,T,454,PASS,"DP=211041;AF=0.003360;SB=32;DP4=109453,100683,415,294",Substitution,0.00336
3901,28s,A,C,134,PASS,"DP=211294;AF=0.005556;SB=103;DP4=108913,99537,715,909",Substitution,0.005556
3902,28s,G,T,5032,PASS,"DP=210855;AF=0.007427;SB=6;DP4=109234,99962,794,772",Substitution,0.007427
3903,28s,C,T,19159,PASS,"DP=211055;AF=0.016034;SB=4;DP4=108188,99099,1792,1592",Substitution,0.016034
3904,28s,G,A,2916,PASS,"DP=211361;AF=0.006960;SB=1;DP4=109758,99898,764,707",Substitution,0.00696
3909,28s,A,C,492,PASS,"DP=211172;AF=0.011848;SB=1527;DP4=108409,99446,1947,555",Substitution,0.011848
3910,28s,A,C,76,PASS,"DP=210809;AF=0.004592;SB=28;DP4=109837,99358,720,543",Substitution,0.004592
3916,28s,C,A,5560,PASS,"DP=210179;AF=0.009573;SB=1;DP4=109703,98373,1050,962",Substitution,0.009573
3918,28s,C,T,222,PASS,"DP=210314;AF=0.004175;SB=8;DP4=110100,98985,485,393",Substitution,0.004175
3920,28s,G,GTTGAGC,10405,PASS,"DP=208755;AF=0.003420;SB=48;DP4=110302,99216,434,280;INDEL;HRUN=2",Indel,0.00342
3933,28s,C,G,4244,PASS,"DP=211839;AF=0.009484;SB=6;DP4=109816,99642,1027,982",Substitution,0.009484
3936,28s,G,T,269,PASS,"DP=211869;AF=0.004588;SB=0;DP4=110332,100402,511,461",Substitution,0.004588
3942,28s,C,T,206,PASS,"DP=210661;AF=0.002943;SB=2;DP4=109126,100681,329,291",Substitution,0.002943
3944,28s,C,G,49314,PASS,"DP=211164;AF=0.004565;SB=184;DP4=105855,97716,363,602",Substitution,0.004565
3944,28s,C,T,49269,PASS,"DP=211164;AF=0.030654;SB=3;DP4=105855,97716,3337,3136",Substitution,0.030654
3945,28s,G,A,201,PASS,"DP=211052;AF=0.003786;SB=12;DP4=109112,100803,442,357",Substitution,0.003786
3954,28s,A,C,468,PASS,"DP=208661;AF=0.007155;SB=307;DP4=107424,99314,551,944",Substitution,0.007155
3961,28s,A,T,91,PASS,"DP=207414;AF=0.005149;SB=1393;DP4=107759,96899,166,902",Substitution,0.005149
3962,28s,G,A,967,PASS,"DP=207225;AF=0.005786;SB=11;DP4=107242,98349,658,541",Substitution,0.005786
3963,28s,G,A,641,PASS,"DP=206968;AF=0.005639;SB=11;DP4=107119,98299,640,527",Substitution,0.005639
3970,28s,A,C,76,PASS,"DP=205735;AF=0.010548;SB=61;DP4=105539,97489,1027,1173",Substitution,0.010548
3972,28s,A,C,182,PASS,"DP=206017;AF=0.008791;SB=2296;DP4=106298,97396,282,1532",Substitution,0.008791
3979,28s,A,T,117,PASS,"DP=203765;AF=0.003926;SB=876;DP4=105487,96938,144,656",Substitution,0.003926
3982,28s,C,T,1297,PASS,"DP=201455;AF=0.004577;SB=11;DP4=104219,96062,452,470",Substitution,0.004577
3986,28s,C,T,2103,PASS,"DP=200603;AF=0.006421;SB=67;DP4=104191,94707,580,708",Substitution,0.006421
3987,28s,G,A,162,PASS,"DP=199764;AF=0.003905;SB=5;DP4=104019,94635,393,387",Substitution,0.003905
3989,28s,C,T,2928,PASS,"DP=198700;AF=0.006779;SB=13;DP4=103273,93721,669,678",Substitution,0.006779
3990,28s,G,GC,2776,PASS,"DP=197669;AF=0.002934;SB=7;DP4=104534,94324,321,259;INDEL;HRUN=7",Indel,0.002934
3990,28s,GC,G,4035,PASS,"DP=197669;AF=0.003627;SB=4;DP4=104451,94248,389,328;INDEL;HRUN=7",Indel,0.003627
3996,28s,CCGG,C,6186,PASS,"DP=199431;AF=0.002597;SB=2;DP4=103945,96678,276,242;INDEL;HRUN=7",Indel,0.002597
3997,28s,CGGT,C,7042,PASS,"DP=198436;AF=0.002676;SB=28;DP4=103617,96710,238,293;INDEL;HRUN=2",Indel,0.002676
4008,28s,C,G,590,PASS,"DP=197552;AF=0.004444;SB=223;DP4=100168,96255,303,578",Substitution,0.004444
4014,28s,GC,G,11914,PASS,"DP=197051;AF=0.005039;SB=5;DP4=99250,97976,483,510;INDEL;HRUN=3",Indel,0.005039
4015,28s,C,T,541,PASS,"DP=197579;AF=0.003421;SB=10;DP4=98405,97273,362,314",Substitution,0.003421
4018,28s,G,A,376,PASS,"DP=195502;AF=0.004460;SB=7;DP4=97378,97053,457,415",Substitution,0.00446
4027,28s,TCCGCCGGC,T,71,PASS,"DP=185562;AF=0.000172;SB=1;DP4=95181,94119,15,17;INDEL;HRUN=2",Indel,0.000172
4029,28s,C,T,1882,PASS,"DP=185905;AF=0.006627;SB=12;DP4=91662,92743,646,586",Substitution,0.006627
4037,28s,C,T,419,PASS,"DP=181500;AF=0.005289;SB=43;DP4=90166,89954,417,543",Substitution,0.005289
4040,28s,C,G,2082,PASS,"DP=179406;AF=0.008801;SB=486;DP4=89121,87904,503,1076",Substitution,0.008801
4045,28s,C,T,98,PASS,"DP=176084;AF=0.003527;SB=0;DP4=88987,86144,315,306",Substitution,0.003527
4059,28s,C,T,153,PASS,"DP=170058;AF=0.005363;SB=10;DP4=89758,78908,459,453",Substitution,0.005363
4060,28s,A,C,1811,PASS,"DP=169393;AF=0.024263;SB=461;DP4=87303,77756,2639,1476",Substitution,0.024263
4063,28s,A,C,730,PASS,"DP=168006;AF=0.017446;SB=2756;DP4=89053,75760,638,2299",Substitution,0.017446
4067,28s,T,G,1283,PASS,"DP=167078;AF=0.019518;SB=2147483647;DP4=82493,74913,6160,1914",Substitution,0.019518
4068,28s,G,T,617,PASS,"DP=166484;AF=0.012542;SB=3014;DP4=89688,74254,320,1768",Substitution,0.012542
4072,28s,G,GTTT,3232,PASS,"DP=165313;AF=0.003182;SB=16;DP4=91134,74971,262,264;INDEL;HRUN=6",Indel,0.003182
4080,28s,A,C,547,PASS,"DP=165654;AF=0.014573;SB=3175;DP4=92771,70035,484,2005",Substitution,0.014573
4087,28s,C,T,49314,PASS,"DP=165250;AF=0.011231;SB=153;DP4=94245,65520,920,936",Substitution,0.011231
4090,28s,T,G,963,PASS,"DP=164671;AF=0.017532;SB=38;DP4=94227,67219,1790,1102",Substitution,0.017532
4092,28s,A,T,17143,PASS,"DP=164171;AF=0.046056;SB=2147483647;DP4=92924,56525,2055,5506",Substitution,0.046056
4095,28s,C,CG,72,PASS,"DP=161095;AF=0.000819;SB=8;DP4=95207,66593,86,46;INDEL;HRUN=7",Indel,0.000819
