tmRNA alignment

                ....|....| ....|....| ....|....| ....|....| ....|....| ....|....| ....|....|
                    5          15         25         35         45         55         65    
p-pre           aaaaaaa--- ---------- -bbbbb-bbb -------ddd dd---eeeee ---ffffffg gggg-----h
psknts          ---------- ---------- ---------- ---------- ---------- ---------( ((((((((((
hel-10          ---------- ---------- ---------- ---------- ---------- ---------- ----------
hel-1           1111111--- ---------- -222222222 -------222 2222222222 ---2222223 3333-----4
hel-x           ---------- ---------- -aaaaa-aaa -------bbb bb---ccccc ---dddddd- ----------
Aqui.aeol.      GGGGGCGga- aaggauu-cg aCGGGG-ACa ggcg---GUC Cc---cGAGG a--GCAGGCC GGG-------
Ther.mari.      GGGGGCGaa- -cggguu-cg aCGGGG-AUG ga-----GUC Cc---CUGGG aa-gCGAGCC GAGGu---cC
Chlo.aura.-1.   nnnnnnnnnn nnnnnnnnnn nnAGGG-AGU gaac---GCC G----UAGAC u--GCAGGUC GUGc----cG
Chlo.aura.-2.pa.---------- ---------- ---------- ---------- ---------- ---------- ----------
Ther.ther.      GGGGGUGaa- acggucu-cg aCGGGG-GUC gccga-gGGC Gu----GGCU ---GCGCGCC GAGGu----G
Dein.radi.      GGGGGUGac- ccgguuu-cg aCAGGG-Gaa cugaa--GGU G-----aUGU u--GCGUGUC GAGGu----G
Porp.ging.      GGGGCUGa-- ccggcuu-ug aCA-GC-GUG augaa--gCG GU----AUGU aa-GCAUGUA GUGCgu--gG
Bact.frag.      GGGGUUGa-- cugguuu-ug aCA-GC-GGG cagaa--AUg GU----GGGU aa-GCAUGCA GUGCgu--cG
Bact.fors.      GGGGCUGa-- ccgguuu-ug aCA-GC-GGG cagaa--gUG GU----UUGU aa-GCAUGCA GUGCgu--cG
Tann.fors.      GGGGCUGa-- ccgguuu-ug aCA-GC-GGG cagaa--gUG GU----UUGU aa-GcaUGCA GUGCgu--cG
Prev.inte.      GGGCUUGu-- auggauu-ug aCG-GC-AAG acgaa--AUg GU----AUGU aa-GCAUGCG GAGCau--uG
Cyto.hutc.      GGGGUCGa-- caggaau-ug aCAGGuuGAG -ugau-uAC- GU----GuGU aa-GCAUGCA GGCUc----a
Chlo.tepi.      GGGGAUGa-- caggcuaucg aCAGGA-UAg gugug-aGAU GU---cGUU- ---GCACUCC GAGUuucagC
Chla.psit.      GGGGGUGua- uagguuu-cg aCUUGG-aAA ugaag--UGU U-----AAUU ---GCAUGCG GAGGgc---G
Chla.pneu.      GGGGGUGua- uagguuu-cg aCUUGa-AAA ugaag--UGU U-----AAUU ---GCAUGCG GAGGgc---G
Chla.abor.      GGGGGUGua- uagguuu-cg aCUUAG-gAA ugaag--UGU U-----AAUc ---GCAUGCG GAGGgc---G
Chla.trac.      GGGGGUGua- aagguuu-cg aCUUAG-aAA ugaag--CGU U-----AAUU ---GCAUGCG GAGGgc---G
Chla.muri.      GGGGGUGua- aagguuu-cg aCUUAG-aAA ugaag--CGU U-----AAUU ---GCAUGCG GAGGgc---G
Osci.spec.      nnnnnnnnn- nnnnnnn-nn nnAGUG-GAG ugaaa--GCU gc---uCCGU gauuCAGGCC GAGAg----U
Anab.spec.      GGGUCcGu-- -cgguuu-cg aCAGGU-UGG cgaac--GCU aC---UCUGU gauuCAGGUC gAGAg----U
Chro.spec.      nnnnnnnnn- nnnnnnn-nn nnAGGU-UGG cgaaa--GCu Aa---UCUGU gauGCAGGUC GAGAg----U
Nost.punc.      GGGUCCGuc- acgguuu-cg aCAGGU-UGG cgaac--GCU gC---UCUGU gauuCAGGUC GAGAg----U
Frem.dipl.      nnnnnnnnn- nnnnnnn-nn nnAGGU-UGG cgaac--GCU gC---UCUGU gauuCAGGUC GAGAg----U
Plec.bory.      nnnnnnnnn- nnnnnnn-nn nnAGGU-UGG cgaac--GUU Cc---AUCGA gauGCAGGUC GAGAg----g
Tric.eryt.      GGGGCAUua- acgguuu-cg aCAGGG-UGG ugaa---AUC Ugc--uUUGU gauGCAGGcC GAGAg----U
Syne.spec.-1.   GGGGCCGca- augguuu-cg aCAGGU-UGG cgaaa--GCU Ugc---CCGU gauACAGGUC GAGAg----U
Syne.spec.-2.   GGGGCUGua- augguuu-cg aCGUGU-UGG ugaau--cCU Uca---CCGU gauuCAGGCC GAGAg----g
Syne.spec.-3.   GGGGCUGca- augguuu-cg aCGGGG-CAU ga----gGaG GG---UgACU --------ga aGCC------
Syne.spec.-4.   GGGGCUGca- augguuu-cg aCGGGG-CAU ga----gGaG GG---UgACU --------ga aGCC------
Proc.mari.-2.   GGGGCUGca- augguuu-cg aCGGGG-UAU ga----gGaG GG---UgACU --------ga aGCC------
Proc.mari.-1.   GGGGUUGua- augguuu-cg aCGGGG-CGU aa----ggaA GA---UgACU --------ga AGCC------
Syne.spec.-5.   GGGGCUGca- augguuu-cg aCGGGG-CAU ga----ggag gg---ugacu --------ga aGCC------
Syne.spec.-6.   GGGGCUGca- augguuu-cg aCGGGG-CAU ga----ggag gg---ugacu --------ga aGCC------
Cyan.para.cy.   GGGGCUGuu- uagguuu-cg aCGUUU-UUU ucu---aAUU AUg--UUUGU uaaGCAAGUC GAGGa----u
Porp.purp.cl.   GGGGCUGc-- aagguuu-cu aCAUUG-UGA aaaaa--CAA Au---AuAUG aaagUaAAAc GAGCu---ca
Odon.sine.cl.   GGGGCUGac- uugguuu-cg aCAUUU-AAA aauu---GUU Ac---AGUAU gauGCAGGUC GAAG------
Pavl.luth.cl.pa.ggggcuguu- uagguuu-cg auccua-aaa aaaac--uaa ua---agugu gaugcaaguA GAGG------
Boli.spec.pl.   nnnnnnnnn- nnnnnnn-nn nnAUUA-UAA aaauuu-UAA AUu--aUGAU ---GCAAGUC GAAA------
Guil.thet.cl.   GGGGCUGau- uuggauu-cg aCAUau-aAA uuugcguGuU UC---AUUAU gaaGCAAGUC AAG------U
Thal.weis.cl.   GGGGCUGau- uugguuu-cg aCAUUU-AAA acuu---CUU ucua-UgUGU ----CAGGUC AAAGuu---u
Meso.viri.cl.   GGGGUUGaa- augguuu-cg aCGUUU-UAG uaua---uAU CU---UCUUa caaGCAAGUC GAGAa----U
Recl.amer.mt.   GGGGAUGuuu uuaguauucg aCAUAG-UgG aa-----UUU AUuuguGGAA uuuUUAAAUu uuAuu----U
Fibb.succ.      GGGGGUGcu- cugguuu-cg aCAGGG-UUA ccgaa--GUg UU--aguUGC aaguCGAGgu cUcAg---ac
Trep.dent.      GGGGAUGuu- ccgguuu-cg aCCGGA-AAG acgga--GGc UU----AAGC u--GCAGGCG GAG------U
Trep.pall.      GGGGAUGac- uagguuu-cg aCUAGG-GAu guggg--GUG UU----GCGC u--GCAGGUG GAG------U
Borr.burg.      GGGGAUGuu- uuggauu-ug aCUGAA-AAU guuaa--UAU UG---UAAGU u--GCAGGCA GAGG------
Rhod.palu.      GGGGGCGaaa uaggau--cg aCGAG--GGc guaaa--gGG Cu---cGCUu ----UUUCCc GGUau----U
Magn.magn.-1.   GGGGGCGaaa uaggau--cg aCGA-G-GGc guaaa--gGG GG----AGCu u---UCGCUc GGCau----G
Magn.magn.-2.   GGGGGCGaaa uaggau--cg aCGUG--CGc aguaaa-gGU cU----GGUu u---GCGUUc GGCau----G
Rhod.rubr.      GGGGGCGaaa uaggau--cg aCACG--CGU gguaaa-gAU AA----AGGu u---GUGUUc GGCau---gG
Meth.exto.pa.   GGGGGCGaaa uaggau--cg a--------- ---------- ---------- ---------- ----------
Brad.japo.      GGGGGCGaaa uaggau--cg aCGAG--GGc guaaa--gGG CG---uGCUu ----UUUCCc GGUau----u
Meso.loti.      GGGGGCGaaa uaggau--cg aCGAA--GGU guaaa--gAU CG---uaCUu ----UUGCCc GGCau----u
Bruc.meli.      GGGGGCGaaa caggau--cg aCAA-G-GGU guaaa--gAU CG---cUCUu ----UUACUc GGCau----G
Sino.meli.      GGGGGCGaaa uaggau--cg aCAA-G-GGc guaaa--gAU CG---aCUUu ----UUGCUc GGCau----u
Rhiz.legu.      GGGGGCGaaa caggau--cg aCAA-G-GGU guaaa--gAU CG---uCUUu ----UUGCUc GGCau----u
Agro.tume.      GGGGGCGaaa uaggau--cg aCAA-G-GGc guaaa--gAU CG---aACUu ----UUGCUc GGCau----G
Caul.cres.      GGGGCCGau- cagcau--cg aCAGa--CGU guaaa--gGU GU---cUGCu u---UCUCUc GGCuu----G
Sili.pome.      GGGGCCGaaa caggau--cg aCGGa--CGU cuaaa--gGG GU---uaGCu u---UGUCUc GGCGg----G
Rhod.spha.      GGGGCCGaaa caggau--cg aCGAa--CGU cuaaa--GGg Gu---ugGCu u---UGUCCc GGUGa----G
Rick.prow.      GGGGGCGaaa uaggau--cg aCGU-G-CCU aauaaa-aAA GU----UGCu u---UUACUc GGuau----G
Rick.typh.      GGGGGCGaaa uaggau--cg aCGU-G-CCU aauaaa-aAA AU----UGCu u---UUACUc GGuau----G
Rick.cono.      GGGGGCGaaa uaggau--cg aCGU-G-CCU aauaaa-aAG AU----UGCu u---UUACUC GGGau----G
Sphi.arom.      GGGGCCGaac uaggau--cg aCGU-G-UGU ugaaa--aGC GU---UGUuu ----UCACCC GGGcu----G
Ehrl.chaf.      GGGGAUGaaa caggau--cg aC-AUG-CAU aguaaa-gGG GA--uaGUUU ----UUGCUC GGUga----G
Wolb.spec.      GGGGACGaau aaggau--cg aC-AUG-CAU agu----AaA Gau--GGUAG cu--UUGCUC GGUua----G
Chro.viol.      nnnnnnnnnn nnnnn---nn nCGGGG-GUU gcgaa--GCA Ga----UGAG g--GCAUACC GGGau---uU
Neis.gono.      GGGGGCGacc uugguuu-cg aCGGGG-GUU gcgaa--GCA GA----uGCG g--GCAUACC GGGGu---cU
Neis.meni.-1.   GGGGGCGacc uugguuu-cg aCGGGG-GUU gcgaa--GCA GA----uGCG g--GCAUACC GGGGu---cU
Neis.meni.-2.   GGGGGCGacc uugguuu-cg aCGAGG-GUU gcgaa--GCA GA----uGCG g--GCAUACC GGGGu---cU
Uncu.u02-.      nnnnnnnnnn nnnnnnnnnn nnGUGG-AUU gcaaa--GCU AU----cGAG g--GCGUGUC GAGGa----U
Nitr.euro.      GGGGGCGauc -cgguuu-cg aCGUGG-GUU gcaaa--GCA Gc----GCAG g--GCAUACC GAGGu----U
Meth.glyc.      nnnnnnnnnn nnnnnnnnnn nCGgGG-GUU gcaaa--GCA Gc----GCAG g--GCAUACC GAGGc----C
Nitr.cryo.      nnnnnnnnnn nnnnnnnnnn nCGUGG-GUU gcaaa--GCA Gc----GCAG g--GCAUACC GAGGa----C
Uncu.u04-.pa.   nnnnnnnnnn nnnnnnnnnn nngugg-guu gcaaa--gca gu----gcag g--gcauacC GAGGa----C
Alca.faec.      nnnnnnnnnn nnnnnnnnnn nCGgGG-GUC aagaa--GCA Gc----ACAG g--GCGUGUC GAGCa----C
Bord.para.      GGGGCCGauc -cggauu-cg aCGUGG-GUC augaa--aCA GC----uCAG g--GCAUGCC GAGCa----C
Bord.pert.      GGGGCCGauc -cggauu-cg aCGUGG-GUC augaa--aCA GC----uCAG g--GCAUGCC GAGC----aC
Bord.bron.am.   GGGGCCGauc -cggauu-cg aCGUGG-GUC augaa--aCA GC----uCAG g--GCAUGCC GAGCa----C
Coma.test.      GGGGCCGauu cuggauu-cg aCGUGG-GUU cggg---aCC GG---uGCGG u--GCAUGUC GAGCu----u
Hydr.pall.      nnnnnnnnnn nnnnnnnnnn nCGUGG-GUU cgga---cgC Gc---AGCAG g--GCAUGUC GAGGu-----
Vari.para.      nnnnnnnnnn nnnnnnnnnn nCGUGG-GUU cgga---GUC GC---aGCGG g--GCAUGUC GAGCu-----
Burk.pseu.      GGGGGCGacc -ugguuu-cg aCAGGG-GUu gugaa--GCG GC-----UAG g--GCAUGUC GAGGa----C
Burk.mall.      GGGGGCGacc -ugguuu-cg aCAGGG-GUu gugaa--GCG GC-----UAG g--GCAUGUC GAGGa----C
Burk.cepa.      GGGGGCGacc -ugguuu-cg aCAGGG-GUu gugaa--GCG GC-----UAG g--GCAUGUC GAGGa----C
Burk.fung.      GGGGGCGacc -ugguuu-cg aCAGGG-GUu gcgaa--GCG GC-----UAG g--GCAUGUC GAGGa----C
Alca.eutr.      uGGGCCGacc -ugguuu-cg aCGUGG--UU acaaa--GCA Gu-----GAG ---GCAUACC GAGGa----c
Rals.eutr.      nnnnnnnnnn nnnnnnnnnn nCGUGG-GUU acaaa--GCA Gu----GGAG g--GCAUACC GAGGa----C
Rals.meta.      GGGGCCGacc -ugguuu-cg aCGUGG-GUU acaaa--GCA Gu----GGAG g--GCAUACC GAGGa----C
Rals.sola.      GGGGCCGacc -ugguuu-cg aCGUGG-GUU gcgaa--GCA Gu----AGCG g--GCAUACC GAGGa----C
Rals.pick.      nnnnnnnnnn nnnnnnnnnn nCGgGG-GUU gcgaa--GCA Gc----GGAG g--GCAUACC GAGGa----C
Acid.ferr.-1.   GGGGGCGac- -cggcuu-cg aCGCAG-guC gcgaa--GCC uU---CGGu- ---GCAUGCA GAGCu----G
Acid.ferr.-2.   GGGGGCGac- -cggcuu-cg aCGCAG-guC gcgaa--GCC uU---CGGu- ---GCAUGCA GAGCu----G
Fran.tula.      GGGGGCGaau augguuu-cg aCAUGA-AUg ucaaa--AUC Uaa---GGu- ---GCAUGCC GAGGa---aG
Dich.nodo.      nnnnnnnnnn nnnnnnn-nn nnnnnn-nnn nnnnn--nCU cga---GGU- ---GCAUGUC GAGAa----U
Xyle.fast.-1.   GGGGGUGca- cuggcuu-cg aCGGGG-GUc acaaa--AUC aCu--UGGU- ---GCAUGCC GAGGg---gG
Xyle.fast.-2.   GGGGGUGca- cuggcuu-cg aCGGGG-GUc acaaa--AUC aCu--UGGU- ---GCAUGCC GAGGg---gG
Xyle.fast.-3.   GGGGGUGca- cuggcuu-cg aCGGGG-GUc acaaa--AUC aCu--UGGU- ---GCAUGCC GAGGg---gG
Xant.camp.      GGGGGUGca- cugguuu-cg aCGGGG-GUc gcgaa--GUC gCu--UGGC- ---GCAUGCC GAGGg---gG
Xant.axon.      GGGGGUGca- cugguuu-cg aCGGGG-GUc gcgaa--GUC gCu--UGGC- ---GCAUGCC GAGGg---gG
Legi.pneu.      nnnnnnnnnn nnnnnnn-nn nnGUGG-GUU gcaaa--aCC gga---AGU- ---GCAUGCC GAGA----ag
Coxi.burn.      GGGGGCGac- caggcuu-cg aCGUGG-AUC cugaa--aCC cga---GAC- ---GCAUGUC GAGCc---gG
Meth.caps.      GGGGGCGac- auggcuu-cg aCGUGG-AUC gcgaa--aCC uga---GGU- ---GCAUGCC GAGGu----G
Uncu.u01a.      nnnnnnnnnn nnnnnnnnnn nnGCUG-GuA acgga--aUC Cga---AGu- ---GCAUGCC GAGGu----G
Uncu.u01b.      nnnnnnnnnn nnnnnnnnnn nnGCUG-GuA acgga--aUC Cga---AGu- ---GCAUGCC GAGGu----G
Acin.ADP1.      GGGGAUGuua uuggcuu-cg aCGCUG-GUG augaa-gCUC aua---GAU- ---GCAUGCC GAGAg---cG
Micr.degr.      GGGGGCGau- uaggauu-cg aCGcCG-GUA acaaa-acCC Ga----AGU- ---GCAUGUC GUGAg---gG