4095,28s,CG,C,4996,PASS,"DP=161095;AF=0.007114;SB=89;DP4=94997,66299,572,574;INDEL;HRUN=7",Indel,0.007114
4095,28s,C,G,42984,PASS,"DP=162442;AF=0.051889;SB=2147483647;DP4=93465,59263,1431,6998",Substitution,0.051889
4096,28s,G,GGGGGC,255,PASS,"DP=164240;AF=0.000530;SB=3;DP4=96568,68803,47,40;INDEL;HRUN=7",Indel,0.00053
4096,28s,G,GGGGGT,292,PASS,"DP=164240;AF=0.000572;SB=3;DP4=96568,68803,59,35;INDEL;HRUN=7",Indel,0.000572
4096,28s,GGGGGGGCGA,G,3299,PASS,"DP=164240;AF=0.002302;SB=139;DP4=96528,68667,146,232;INDEL;HRUN=7",Indel,0.002302
4098,28s,G,GT,7564,PASS,"DP=163844;AF=0.004217;SB=35;DP4=95812,68585,355,336;INDEL;HRUN=7",Indel,0.004217
4103,28s,C,G,543,PASS,"DP=161649;AF=0.008135;SB=332;DP4=92850,65105,553,762",Substitution,0.008135
4103,28s,C,T,2157,PASS,"DP=161649;AF=0.011389;SB=160;DP4=92850,65105,904,937",Substitution,0.011389
4111,28s,G,T,458,PASS,"DP=160924;AF=0.009327;SB=712;DP4=93310,64213,542,959",Substitution,0.009327
4120,28s,T,G,2782,PASS,"DP=158490;AF=0.025314;SB=2147483647;DP4=93247,58047,1505,3770",Substitution,0.025314
4122,28s,G,C,2269,PASS,"DP=157908;AF=0.009461;SB=193;DP4=94784,61305,733,765",Substitution,0.009461
4134,28s,A,C,552,PASS,"DP=160032;AF=0.017309;SB=909;DP4=93661,62960,1133,1662",Substitution,0.017309
4137,28s,C,T,1801,PASS,"DP=162956;AF=0.009303;SB=247;DP4=93412,67407,677,839",Substitution,0.009303
4139,28s,CCCGGCCGCGCG,C,83,PASS,"DP=164075;AF=0.000323;SB=15;DP4=95493,70229,22,31;INDEL;HRUN=3",Indel,0.000323
4142,28s,G,A,107,PASS,"DP=168669;AF=0.006741;SB=118;DP4=94735,71312,529,608",Substitution,0.006741
4144,28s,CCGCGCGCCGGCCGGG,C,4877,PASS,"DP=168887;AF=0.002884;SB=10;DP4=96153,73256,258,229;INDEL;HRUN=2",Indel,0.002884
4146,28s,G,C,167,PASS,"DP=170670;AF=0.008291;SB=268;DP4=96101,71904,623,829",Substitution,0.008291
4159,28s,G,GC,1423,PASS,"DP=177954;AF=0.009132;SB=2147483647;DP4=99531,77899,0,1625;INDEL;HRUN=1",Indel,0.009132
4160,28s,C,T,2179,PASS,"DP=190496;AF=0.014205;SB=40;DP4=98155,89396,1313,1393",Substitution,0.014205
4161,28s,G,GT,1064,PASS,"DP=190029;AF=0.003078;SB=37;DP4=99582,90496,261,324;INDEL;HRUN=1",Indel,0.003078
4169,28s,C,T,1433,PASS,"DP=199510;AF=0.004426;SB=39;DP4=103613,94878,403,480",Substitution,0.004426
4174,28s,G,A,104,PASS,"DP=207489;AF=0.003075;SB=30;DP4=107070,99592,288,350",Substitution,0.003075
4196,28s,TTGAC,T,9269,PASS,"DP=214546;AF=0.005397;SB=131;DP4=104802,110272,437,721;INDEL;HRUN=3",Indel,0.005397
4196,28s,T,G,585,PASS,"DP=216233;AF=0.009018;SB=2307;DP4=103494,110601,1634,316",Substitution,0.009018
4198,28s,G,GC,883,PASS,"DP=213012;AF=0.002526;SB=35;DP4=104055,110316,219,319;INDEL;HRUN=1",Indel,0.002526
4199,28s,ACTGGG,A,905,PASS,"DP=212818;AF=0.002528;SB=34;DP4=103651,110069,219,319;INDEL;HRUN=1",Indel,0.002528
4205,28s,G,A,82,PASS,"DP=212917;AF=0.003147;SB=41;DP4=100819,111239,267,403",Substitution,0.003147
4206,28s,C,T,326,PASS,"DP=212671;AF=0.004081;SB=22;DP4=100530,111074,371,497",Substitution,0.004081
4207,28s,G,A,6885,PASS,"DP=212276;AF=0.011348;SB=165;DP4=99637,109186,942,1467",Substitution,0.011348
4207,28s,G,T,49314,PASS,"DP=212276;AF=0.004574;SB=1;DP4=99637,109186,458,513",Substitution,0.004574
4218,28s,C,T,1804,PASS,"DP=214501;AF=0.005496;SB=97;DP4=100142,112910,445,734",Substitution,0.005496
4219,28s,A,G,65,PASS,"DP=214804;AF=0.005591;SB=63;DP4=99585,113093,491,747",Substitution,0.005591
4223,28s,G,A,10073,PASS,"DP=215465;AF=0.012243;SB=75;DP4=99038,113394,1087,1551",Substitution,0.012243
4228,28s,C,T,25741,PASS,"DP=214487;AF=0.020775;SB=137;DP4=97520,112155,1815,2641",Substitution,0.020775
4229,28s,G,A,1916,PASS,"DP=214302;AF=0.005250;SB=23;DP4=98890,113959,475,650",Substitution,0.00525
4235,28s,G,C,206,PASS,"DP=213759;AF=0.002994;SB=0;DP4=98157,114788,297,343",Substitution,0.002994
4237,28s,C,T,738,PASS,"DP=213352;AF=0.004771;SB=3;DP4=97282,114188,481,537",Substitution,0.004771
4238,28s,C,T,1589,PASS,"DP=213736;AF=0.007799;SB=71;DP4=97156,114665,655,1012",Substitution,0.007799
4244,28s,C,A,49314,PASS,"DP=215050;AF=0.004808;SB=63;DP4=97334,114154,395,639",Substitution,0.004808
4244,28s,C,T,11321,PASS,"DP=215050;AF=0.011486;SB=53;DP4=97334,114154,1023,1447",Substitution,0.011486
4245,28s,G,A,1752,PASS,"DP=215279;AF=0.005203;SB=6;DP4=98795,115153,538,582",Substitution,0.005203
4252,28s,G,A,95,PASS,"DP=216954;AF=0.003005;SB=19;DP4=100722,115299,271,381",Substitution,0.003005
4257,28s,G,T,195,PASS,"DP=216318;AF=0.002866;SB=2;DP4=99828,115670,281,339",Substitution,0.002866
4258,28s,A,G,954,PASS,"DP=216192;AF=0.005680;SB=2;DP4=98777,115023,576,652",Substitution,0.00568
4258,28s,A,T,138,PASS,"DP=216192;AF=0.003946;SB=13;DP4=98777,115023,365,488",Substitution,0.003946
4259,28s,C,T,101,PASS,"DP=216314;AF=0.002515;SB=0;DP4=99628,115960,250,294",Substitution,0.002515
4261,28s,G,T,243,PASS,"DP=215811;AF=0.003267;SB=5;DP4=99223,115447,312,393",Substitution,0.003267
4266,28s,C,A,1396,PASS,"DP=217025;AF=0.004622;SB=28;DP4=99458,115871,413,591",Substitution,0.004622
4266,28s,C,T,262,PASS,"DP=217025;AF=0.002967;SB=31;DP4=99458,115871,254,390",Substitution,0.002967
4267,28s,TCC,T,6837,PASS,"DP=215931;AF=0.002894;SB=32;DP4=99819,116798,245,380;INDEL;HRUN=3",Indel,0.002894
4269,28s,C,T,3046,PASS,"DP=217385;AF=0.006978;SB=95;DP4=98930,115595,577,940",Substitution,0.006978