Pseu.aeru.      GGGGCCGau- uaggauu-cg aCGCCG-GUa acaaa-acUU Ga----GGg- ---GCAUGCC GAGcu---gG
Azot.vine.      GGGGCCGau- uaggauu-cg aCGCCG-GUa acgaa-acUU Ga----GGg- ---GCAUGCC GAGUu---gG
Pseu.puti.      GGGGCCGau- uaggauu-cg aCGCCG-GUA gcgaa-acUc ua----GGU- ---GCAUGCC GAGUu---gG
Pseu.fluo.-1.   GGGGCCGuu- uaggauu-cg aCGCCG-GUu gcgaa-acUc ua----GGU- ---GCAUGCC GACUu---gG
Pseu.fluo.-2.   GGGGCCGuu- uaggauu-cg aCGCCG-GUc gcgaa-acUU ua----GGU- ---GCAUGCC GAGUu---gG
Pseu.syri.-1.   GGGGCCGau- uuggauu-cg aCGCCG-GUG augaa-acUU ua----GGU- ---GCAUGCC GAGUu---gG
Pseu.syri.-2.   GGGGCCGau- uuggauu-cg aCGCCG-GUG augaa-acUU ua----GGU- ---GCAUGCC GAGUu---gG
Mari.hydr.      nnnnnnnnnn nnnnnnn-nn nnGCCG-GUG acgaa-cCCU UG----GGU- ---GCAUGCC GAGAu---gG
Pseu.halo.      nnnnnnnnnn nnnnnnn-nn nnGGAA-uuC aagaa--GcC CG---aGGU- ---GCAUGUC GAGGu----G
Uncu.ww11.      nnnnnnnnnn nnnnnnnnnn aCAGGA-UuC acgaa-accC UG----GGa- ---GCAUGCC GAGG----gG
Shew.putr.      GGGGGCGauu cuggauu-cg aCAGGA-uuC acgaa-accC UG----GGa- ---GCAUGCC GAGG----gG
Colw.spec.      GGGGCGGauc uaggauu-cg aCAAGA-uuC augaa--acU Ca---aGGU- ---GCAUGCC CAGG----gG
Phot.phos.      nnnnnnnnnn nnnnnnnnnn nnAGGA--Uc acgaa-gGCu uG---UGGa- ---GCAUGUC GAGGu----G
Vibr.chol.      GGGGCUGauu caggauu-cg aCGGGA-AUU uugca--GUC Ug---aGGU- ---GCAUGCC GAGGu----G
Aero.salm.      nnnnnnnnnn nnnnnnn-nn nnAAGA-UUc acgaa--AcC Ca---aGGU- ---GCAUGCC GAGGu----G
Uncu.vlw3.      nnnnnnnnnn nnnnnnn-nn aCAAGA-UUc acgaa--AcC Ca---aGGU- ---GCAUGCC GAGGu----G
Uncu.vlw4.      nnnnnnnnnn nnnnnnn-nn aCAAGA-UUc acgaa--AcC Ca---aGGU- ---GCAUGCC GAGGu----G
Uncu.vls1.-3.   nnnnnnnnnn nnnnnnn-nn aCAAGA-UUc acgaa--AcC Ca---aGGU- ---GCAUGCC GAGGu----G
Uncu.rca3.      nnnnnnnnnn nnnnnnn-nn aCAAGA-UUc acgaa--AcC Ca---aGGU- ---GCAUGCC GAGGu----G
Uncu.vls1.-4.   nnnnnnnnnn nnnnnnn-nn aCAAGA-UUc acgaa--AcC Ca---aGGU- ---GCAUGCC GAGGu----G
Uncu.ww-9.      nnnnnnnnnn nnnnnnn-nn aCAAGA-UUc acgaa--AcC Ca---aGGU- ---GCAUGCC GAGGu----G
Uncu.ww10.      nnnnnnnnnn nnnnnnn-nn aCAAGA-UUc acgaa--AcC Ca---aGGU- ---GCAUGCC GAGGu----G
Uncu.vlw5.      nnnnnnnnnn nnnnnnn-nn gCAAGA-UUc acgaa--A-C Ca---aGGU- ---GCAUGCC GAGGu----G
Uncu.vlw6.      nnnnnnnnnn nnnnnnn-nn aCAAGA-UUc acgaa--AcC Ca---aGGU- ---GCAUGCC GAGGu----G
Uncu.rca4.      nnnnnnnnnn nnnnnnn-nn aCGGGA-cAC ucgaa--AcC Ca---aGGU- ---GCAUGCC GAGGu----G
Uncu.rca7.      nnnnnnnnnn nnnnnnn-nn aCGGGA-cAC ucgaa--AcC Ca---aGGU- ---GCAUGCC GAGGu-----
Uncu.rca8.      nnnnnnnnnn nnnnnnn-nn aCGGGA-cAC ucgaa--AcC Ca---aGGU- ---GCAUGCC GAGGu----G
Uncu.lem1.      nnnnnnnnnn nnnnnnn-nn aCGGGA-cAC ucgaa--AcC Ca---aGGU- ---GCAUGCC GAGGu----G
Uncu.lem2.      nnnnnnnnnn nnnnnnn-nn aCGGuA-cac uagaa--AaC Ca---aGGU- ---GCAUaCC GAGGu----G
Past.mult.      GGGGCUGauu cuggauu-cg aCGGGA-UUA gcgaa--GCC ca---aGGU- ---GCACGUC GAGGu----G
Mann.haem.      GGGGCUGauu uuggauu-cg aCGGGA-UUg gcgaa--GCC ca---aGGU- ---GCAUGUC GAGGu----G
Haem.somn.      GGGGCUGauu uuggauu-cg aCGGAA-UUA gcgaa--GCC ca---aGGU- ---GCACGUC GAGGu----G
Haem.infl.      GGGGCUGauu cuggauu-cg aCGGGA-UUA gcgaa--GCC ca---aGGU- ---GCACGUC GAGGu----G
Haem.ducr.      GGGGCUGauu cuggauu-cg aCGGGA-UUA gcgaa--GUC ca---aGGU- ---GCACGUC GAGGu----G
Acti.pleu.      GGGGCUGauu cuggauu-cg aCGGGA-UUA gcgaa--GUC ca---aGGU- ---GCACGUC GAGGu----G
Acti.acti.      GGGGCUGauu cuggauu-cg aCGGGA-UUa gcgaa--GCC cg---aAGU- ---GCACGUC GAGGu----G
Buch.aphi.      GGGGCUGuuu uuggauu-cg aCAAAG-UUa ucaaa-aAAG UA---AaGU- ---GCAUGCC GAGG----aA
Buch.APS-.      GGGGCUGuuu uuggauu-ug aCAAAA-UUa ucaac-aaAG UA---AAGU- ---GCAUGCC GAGG----aA
Esch.coli.-1.   GGGGCUGauu cuggauu-cg aCGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Esch.coli.-2.   GGGGCUGauu cuggauu-cg aCGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Esch.coli.-3.   GGGGCUGauu cuggauu-cg aCGGGA-UUU gcgaa--acC Ca---aGGU- ---GCAUGCC GAGG----gG
Prov.rett.      nnnnnnnnnn nnnnnnn-nn nnGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Salm.typh.-1.   GGGGCUGauu cuggauu-cg aCGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Salm.typh.-2.   GGGGCUGauu cuggauu-cg aCGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Salm.ente.-1.   GGGGCUGauu cuggauu-cg aCGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Salm.ente.-2.   nnnnnnnnnn nnnnnnn-nn aCGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Shig.flex.      GGGGCUGauu cuggauu-cg aCGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Shig.dyse.      GGGGCUGauu cuggauu-cg aCGGGA-UUU gcgaa--acC Ca---aGGU- ---GCAUGCC GAGG----gG
Salm.para.      GGGGCUGauu cuggauu-cg aCGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Erwi.caro.      GGGGCUGauu cuggauu-cg aCGGGA-UUu gcaaa--GCC ca---aGGU- ---GCAUGCC GAGG----gG
Erwi.chry.      GGGGCUGauu cuggauu-cg aCGGGA-UUC gcgaa--ACC ca---aGGU- ---GCAUGCC GAGG----gG
Kleb.pneu.      GGGGCUGauu cuggauu-cg aCGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Uncu.rca1.      nnnnnnnnnn nnnnnnn-nn aCaAGA-UUc acgaa--ACC ca---aGGU- ---GCAUGCC GAGGu----G
Uncu.vls1.-1.   nnnnnnnnnn nnnnnnn-nn aCAGGA-UUu gcaaa--GCC cU---aGGa- ---GCAUGCC GAGG----gG
Uncu.vls3.      nnnnnnnnnn nnnnnnn-nn aCAGGA-UUu gcaaa--GCC cU---aGGa- ---GCAUGCC GAGG----gG
Uncu.vls4.      nnnnnnnnnn nnnnnnn-nn aCAGGA-UUu gcaaa--GcC CU---aGGa- ---GCAUGCC GAGG----gG
Uncu.ww-1.      nnnnnnnnnn nnnnnnn-nn aCGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GGGG----gG
Uncu.rca2.      nnnnnnnnnn nnnnnnn-nn aCGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Uncu.ww-2.      nnnnnnnnnn nnnnnnn-nn aCGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GGGG----gG
Uncu.ww-3.      nnnnnnnnnn nnnnnnn-nn aCGGGA-UUC gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Uncu.ql-1.      nnnnnnnnnn nnnnnnn-nn aCGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Uncu.ww-4.      nnnnnnnnnn nnnnnnn-nn aCGGGA-UUC gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Uncu.vls1.-2.pa.---------- ---------- ---------- ---------- ---------- ---------- ----------
Uncu.vls5.      nnnnnnnnnn nnnnnnn-nn aCGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Uncu.fs-1.      nnnnnnnnnn nnnnnnn-nn aCGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Uncu.vls6.      nnnnnnnnnn nnnnnnn-nn aCGGGA-UUU gcgaa--AcC Ca---aGaU- ---GCAUGCC GAGG----gG
Uncu.fs-2.      nnnnnnnnnn nnnnnnn-nn aCGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Uncu.ww-5.      nnnnnnnnnn nnnnnnn-nn aCGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Uncu.ww-6.      nnnnnnnnnn nnnnnnn-nn aCGGGA-UUC gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Uncu.vlw1.      nnnnnnnnnn nnnnnnn-nn aCGGGA-aUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Uncu.vls7.      nnnnnnnnnn nnnnnnn-nn aCGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Uncu.vls8.      nnnnnnnnnn nnnnnnn-nn aCGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GaGG----gG
Uncu.vls9.      nnnnnnnnnn nnnnnnn-nn aCGGGA-UUu gcgaa--GCC cU---aGGa- ---GCAUGCC GAGG----gG
Uncu.vlw2.      nnnnnnnnnn nnnnnnn-nn aCGGGA--Uu gugaa--GCC uU---aGGa- ---GCAUGCC GAGG----gG
Uncu.ww-7.      nnnnnnnnnn nnnnnnn-nn aCGGGA-UUC gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG----gG
Uncu.ww-8.      nnnnnnnnnn nnnnnnn-nn aCGGGA-UUU gcgaa--AcC Ca---aGGU- ---GCAUGCC GAGG-----G
Yers.ente.      GGGGCUGauu cuggauu-cg aCGGGA-UUc gcgaa--aCC caa---GGU- ---GCAUGCC GAGG-----U
Yers.pest.      GGGGCUGauu cuggauu-cg aCGGGA-UUc gcgaa--ACC ca---aGGU- ---GCAUGCC GAGG-----U
Desu.vulg.      GGGGGCGca- cugguuu-cg aCGGGG-AcG uagaa--GcC GG----AGUu ---GCAGGCC GAGGc-----
Desu.desu.      nnnnnnnnnn nnnnnnn-nn nnGGGG-ACG uggaa--GcC Gu----AGCG ---GCAGGUC GAGGc-----
Geob.sulf.      GGGGGUGua- cagguuu-cg aCGGGG-AUa g-gaa--GCU GAu---GGUu ---GCAUGCC GAGGu----C
Geob.meta.      GGGGGUGua- cagguuu-cg aCGGGG-AUa g-gaa--ACu aAa---GGUu ---GCAUGCC GAGGu----C
Heli.pylo.      GGGGCUGac- uuggauuucg aCAGAu-uUC uuguc--GCA CA----GAUa ---GCAUGCC AAGC------
Camp.jeju.      GGGAGCGac- uuggcuu-cg aCAGGA-GUA agucu--gCU UA----GAUg ---GCAUGUC GCUU------
Fuso.nucl.-1.   GGGGAUGca- aagguuu-cg aCGGGG-UUG ugagg--UUA UA----GGUa ---GCAAGUC AGgC------
Fuso.nucl.-2.   GGGGAUGca- aagguuu-cg aCGGGG-UUG ugagg--UUA UA----GGUa ---GCAAGUC AGgU------
Fuso.nucl.-3.   GGGGACGca- aagguuu-cg aCGGGG-UUG ugagg--UUA UA----GGUa ---GCAAGUC AGgU------
Stre.coel.      GGGGAUGau- -cgguuu-cg aCAGCGgcUG ucgaa--gCA GG----gGaa ---gCGUGUC GAGGaa--gC
Ther.fusc.      GGGGGUGau- -cgguuu-cg aCUUCG-AUG guuguu-GUA GG----gGaa ---gCGGGCC GAGGaga-gC
Trop.whip.      GGGGAUGac- -ugguuu-cg aCGcU--GUu uguguacUCG UG----gGaa ---GCGGGUC GAGGau---G
Myco.lepr.      GGGGCUGaa- -agguuu-cg aCUuCGcGCA ucgaa--UCA AG----gGaa ---gCGUGCC GGUGca--gG
Myco.aviu.      GGGGCUGaa- -cgguuu-cg aCUuCGcGCA ucgaa--UCA AG----gGaa ---gCGUGCC GGUGca--gG
Myco.tube.      GGGGCUGaa- -cgguuu-cg aCUuCGcGCA ucgaa--UCA AG----gGaa ---gCGUGCC GGUGca--gG
Myco.bovi.      GGGGCUGaa- -cgguuu-cg aCUuCGcGCA ucgaa--UCA AG----gGaa ---gCGUGCC GGUGca--gG
Myco.mari.      GGGGCUGaa- -cgguuu-cg aCUuCGcGCA ucgaa--UCA AG----gGaa ---gCGUGCC GGUGca--gG
Myco.smeg.      GGGGCUGaa- -cgguuu-cg aCUuCGaGCA ucgaa--UCc AG----gGaa ---gCGUGCC GGUGca--gG
Cory.diph.      GGGGCUGauu uugguuu-cg aCUGCGugCA uuaa---GCU AG---gGGaa ---gCGUGCC GGUGca--gG
Cory.glut.      GGGGCUGa-c augguuu-cg aCUACG-UUG auuua--GCC AG---gGGaa ---gCGUGCC GGUGaa--gG
Desu.hafn.      GGGGGUGca- cuggcuu-cg aCGGGGguCG caaaa--UCg CU----UGGC ---GCAUGCC GAGGg----G
Deha.ethe.      GGGGACGcg- -ugguuu-cg aCAGGGaAGG ua-----GGC Ua-cuGGAUU ---GCaGgcU GAGGu----G
Heli.mobi.      ggggaacg-- --uguuu--g cUuGGG-AuG cg----aGCC -----GGGuU ---GCc-GCC -agg-----a
Baci.halo.      GGGGACGuua -cggauu-cg aCAGGG-AUG gaucg-aGCU UA----AGUg ---GCGAGCC GAGg-----U
Baci.stea.      GGGGACGauc -cggauu-cg aCAGGG-GUA ggucg-aGCU UA----AGCG ---GCGAGCC GAGGg----g
Baci.mega.      nnnnnnnnnn nnnnnnn-nn nnAGGG--UA guucg-aGCU UA----GGUu ---GCGAGUC GAGG-----a
Baci.subt.      GGGGACGuu- acggauu-cg aCAGGG-AUG gaucg-aGCU UG----AGCu ---gCGAGCC GAGA------
Stap.sapr.      nnnnnnnnnn nnnnnnnnnn nnnnnG-GUU ccaug-aGCU AG----UUaa ---GCGUGUC GAAG----gG
Stap.epid.      GGGGACGuuc uuggauu-cg aCAGGG-GUC ccccg-aGCu uA----UUaa ---GCGUGUC GGAG----gG
Stap.aure.-1.   GGGGACGuuc auggauu-cg aCAGGG-GUC ccccg-aGCu CA----UUaa ---GCGUGUC GGAG----gG
Stap.aure.-2.   GGGGACGuuu cuggauu-cg aCAGGG-GUC ccccg-aGCu CA----UUaa ---GCGUGUC GGAG----gG
Stap.aure.-3.   GGGGACGuuc auggauu-cg aCAGGG-GUa ccccg-aGCu CA----UUaa ---GCGUGUC GGAG----gG
Stap.aure.-4.   GGGGACGuuc auggauu-cg aCAGGG-GUC ccccg-aGCu CA----UUaa ---GCGUGUC GGAG----gG
Stap.aure.-5.   GGGGACGuuc auggauu-cg aCAGGG-GUC ccccg-aGCu CA----UUaa ---GCGUGUC GGAG----gG
Stap.xylo.      nnnnnnnnnn nnnnnnnnnn nnnnnG-GUU ccaug-aGCU AG----UUaa ---GCGUGUC GGAG----gG