4270,28s,C,T,6678,PASS,"DP=217670;AF=0.012230;SB=66;DP4=99232,115304,1097,1565",Substitution,0.01223
4271,28s,G,A,5606,PASS,"DP=217490;AF=0.008782;SB=18;DP4=99844,115440,831,1079",Substitution,0.008782
4272,28s,TG,T,6315,PASS,"DP=215807;AF=0.002901;SB=35;DP4=100612,116148,245,381;INDEL;HRUN=2",Indel,0.002901
4277,28s,C,G,519,PASS,"DP=217559;AF=0.003190;SB=40;DP4=101350,115344,273,421",Substitution,0.00319
4279,28s,G,A,831,PASS,"DP=218776;AF=0.003968;SB=51;DP4=102142,114296,344,524",Substitution,0.003968
4279,28s,G,T,3205,PASS,"DP=218776;AF=0.006354;SB=7;DP4=102142,114296,682,708",Substitution,0.006354
4281,28s,AG,A,500,PASS,"DP=218328;AF=0.000426;SB=12;DP4=103959,115531,35,58;INDEL;HRUN=3",Indel,0.000426
4282,28s,G,A,224,PASS,"DP=219874;AF=0.003666;SB=2;DP4=103531,115152,390,416",Substitution,0.003666
4284,28s,G,A,272,PASS,"DP=219974;AF=0.002964;SB=42;DP4=103665,115399,257,395",Substitution,0.002964
4285,28s,C,A,281,PASS,"DP=220840;AF=0.002821;SB=2;DP4=104246,115293,302,321",Substitution,0.002821
4285,28s,C,G,332,PASS,"DP=220840;AF=0.002925;SB=59;DP4=104246,115293,245,401",Substitution,0.002925
4290,28s,GC,G,1105,PASS,"DP=220279;AF=0.002792;SB=0;DP4=105402,115837,290,325;INDEL;HRUN=1",Indel,0.002792
4291,28s,C,T,140,PASS,"DP=221852;AF=0.002290;SB=10;DP4=105211,115308,262,246",Substitution,0.00229
4293,28s,C,T,256,PASS,"DP=220968;AF=0.004652;SB=0;DP4=104732,114301,490,538",Substitution,0.004652
4294,28s,G,A,23705,PASS,"DP=220302;AF=0.017185;SB=49;DP4=104338,111944,1690,2096",Substitution,0.017185
4298,28s,G,A,744,PASS,"DP=220709;AF=0.003797;SB=8;DP4=106268,113364,427,411",Substitution,0.003797
4301,28s,C,G,522,PASS,"DP=221054;AF=0.004022;SB=8;DP4=106962,112441,412,477",Substitution,0.004022
4302,28s,T,G,2231,PASS,"DP=220411;AF=0.006828;SB=142;DP4=106333,111752,636,992",Substitution,0.006828
4310,28s,C,T,776,PASS,"DP=221938;AF=0.003753;SB=15;DP4=108069,112833,376,457",Substitution,0.003753
4312,28s,G,T,603,PASS,"DP=222872;AF=0.004433;SB=7;DP4=108086,113716,504,484",Substitution,0.004433
4314,28s,A,G,854,PASS,"DP=221595;AF=0.008245;SB=121;DP4=107022,111790,740,1087",Substitution,0.008245
4315,28s,C,T,12811,PASS,"DP=221455;AF=0.013240;SB=8;DP4=106342,111265,1392,1540",Substitution,0.01324
4316,28s,G,A,125,PASS,"DP=221729;AF=0.003139;SB=7;DP4=108096,111868,323,373",Substitution,0.003139
4316,28s,G,T,799,PASS,"DP=221729;AF=0.004510;SB=8;DP4=108096,111868,515,486",Substitution,0.00451
4325,28s,CCG,C,9115,PASS,"DP=217054;AF=0.003322;SB=72;DP4=108473,110102,285,436;INDEL;HRUN=2",Indel,0.003322
4327,28s,G,A,3338,PASS,"DP=219234;AF=0.007617;SB=0;DP4=108128,107743,840,830",Substitution,0.007617
4327,28s,G,T,375,PASS,"DP=219234;AF=0.004069;SB=4;DP4=108128,107743,432,460",Substitution,0.004069
4333,28s,G,A,257,PASS,"DP=219338;AF=0.002772;SB=58;DP4=110422,108083,248,360",Substitution,0.002772
4334,28s,C,A,132,PASS,"DP=219262;AF=0.002559;SB=4;DP4=110158,107789,295,266",Substitution,0.002559
4334,28s,C,T,398,PASS,"DP=219262;AF=0.003165;SB=13;DP4=110158,107789,377,317",Substitution,0.003165
4335,28s,G,A,6891,PASS,"DP=218187;AF=0.009162;SB=45;DP4=109613,105730,923,1076",Substitution,0.009162
4335,28s,G,T,49314,PASS,"DP=218187;AF=0.003511;SB=43;DP4=109613,105730,333,433",Substitution,0.003511
4336,28s,G,A,158,PASS,"DP=218027;AF=0.003156;SB=12;DP4=110449,106660,376,312",Substitution,0.003156
4339,28s,C,CT,444,PASS,"DP=216543;AF=0.002595;SB=57;DP4=110678,106146,230,332;INDEL;HRUN=2",Indel,0.002595
4340,28s,C,T,307,PASS,"DP=218061;AF=0.005636;SB=115;DP4=110675,105960,505,724",Substitution,0.005636
4342,28s,C,T,141,PASS,"DP=218549;AF=0.003404;SB=41;DP4=110827,106260,434,310",Substitution,0.003404
4344,28s,C,G,49314,PASS,"DP=218401;AF=0.003512;SB=33;DP4=110604,105168,442,325",Substitution,0.003512
4344,28s,C,T,3983,PASS,"DP=218401;AF=0.007706;SB=16;DP4=110604,105168,815,868",Substitution,0.007706
4345,28s,G,A,2568,PASS,"DP=218319;AF=0.006518;SB=23;DP4=111729,104613,681,742",Substitution,0.006518
4349,28s,C,T,500,PASS,"DP=220413;AF=0.003630;SB=30;DP4=113096,106016,460,340",Substitution,0.00363
4353,28s,T,A,113,PASS,"DP=221022;AF=0.003787;SB=35;DP4=113632,106102,380,457",Substitution,0.003787
4355,28s,AC,A,8486,PASS,"DP=219396;AF=0.003140;SB=5;DP4=114711,105610,374,315;INDEL;HRUN=2",Indel,0.00314
4358,28s,TTTTGGG,T,4877,PASS,"DP=219835;AF=0.001974;SB=7;DP4=114761,106034,211,223;INDEL;HRUN=4",Indel,0.001974
4359,28s,T,TTTGG,3488,PASS,"DP=219669;AF=0.001552;SB=0;DP4=114662,106106,177,164;INDEL;HRUN=4",Indel,0.001552
4372,28s,CAGG,C,17300,PASS,"DP=216323;AF=0.005270;SB=122;DP4=114409,102443,479,661;INDEL;HRUN=1",Indel,0.00527
4378,28s,G,GT,5795,PASS,"DP=216008;AF=0.002329;SB=5;DP4=113879,103239,252,251;INDEL;HRUN=1",Indel,0.002329
4384,28s,GA,G,7737,PASS,"DP=214949;AF=0.002954;SB=8;DP4=113100,102031,315,320;INDEL;HRUN=4",Indel,0.002954
4384,28s,GAA,G,5607,PASS,"DP=214949;AF=0.002335;SB=66;DP4=113100,102031,206,296;INDEL;HRUN=4",Indel,0.002335
4388,28s,A,T,197,PASS,"DP=216127;AF=0.004539;SB=1;DP4=113062,101813,521,460",Substitution,0.004539
4396,28s,C,CA,2777,PASS,"DP=215163;AF=0.001362;SB=1;DP4=113124,102863,150,143;INDEL;HRUN=1",Indel,0.001362
4396,28s,C,T,190,PASS,"DP=216280;AF=0.003172;SB=88;DP4=112866,102494,280,406",Substitution,0.003172
4397,28s,A,AG,6866,PASS,"DP=215188;AF=0.002579;SB=74;DP4=113270,102750,226,329;INDEL;HRUN=3",Indel,0.002579
4399,28s,G,GA,7713,PASS,"DP=215182;AF=0.002853;SB=10;DP4=112629,103552,299,315;INDEL;HRUN=3",Indel,0.002853
4401,28s,A,C,307,PASS,"DP=216075;AF=0.005100;SB=325;DP4=111251,103540,769,335",Substitution,0.0051
4414,28s,G,T,4564,PASS,"DP=217132;AF=0.007466;SB=31;DP4=111211,104212,768,853",Substitution,0.007466
4416,28s,C,T,2397,PASS,"DP=216335;AF=0.005552;SB=38;DP4=110685,104244,552,649",Substitution,0.005552
4424,28s,C,A,67,PASS,"DP=215300;AF=0.002485;SB=18;DP4=109681,104346,246,289",Substitution,0.002485
4424,28s,C,T,289,PASS,"DP=215300;AF=0.003131;SB=17;DP4=109681,104346,314,360",Substitution,0.003131
4425,28s,G,A,543,PASS,"DP=215540;AF=0.004027;SB=61;DP4=110169,104277,373,495",Substitution,0.004027
4432,28s,G,A,183,PASS,"DP=213143;AF=0.002914;SB=9;DP4=107977,104249,296,325",Substitution,0.002914
4433,28s,C,G,4097,PASS,"DP=212975;AF=0.007118;SB=21;DP4=107658,103542,720,796",Substitution,0.007118
4436,28s,C,T,430,PASS,"DP=211293;AF=0.004080;SB=9;DP4=106904,103277,414,448",Substitution,0.00408
4438,28s,TCGC,T,3723,PASS,"DP=209649;AF=0.001727;SB=17;DP4=106970,103443,161,201;INDEL;HRUN=1",Indel,0.001727
4439,28s,C,T,1836,PASS,"DP=211335;AF=0.005541;SB=4;DP4=106619,102953,579,592",Substitution,0.005541
4454,28s,C,T,4460,PASS,"DP=208927;AF=0.010128;SB=0;DP4=103941,101893,1065,1051",Substitution,0.010128
4455,28s,G,A,665,PASS,"DP=209336;AF=0.004600;SB=3;DP4=106038,102033,480,483",Substitution,0.0046
4460,28s,C,T,5224,PASS,"DP=209661;AF=0.010312;SB=3;DP4=105547,101275,1086,1076",Substitution,0.010312
4461,28s,G,A,70,PASS,"DP=209490;AF=0.003241;SB=0;DP4=106810,101658,345,334",Substitution,0.003241
4463,28s,C,A,202,PASS,"DP=209629;AF=0.002819;SB=0;DP4=106923,100941,306,285",Substitution,0.002819
4463,28s,C,T,1602,PASS,"DP=209629;AF=0.004885;SB=7;DP4=106923,100941,505,519",Substitution,0.004885
4470,28s,TATC,T,5326,PASS,"DP=209029;AF=0.002148;SB=2;DP4=107427,102617,236,213;INDEL;HRUN=1",Indel,0.002148
4481,28s,A,AGC,4482,PASS,"DP=210337;AF=0.001892;SB=2;DP4=105659,105746,205,193;INDEL;HRUN=1",Indel,0.001892
4483,28s,C,T,8962,PASS,"DP=211780;AF=0.011559;SB=10;DP4=104577,104443,1268,1180",Substitution,0.011559
4494,28s,A,C,462,PASS,"DP=213088;AF=0.007410;SB=313;DP4=106138,105066,1027,552",Substitution,0.00741
4498,28s,G,A,8936,PASS,"DP=212049;AF=0.011865;SB=22;DP4=105101,104033,1335,1181",Substitution,0.011865
4505,28s,T,G,123,PASS,"DP=212262;AF=0.003368;SB=4;DP4=105708,105638,345,370",Substitution,0.003368
4510,28s,ACCC,A,10703,PASS,"DP=210892;AF=0.003618;SB=4;DP4=105607,105830,394,369;INDEL;HRUN=3",Indel,0.003618
4524,28s,A,C,8082,PASS,"DP=214473;AF=0.011871;SB=91;DP4=104190,107336,1410,1136",Substitution,0.011871
4526,28s,C,T,5934,PASS,"DP=214536;AF=0.011000;SB=46;DP4=104398,107299,1267,1093",Substitution,0.011
4527,28s,G,C,593,PASS,"DP=214949;AF=0.004303;SB=558;DP4=106021,107807,695,230",Substitution,0.004303
4534,28s,G,T,83,PASS,"DP=215646;AF=0.003190;SB=25;DP4=106668,108220,381,307",Substitution,0.00319
4536,28s,G,A,9886,PASS,"DP=215042;AF=0.011537;SB=64;DP4=105000,107328,1354,1127",Substitution,0.011537
4543,28s,C,A,263,PASS,"DP=216842;AF=0.004552;SB=453;DP4=105801,109135,707,280",Substitution,0.004552
4543,28s,C,T,72,PASS,"DP=216842;AF=0.003865;SB=36;DP4=105801,109135,466,372",Substitution,0.003865
4545,28s,G,T,782,PASS,"DP=217074;AF=0.004565;SB=41;DP4=106551,108581,554,437",Substitution,0.004565
4547,28s,C,A,1042,PASS,"DP=217393;AF=0.004959;SB=86;DP4=107023,109185,632,446",Substitution,0.004959
4548,28s,G,A,856,PASS,"DP=218360;AF=0.004401;SB=7;DP4=108316,108883,501,460",Substitution,0.004401
4571,28s,A,C,941,PASS,"DP=225555;AF=0.010037;SB=641;DP4=113521,109186,1556,709",Substitution,0.010037
4572,28s,C,CTG,152,PASS,"DP=224823;AF=0.000271;SB=0;DP4=114925,109336,32,29;INDEL;HRUN=1",Indel,0.000271
4572,28s,C,CG,21593,PASS,"DP=224823;AF=0.006321;SB=54;DP4=114925,109336,816,605;INDEL;HRUN=1",Indel,0.006321
4572,28s,CTG,C,8419,PASS,"DP=224823;AF=0.003332;SB=25;DP4=115267,109589,425,324;INDEL;HRUN=1",Indel,0.003332
4572,28s,CTGA,C,764,PASS,"DP=224823;AF=0.000623;SB=13;DP4=115267,109589,84,56;INDEL;HRUN=1",Indel,0.000623
4575,28s,A,T,83,PASS,"DP=226578;AF=0.005512;SB=71;DP4=115831,108943,548,701",Substitution,0.005512
4577,28s,GA,G,22028,PASS,"DP=226930;AF=0.006451;SB=50;DP4=116699,110053,839,625;INDEL;HRUN=1",Indel,0.006451
4580,28s,GTGT,G,7666,PASS,"DP=232236;AF=0.002898;SB=13;DP4=120119,112537,374,299;INDEL;HRUN=1",Indel,0.002898
4580,28s,G,A,391,PASS,"DP=233329;AF=0.003810;SB=21;DP4=119278,111909,499,390",Substitution,0.00381
4580,28s,G,C,852,PASS,"DP=233329;AF=0.004564;SB=45;DP4=119278,111909,618,447",Substitution,0.004564
4586,28s,T,C,4677,PASS,"DP=235992;AF=0.015390;SB=45;DP4=119506,111859,2003,1629",Substitution,0.01539
4588,28s,G,A,11421,PASS,"DP=237464;AF=0.012153;SB=29;DP4=120815,113271,1578,1308",Substitution,0.012153
4590,28s,C,A,629,PASS,"DP=238264;AF=0.004764;SB=5;DP4=122104,114914,603,532",Substitution,0.004764
4596,28s,AAT,A,8631,PASS,"DP=237890;AF=0.003161;SB=9;DP4=122434,116403,408,344;INDEL;HRUN=2",Indel,0.003161