Baci.anth.      GGGGACGuu- acggauu-cg aCAGGG-AUA guucg-aGCU UA----GGUU ---GCGAGUC GAGG-----G
List.inno.      GGGGAUGuu- acggauu-cg aCAGGG-AUA guucg-aGCU UG----AGUu ---GCGAGUC GGGG-----G
List.mono.      GGGGAUGuu- acggauu-cg aCAGGG-AUA guucg-aGCU UG----AGUu ---GCGAGUC GGGG-----G
List.gray.-1.   nnnnnnnnn- nnnnnnn-nn aCAGGG-AUA guucg-aGCU UG----AGUu ---GCGAGUC GGGG-----G
List.gray.-2.   nnnnnnnnn- nnnnnnn-nn aCAGGG-AUA ggucg-aGCU UG----AGUu ---GCGAGCC GGGg-----G
List.ivan.      nnnnnnnnn- nnnnnnn-nn aCAGGG-AUA guucg-aGCU UG----AGUu ---GCGAGUC GGGG-----G
List.seel.      nnnnnnnnn- nnnnnnn-nn aCAGGG-AUA guucg-aGCU UG----AGUu ---GCGAGUC GGGG-----G
List.wels.      nnnnnnnnn- nnnnnnn-nn aCAGGG-AUA guucg-aGCU UG----AGUu ---GCGAGUC GGGG-----G
Leuc.mese.      nnnnnnnnnn nnnnnnnnnn nnnnnU-CGU uuaga--GCA UU----GAUu ---GCGUUUC GCCa------
Leuc.pseu.      nnnnnnnnnn nnnnnnnnnn nnnnnU-CGU uuaga--GCA UU----GcCu ---GCGUUUC GCCg------
Leuc.lact.      nnnnnnnnnn nnnnnnnnnn nnnnnC-UGU uuagg--GCA UG----GACU ---GCGUUUC GCCa------
Lact.delb.      nnnnnnnnn- nnnnnnnnnn nnAAGC-ACA guucg-aGCU UG----AaUU ---GCGUUUC GUAG-----G
Lact.gass.      GGGGAUGuuu ugggauu-cg aCAGGC-GUA gauuc--gCG UU----gaCU ---GCGAUUC GUAG-----G
Lact.sake.      GGGGCCGuu- acggauu-cg aCAUGU-GUA gguga--GCG Ug----aaUU ---GCACUUC GUAG-----G
Lact.helv.      nnnnnnnnnn nnnnnnnnnn nnnnnC-GUA gauuc--gCA UU----GACU ---GCGAUUC GUAG-----G
Lact.gall.      nnnnnnnnnn nnnnnnnnnn nnnnnC-GUA gauuc--gCA UU----GA-U ---GCGAUUC GUAG-----G
Lact.plan.-1.   nnnnnnnnnn nnnnnnnnnn nnnnnU-AUA guuug--agU Uc----GAUu ---GCGCUUC GUAu-----G
Carn.pisc.pa.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Ente.faec.-1.   GGGGGCGuu- acggauu-cg aCAGGC-AUA guuga--GCU UG----AAUU ---GCGUUUC GUAG-----G
Ente.faec.-2.   GGGGACGuu- acggauu-cg aCAGGC-ACA gucga--GCU UG----AAuu ---GCGUUUC GUAG-----G
Ente.dura.      nnnnnnnnnn nnnnnnnnnn nnnnnC-ACA guucga-GCU UG----AAuu ---GCGUUUC GUAG-----G
Oeno.oeni.      GGGGUAGuu- ccggaauucg aCAGGU-UAU uacaa--GCA UG----GAUu ---GCGUU-C CCG-------
Lact.lact.-1.   nnnnnnnnnn nnnnnnnnnn nnnnnC-AUU gucgc--GCA Ug----AACu ---GCAACUg CUG------a
Lact.lact.-2.   nnnnnnnnnn nnnnnnnnnn nnnnnC-AUU gucgc--GCA Ug----AACu ---GCAACUg CUG------a
Lact.lact.-3.   nnnnnnnnnn nnnnnnnnnn nnnnnC-AUU gucgc--GCA Ug----AACu ---GCAACUg CUG------a
Lact.lact.-4.   nnnnnnnnnn nnnnnnnnnn nnnnnC-AUU gucgc--GCA Ug----AACu ---GCAACUg CUG------a
Lact.garv.      nnnnnnnnnn nnnnnnnnnn nnnnnC-AUU gucgc--GCA Ug----AACu ---GCAACUG GUG------G
Lact.plan.-2.   nnnnnnnnnn nnnnnnnnnn nnnnnU-GUU gucgc--GUA Ug----AGCu ---GCGAUUA GUG-------
Pedi.pent.      GGGGUCGuu- auggauu-cg acaggu-aug ggucga-GCC AU----GACu ---GCAUUUC GUAG-----g
Lact.raff.      nnnnnnnnnn nnnnnnnnnn nnnnnU-GUU gucgc--GUA Ug----AGCu ---GCGAUUA GUG-------
Stre.equi.      GGGGUUGuu- acggauu-cg aCAGGC-AUU augag--GCC UA----UUUu ---GCAACUC AUC-------
Stre.uber.      GGGGUUGuu- acggauu-cg aCAGGC-ACU augag--GCA UG----UUUu ---GCAACUC AUC-------
Stre.pyog.      GGGGUUGuu- acggauu-cg aCAGGC-AUU augag--GCA UG----UUUu ---GCGUCCC AUC-------
Stre.suis.pa.   gggguuguu- acggauu-cg acaggc-auu augag--gcu ug----uucu ---gcaacuC AUC-------
Stre.ther.      nnnnnnnnnn nnnnnnnnnn nnnnnC-AUU augag--GCA UA----UUCu ---GCGACUC GUg------U
Stre.gord.      GGGGUCGuu- acggauu-cg aCAGGC-AUU augag--GCA UA----UUUu ---GCGACUC AUC------U
Stre.miti.      GGGGUCGuu- acggauu-cg aCAGGC-AUU augag--GCA UA----UUUu ---GCGACUC GUg------U
Stre.pneu.      GGGGUCGuu- acggauu-cg aCAGGC-AUU augag--GCA UA----UUUu ---GCGACUC GUg------U
Stre.muta.      GGGGUCGuu- acggauu-cg aCAGGC-AUU augag--ACC UA----UUUu ---GCGACUC AUC------U
Myco.capr.      GGGGAUGuc- auggauu-ug aCAGGA-UAU cuuua--GUA CA---UAUaa ---GCA-GUA GUGUu---gU
Urea.urea.      GGGGAUGuc- acgguuu-cg aCGUGA-CAC auua---AUU uu---UAAUu ---GCA-GUG GGGUu---aG
Spir.kunk.      GGGGAUGuu- ccgguuu-cg aCAgGA-AUG aucu---aCU AA---UAUUg ---GCA-GUA GUuUa---gU
Myco.geni.      GGGGAUGuu- uuggguu-ug aCAUAA-uGc ugauag-ACA AA---CAGUa ---GCA-UUG GGG------U
Myco.pneu.      GGGGAUGua- gagguuu-ug aCAUAA-uGu ugaaag-gAA AA---CAGUU ---GCA-GUG GGG------U
Myco.pulm.      GGGGAUGua- augguuu-cg aCAgGC-AUU uauaa---cC UU---AUAAu ---GCA-GUA GUUU-----G
Clos.ther.      GGGGGCGua- uugguuu-cg aCGGGA-UUG uugaag-cUU G-----AGUa ---gCGGGUA GAGGa----U
Ther.teng.      GGGGGUGug- uugguuu-cg aCGGGG-GCG gucga--GGU AA---AAGUa ---gCGAGCC GAGUu----c
Clos.perf.      GGGGGCGuu- uuggcuu-cg aCGGGG-GUA a------GaU GGguuuGAUa a--GCGAGUC GAGGg--aaG
Clos.botu.      GGGGGCGca- augguuu-cg aCGGGG-GCA aauug-cUCC UG----GGaA ---gCGAGUC GaAGg--gaU
Clos.diff.      GGGG-CGua- aagguuu-cg aCGUGG-GUU ugga---aCU UGa---gGCu ---GCAUGUC GUGu---uaC
Clos.acet.-1.pa.---------- ---------- ---------- ---------- ---------- ---------- ----------
Clos.acet.-2.   GGGGGCGcuu uugguuu-cg aCGGGG-AUG auguua-CGU UU---GAGaA ---gCGAGUC GaGGg-aacC
Rumi.albu.      GGGGAUGu-g aagguuu-cg aCGGGG-GUC uug----UAU Ggc--GAUaa ---GCGAGUG GaGG-----a
Carb.hydr.      GGGGGCGu-a aaggguu-cg aCGGGGgaGC gaa----GGG CCga-AAGUa ---gCGAGGC GAGG---acC
support         ---------- ---------- -SSSSS-SSS -------SSS S-----SSS- ---SSSSSSS SSSS-----S

                ....|....| ....|....| ....|....| ....|....| ....|....| ....|....| ....|....|
                    75         85         95        105        115        125        135    
p-pre           hhhhhh---- ---ggggg-- ---------h hhhhhh---- ---------- ---------- ----------
psknts          (((((((((p seudoknot- I))))))))) ))))))---- ---------- ---------- -----rrr--
hel-10          ---------- ---------- ---------- ---------- ---------- ---------- ----------
hel-1           444444---- ---33333-- ---------4 444444---- ---------- ---------- ----------
hel-x           ---------- ---------- ---------- ---------- ---------- ---------- ----------
Aqui.aeol.      UGGCU----- ----CCCGua ac-------- AGCCG----- ---------- -------cua aaacagcucc
Ther.mari.      CCACCU---- ---CCUCGua aaaa-----A GGUGGGacaa ---------- ------agaa uaagugccaa
Chlo.aura.-1.   CCCagU---- ----CACGua aaa------G --GGGCaa-- ---------- -----ggcaa caacugccaa
Chlo.aura.-2.pa.---------- ---------- ---------- ---------- ---------- ---------- ----------
Ther.ther.      CGGGUg---- --gCCUCGua aaa------- ACCCGCaac- ---------- ------ggca uaacugccaa
Dein.radi.      CCGUUg---- --gCCUCGua aaca------ AACGGCaaag c--------- ------cauu uaacuggcaa
Porp.ging.      GUGgCU---- --uGCACUau aau---cucA GaCAUCaaa- ---------- ------aguu uaauuggcga
Bact.frag.      GUGAUU---- --uGCACUuu aau---cucA GUUAUCaaa- ---------- ------auuu uaucuggcga
Bact.fors.      UUGGCC---- --gGCACUuu aau---cucG GUUGAUcca- ---------- ------auuu uaacuggcga
Tann.fors.      UUGGCC---- --gGCACUuu aau---cucG GUUGAUccaa ---------- -------uuu uaacuggcga
Prev.inte.      GUAGCU---- --gGCUCCua aau---aucG GUUAUCaaa- ---------- ------caau uaauuggcga
Cyto.hutc.      UGGGAUga-- --gAGCCUua aaag--auaG UUCCGa---- ---------- ------acaa uaauuggcga
Chlo.tepi.      AUGGACg--- --gACUCGuu aaac---aaG UCUAUGua-- ---------- ------ccaa uagaugcaga
Chla.psit.      UUGGCUg--- --gCCUCCua aaa------A GCCGACaaa- ---------- ------acaa uaaaugccga
Chla.pneu.      UUGGCUg--- --gCCUCCua aaa------A GCCAACaaa- ---------- ------acaa uaaaugccga
Chla.abor.      UUGGCUg--- --gCCUCCua aaa------A GCCGACaaa- ---------- ------acaa uaaaugccga
Chla.trac.      UUGGCUg--- --gCCUCCua aaa------A GCCGACaaa- ---------- ------acaa uaaaugccga
Chla.muri.      UUGGCUg--- --gCCUCCua aaa------A GCCGACaaa- ---------- ------acaa uaaaugccga
Osci.spec.      GAGUUGu--- --cUCUCGuc aaucc---cC AACUCAaaaa a--------- ------aaag uaaaugcgaa
Anab.spec.      GAGUCUc--- --cUCU-Gca aauca----A GGCUCAaaac a--------- ------aaag uaaaugcgaa
Chro.spec.      GAGUCgc--- --cUCUCGga aauac----a GGCUCAaauc ua-------- ------aaua uagaugcaaa
Nost.punc.      GAGUCUc--- --cUCUCGga aauca---aA GGCUCAaaca a--------- ------aaag uaaaugcgaa
Frem.dipl.      GAGUCUc--- --cUCUCGca aaucc---aA GGCUCAaaac a--------- ------aaag uaaaugcgaa
Plec.bory.      GAGUCca--- --cUCUCGua aaucu----a GGCUCaaaaa a--------- ---------a uagaugcaaa
Tric.eryt.      GAGUCUu--- --cUCUCGaa aauc---cuG GACUCAaaaa ---------- ------auaa uaagugcaaa
Syne.spec.-1.   GAGUCUc--- --cUCUCGca aauca---aA GGCUCAaaaa ---------- ------aaag uaacugcgaa
Syne.spec.-2.   GAGUCca--- --cUCUCGua aaucc----a GGCUCaacca ---------- ------aaag uaacugcgaa
Syne.spec.-3.   -UGCUC---- ---GGUca-- ---------G AGCGaa---- ---------- ------cccg uaacagcgaa
Syne.spec.-4.   -UGCUC---- ---GGUga-- ---------G AGCAaa---- ---------- ------cccg uaacugcgaa
Proc.mari.-2.   -UGCUC---- ---GGUaa-- ---------G AGCAaa---- ---------- ------uccg uaacugcgaa
Proc.mari.-1.   -UGCUC---- ---GGUUa-- ---------G AGCAaa---- ---------- ------aaca caaacgcuaa
Syne.spec.-5.   -UGCUC---- ---GGUaa-- ---------G AGCGaa---- ---------- ------cccg uaacagcgaa
Syne.spec.-6.   -UGCUC---- ---GGUca-- ---------G AGCGaa---- ---------- ------cccg uaacagcgaa
Cyan.para.cy.   UUgUUcu--- --aUCUCGaa aau------c AAgAAcucuc aa-------- ------aauu uaaacgcaac
Porp.purp.cl.   UUAUUag--- --aGCUUuua gu------ua AAUAA----- ---------- ---------- ---augcaga
Odon.sine.cl.   UUUCUaa--- --uCUUCGua aaaaa----- AGAGAaauuu ---------- ------auaa uaaaugcuaa
Pavl.luth.cl.pa.-----aaa-- --cCCUCUua aaaaa----- aaagcaa--- ---------- ------acaa uaaaugcaaa
Boli.spec.pl.   aAUAUU---- --aUUUCGuu aaaa-----A AUAUaccuuu ---------- ------aaaa uaaaugcaaa
Guil.thet.cl.   UUAAUGa--- ---uCUUGua aaaaa----C AUUAAAgua- ---------- ------caaa uaaaugcaag
Thal.weis.cl.   GUAUU----- ---CUUUGua aaaa------ AAUACuaaaa ua-------- ------cuaa uaaaugcuaa
Meso.viri.cl.   GAACca---- --aUCUCGua aacuu----g aGUUCAauug ---------- ------caaa uaaaugcuaa
Recl.amer.mt.   UUUUaUcu-- --acUuu-ua a--------G -AAGGAuuuu uu---aaaaa caccuuguua aauaaguaaa
Fibb.succ.      gAGGgCaa-- --cUcGuuaa aaa------G -UCUgaa--- ---------- ----aaaaaa uaagugcuga
Trep.dent.      GCCGA----- ---uCUCCug a--------u UCGGCAaa-- ---------- -----cacua uaacugccga
Trep.pall.      GUCGA----- ---uCUCCug a--------u UCGGCGcc-- ---------- ------uuua uaacugccaa
Borr.burg.      ---GAA---- ---UCUCUua aaa-----cU UCu------- ---------- ------aaaa uaaaugcaaa
Rhod.palu.      GuUCCG---- --ccGUUau- ---------C GGGcUAcu-- ---------- ------gcaa uaguugccaa
Magn.magn.-1.   GuUCCG---- --ccGUUau- ---------C GGGcCUuu-- ---------- ------gcaa uaguugccaa
Magn.magn.-2.   AUaCCa---- --ccGUUau- ---------c GG-GUCaauc ---------- ------cuaa caagugccaa
Rhod.rubr.      uaUCCa---- --ccGUUau- ---------c GGG-cCaacu ---------- ------cuga caagugccaa
Meth.exto.pa.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Brad.japo.      GUuCCG---- --ccGUUau- ---------C GG-GCuacu- ---------- ------gcaa uaguugccaa
Meso.loti.      GUaCCa---- --ccGUCau- ---------c GG-GCuaaa- ---------- ------cuua uaguugccaa