4605,28s,C,G,11002,PASS,"DP=240126;AF=0.011177;SB=10;DP4=121132,116103,1414,1270",Substitution,0.011177
4608,28s,T,C,6773,PASS,"DP=240641;AF=0.011245;SB=59;DP4=120337,117164,1498,1208",Substitution,0.011245
4610,28s,C,G,49314,PASS,"DP=240003;AF=0.008658;SB=66;DP4=117252,113951,1173,906",Substitution,0.008658
4610,28s,C,T,45522,PASS,"DP=240003;AF=0.027145;SB=42;DP4=117252,113951,3468,3047",Substitution,0.027145
4611,28s,G,A,4536,PASS,"DP=239075;AF=0.007780;SB=40;DP4=119774,115615,1032,828",Substitution,0.00778
4611,28s,G,C,1555,PASS,"DP=239075;AF=0.005241;SB=60;DP4=119774,115615,725,528",Substitution,0.005241
4612,28s,AGAGG,A,8749,PASS,"DP=237927;AF=0.003648;SB=75;DP4=121375,116980,524,344;INDEL;HRUN=1",Indel,0.003648
4613,28s,G,A,942,PASS,"DP=239178;AF=0.004202;SB=21;DP4=120344,116717,553,452",Substitution,0.004202
4618,28s,A,AT,480,PASS,"DP=236828;AF=0.001550;SB=21;DP4=120495,117511,212,155;INDEL;HRUN=2",Indel,0.00155
4618,28s,A,C,1706,PASS,"DP=238373;AF=0.014251;SB=2554;DP4=117996,116791,2679,718",Substitution,0.014251
4619,28s,C,T,21645,PASS,"DP=238240;AF=0.017919;SB=87;DP4=118145,115602,2356,1913",Substitution,0.017919
4621,28s,G,A,49314,PASS,"DP=237636;AF=0.031679;SB=52;DP4=116290,112657,4024,3504",Substitution,0.031679
4621,28s,G,C,49314,PASS,"DP=237636;AF=0.004141;SB=15;DP4=116290,112657,535,450",Substitution,0.004141
4622,28s,C,A,17128,PASS,"DP=238799;AF=0.013815;SB=5;DP4=119879,115544,1713,1586",Substitution,0.013815
4623,28s,A,T,293,PASS,"DP=239659;AF=0.004673;SB=1165;DP4=121721,116543,200,920",Substitution,0.004673
4624,28s,G,A,1180,PASS,"DP=239430;AF=0.004360;SB=56;DP4=121210,116950,608,436",Substitution,0.00436
4625,28s,G,A,49314,PASS,"DP=239653;AF=0.004210;SB=13;DP4=119834,114989,483,526",Substitution,0.00421
4625,28s,G,T,17194,PASS,"DP=239653;AF=0.015677;SB=0;DP4=119834,114989,1912,1845",Substitution,0.015677
4630,28s,G,C,12479,PASS,"DP=240513;AF=0.011841;SB=19;DP4=121484,115885,1525,1323",Substitution,0.011841
4632,28s,CATTTGGTGT,C,26282,PASS,"DP=239952;AF=0.007122;SB=44;DP4=123118,116593,964,745;INDEL;HRUN=1",Indel,0.007122
4637,28s,G,T,825,PASS,"DP=241931;AF=0.004071;SB=12;DP4=122052,117106,533,452",Substitution,0.004071
4638,28s,G,T,507,PASS,"DP=241788;AF=0.004086;SB=5;DP4=122033,116989,521,467",Substitution,0.004086
4640,28s,G,C,134,PASS,"DP=241267;AF=0.003026;SB=47;DP4=121825,116741,431,300",Substitution,0.003026
4644,28s,G,A,242,PASS,"DP=241864;AF=0.003101;SB=9;DP4=122206,118702,402,348",Substitution,0.003101
4646,28s,G,C,7916,PASS,"DP=242511;AF=0.008515;SB=40;DP4=121933,118331,1137,928",Substitution,0.008515
4651,28s,G,A,17028,PASS,"DP=242913;AF=0.016343;SB=59;DP4=119925,118417,2153,1817",Substitution,0.016343
4652,28s,C,T,8883,PASS,"DP=243174;AF=0.012748;SB=96;DP4=120764,118980,1739,1361",Substitution,0.012748
4654,28s,G,A,1400,PASS,"DP=244201;AF=0.004287;SB=136;DP4=122451,120505,651,396",Substitution,0.004287
4657,28s,G,A,67,PASS,"DP=243940;AF=0.002853;SB=7;DP4=122778,120207,333,363",Substitution,0.002853
4659,28s,G,A,39824,PASS,"DP=242947;AF=0.022355;SB=19;DP4=119905,117348,2838,2593",Substitution,0.022355
4664,28s,TG,T,674,PASS,"DP=240196;AF=0.001074;SB=0;DP4=123021,118596,132,126;INDEL;HRUN=4",Indel,0.001074
4665,28s,G,A,217,PASS,"DP=241021;AF=0.002884;SB=11;DP4=122267,117611,330,365",Substitution,0.002884
4668,28s,G,A,634,PASS,"DP=238460;AF=0.003984;SB=130;DP4=120577,116742,597,353",Substitution,0.003984
4669,28s,C,T,49314,PASS,"DP=236710;AF=0.042727;SB=86;DP4=114861,111525,5439,4675",Substitution,0.042727
4670,28s,G,A,31443,PASS,"DP=235892;AF=0.021234;SB=139;DP4=117529,112922,2831,2178",Substitution,0.021234
4671,28s,A,C,168,PASS,"DP=236313;AF=0.003648;SB=0;DP4=120296,114846,439,423",Substitution,0.003648
4673,28s,G,A,3596,PASS,"DP=236209;AF=0.005957;SB=6;DP4=119962,113989,745,662",Substitution,0.005957
4673,28s,G,T,49314,PASS,"DP=236209;AF=0.003387;SB=27;DP4=119962,113989,455,345",Substitution,0.003387
4678,28s,C,A,566,PASS,"DP=236941;AF=0.005411;SB=112;DP4=119891,114204,533,749",Substitution,0.005411
4681,28s,C,A,3360,PASS,"DP=237429;AF=0.008992;SB=0;DP4=120181,114356,1088,1047",Substitution,0.008992
4685,28s,G,A,49314,PASS,"DP=236949;AF=0.003701;SB=48;DP4=119172,114456,512,365",Substitution,0.003701
4685,28s,G,T,9173,PASS,"DP=236949;AF=0.009892;SB=58;DP4=119172,114456,1313,1031",Substitution,0.009892
4691,28s,A,G,86,PASS,"DP=236307;AF=0.006496;SB=89;DP4=118868,113632,904,631",Substitution,0.006496
4691,28s,A,T,540,PASS,"DP=236307;AF=0.008015;SB=604;DP4=118868,113632,611,1283",Substitution,0.008015
4699,28s,AC,A,798,PASS,"DP=229253;AF=0.000624;SB=5;DP4=117401,113683,79,64;INDEL;HRUN=1",Indel,0.000624
4699,28s,A,C,151,PASS,"DP=231227;AF=0.007711;SB=1702;DP4=117022,112184,340,1445",Substitution,0.007711
4700,28s,C,G,49314,PASS,"DP=230597;AF=0.003304;SB=1;DP4=115412,112245,380,383",Substitution,0.003304
4700,28s,C,T,4583,PASS,"DP=230597;AF=0.008109;SB=76;DP4=115412,112245,1069,801",Substitution,0.008109
4701,28s,G,A,552,PASS,"DP=229365;AF=0.003671;SB=37;DP4=115983,112271,483,359",Substitution,0.003671
4702,28s,C,A,6725,PASS,"DP=229033;AF=0.008885;SB=62;DP4=115499,111379,1149,886",Substitution,0.008885
4705,28s,C,CT,21469,PASS,"DP=227138;AF=0.006194;SB=33;DP4=115240,111998,780,627;INDEL;HRUN=1",Indel,0.006194
4707,28s,AAGTC,A,245,PASS,"DP=226347;AF=0.000318;SB=4;DP4=115667,112167,41,31;INDEL;HRUN=2",Indel,0.000318
4709,28s,G,A,10930,PASS,"DP=227064;AF=0.015811;SB=60;DP4=113167,109647,1972,1618",Substitution,0.015811
4716,28s,TC,T,70,PASS,"DP=222264;AF=0.000180;SB=5;DP4=113504,110586,24,16;INDEL;HRUN=3",Indel,0.00018
4717,28s,C,A,317,PASS,"DP=223751;AF=0.003187;SB=102;DP4=112337,109959,448,265",Substitution,0.003187
4717,28s,C,T,194,PASS,"DP=223751;AF=0.002905;SB=1;DP4=112337,109959,323,327",Substitution,0.002905
4719,28s,CGCCCAG,C,1193,PASS,"DP=220502;AF=0.000934;SB=9;DP4=112289,110068,116,90;INDEL;HRUN=1",Indel,0.000934
4719,28s,C,T,1146,PASS,"DP=222563;AF=0.005702;SB=26;DP4=111615,109486,695,574",Substitution,0.005702
4720,28s,G,A,2455,PASS,"DP=221911;AF=0.005800;SB=47;DP4=111323,108880,728,559",Substitution,0.0058
4723,28s,C,G,212,PASS,"DP=220624;AF=0.003835;SB=7;DP4=110531,108839,458,410",Substitution,0.003835
4727,28s,C,A,2073,PASS,"DP=213080;AF=0.006467;SB=53;DP4=105671,104883,777,601",Substitution,0.006467
4728,28s,G,T,176,PASS,"DP=211963;AF=0.003477;SB=29;DP4=105479,105105,414,323",Substitution,0.003477
4731,28s,A,C,974,PASS,"DP=210363;AF=0.015644;SB=668;DP4=103998,102831,1159,2139",Substitution,0.015644
4732,28s,C,G,4936,PASS,"DP=209200;AF=0.009120;SB=25;DP4=103462,103577,1020,889",Substitution,0.00912
4733,28s,G,C,72,PASS,"DP=208747;AF=0.005662;SB=79;DP4=104005,102508,694,488",Substitution,0.005662
4737,28s,C,G,1329,PASS,"DP=206233;AF=0.005882;SB=519;DP4=102601,101239,348,866",Substitution,0.005882
4737,28s,C,T,513,PASS,"DP=206233;AF=0.004587;SB=16;DP4=102601,101239,511,435",Substitution,0.004587
4738,28s,G,A,5669,PASS,"DP=205491;AF=0.009178;SB=140;DP4=102124,101244,1116,770",Substitution,0.009178
4743,28s,C,G,815,PASS,"DP=203128;AF=0.004244;SB=6;DP4=100920,101048,413,449",Substitution,0.004244
4744,28s,G,A,75,PASS,"DP=202335;AF=0.002723;SB=31;DP4=100699,100072,316,235",Substitution,0.002723
4744,28s,G,C,703,PASS,"DP=202335;AF=0.004166;SB=39;DP4=100699,100072,479,364",Substitution,0.004166
4746,28s,C,T,169,PASS,"DP=201571;AF=0.003760;SB=76;DP4=100242,99765,457,301",Substitution,0.00376
4747,28s,G,A,1083,PASS,"DP=201007;AF=0.004229;SB=95;DP4=99579,100007,516,334",Substitution,0.004229
4748,28s,C,T,2682,PASS,"DP=200754;AF=0.007591;SB=64;DP4=99422,98413,866,658",Substitution,0.007591
4749,28s,G,A,1169,PASS,"DP=200273;AF=0.004863;SB=145;DP4=99490,99648,610,364",Substitution,0.004863
4751,28s,A,T,137,PASS,"DP=199002;AF=0.005171;SB=1038;DP4=97833,94351,187,842",Substitution,0.005171
4752,28s,G,C,279,PASS,"DP=198404;AF=0.003508;SB=29;DP4=98271,99212,304,393",Substitution,0.003508
4756,28s,C,T,49314,PASS,"DP=196951;AF=0.007677;SB=56;DP4=96029,95955,849,663",Substitution,0.007677
4778,28s,C,A,222,PASS,"DP=184080;AF=0.003096;SB=48;DP4=85107,98046,317,253",Substitution,0.003096
4803,28s,CG,C,167,PASS,"DP=170878;AF=0.000696;SB=23;DP4=76848,96014,37,82;INDEL;HRUN=1",Indel,0.000696
4803,28s,CGCCCCCCCCCTCCACGCGCCCCGCGCGCGCGGGAGGGCGCGT,C,1969,PASS,"DP=170878;AF=0.001165;SB=27;DP4=76848,96014,111,88;INDEL;HRUN=1",Indel,0.001165
4804,28s,G,GC,49314,PASS,"DP=170097;AF=0.113200;SB=5;DP4=66993,83123,8676,10579;INDEL;HRUN=9",Indel,0.1132
4804,28s,G,GCC,9078,PASS,"DP=170097;AF=0.011247;SB=54;DP4=66993,83123,752,1161;INDEL;HRUN=9",Indel,0.011247
4804,28s,GC,G,49314,PASS,"DP=170097;AF=0.482466;SB=216;DP4=40727,48310,35617,46449;INDEL;HRUN=9",Indel,0.482466
4812,28s,C,CA,843,PASS,"DP=172825;AF=0.000787;SB=6;DP4=74043,100061,65,71;INDEL;HRUN=9",Indel,0.000787
4817,28s,A,G,49314,PASS,"DP=174612;AF=0.037769;SB=23;DP4=68986,88565,2861,3942",Substitution,0.037769
4824,28s,CCG,C,79,PASS,"DP=171919;AF=0.000169;SB=2;DP4=69890,103534,10,19;INDEL;HRUN=4",Indel,0.000169
4827,28s,C,T,1106,PASS,"DP=171738;AF=0.006096;SB=8;DP4=68113,102110,395,652",Substitution,0.006096
4845,28s,T,G,3331,PASS,"DP=170485;AF=0.031569;SB=2988;DP4=61208,103115,3381,2024",Substitution,0.031569
4849,28s,CCGCCGCG,C,5039,PASS,"DP=171010;AF=0.002327;SB=4;DP4=64727,107002,141,257;INDEL;HRUN=4",Indel,0.002327
4854,28s,G,C,2695,PASS,"DP=172551;AF=0.007592;SB=1364;DP4=62715,107988,928,382",Substitution,0.007592
4855,28s,C,T,432,PASS,"DP=172515;AF=0.003901;SB=223;DP4=63055,108155,375,298",Substitution,0.003901
4864,28s,AC,A,1334,PASS,"DP=175479;AF=0.000986;SB=14;DP4=64410,111994,77,96;INDEL;HRUN=2",Indel,0.000986
4867,28s,G,A,479,PASS,"DP=177277;AF=0.004422;SB=75;DP4=63922,112077,361,423",Substitution,0.004422
4874,28s,G,A,359,PASS,"DP=178598;AF=0.003964;SB=68;DP4=63514,114013,322,386",Substitution,0.003964
4876,28s,T,G,2822,PASS,"DP=179502;AF=0.017264;SB=2147483647;DP4=61739,114186,2399,710",Substitution,0.017264
4883,28s,T,G,134,PASS,"DP=180355;AF=0.014521;SB=0;DP4=63309,114084,937,1684",Substitution,0.014521
4888,28s,T,G,162,PASS,"DP=185658;AF=0.009022;SB=2147483647;DP4=61380,118818,2968,1063",Substitution,0.009022
4890,28s,C,T,82,PASS,"DP=186837;AF=0.004474;SB=115;DP4=64344,120689,389,447",Substitution,0.004474
4891,28s,G,C,3160,PASS,"DP=187572;AF=0.008583;SB=373;DP4=64951,120668,818,793",Substitution,0.008583
4900,28s,AACG,A,3274,PASS,"DP=189765;AF=0.001707;SB=66;DP4=66428,124002,70,254;INDEL;HRUN=3",Indel,0.001707