Bruc.meli.      AUaCCa---- --ccGUUau- ---------c GG-GUCaac- ---------- ------agag uaguugcaaa
Sino.meli.      GUaCCa---- --ccGUUau- ---------c GG-GCuaaa- ---------- ------cuua uaguugcaaa
Rhiz.legu.      GUaCCG---- --ccGUUau- ---------C GG-GCuaaa- a--------- -------uug uaguugcaaa
Agro.tume.      AUaCCG---- --ccGUUau- ---------C GG-GUCaca- ---------- ------agug uaguugcaaa
Caul.cres.      G-CCCa---- --ccGUU-u- ---------c GGG-CCuuu- ---------- -------auc uaaaugcgaa
Sili.pome.      GuACCa---- --cCGUUau- ---------c GGU-CCgcaa a--------- -------gca uaauugccaa
Rhod.spha.      GuACCa---- --cCGUUau- ---------c GGU-CCgaa- ---------- -----aagua caguugccaa
Rick.prow.      AuUCCAccgg u-gguUUuug ccaua----U GGA-UCaaaa ---------- ------caaa gaaacgcaaa
Rick.typh.      AuCCCAccga u-ggcUUuug ccaua----U GGG-UCaaaa ---------- ------caaa gaaacgcaaa
Rick.cono.      AuUCCGccga u-ggCUUGug ccaua----U GGG-UCaaaa ---------- ------caaa gaaacgcaaa
Sphi.arom.      AGU------- --aaCCCGuu caa------- -gGCUCaaa- ---------- -----acuca caagugccaa
Ehrl.chaf.      AaaAc----- ---aGCCGuu uaaa------ -UgcUCaaaa u--------- -------uua uaagugcaaa
Wolb.spec.      ACaC------ ---cACCGcu aa-------- -GaGUUcau- ---------- ------aauu uaaaugcaaa
Chro.viol.      CAGUc----- --acCCCGua aaac------ -GCUGAauu- ---------- ------uaua uagucgcaaa
Neis.gono.      CAGaU----- ---UCCCGua aaac------ A-CUGAauu- ---------- ------caaa uagucgcaaa
Neis.meni.-1.   CAGaU----- ---UCCCGua aaac------ A-CUGAauu- ---------- ------caaa uagucgcaaa
Neis.meni.-2.   CAGaU----- ---UCCCGua aaac------ A-CUGAauu- ---------- ------caaa uagucgcaaa
Uncu.u02-.      CAGuUa---- ---CCUCGua aauc-----c AuCUGAaaa- ---------- ------acag uaaacgcaaa
Nitr.euro.      CAGUa----- --cCCUCGua aaac------ aGCUGAaaa- ---------- ------aaaa uagucgcaaa
Meth.glyc.      UAGUca---- ---CCUCGua aauaa----- -ACUAGaaca ---------- ------agua uagucgcaaa
Nitr.cryo.      CAGAaUa--- ---CCUCGua aauac----A -UCUGGaaa- ---------- ------aaaa uagucgcaaa
Uncu.u04-.pa.   UAGUca---- ---CCUCGua aaucc----- -ACUGGaaca a--------- ------guua uagucgcaaa
Alca.faec.      CAGUac---- ---GCUCGua aaucc----- -ACUGGaaa- ---------- ------acua uaaacgccaa
Bord.para.      CAGUaa---- ---GCUCGuu aaucc----- -ACUGGaac- ---------- ------acua caaacgccaa
Bord.pert.      CAGUaa---- ---GCUCGuu aauc------ cACUGGaac- ---------- ------acua caaacgccaa
Bord.bron.am.   CAGUaa---- ---GCUCGuu aauc------ cACUGGaac- ---------- ------acua caaacgccaa
Coma.test.      GAGUGac--- ---GCUCGua aaucuc---- CAUUCaaa-- ---------- ------aaac uaacugcaaa
Hydr.pall.      UCUGuC---- --aCCUCGua aauca----G -CAGAaaa-- ---------- ------aaac caacugcaaa
Vari.para.      GAAUgC---- ---GCUCGua aaaca----G -AUUCaaac- ---------- ------aaac uaacugcaaa
Burk.pseu.      CCGUca---- ---CCUCGuu aauca----- -AUGGGaaa- ---------- ------aacg uaacugcaaa
Burk.mall.      CCGUca---- ---CCUCGuu aauca----- -AUGGGaaa- ---------- ------aacg uaacugcaaa
Burk.cepa.      CCGUca---- ---CCUCGuu aauca----- -AUGGGaaa- ---------- ------aucg uaacugcaaa
Burk.fung.      CCGUca---- ---CCUCGuu aauca----- -AUGGGaaa- ---------- ------aacg uaacugcaaa
Alca.eutr.      CCGUca---- ---CCUCGuu aauca----- -AUGGaau-- ---------- ------gcaa uaacugcuaa
Rals.eutr.      CCGUca---- ---CCUCGuu aauca----- -AUGGGaau- ---------- ------gcaa uaacugcuaa
Rals.meta.      CCGUca---- ---CCUCGuu aauca----- -AUGGGaau- ---------- ------gcaa uaacugcuaa
Rals.sola.      CCGUca---- ---CCUCGuu aauca----- -AUGGGaac- ---------- ------gcaa uaacugcuaa
Rals.pick.      CCGUca---- ---CCUCGuu aauca----- -AUGGGaau- ---------- ------gcaa uaacugcuaa
Acid.ferr.-1.   CGGUUc---- ---GCUCUua aaacu----- GGUCGCaga- ---------- ------uuca uaauugccaa
Acid.ferr.-2.   CGGUUc---- ---GCUCUua aaacu----- GGUCGCaga- ---------- ------uuca uaauugccaa
Fran.tula.      UACcGU---- -aaCCUCGuu aaua-----A CaGUACaaa- ---------- -ugccaauaa uaacuggcaa
Dich.nodo.      GAGAG----- -aaUCUCGuu aaaua----- CUUUCAaaa- ---------- ------cuua uaguugcaaa
Xyle.fast.-1.   CcGCUu---- --uCCUCGua aa-----ucc AGCaGCaaa- ---------- ------cuua uaguugccaa
Xyle.fast.-2.   CcGCUu---- --uCCUCGua aa-----ucc AGCaGCaca- ---------- ------cuua uaguugccaa
Xyle.fast.-3.   CcGCUu---- --uCCUCGua aa-----ucc AGCaGCaca- ---------- ------cuua uaguugccaa
Xant.camp.      CaGCUu---- --uCCUCGuu aa-----ucc AGCaGCaaa- ---------- ------cuuu uaguugccaa
Xant.axon.      CaGCUu---- --uCCUCGuu aa-----ucc AGCaGCaaa- ---------- ------cuuu uaguugccaa
Legi.pneu.      GAGaUc---- ---UCUCGua aau-----aa GaCUCaauua aa-------- --------ua uaaaugcaaa
Coxi.burn.      CAACgaa--- --gGCUCGua aau--ccauc aGUUGCaaac a--------- --------ga uaguugcaaa
Meth.caps.      CAGAUGa--- ---CCUCGua aau-----cC AUCUGCaaac ca-------- --------aa uaaacgccaa
Uncu.u01a.      UCAUGu---- ---CCUCGua aaa-----cc UGUGACaacc aa-------- --------gc uaguugcgaa
Uncu.u01b.      UCAUGu---- ---CCUCGua aa-----ucc CGUGGCaacc aa-------- --------gc uaguugcgaa
Acin.ADP1.      CAuuUU---- --cUCUCGua aa----uaaA AuuUGCauuu uaaua----- ---------- --gucgcaaa
Micr.degr.      UAGCca---- --aUCACGua aau---ccaa aGCUGCaaa- ---------- ------uuau caguugccaa
Pseu.aeru.      UAGCAG---- --aaCUCGua aau---ucgC UGCUGCaaa- ---------- ------cuua uaguugccaa
Azot.vine.      UGGCAG---- --aACUCGua aau---ccaC UGCUACaaa- ---------- ------cuca uaguugccaa
Pseu.puti.      UAACAG---- --aACUCGua aau---ccaC UGUUGCaac- ---------- -----uuuua uaguugccaa
Pseu.fluo.-1.   UAACAG---- --aAGUCGua aau---ccaC UGUUGCaac- ---------- ----uacuua uaguugccaa
Pseu.fluo.-2.   UAACAG---- --aACUCGua aau---ccaC UGUUGCaac- ---------- ----uucuua uaguugccaa
Pseu.syri.-1.   UAACAG---- --aACUCGua aau---ccaC UGUUGCaac- ---------- ----uuucua uaguugccaa
Pseu.syri.-2.   UAACAG---- --aACUCGua aau---ccaC UGUUGCaac- ---------- ----uuucua uaguugccaa
Mari.hydr.      CAGCga---- --aUCUCGua aau---ccaa aGCUGCaac- ---------- ------guaa uagucgcaaa
Pseu.halo.      CGGUUU---- --gCCUCGua aa------aA AGCCGCaauu u--------- ------aaag uaaucgcaaa
Uncu.ww11.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaca- ---------- ------guua uaguugcaaa
Shew.putr.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaaa- ---------- ------guua uaguugcaaa
Colw.spec.      CGGUUU---- --gCCUGGua aa-------A AGCCGCaa-- ---------- -----aacua uaauugcuaa
Phot.phos.      CGGUUu---- --gCCUCGuu aa------ac AGCCGCaaa- ---------- ------aaaa uagucgcaaa
Vibr.chol.      CGGUag---- --gCCUCGuu aa------ca aACCGCaaa- ---------- ------aaaa uagucgcaaa
Aero.salm.      CGGUag---- --gCCUCGuu aa------ca aACCGCaaa- ---------- ------aaaa uagucgcaaa
Uncu.vlw3.      CGGUag---- --gCCUCGuu aa------ca aACCGCaaa- ---------- ------aaaa uagucgcaaa
Uncu.vlw4.      CGGUag---- --gCCUCGuu aa------ca aACCGCaaa- ---------- ------aaaa uagucgcaaa
Uncu.vls1.-3.   CGGUag---- --gCCUCGuu aa------ca aACCGCaaa- ---------- ------aaaa uagucgcaaa
Uncu.rca3.      CGGUag---- --gCCUCGuu aa------ca aACCGCaaa- ---------- ------aaaa uagucgcaaa
Uncu.vls1.-4.   CGGUag---- --gCCUCGuu aa------ca aACCGCaaa- ---------- ------aaaa uagucgcaaa
Uncu.ww-9.      CGGUag---- --gCCUCGuu aa------ca aACCGCaaa- ---------- ------aaaa uagucgcaaa
Uncu.ww10.      CGGUag---- --gCCUCGuu aa------ca aACCGCaaa- ---------- ------aaag uagucgcaaa
Uncu.vlw5.      CGGUag---- --gCCUCGuu aa------ca aACCGCaaa- ---------- ------aaaa uagucgcaaa
Uncu.vlw6.      CGGUag---- --gCCUCGuu aa------ca aACCGCaaa- ---------- ------aaaa uagucgcaaa
Uncu.rca4.      CGGUag---- --gCCUCGuu aa------ua aACCGCaa-- ---------- ------aaaa uagucgcaaa
Uncu.rca7.      CGGUag---- --gCCUCGuu aa------ua aACCGcaa-- ---------- ------aaga uagccgcaaa
Uncu.rca8.      CGGUag---- --gCCUCGuu aa------ua aACCGCaa-- ---------- ------aaaa uagucgcaaa
Uncu.lem1.      CGGUag---- --gCCUCGuu aa------ua aACCGCaa-- ---------- ------aaaa uagucgcaaa
Uncu.lem2.      CGGUag---- --gCUUCGuu aa------ua aACCGCaa-- ---------- -------aag auagucgcaa
Past.mult.      CGGUag---- --gCCUCGua aa------ua aACCGCaaa- ---------- ------aaaa uagucgcaaa
Mann.haem.      CGGUag---- --gCCUCGua aa------ca aACCGCaaa- ---------- ------auaa uagucgcaaa
Haem.somn.      CGGUag---- --gCCUCGua aa------ua aACCGCaaa- ---------- ------acaa uagucgcaaa
Haem.infl.      CGGUag---- --gCCUCGua aa------ua aACCGCaaa- ---------- ------aaaa uagucgcaaa
Haem.ducr.      CGGUag---- --gCCUCGua aa------ca aACCGCaaa- ---------- ------aaaa uagucgcaaa
Acti.pleu.      CGGUag---- --gCCUCGua aa------ca aACCGCaaa- ---------- ------aaaa uagucgcaaa
Acti.acti.      CGGUag---- --gCCUCGua aa------ua aACCGCaaa- ---------- ------aaaa uagucgcaaa
Buch.aphi.      CGGUUU---- --gCCUCGau aa------aA AACCGUaaa- ---------- ------aaaa uagcugcaaa
Buch.APS-.      CGGUUU---- --gCCUCGau aa-------A AGCCGUaaa- ---------- ------aaaa uaauugcaaa
Esch.coli.-1.   CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- ------aaaa uagucgcaaa
Esch.coli.-2.   CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- ------aaaa uagucgcaaa
Esch.coli.-3.   CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- ------aaaa uagucgcaaa
Prov.rett.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaaa- ---------- ------aaaa uagucgcaaa
Salm.typh.-1.   CGGUUg---- --gCCUCGua aa-------a AGCCGCaaa- ---------- ------aaaa uagucgcaaa
Salm.typh.-2.   CGGUUg---- --gCCUCGua aa-------a AGCCGCaaa- ---------- ------aaaa uagucgcaaa
Salm.ente.-1.   CGGUUg---- --gCCUCGua aa-------a AGCCGCaaa- ---------- ------aaaa uagucgcaaa
Salm.ente.-2.   CuGgUUg--- --gCCUCGua aa-------A AgCcGCaaa- ---------- ------aaaa uagucgcaaa
Shig.flex.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaaa- ---------- -------aaa uagucgcaaa
Shig.dyse.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaaa- ---------- -------aaa uagucgcaaa
Salm.para.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaaa- ---------- ------aaaa uagucgcaaa
Erwi.caro.      CGGUUU---- --gCCUCGua aa-------A AGCCGCaa-- ---------- -----aaaaa uagucgcaaa
Erwi.chry.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- -----aaaaa uagucgcaaa
Kleb.pneu.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- ------aaaa uagucgcaaa
Uncu.rca1.      CGGUag---- --gCCUCGuu aa------ca aACCGCaa-- ---------- ------aaaa uagucgcaaa
Uncu.vls1.-1.   CGGUUU---- --gCCUCGua aa-------A AGCCGCaa-- ---------- ------aaaa uaguugcaaa
Uncu.vls3.      CGGUUU---- --gCCUCGua aa-------A AGCCGCaa-- ---------- -----aaaaa uaguugcaaa
Uncu.vls4.      CGGUUU---- --gCCUCGua aa-------A AGCCGCaa-- ---------- -----aaaaa uaguugcaaa
Uncu.ww-1.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- -----aaaaa uagucgcaaa
Uncu.rca2.      CGGaUg---- --gCCUCGua aa-------a AgCCGCaa-- ---------- -----aaaaa uagucucaaa
Uncu.ww-2.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- -----aaaaa uagucgcaaa
Uncu.ww-3.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- -----aaaaa uagucgcaaa