4900,28s,A,C,2467,PASS,"DP=190754;AF=0.018857;SB=2147483647;DP4=63514,123155,2645,952",Substitution,0.018857
4903,28s,G,C,466,PASS,"DP=191544;AF=0.003973;SB=484;DP4=66087,124121,469,301",Substitution,0.003973
4907,28s,C,T,12465,PASS,"DP=192123;AF=0.013877;SB=226;DP4=64968,124244,1166,1500",Substitution,0.013877
4908,28s,G,C,327,PASS,"DP=192333;AF=0.003016;SB=185;DP4=66304,125290,307,273",Substitution,0.003016
4909,28s,C,A,169,PASS,"DP=192503;AF=0.003143;SB=169;DP4=66216,124707,313,292",Substitution,0.003143
4909,28s,C,T,646,PASS,"DP=192503;AF=0.004192;SB=7;DP4=66216,124707,261,546",Substitution,0.004192
4913,28s,C,T,49314,PASS,"DP=195887;AF=0.160970;SB=42;DP4=57201,106447,10648,20884",Substitution,0.16097
4917,28s,A,C,3921,PASS,"DP=198636;AF=0.024573;SB=2147483647;DP4=65600,126783,3540,1341",Substitution,0.024573
4920,28s,G,GCGGC,6174,PASS,"DP=198422;AF=0.002626;SB=83;DP4=69741,129199,248,273;INDEL;HRUN=1",Indel,0.002626
4922,28s,GGCC,G,475,PASS,"DP=200293;AF=0.001638;SB=61;DP4=71058,130104,74,254;INDEL;HRUN=2",Indel,0.001638
4926,28s,G,GA,164,PASS,"DP=203710;AF=0.000957;SB=5;DP4=72465,131877,77,118;INDEL;HRUN=5",Indel,0.000957
4926,28s,GC,G,7637,PASS,"DP=203710;AF=0.003412;SB=72;DP4=72235,131629,316,379;INDEL;HRUN=5",Indel,0.003412
4932,28s,T,A,106,PASS,"DP=212806;AF=0.004995;SB=1859;DP4=72319,137421,832,231",Substitution,0.004995
4933,28s,C,T,1078,PASS,"DP=213423;AF=0.004953;SB=2;DP4=74657,137495,381,676",Substitution,0.004953
4934,28s,G,A,561,PASS,"DP=213510;AF=0.003531;SB=66;DP4=75196,137246,336,418",Substitution,0.003531
4938,28s,G,A,1516,PASS,"DP=216688;AF=0.005404;SB=115;DP4=76449,138177,534,637",Substitution,0.005404
4938,28s,G,T,100,PASS,"DP=216688;AF=0.003004;SB=82;DP4=76449,138177,305,346",Substitution,0.003004
4942,28s,C,T,5032,PASS,"DP=218520;AF=0.009180;SB=94;DP4=77327,138936,854,1152",Substitution,0.00918
4944,28s,C,CA,1330,PASS,"DP=217764;AF=0.003316;SB=57;DP4=78451,139410,323,399;INDEL;HRUN=1",Indel,0.003316
4946,28s,C,A,38829,PASS,"DP=219017;AF=0.029559;SB=225;DP4=76192,136092,2717,3757",Substitution,0.029559
4947,28s,C,G,49314,PASS,"DP=219294;AF=0.006133;SB=164;DP4=77344,137701,652,733",Substitution,0.006133
4947,28s,C,T,4853,PASS,"DP=219294;AF=0.010962;SB=141;DP4=77344,137701,1051,1353",Substitution,0.010962
4951,28s,C,A,197,PASS,"DP=222423;AF=0.003606;SB=7;DP4=80854,139502,313,489",Substitution,0.003606
4951,28s,C,T,997,PASS,"DP=222423;AF=0.005085;SB=63;DP4=80854,139502,498,633",Substitution,0.005085
4952,28s,G,A,1846,PASS,"DP=222796;AF=0.005893;SB=121;DP4=81821,139343,614,699",Substitution,0.005893
4953,28s,T,G,999,PASS,"DP=223388;AF=0.012270;SB=2147483647;DP4=80540,139664,2192,557",Substitution,0.01227
4956,28s,G,A,99,PASS,"DP=223202;AF=0.003356;SB=9;DP4=82876,138020,302,447",Substitution,0.003356
4956,28s,G,C,1526,PASS,"DP=223202;AF=0.005766;SB=37;DP4=82876,138020,549,738",Substitution,0.005766
4961,28s,G,C,121,PASS,"DP=223918;AF=0.002979;SB=24;DP4=84999,137445,292,375",Substitution,0.002979
4968,28s,G,A,5516,PASS,"DP=223036;AF=0.008057;SB=19;DP4=86462,134497,650,1147",Substitution,0.008057
4969,28s,C,T,31030,PASS,"DP=223029;AF=0.021271;SB=167;DP4=85367,132661,2149,2595",Substitution,0.021271
4970,28s,G,A,9079,PASS,"DP=222730;AF=0.010160;SB=15;DP4=86935,132919,946,1317",Substitution,0.01016
4971,28s,C,T,620,PASS,"DP=222460;AF=0.004082;SB=9;DP4=87992,133251,338,570",Substitution,0.004082
4974,28s,A,C,396,PASS,"DP=223989;AF=0.009295;SB=1360;DP4=89490,131980,317,1766",Substitution,0.009295
4976,28s,C,G,1913,PASS,"DP=223781;AF=0.006940;SB=10;DP4=89313,132113,660,893",Substitution,0.00694
4977,28s,C,T,7709,PASS,"DP=223700;AF=0.011314;SB=13;DP4=89461,131376,1076,1455",Substitution,0.011314
4978,28s,A,C,118,PASS,"DP=223612;AF=0.011918;SB=9;DP4=88991,129813,1071,1668",Substitution,0.011918
4979,28s,T,G,281,PASS,"DP=223542;AF=0.012924;SB=138;DP4=89463,129529,992,1936",Substitution,0.012924
4981,28s,C,G,4921,PASS,"DP=223052;AF=0.009061;SB=115;DP4=89210,129491,981,1040",Substitution,0.009061
4981,28s,C,T,5085,PASS,"DP=223052;AF=0.009186;SB=13;DP4=89210,129491,880,1169",Substitution,0.009186
4982,28s,G,A,13057,PASS,"DP=222570;AF=0.014566;SB=4;DP4=89131,127727,1308,1934",Substitution,0.014566
4982,28s,G,C,49314,PASS,"DP=222570;AF=0.008433;SB=86;DP4=89131,127727,901,978",Substitution,0.008433
4984,28s,A,C,176,PASS,"DP=222916;AF=0.007572;SB=83;DP4=91036,129199,1039,1143",Substitution,0.007572
4987,28s,C,G,49314,PASS,"DP=221438;AF=0.006666;SB=40;DP4=89581,124998,691,786",Substitution,0.006666
4987,28s,C,T,31624,PASS,"DP=221438;AF=0.023411;SB=21;DP4=89581,124998,2261,2923",Substitution,0.023411
4988,28s,G,A,2966,PASS,"DP=221834;AF=0.007470;SB=16;DP4=92563,125936,748,909",Substitution,0.00747
4988,28s,G,T,522,PASS,"DP=221834;AF=0.004508;SB=1;DP4=92563,125936,417,583",Substitution,0.004508
4989,28s,A,C,888,PASS,"DP=222377;AF=0.009578;SB=272;DP4=93532,125903,662,1472",Substitution,0.009578
4991,28s,C,T,294,PASS,"DP=225226;AF=0.004422;SB=111;DP4=95954,127886,321,675",Substitution,0.004422
4994,28s,C,CAGAA,2444,PASS,"DP=223748;AF=0.002011;SB=37;DP4=96972,127299,155,295;INDEL;HRUN=2",Indel,0.002011