Uncu.ql-1.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- ------aaaa uagucgcaaa
Uncu.ww-4.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- -----aaaaa uagucgcaaa
Uncu.vls1.-2.pa.---------- ---------- ---------- ---------- ---------- ---------- ----------
Uncu.vls5.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- -----aaaaa uagucgcaaa
Uncu.fs-1.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- ------aaaa auagucgcaa
Uncu.vls6.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- -----aaaaa uagucgcaaa
Uncu.fs-2.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- -----aaaaa uagucgcaaa
Uncu.ww-5.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- -----aaaaa uagucgcaaa
Uncu.ww-6.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- -----aaaaa uagucgcaaa
Uncu.vlw1.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- -----aaaaa uagucgcaaa
Uncu.vls7.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- -----aaaaa uagucgcaaa
Uncu.vls8.      CGGUUg---- --gCCgCGua aa-------a AGCCGCaa-- ---------- ------uaaa uagucgcaaa
Uncu.vls9.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- -----aaaaa uagucgcaaa
Uncu.vlw2.      CGGUUU---- --gCCUCGua aa-------A AGCCGCaa-- ---------- -----aaaaa uagucgcaaa
Uncu.ww-7.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- -----aaaaa uagucgcaaa
Uncu.ww-8.      CGGUUg---- --gCCUCGua aa-------a AGCCGCaa-- ---------- --aaaaaaua uagucgcaaa
Yers.ente.      GCGGag---- --gCCUCGua aa------aa aCCGCAa--- ---------- ----aaaaaa uaauugcaaa
Yers.pest.      GCGGUg---- --gCCUCGua aa------aa ACCGCAaaa- ---------- ------aaaa uaguugcaaa
Desu.vulg.      GCCGCUg--- --gCCUCGua aaa------A GCGGCaca-- ---------- ------aaag uaauugccaa
Desu.desu.      GCCGCUg--- --gCCUCGua aaa------A GCGGCaca-- ---------- ------aaag uaauugccaa
Geob.sulf.      CGGGCUg--- --gCCUCGuu aaaa-----A GCCCGGggc- ---------- ------gaau uacacgccga
Geob.meta.      CGGGCUg--- --gCCUCGuu aaaa-----A GCCCGGggc- ---------- ------gaau uacacgccga
Heli.pylo.      ---GCU---- ---GCUUGua aaac-----A GCaaca---- ---------- ------aaaa uaacuguaaa
Camp.jeju.      -UGGGC---- --aAAGCGua aaaa-----G CCCAaaua-- ---------- ------aaau uaaacgcaaa
Fuso.nucl.-1.   UU-GUC---- ---G-CUGug aga------G ACuAAacaca u--------- ------cuuu uagauggaaa
Fuso.nucl.-2.   UU-GUC---- ---G-CUGug aaa------G ACuAAacaca u--------- ------cguu uagauggaaa
Fuso.nucl.-3.   UU-GUC---- ---G-CUGug aaa------G ACuAAacaca u--------- ------cguu uagauggaaa
Stre.coel.      GGCCaug--- --aUCUCGua aacc----ac aGGCCGaa-- ---------- ------aaaa uaaucgccaa
Ther.fusc.      GGaCGCa--- --gCCUCGuu aaaa---auG CGaCCGcg-- ---------- ----aaaaaa uaagugccaa
Trop.whip.      CGAGGuu--- --gUCUCGuu aacg----au CCUCGCaaaa ---------- --------ua uaagugccaa
Myco.lepr.      CAAgaGa--- --cCACCGua agcg-----U cgUUGCagc- ---------- ------aaua uaagcgccga
Myco.aviu.      CAAgaGa--- --cCACCGua agcg-----U cgUUGCgac- ---------- ------caaa uaagcgccga
Myco.tube.      CAAgaGa--- --cCACCGua agcg-----U cgUUGCgac- ---------- ------caaa uaagcgccga
Myco.bovi.      CAAgaGa--- --cCACCGua agcg-----U cgUUGCgac- ---------- ------caaa uaagcgccga
Myco.mari.      CAagaGa--- --cCACCGua agcg-----U cgaUGCaac- ---------- ------uaga uaagcgccga
Myco.smeg.      CAAgaGa--- --cCACCGua agcg-----U cgUUGCaac- ---------- ------caau uaagcgccga
Cory.diph.      CUAgaGa--- --cCACCGau uuuaagcg-U cgUAGCaaa- ---------- ------uaua uaagcgcaga
Cory.glut.      CUGgaGa--- --cCACCGua agcg-----U cgCAGCaaa- ---------- ------ccaa uaagcgccga
Desu.hafn.      UAGCUu---- --uCCUCGua aaac------ AGCUGCaaa- ---------- ------acuc uaguugccaa
Deha.ethe.      CCAUCc---- --aCCUCAuu aaac-----a GGUGGCaaa- ---------- ------aaac aacuggcgaa
Heli.mobi.      CCgUaaaa-- --agggcG-- ---------- gAaGGc---- ---------- --------uu uaauugccga
Baci.halo.      GGCG------ --aaCUCGuu aaaa------ -CGCCAucgc ---------- -------caa uaacuggcaa
Baci.stea.      GACG------ --uCCUCGua aaaa------ -CGUCaccua a--------- -------aga uaacuggcaa
Baci.mega.      GAUG------ --gCCUCGuu aaaa------ -CAUCaacgc ca-------- ------auaa uaacuggcaa
Baci.subt.      gGCGa----- ---UCUCGua aaca------ -CGCacuua- ---------- ------aaua uaacuggcaa
Stap.sapr.      UUGU------ ---CUUCGuc accaacacac -ACAGUu--- ---------- ------auaa uaacuggcaa
Stap.epid.      UUGG------ ---CUCCGuc aucaacacau uUCGGUu--- ---------- -----aaaua uaacugacaa
Stap.aure.-1.   UUGU------ ---CUUCGuc aucaacacac -ACAGUuu-- ---------- ------auaa uaacuggcaa
Stap.aure.-2.   UUGU------ ---CUUCGuc aucaacacac -ACAGUuu-- ---------- ------auaa uaacuggcaa
Stap.aure.-3.   UUGU------ ---CUUCGuc aucaacacac -ACAGUuu-- ---------- ------auaa uaacuggcaa
Stap.aure.-4.   UUGg------ ---CUUCGuc aucaacacac -aCAGUuu-- ---------- ------auaa uaacuggcaa
Stap.aure.-5.   UUGU------ ---CUUCGuc aucaacacac -ACAGUuu-- ---------- ------auaa uaacuggcaa
Stap.xylo.      UUGU------ ---CUUCGuc accaacacac -ACAGUu--- ---------- ------auaa uaacuggcaa
Baci.anth.      GauCGg---- ---CCUCGuu ------aaaa CG--UCaaag c--------- -------cua uaauuggcaa
List.inno.      GauCGU---- ---CCUCGuu -----aucaA CG--UCaaag cca------- ------auaa uaacuggcaa
List.mono.      GauCGU---- ---CCUCGuu -----aucaA CG--UCaaag cca------- ------auaa uaacuggcaa
List.gray.-1.   GauCGU---- ---CCUCGuu -----aucaA CG--UCaaag ccaa------ -------uaa uaacuggcaa
List.gray.-2.   GauCGg---- ----CCCGuc -----aucaa CG--UCaaag ccaa------ -------uaa uaacuggcaa
List.ivan.      GauCGU---- ---CCUCGuu -----auuaA CG--UCaaag ccaa------ -------uaa uaacuggcaa
List.seel.      GauCGU---- ---CCUCGuu -----aucaA CG--UCaaag ccaa------ -------uaa uaacuggcaa
List.wels.      GauCGU---- ---CCUCGuu -----aucaA CG--UCaaag ccaa------ -------uaa uaacuggcaa
Leuc.mese.      -UCCG----- ----GGCGca aa-------a CGGG-cagaa a--------- -------uuu uaacugcaaa
Leuc.pseu.      -UCCG----- ----GGCGuu aa-------a CGGG-cagac a--------- -------uuu uaacugcaaa
Leuc.lact.      -UCCG----- ----GGCGuu aaa------a CGGG-cagaa a--------- -------uuu uaacugcaaa
Lact.delb.      UuACGU---- ---CUACGuu aaa------A CGUuACaguu a--------- ------aaua uaacugcuaa
Lact.gass.      UcACGU---- ---CUACGuu aaa------A CGUcACaguu a--------- -----aauua uaacugcaaa
Lact.sake.      UuACGU---- ---CUGCGuu aaca-----A CGUuACaguu a--------- ------auua uaacugcaaa
Lact.helv.      UuACGU---- ---CUACGua aaa------A CGUuACaguu a--------- ------aaua uaacugcaaa
Lact.gall.      UuACGU---- ---CUACGua aaa------A CGUuACaguu a--------- ------aaua uaacugcaaa
Lact.plan.-1.   uuGCGU---- ---cUACGua aaa------A CGCu-Caguu ua-------- -----aauua uaacugcaaa
Carn.pisc.pa.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Ente.faec.-1.   UuACGg---- ---CUACGuu aaa------a CGUuACaguu a--------- ------aaua uaacugcuaa
Ente.faec.-2.   UuACGU---- ---CUACGua aaa------A CGUuACaguu a--------- ------aaua uaacugcuaa
Ente.dura.      UuACGU---- ---CUACGuu aaa------A CGUuACaguu a--------- ------aaua uaacugcuaa
Oeno.oeni.      -uuug----- ---uCGGGuu aa-------- -agacugcag au-------- ---------a uaacugcaaa
Lact.lact.-1.   gGGAU----- ----CAGgau aauc------ AUCCgcagau a--------- ------aaua uaacugcuaa
Lact.lact.-2.   gGGAU----- ----CAGgau aauc------ AUCCgcagau a--------- ------aaua uaacugcuaa
Lact.lact.-3.   gGGAU----- ----CAGgau aauc------ AUCCgcagau a--------- ------aaua uaacugcuaa
Lact.lact.-4.   gGGAU----- ----CAGgau aauc------ AUCCgcagau a--------- ------aaua uaacugcuaa
Lact.garv.      UGAUG----- ---uCACCua aauc------ CAUCGCagau a--------- ------aaua uaacugcuaa
Lact.plan.-2.   aGACG----- ---uCACUcu aaac------ CGUCgcagau a--------- ------aaua uaacugcuaa
Pedi.pent.      uuACGg---- ---CUACGua aa------aa CGUucaguuu a--------- -------uua uaacugcaaa
Lact.raff.      CGGCG----- ---cCACUcu aaac------ CGCCGcagau a--------- ------aaua uaacugcuaa
Stre.equi.      -GGCA----- ----GAUGua aaaa------ UGCCa-guua a--------- -------aua uaacugcaaa
Stre.uber.      -GGCA----- ----GAUGua aaaa------ UGCCa-guua a--------- -------aua uaacugcaaa
Stre.pyog.      -GGCA----- ----GAUGua aau------- UGCCa-guua a--------- -------aua uaacugcaaa
Stre.suis.pa.   -GGCA----- ----GAUGua aaaa------ UGCCa-guua a--------- -------aua uaacugcaaa
Stre.ther.      -GGCG----- -----ACGuu aa-------- CGCUcAguua a--------- -------aua uaacugcaaa
Stre.gord.      -aGCG----- ----GAUGua aaa------- CGC-cAguua a--------- -------aua uaacugcaaa
Stre.miti.      -GGCG----- -----ACGua aa-------- CGCUcAguua a--------- -------aua uaacugcaaa
Stre.pneu.      -GGCG----- -----ACGua aa-------- CGCUcAguua a--------- -------aua uaacugcaaa
Stre.muta.      -aGCG----- ----GAUGua aaa------- CGC-cAguua a--------- -------aua uaacugcaaa
Myco.capr.      AGACUaua-- --aAUACUac --------ua GGUUUA---- ---------- ---------a aaaacgcaaa
Urea.urea.      cccCUUau-- --cGCUUUc- --------gA GGcauUu--- ---------- ---------- uaaaugcaga
Spir.kunk.      AGACUaua-- ---AuGCUac --------ua GGUUUG---- ---------- --------aa gaaacgcaag
Myco.geni.      auGCCc---- ----CCUUac a---gcgcua GGUucAa--- ---------- ---------- uaaccgacaa
Myco.pneu.      AUGCC----- ----CCUUac a---gcucua GGUAUAa--- ---------- ---------- uaaccgacaa
Myco.pulm.      GC-------- ---AGACUau aaugcuacua ggcGUUuc-- ---------- -------aau aaacggaaca
Clos.ther.      UCUCGUug-- --gCCUCUuu aaaaa----A CGAGAAac-- ---------- -----uaaaa uaaacgcuaa
Ther.teng.      UCCACC---- --aGCUCGua aaaaa----G GUGGAaaa-- ---------- -------aaa uaaacgcaga
Clos.perf.      CAUGgU---- --gCCUCGau aauaa----A gUAUGCa--- ---------- ---uuaaaga uaaacgcaga
Clos.botu.      CCuGUa---- --cCUgCGuu aaaaa----- ACuGGGa--- ---------- -acuuaaaua uaauugcaaa
Clos.diff.      UCUGGg---- ---uCACGua aaaa------ CUGGGGa--- ---------- -acuuuaaaa uaaacgcaga
Clos.acet.-1.pa.---------- ---------- ---------- ---------- ---------- ---------- ----------
Clos.acet.-2.   UGUGGa---- --cCCgCGuu aaaaaa---- CUAUAG---- ---------- ---------- -----gccuu
Rumi.albu.      gcCGca---- ---CUcUCuu aaaa------ -CG------- ---------- ---------- -----gcgua
Carb.hydr.      CCAUCuua-- ---CCUCGuu aaaaa----u GGUGGG---- ---------- ----aaaaga uaacugccaa
support         SSSSS----- ---SSSSS-- ---------- SSSSSS---- ---------- ---------- ----------

                ....|....| ....|....| ....|....| ....|....| ....|....| ....|....| ....|....|
                   145        155        165        175        185        195        205    
p-pre           ---------- ---------- ---------- ---------- ---------- ---------- ----iiiiii
psknts          ---------- ---------- ---------- ---------- ---------- ---------- ----------
hel-10          ---------- ---------- ---------- ---------- ---------- ---------- ----------
hel-1           ---------- ---------- ---------- ---------- ---------- ---------- ----555555
hel-x           ---------- ---------- ---------- ---------- ---------- ---------- ----aaaaaa
Aqui.aeol.      cgaagcugaa cuc------- ---------- ---------- ---------- ---------- -------gcu
Ther.mari.      cgaaccuguu ---------- ---------- ---------- ---------- ---------- -------gcu
Chlo.aura.-1.   caccaacacu cgggcccagg cucgccug-- ---------- ---------- ---------- -------gcc
Chlo.aura.-2.pa.---------- ----cccaug aucgccug-- ---------- ---------- ---------- -------gcc
Ther.ther.      caccaacuac ---------- ---------- ---------- ---------- ---------- -------gcu
Dein.radi.      ccagaacuac ---------- ---------- ---------- ---------- ---------- -------gcU
Porp.ging.      aaauaa---- ---------- ---------- ---------- ---------- ---------- ---cuacGcU
Bact.frag.      aacuaauua- ---------- ---------- ---------- ---------- ---------- ------cGcU
Bact.fors.      aaauaacua- ---------- ---------- ---------- ---------- ---------- ------CGcU
Tann.fors.      aaauaacua- ---------- ---------- ---------- ---------- ---------- ------CGcU
Prev.inte.      aaacaauua- ---------- ---------- ---------- ---------- ---------- ------cGcU
Cyto.hutc.      agaaucuua- ---------- ---------- ---------- ---------- ---------- ------cGcc
Chlo.tepi.      cgauuauucg uau------- ---------- ---------- ---------- ---------- -------GcA
Chla.psit.      accuaaggcu gaaugcgaaa uuauca---- ---------- ----guuucu cugaccucac cgaggAaAgA
Chla.pneu.      accuaaggcu gaaugcgaaa uuauua---- ---------- ----gcuugu uugacucagu agaggAaagA
Chla.abor.      accuaaggcu aaaugcgaaa uuauca---- ---------- ----guuucu cugaacucuc ugagcAAAgA
Chla.trac.      accuaaggcu gaaugcgaaa uuauca---- ---------- ----gcuucg cugaucucga agaucuaagA
Chla.muri.      accuaaggcu gaaugcgaaa uuauca---- ---------- ----gcuucg cugaucuuaa ugaucuaagA
Osci.spec.      caacaucguu ccuuuc---- ---------- ---------- ---------- --gcucguaa agcgGcuCCU
Anab.spec.      uaacaucguu aaauuu---- ---------- ---------- ---------- --gcucguaa ggacgCUcuA
Chro.spec.      caacaucgua aaauuc---- ---------- ---------- ---------- --------ga gcgucaAGCA
Nost.punc.      uaacaucguu aacuuu---- ---------- ---------- ---------- --gcucguaa ggauGCUCuA
Frem.dipl.      caauaucgua aaauuu---- ---------- ---------- ---------- --gcucguaa ggaaGCcCua
Plec.bory.      caacaucgua ccuuuc---- ---------- ---------- ---------- --gcucguaa aacuGCaCcu
Tric.eryt.      caacauugua ccuuuu---- ---------- ---------- ---------- --gcucguaa gcaaGUagcu
Syne.spec.-1.   uaacaucguc agcuuc---- ---------- ---------- ---------- --------aa acggGUaGcC
Syne.spec.-2.   caacaucguu ccuuuc---- ---------- ---------- ---------- --gcucguaa ggcugcuCcU
Syne.spec.-3.   caacaucguu cguuuc---- ---------- ---------- ---------- --ucccguca agccgcCCcC
Syne.spec.-4.   caacaucguu cguuuc---- ---------- ---------- ---------- --ucccguca cgcagcCccU
Proc.mari.-2.   caacaucguu cguuuc---- ---------- ---------- ---------- --ucccguca gccugcCCUC
Proc.mari.-1.   caaaaucguu aguuuc---- ---------- ---------- ---------- --ucccguca aacagcacca
Syne.spec.-5.   caacaucguu cguuuc---- ---------- ---------- ---------- --ucccguca agccgcCCcC
Syne.spec.-6.   caacaucguu cguuuc---- ---------- ---------- ---------- --ucccguca agccgcCCcU
Cyan.para.cy.   uaauauugua cgu------- ---------- ---------- ---------- --uuuaaccg uaaagcAGcU
Porp.purp.cl.   aaauaauauu auu------- ---------- ---------- ---------- -gcuuuuucu cgaaaAuuAG
Odon.sine.cl.   uaauuuaauu ucuu------ ---cuguguu uaaaaguuua ucaacuaagc aaaauaguuu aaauuuaagu
Pavl.luth.cl.pa.caauauuuua ucuuuu--aa ucgaguagcu guagccccgu auaguuauau agcauuaacu ccuuAUGGUC
Boli.spec.pl.   uaacauuuua gcuuuu---- ---------- ---------- ---------- -----aaccg uaaaUcUuuA
Guil.thet.cl.   caauauaguu ucauuua--- ---------- ---------- ---------- ---guucaaa acguUUAGUc
Thal.weis.cl.   uaauauaaua ccguuua--- ------uuuu uaaagcagua aaaacaaaaa aagaagcaau ggcuuuAAAU
Meso.viri.cl.   caauauuuua ccuuuua--- ---------- ---------- ---------- ------aucg uaagacaGcc
Recl.amer.mt.   uaaaaaaaa- ---------- ---------- ---------- ---------- ---------- ----------
Fibb.succ.      cgaaaac--- ---------- ---------- ---------- ---------- ---------- ----uacgca
Trep.dent.      aaauaacgac aguu------ ---------- ---------- ---------- ---------u cgauuacgcc
Trep.pall.      uucugacagu uuc------- ---------- ---------- ---------- ---------- -gacuacgcg
Borr.burg.      aaauaauaac uuu------- ---------- ---------- ---------- --acaagcuc aaaucuugua
Rhod.palu.      cgacaacuau ---------- ---------- ---------- ---------- --------gc uccgGUUgcU
Magn.magn.-1.   cgacaacuuu ---------- ---------- ---------- ---------- --------gc uccgGUggcU
Magn.magn.-2.   cgacaac--- ---------- ---------- ---------- ---------- --------gu ugaacuugcc
Rhod.rubr.      cgacaacguu ---------- ---------- ---------- ---------- ---------- -gaacuugcc
Meth.exto.pa.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Brad.japo.      cgacaacuuu gcu------- ---------- ---------- ---------- ---------- -ccggUUgcU
Meso.loti.      cgacaacuau gcg------- ---------- ---------- ---------- ---------- -gaaGCacGU
Bruc.meli.      ugacaacaau gcu------- ---------- ---------- ---------- --------ca ggguUaUgcU
Sino.meli.      cgacaacuau gcu------- ---------- ---------- ---------- ---------- -gaaGcaCGU
Rhiz.legu.      cgacaacuau gcg------- ---------- ---------- ---------- ---------- -gaagcucGU
Agro.tume.      ugacaacaac gcu------- ---------- ---------- ---------- --------aa ggaaUaCgcU
Caul.cres.      cgauaacuuc gcu------- ---------- ---------- ---------- --------ga agagUUCGCC
Sili.pome.      cgacaaucgu gcu------- ---------- ---------- ---------- ---------- -ccgguUGcU
Rhod.spha.      cgacaaccgu gcu------- ---------- ---------- ---------- ---------- -ccgGUGGCU
Rick.prow.      cgauaaucgu uau------- ---------- ---------- ---------- -----guagg uguuccagcu
Rick.typh.      cgauaauaag cgu------- ---------- ---------- ---------- --uauguagg uguugccgcu
Rick.cono.      cgauaauaau cguucu---- ---------- ---------- ---------- -----guagg ucauuuagcu
Sphi.arom.      cgacaacgaa gcacuu---- ---------- ---------- ---------- ---------- -------GCU
Ehrl.chaf.      cgauaauuuc guuuuu---- ---------- ---------- gcuaaugaua auaauagcag ugcuaacuUA
Wolb.spec.      cgauaauuuu gcugcu---- ---------- ---------- ---------- --gaagacaa ugucgacgca
Chro.viol.      cgacgaaacu uac------- ---------- ---------- ---------- ---------- -------gcU
Neis.gono.      cgacgaaacu uac------- ---------- ---------- ---------- ---------- -------Gcu
Neis.meni.-1.   cgacgaaacu uac------- ---------- ---------- ---------- ---------- -------Gcu
Neis.meni.-2.   cgacgaaacu uac------- ---------- ---------- ---------- ---------- -------Gcu
Uncu.u02-.      cgacgaacag uuu------- ---------- ---------- ---------- ---------- -------gcU
Nitr.euro.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------gcU
Meth.glyc.      cgacgaaacu uac------- ---------- ---------- ---------- ---------- -------gcU
Nitr.cryo.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------Gcu
Uncu.u04-.pa.   cgacgaaacu uac------- ---------- ---------- ---------- ---------- -------gcU
Alca.faec.      cgacgagcgu uuc------- ---------- ---------- ---------- ---------- -------GcU
Bord.para.      cgacgagcgu uuc------- ---------- ---------- ---------- ---------- -------Gcu
Bord.pert.      cgacgagcgu cuc------- ---------- ---------- ---------- ---------- -------Gcu
Bord.bron.am.   cgacgagcgu yuc------- ---------- ---------- ---------- ---------- -------Gcu
Coma.test.      cgacgaacgu uuc------- ---------- ---------- ---------- ---------- -------gca
Hydr.pall.      cgacgaacgu uuc------- ---------- ---------- ---------- ---------- -------gca
Vari.para.      cgacgaacgu uuc------- ---------- ---------- ---------- ---------- -------gca
Burk.pseu.      cgacgauacg uuc------- ---------- ---------- ---------- ---------- -------gca
Burk.mall.      cgacgauacg uuc------- ---------- ---------- ---------- ---------- -------gca
Burk.cepa.      cgacgauacg uuc------- ---------- ---------- ---------- ---------- -------gca
Burk.fung.      cgacgauacg uuc------- ---------- ---------- ---------- ---------- -------gca
Alca.eutr.      cgacgaacgu uac------- ---------- ---------- ---------- ---------- ----------
Rals.eutr.      cgacgaacgu uac------- ---------- ---------- ---------- ---------- -------gca
Rals.meta.      cgacgaacgu uac------- ---------- ---------- ---------- ---------- -------gca
Rals.sola.      cgacaaccgu uac------- ---------- ---------- ---------- ---------- -------cag
Rals.pick.      cgacgaacgu uac------- ---------- ---------- ---------- ---------- -------gca
Acid.ferr.-1.   cgacagcaau uac------- ---------- ---------- ---------- ---------- -------gcu
Acid.ferr.-2.   cgacagcaau uac------- ---------- ---------- ---------- ---------- -------gcc
Fran.tula.      caaaaaagca aaccgcguag cggcuaacga cagcaac--- ---------- -----uuugc ugcuguugcU
Dich.nodo.      cgacgacaac uac------- ---------- ---------- ---------- ---------- -------gcu
Xyle.fast.-1.   cgaagacaac uuc------- ---------- ---------- ---------- ---------- -------gcu
Xyle.fast.-2.   cgaagacaac uuc------- ---------- ---------- ---------- ---------- -------gcu
Xyle.fast.-3.   cgaagacaac uuc------- ---------- ---------- ---------- ---------- -------gcu
Xant.camp.      cgacgacaac uac------- ---------- ---------- ---------- -----gguuc ggacuucGCU
Xant.axon.      cgaugacaac uac------- ---------- ---------- ---------- -----gguuc ggacuucGCU
Legi.pneu.      cgaugaaaac uuu------- ---------- ---------- ---------- -----gcugg uggggaagCU
Coxi.burn.      cgauaguaau uau------- ---------- ---------- ---------- --------cu ccaagaagCU
Meth.caps.      cgacgacguu uac------- ---------- ---------- ---------- ---------- -------gCA
Uncu.u01a.      cgacuccaac uac------- ---------- ---------- ---------- ---------- -------GCc
Uncu.u01b.      cgacuccaac uac------- ---------- ---------- ---------- ---------- -------GCc
Acin.ADP1.      cgacgaaacu u--------- ---------- ---------- ---------- ---------- -----ACGcu
Micr.degr.      ugaugacaac uac------- ---------- ---------- ---------- ---------- -ggugcuCAA
Pseu.aeru.      cgacgacaac uac------- ---------- ---------- ---------- ---------- -------gcu
Azot.vine.      cgacgacaac uac------- ---------- ---------- ---------- ---------- -------gcu
Pseu.puti.      ugacgaaaac uac------- ---------- ---------- ---------- -----ggcgc ggaguacAAG
Pseu.fluo.-1.   ugacgaccaa uac------- ---------- ---------- ---------- ---------- -ggugcuGcu
Pseu.fluo.-2.   ugacgaaaac uac------- ---------- ---------- ---------- -----ggcca ggaauucGcu
Pseu.syri.-1.   ugacgaaaac uac------- ---------- ---------- ---------- ---------- -ggugcucAa
Pseu.syri.-2.   ugacgaaacc uac------- ---------- ---------- ---------- --------gg ggaauacGcu
Mari.hydr.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCa
Pseu.halo.      cgacgauaac uac------- ---------- ---------- ---------- ---------- -------ucu