4994,28s,C,T,2449,PASS,"DP=224734;AF=0.006635;SB=2;DP4=96279,126586,634,857",Substitution,0.006635
4995,28s,T,G,472,PASS,"DP=224994;AF=0.008422;SB=1108;DP4=94810,125861,2216,1370",Substitution,0.008422
5001,28s,G,C,335,PASS,"DP=222109;AF=0.004381;SB=13;DP4=96771,124206,396,579",Substitution,0.004381
5002,28s,T,G,842,PASS,"DP=221465;AF=0.009333;SB=196;DP4=95775,123191,1115,952",Substitution,0.009333
5003,28s,C,CGGGGTTT,582,PASS,"DP=217734;AF=0.001268;SB=58;DP4=96891,123707,82,194;INDEL;HRUN=4",Indel,0.001268
5003,28s,C,T,7641,PASS,"DP=220881;AF=0.012065;SB=45;DP4=95151,121490,1279,1386",Substitution,0.012065
5004,28s,G,A,49314,PASS,"DP=219462;AF=0.035350;SB=80;DP4=92893,118054,3674,4084",Substitution,0.03535
5007,28s,G,A,3573,PASS,"DP=219012;AF=0.009977;SB=30;DP4=96085,120508,892,1293",Substitution,0.009977
5008,28s,T,G,127,PASS,"DP=218216;AF=0.011534;SB=2702;DP4=94330,120507,1975,544",Substitution,0.011534
5009,28s,T,G,716,PASS,"DP=217586;AF=0.011931;SB=2584;DP4=94295,120368,2005,591",Substitution,0.011931
5011,28s,C,T,47219,PASS,"DP=215396;AF=0.030418;SB=0;DP4=92597,115935,2912,3640",Substitution,0.030418
5012,28s,G,A,49314,PASS,"DP=214601;AF=0.009459;SB=61;DP4=91803,113342,797,1233",Substitution,0.009459
5012,28s,G,C,44711,PASS,"DP=214601;AF=0.030112;SB=26;DP4=91803,113342,3016,3447",Substitution,0.030112
5012,28s,G,T,49314,PASS,"DP=214601;AF=0.004324;SB=16;DP4=91803,113342,381,547",Substitution,0.004324
5014,28s,AC,A,3970,PASS,"DP=212487;AF=0.002701;SB=5;DP4=95892,117487,271,303;INDEL;HRUN=1",Indel,0.002701
5015,28s,C,T,49314,PASS,"DP=213439;AF=0.039730;SB=17;DP4=91622,112044,3927,4553",Substitution,0.03973
5016,28s,G,A,19011,PASS,"DP=212925;AF=0.018354;SB=34;DP4=92838,111924,1660,2248",Substitution,0.018354
5016,28s,G,C,49314,PASS,"DP=212925;AF=0.006331;SB=3;DP4=92838,111924,627,723",Substitution,0.006331
5016,28s,G,T,49314,PASS,"DP=212925;AF=0.013512;SB=123;DP4=92838,111924,1110,1767",Substitution,0.013512
5017,28s,T,G,20602,PASS,"DP=212569;AF=0.032502;SB=37;DP4=92584,111727,2974,3936",Substitution,0.032502
5024,28s,G,A,2199,PASS,"DP=212565;AF=0.005824;SB=49;DP4=96469,114609,489,749",Substitution,0.005824
5026,28s,A,G,3144,PASS,"DP=211534;AF=0.011672;SB=0;DP4=95366,112179,1155,1365",Substitution,0.011672
5027,28s,G,A,23092,PASS,"DP=210753;AF=0.018334;SB=110;DP4=94702,110686,1996,1868",Substitution,0.018334
5027,28s,G,C,49314,PASS,"DP=210753;AF=0.006259;SB=11;DP4=94702,110686,574,745",Substitution,0.006259
5028,28s,C,T,650,PASS,"DP=210247;AF=0.003948;SB=51;DP4=96522,112284,319,511",Substitution,0.003948
5030,28s,C,A,644,PASS,"DP=209336;AF=0.004323;SB=184;DP4=96199,111061,287,618",Substitution,0.004323
5030,28s,C,T,1291,PASS,"DP=209336;AF=0.005259;SB=18;DP4=96199,111061,552,549",Substitution,0.005259
5031,28s,C,G,183,PASS,"DP=209067;AF=0.003970;SB=74;DP4=96456,110876,317,537",Substitution,0.00397
5033,28s,TC,T,6544,PASS,"DP=206999;AF=0.003778;SB=247;DP4=96763,111146,221,561;INDEL;HRUN=1",Indel,0.003778
5034,28s,C,T,2476,PASS,"DP=208222;AF=0.008025;SB=6;DP4=95497,109432,752,919",Substitution,0.008025
5035,28s,G,A,49314,PASS,"DP=205925;AF=0.032084;SB=100;DP4=93161,105238,3370,3237",Substitution,0.032084
5036,28s,C,A,141,PASS,"DP=205459;AF=0.004760;SB=94;DP4=96246,107486,364,614",Substitution,0.00476
5037,28s,TG,T,1646,PASS,"DP=203471;AF=0.001646;SB=9;DP4=97093,108076,144,191;INDEL;HRUN=1",Indel,0.001646
5039,28s,C,CAAA,151,PASS,"DP=202429;AF=0.003162;SB=4;DP4=97404,106125,295,345;INDEL;HRUN=1",Indel,0.003162
5039,28s,C,A,49314,PASS,"DP=204170;AF=0.007837;SB=332;DP4=95602,102975,529,1071",Substitution,0.007837
5039,28s,C,T,19961,PASS,"DP=204170;AF=0.019126;SB=292;DP4=95602,102975,1523,2382",Substitution,0.019126
5040,28s,G,A,49314,PASS,"DP=204422;AF=0.049921;SB=2;DP4=91987,99239,4875,5330",Substitution,0.049921
5042,28s,T,TTTGAG,1650,PASS,"DP=201873;AF=0.001659;SB=12;DP4=97752,105416,144,191;INDEL;HRUN=1",Indel,0.001659
5042,28s,T,C,5510,PASS,"DP=203503;AF=0.018098;SB=39;DP4=94622,103478,1877,1806",Substitution,0.018098
5046,28s,T,C,570,PASS,"DP=201002;AF=0.011582;SB=182;DP4=95424,101494,914,1417",Substitution,0.011582
5050,28s,A,C,1992,PASS,"DP=197035;AF=0.017697;SB=860;DP4=94907,98196,1132,2355",Substitution,0.017697
5056,28s,G,A,125,PASS,"DP=187474;AF=0.003147;SB=59;DP4=93050,93512,235,355",Substitution,0.003147
5057,28s,C,A,6015,PASS,"DP=185940;AF=0.009551;SB=164;DP4=92153,91950,711,1065",Substitution,0.009551
5058,28s,C,T,2663,PASS,"DP=183674;AF=0.008003;SB=311;DP4=91190,90504,513,957",Substitution,0.008003
5059,28s,C,T,1630,PASS,"DP=182279;AF=0.006369;SB=63;DP4=90770,90184,496,665",Substitution,0.006369
5061,28s,C,T,49314,PASS,"DP=177989;AF=0.035047;SB=270;DP4=86547,84617,2715,3523",Substitution,0.035047
5062,28s,G,GCA,5815,PASS,"DP=173367;AF=0.003807;SB=79;DP4=88351,86395,260,400;INDEL;HRUN=1",Indel,0.003807
5062,28s,G,A,49314,PASS,"DP=175409;AF=0.014258;SB=76;DP4=84769,82376,1127,1374",Substitution,0.014258
5062,28s,G,C,42182,PASS,"DP=175409;AF=0.031811;SB=62;DP4=84769,82376,2639,2941",Substitution,0.031811
5068,28s,A,C,198,PASS,"DP=164101;AF=0.013486;SB=1915;DP4=81122,79675,2096,577",Substitution,0.013486
5069,28s,G,A,327,PASS,"DP=163076;AF=0.005574;SB=128;DP4=82768,79174,353,556",Substitution,0.005574