Uncu.ww11.      cgacgauaac uac------- ---------- ---------- ---------- ---------- -------gcu
Shew.putr.      cgacgauaac uac------- ---------- ---------- ---------- ---------- -------gcu
Colw.spec.      cgacgauacg uuc------- ---------- ---------- ---------- ---------- -------gca
Phot.phos.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCa
Vibr.chol.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCa
Aero.salm.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCa
Uncu.vlw3.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCa
Uncu.vlw4.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCa
Uncu.vls1.-3.   cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCa
Uncu.rca3.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCa
Uncu.vls1.-4.   cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCa
Uncu.ww-9.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCa
Uncu.ww10.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCa
Uncu.vlw5.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCa
Uncu.vlw6.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCa
Uncu.rca4.      cgacgaaacc uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.rca7.      cgacgaaacc uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.rca8.      cgacgaaacc uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.lem1.      cgacgaaacc uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.lem2.      cgacgaaacg cac------- ---------- ---------- ---------- ---------- -------GcU
Past.mult.      cgacgaacaa uac------- ---------- ---------- ---------- ---------- -------GCU
Mann.haem.      cgacgaacaa uac------- ---------- ---------- ---------- ---------- -------GCU
Haem.somn.      cgacgaacaa uac------- ---------- ---------- ---------- ---------- -------GCU
Haem.infl.      cgacgaacaa uac------- ---------- ---------- ---------- ---------- -------GCU
Haem.ducr.      cgacgaacaa uac------- ---------- ---------- ---------- ---------- -------GCU
Acti.pleu.      cgacgaacaa uac------- ---------- ---------- ---------- ---------- -------GCU
Acti.acti.      cgacgaacaa uac------- ---------- ---------- ---------- ---------- -------GCU
Buch.aphi.      uaauaaacaa aac------- ---------- ---------- ---------- ---------- ----uacGCU
Buch.APS-.      uaauaaacaa aac------- ---------- ---------- ---------- ---------- ----uacGCU
Esch.coli.-1.   cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Esch.coli.-2.   cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Esch.coli.-3.   cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Prov.rett.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Salm.typh.-1.   cgacgaaacc uac------- ---------- ---------- ---------- ---------- -------GCU
Salm.typh.-2.   cgacgaaacc uac------- ---------- ---------- ---------- ---------- -------GCU
Salm.ente.-1.   cgacgaaacc uac------- ---------- ---------- ---------- ---------- -------GCU
Salm.ente.-2.   cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Shig.flex.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Shig.dyse.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Salm.para.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Erwi.caro.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Erwi.chry.      cgacgaaaac uuc------- ---------- ---------- ---------- --------gc accugcuGcU
Kleb.pneu.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.rca1.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCa
Uncu.vls1.-1.   cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCa
Uncu.vls3.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCa
Uncu.vls4.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCa
Uncu.ww-1.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.rca2.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.ww-2.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.ww-3.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.ql-1.      cgucgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.ww-4.      cgacggaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.vls1.-2.pa.---------- ---------- ---------- ---------- ---------- ---------- ----------
Uncu.vls5.      cgacgaaacc uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.fs-1.      acgcgaaacc uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.vls6.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.fs-2.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.ww-5.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.ww-6.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.vlw1.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.vls7.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.vls8.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.vls9.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Uncu.vlw2.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCa
Uncu.ww-7.      cgacgaaaac ugc------- ---------- ---------- ---------- ---------- -------GCU
Uncu.ww-8.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCU
Yers.ente.      cgacucgcaa uacgaaucug cu-------- ---------- ---------- ---------- -------gcU
Yers.pest.      cgacgaaaac uac------- ---------- ---------- ---------- ---------- -------GCa
Desu.vulg.      ---caauuac gacuac---- ---------- ---------- ---------- ---------- -------gcU
Desu.desu.      caacgauuac gacuac---- ---------- ---------- ---------- ---------- -------gcU
Geob.sulf.      uaauuacgac uac------- ---------- ---------- ---------- ---------- -------gcu
Geob.meta.      uaauuacgac uac------- ---------- ---------- ---------- ---------- -------gcc
Heli.pylo.      caacacagau uac------- ---------- ---------- ---------- -----gcucc agcuuaCgCU
Camp.jeju.      caacguuaaa uuc------- ---------- ---------- ---------- -----gcucc ugcuuacgcU
Fuso.nucl.-1.   caaagauuac ---------- ---------- ---------- ---------- ---------- -------GcU
Fuso.nucl.-2.   caaagaauac ---------- ---------- ---------- ---------- ---------- -------GcU
Fuso.nucl.-3.   caaagaauac ---------- ---------- ---------- ---------- ---------- -------GcU
Stre.coel.      caccaagcgc ga-------- ---------- ---------- -------uuc cucccagcag gccuuCgC-C
Ther.fusc.      cucuaagcgc ---------- ---------- ---------- ---------- -------acu gaguucgcu-
Trop.whip.      cuuaaagcgc ---------- ---------- ---------- ---------- -------acu gaucuaagu-
Myco.lepr.      uucauaucag cgc------- ---------- ---------- ---------- ---------- gacuauGCU-
Myco.aviu.      uucacaucag cgc------- ---------- ---------- ---------- ---------- gacuacGCU-
Myco.tube.      uucacaucag cgc------- ---------- ---------- ---------- ---------- ----------
Myco.bovi.      uucacaucag cgc------- ---------- ---------- ---------- ---------- gacuacGCU-
Myco.mari.      uucacaucag cgc------- ---------- ---------- ---------- ---------- gacuacGCU-
Myco.smeg.      uuccaaucag cgc------- ---------- ---------- ---------- ---------- gacuacGCC-
Cory.diph.      gaacacucag cgc------- ---------- ---------- ---------- ---------- gacuacGCcC
Cory.glut.      gaagucucag cgc------- ---------- ---------- ---------- ---------- gacuacGCcC
Desu.hafn.      cgacgac--- ---------- ---------- ---------- ---------- ---------- aacuacGCuC
Deha.ethe.      cgugaac--- ---------- ---------- ---------- ---------- ---------- -ucgUUcuuG
Heli.mobi.      agauaacuac ---------- ---------- ---------- ---------- ---------- -------gcU
Baci.halo.      agaaaacaac ---------- ---------- ---------- ---------- ---------- -aacuUCGCA
Baci.stea.      acaaaacuac ---------- ---------- ---------- ---------- ---------- -------Gcu
Baci.mega.      aucuaacaau aacu------ ---------- ---------- ---------- ---------- -----ucgcu
Baci.subt.      aacuaacagu uuuaaccaaa acg------- ---------- ---------- ---------- -----uagca
Stap.sapr.      agaaaacaau aauu------ ---------- ---------- ---------- ---------- -----ucgca
Stap.epid.      aucaaacaau aauu------ ---------- ---------- ---------- ---------- -----ucgca
Stap.aure.-1.   aucaaacaau aauu------ ---------- ---------- ---------- ---------- -----ucgca
Stap.aure.-2.   aucaaacaau aauu------ ---------- ---------- ---------- ---------- -----ucgca
Stap.aure.-3.   aucaaacaau aauu------ ---------- ---------- ---------- ---------- -----ucgca
Stap.aure.-4.   aucaaacaau aauu------ ---------- ---------- ---------- ---------- -----ucgca
Stap.aure.-5.   aucaaacaau aauu------ ---------- ---------- ---------- ---------- -----ucgca
Stap.xylo.      agaaaacaau aauu------ ---------- ---------- ---------- ---------- -----ucgca
Baci.anth.      acaaaacaau c--------- ---------- ---------- ---------- ---------- -----uuuCU
List.inno.      agaaaaacaa a--------- ---------- ---------- ---------- ---------- --accuagcU
List.mono.      agaaaaacaa a--------- ---------- ---------- ---------- ---------- --accuagcU
List.gray.-1.   agaaaaacaa a--------- ---------- ---------- ---------- ---------- --accuagcU
List.gray.-2.   acaaaacaac a--------- ---------- ---------- ---------- ---------- --auuuagcU
List.ivan.      agaaaaacaa a--------- ---------- ---------- ---------- ---------- --accuagcU
List.seel.      agaaaaacaa a--------- ---------- ---------- ---------- ---------- --accuagcU
List.wels.      agaaaaacaa a--------- ---------- ---------- ---------- ---------- --accuagcU
Leuc.mese.      aaacgaaaac u--------- ---------- ---------- ---------- ---------- --cuUuCGCu
Leuc.pseu.      aaacgaaaac u--------- ---------- ---------- ---------- ---------- --cuUACGca
Leuc.lact.      aaacgaaaac u--------- ---------- ---------- ---------- ---------- --cuuuCGCa
Lact.delb.      aaacgaaaac a--------- ---------- ---------- ---------- ---------a cucuUACGCu
Lact.gass.      uaacgaaaau u--------- ---------- ---------- ---------- ---------- --cuuACGCa
Lact.sake.      caauaacaau u--------- ---------- ---------- ---------- ---------- --cuuACGCu
Lact.helv.      uaacaaaaau u--------- ---------- ---------- ---------- ---------- --cuuACGCA
Lact.gall.      uaacaaaaau u--------- ---------- ---------- ---------- ---------- --cuuACGCA
Lact.plan.-1.   aaauaauaac aauu------ ---------- ---------- ---------- ---------- --cuUACGcU
Carn.pisc.pa.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Ente.faec.-1.   aaacgaaaac aauu------ ---------- ---------- ---------- ---------- --cuUUCGCU
Ente.faec.-2.   aaacgaaaac aacu------ ---------- ---------- ---------- ---------- --cuUACGCU
Ente.dura.      aaacgaaaac aacu------ ---------- ---------- ---------- ---------- --cuUACGCU
Oeno.oeni.      aaauaaugaa c--------- ---------- ---------- ---------- ---------c aucuUACGCa
Lact.lact.-1.   aaauaauaca caaa------ ---------- ---------- ---------- ---------- --cuuACGCA
Lact.lact.-2.   aaauaauaca caaa------ ---------- ---------- ---------- ---------- --cuuACGCA
Lact.lact.-3.   aaauaauaca caaa------ ---------- ---------- ---------- ---------- --cuuACGCA
Lact.lact.-4.   aaauaauaca caaa------ ---------- ---------- ---------- ---------- --cuuACGCA
Lact.garv.      aaauaacacu u--------- ---------- ---------- ---------- ---------- --cuuACGCA
Lact.plan.-2.   aaauacacaa a--------- ---------- ---------- ---------- ---------- --cuuACGCU
Pedi.pent.      aaauaauaac aau------- ---------- ---------- ---------- ---------- -ucuuACGcU
Lact.raff.      aaauacacaa a--------- ---------- ---------- ---------- ---------- --cuuACGCA
Stre.equi.      aaauaacaca acu------- ---------- ---------- ---------- ---------- ----uACGCU
Stre.uber.      aaauacaaac ucu------- ---------- ---------- ---------- ---------- ----uACGCU
Stre.pyog.      aaauacaaac ucu------- ---------- ---------- ---------- ---------- ----uACGCU
Stre.suis.pa.   aaauacaaac acu------- ---------- ---------- ---------- ---------- ----uACGCA
Stre.ther.      aaauacuaau ucu------- ---------- ---------- ---------- ---------- ----uACGCu
Stre.gord.      aaauaauacu ucu------- ---------- ---------- ---------- ---------- ----uACGCU
Stre.miti.      aaauaacacu ucu------- ---------- ---------- ---------- ---------- ----uACGCU
Stre.pneu.      aaauaacacu ucu------- ---------- ---------- ---------- ---------- ----uACGCU
Stre.muta.      aaauacaaau ucu------- ---------- ---------- ---------- ---------- ----uACGCA
Myco.capr.      uaaaaacgaa gaaacuuuug aaaugccagc auuuaugaug aa---uaaug caucagcugg agcaaacuuU
Urea.urea.      aaauaaaaaa ucuucugaag uagaauuaaa cccagcguuu au---ggcuu cagcuacuaa ugcaaacuac
Spir.kunk.      caaaaaacaa aaagaagaca aaauugaaau gccagcuuuu au---gauga acaaucaauu agcaguAuCa
Myco.geni.      agaaaauaac gaaguguugg uagaaccaaa uuugaucauu ------aacc aacaagcaag uguuaacuuu
Myco.pneu.      aaauaacgac gaaguuuugg uagauccaau guugaucgcu ------aacc aacaagcaag uaucaacuac
Myco.pulm.      aaaaaacaag aaa------- ---------- ---------- ---------- ---------- ----aUgacu
Clos.ther.      cgaagauaau uac------- ---------- ---------- ---------- ---------- ----gcuUUa
Ther.teng.      cagagaacuc ---------- ---------- ---------- ---------- ---------- -----gcUU-
Clos.perf.      agauaauuu- ---------- ---------- ---------- ---------- ---------- ------uGcA
Clos.botu.      cgauaauuu- ---------- ---------- ---------- ---------- ---------- ------UGcA
Clos.diff.      cgauaauuu- ---------- ---------- ---------- ---------- ---------- ------cgcG
Clos.acet.-1.pa.---------- ---------- ---------- ---------- ---------- ---------- ----------
Clos.acet.-2.   aaaaauaaag gau------- ---------- ---------- ---------- --aacgaaaa uaauuuagcu
Rumi.albu.      cguuuuaaaa uuaggc---- ---------- ---------- ---------- --ggccacgg uuauuuugca
Carb.hydr.      cgaaaacuac ---------- ---------- ---------- ---------- ---------- -------Gcu
support         ---------- ---------- ---------- ---------- ---------- ---------- ----------

                ....|....| ....|....| ....|....| ....|....| ....|....| ....|....| ....|....|
                   215        225        235        245        255        265        275    
p-pre           iiijjjj--- ---------- ---------- ---------- ---------- jjjj--iiii iiiii-----
psknts          ---------- --sss----- ---------- ---------- ---------- ---------- ----------
hel-10          ---------- ---------- ---------- ---------- ---------- ---------- ----------
hel-1           5555555--- ---------- ---------- ---------- ---------- 5555--5555 55555-----
hel-x           aaabbbb--- ---------- ---------- ---------- ---------- bbbb--aaaa aaaaa-----
Aqui.aeol.      cuCGCUG--- -ccuaauuaa a--------- ---------- -------cgg CAGC--G--- ----------
Ther.mari.      guuGCCG--- -cuuaauaga uaa------- ---------- ---------g CGGC------ ----------
Chlo.aura.-1.   cuCGCCG--- -cuuaauaau ag-------- ---------- ---------- CGGC--G--- ----------
Chlo.aura.-2.pa.cuCGCCGcuu -cauaauag- ---------- ---------- ---------- UGGC--G--- ----------
Ther.ther.      cUCGCGG--- -cuuaauga- ---------- ---------- ---------- CCGC--GA-- ----------
Dein.radi.      CUCGCUg--- -cuua----- ---------- ---------- ---------- -AGU--GAGA ----------
Porp.ging.      CUcGCUG--- -cguaau--- ---------- ---------- ---cgaagaa UAGU---AGA uUa--gacgc
Bact.frag.      CUuGCUG--- -cuuaau--- ---------- ---------- ---cgaauca UAGU---AGA uUa-----gc
Bact.fors.      CUcGCUG--- -cuuaau--- ---------- ---------- ---cgaagca CAGU---AGA uUG---aagc
Tann.fors.      CUcGCUG--- -cuuaau--- ---------- ---------- ---cgaagca CAGU---AGA uUG---aagc
Prev.inte.      CUcGCUG--- -ccuaau--- ---------- ---------- ---cgaagua CAGU---AGA uUa--cuggc
Cyto.hutc.      AUGGCUg--- -cuuaauua- ---------- ---------- ---cgaacua -AGU-uUGUa aUaaugagcg
Chlo.tepi.      AUgGCUg--- -ccugauua- ---------- ---------- ------gcac aAGU-uaAUU -Cagaagcca
Chla.psit.      uUAGCUg--- -cuuaauua- ---------- ---------- ------gcaa aAGU--UGuU gUcUagauaa
Chla.pneu.      cUAGCUg--- -cuuaauua- ---------- ---------- ------gcaa aAGU--UGuU agcUagauaa
Chla.abor.      uUAGCUg--- -cuuaauua- ---------- ---------- ------gcaa aAGU--UGuU aUUUagauaa
Chla.trac.      GUAGCUg--- -cuuaauua- ---------- ---------- -------gca aAGU--UGUU accuaaau-a
Chla.muri.      GUuGCUg--- -cuuaauua- ---------- ---------- -------gca aAGU--uGUU accuaagu-a
Osci.spec.      guaGCUG--- -ccuaa---- ---------- ---------- ---aaaccuc UAGC-----A GGuuUgagc-
Anab.spec.      GuAGCUG--- -ccuaa---- ---------- ---------- ---------a UAGC-cUcUU ucAG-guucg
Chro.spec.      GuaUUUG--- -cuuaa---- ---------- ---------- ---gcccaac UGAG--gcUU GCUc------
Nost.punc.      GUagcUG--- -ccuaaa--- ---------- ---------- ---caccucu UAua--gGUU cGAGC-----
Frem.dipl.      GUUgcUG--- -ccuaauag- ---------- ---------- -----ccucu UAua--GGUc cGaGC-----
Plec.bory.      GUUgcAG--- -cauaa---- ---------- ---------a acaccucuaa UUca--GGUu cGaGC-----
Tric.eryt.      GCUcuAG--- -cuuaa---- ---------- ------uugc aaaaacaccu CUuauaGGUu cgaGC-----
Syne.spec.-1.   aUaGCAG--- -ccuagucug uaa------- -------aag cuacauuuuc UUGU-caAaG aCcGUuu---
Syne.spec.-2.   GuAGCUG--- -cuuaa---- ---------- -----acgcc acaaacuuuc UGGC--U-CG aGc-------
Syne.spec.-3.   GUggCUG--- -ccugaccuc uu-------- ---------- --aacggaga CGG---gGUG aGG-------
Syne.spec.-4.   GUUgCUG--- -ccugacccu u--------- ---------- --aggggaga UGG---GGUG aaG-------
Proc.mari.-2.   GUggCUG--- -ccugacccu aau------- ---------- --aagggaga UGG---gGUG AGG-------
Proc.mari.-1.   GUUgCUG--- -cuugaucuc ---------- ---------- --aaaggaga UGG---GGUg aua-------
Syne.spec.-5.   GUggCUG--- -ccugacacu cuu------- ---------- --aacggaga CGG---gGUG aGG-------
Syne.spec.-6.   GUggCUG--- -ccugacacu cuu------- ---------- --aacggaga CGG---gGUG aGG-------
Cyan.para.cy.   UUcgCUG--- -uuuaauaau uacu--uuua auuuaaaaac cuaauuuuuu UAG----GAA uUUauuu---
Porp.purp.cl.   -CUGUUG--- -cauaaauag ucu------- -caauuuuug uaauucgaag UGAU--AGaC UcuUauacac
Odon.sine.cl.   UUUGCUG--- -uuuaaguuu uaug------ ------caca uuuaaugauc UAGU--AAAu aacuuug---
Pavl.luth.cl.pa.aaaAAAU--- -c-uagaaa- ---------- ---------- ---------- GUUU-----G AUCGUaaagc
Boli.spec.pl.   AGUUUCG--- -cuuaa---- ---------- ---------- -aauuauuua UGGA-aAUUU uuAaGagug-
Guil.thet.cl.   UcUUUUG--- -cauaa---- ---------- ---------- ---------g CAAA--AuGu GUUAAuaac-
Thal.weis.cl.   uUUGcUG--- -uauag---- ---------- -----uucau uaacuuaggu UAuU-aAAuA UUU-------
Meso.viri.cl.   GUaGcUG--- -uuuaa---- ---------- ---------- --aaguuuuu UGaU--aACu uCg-------
Recl.amer.mt.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fibb.succ.      cUCGcUG--- -ccuaa---- ---------- ---------- ---------u UAaC--GGca a---------
Trep.dent.      uUaGCuG--- -cauaa---- ---------- ---------- ---------- UcGC---G-- ----------
Trep.pall.      cUcGCcG--- -cguaa---- ---------- ---------- ---------- UcGC---G-- ----------
Borr.burg.      augGCUG--- -cuuaa---- ---------- ---------- --------gu UAGC------ ----------
Rhod.palu.      CAGGCUG--- -cguaa---- ---------- ---------- --------cg CAGU--UUGA aaGAC-----
Magn.magn.-1.   GuCGCCG--- -cguaa---- ---------- ---------- ---------g CGGU--GcCA aaaAC-----
Magn.magn.-2.   gcUGCGG--- -cuuag---- ---------- ---------- ---------u CCGU-aA--- ----------
Rhod.rubr.      gcUGCGG--- -ccuaa---- ---------- ---------- ------acac CCGU-aA--- ----------
Meth.exto.pa.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Brad.japo.      CAGGCUG--- -cguaa---- ---------- ---------- --------cg CAGU--UUGA aaGA------
Meso.loti.      CuCGCUG--- -cuuaa---- ---------- ---------- --------ug CAGU--GcGA Ua-GC-----
Bruc.meli.      cUCGCUG--- -ccuaa---- ---------- ---------- ---------- UGGC--GGuG cgG-G-----
Sino.meli.      cUCGCUG--- -ccuaa---- ---------- ---------- ---------- CGGC--GGuG CGa-C-----
Rhiz.legu.      CuCGCUG--- -cuuaa---- ---------- ---------- -------ucg CGGU--GuGA C---------
Agro.tume.      cUCGCUG--- -ccuaa---- ---------- ---------- ---------- UGGC--GGuG cgG-G-----
Caul.cres.      guCGCUG--- -cguaa---- ---------- ---------- --------ug CGGU--GcaG GUGAA-----
Sili.pome.      cUGGCUG--- -cguaa---- ---------- ---------- ---------g CAGU-cCGaA aCA-------
Rhod.spha.      CuGGCUG--- -cguaa---- ---------- ---------- ---------g CAGU--UcGA GUUAU-----
Rick.prow.      uU-AGcUgca gcuuaa---- ---------- ---------- ---------- GcCU---A-- ----------
Rick.typh.      uU-AGcugca gcuuaa---- ---------- ---------- ---------- ucCU---A-- ----------
Rick.cono.      uU-AGcAg-- -cuuaa---- ---------- ---------- ---------- UcCU---A-- ----------
Sphi.arom.      CUcGcGG--- -cguaa---- ---------- ---------- ---------- UUcU--aGGG GC--------
Ehrl.chaf.      GUAGcUG--- -cuuag---- ---------- ---------- -------uuu UA-U--UAUU A---------
Wolb.spec.      aUaGCUg--- -cuuaa---- ---------- ---------- -------uuu aAGC---Ac- ----------
Chro.viol.      CUGGCaG--- -ccuaa---- ---------- ---------- ------cggc CgGC--CAGA ----------
Neis.gono.      UUAGCCg--- -cuuaa---- ---------- ---------- ---------- -GGC--UAG- -C--------
Neis.meni.-1.   UUAGCCg--- -cuuaa---- ---------- ---------- ---------- -GGC--UAG- -C--------
Neis.meni.-2.   UUAGCCg--- -cuuaa---- ---------- ---------- ---------- -GGC--UAG- -C--------
Uncu.u02-.      CUAGCaG--- -cuuaa---- ---------- ---------- ------ucgc UcGC--UAGA ----------
Nitr.euro.      UUAGCCG--- -cuuaa---- ---------- ---------- --------uc CGGC--UAAA ----------
Meth.glyc.      CUAGCCG--- -cuuaa---- ---------- ---------- -------ucc CGGC--UGGA ----------
Nitr.cryo.      UUAGCCG--- -cuuaa---- ---------- ---------- -------ua- CGGC--UAG- -C--------
Uncu.u04-.pa.   CUAGCCG--- -cuuaa---- ---------- ---------- -------ucc CGGC--UGGA ----------
Alca.faec.      CUAGCCg--- -cuuaa---- ---------- ---------- ---------- -GGC--UGGG -C--------
Bord.para.      CUCGCCG--- -cuuaa---- ---------- ---------- ---------g CGGU--GAG- -C--------
Bord.pert.      CUCGCCG--- -cuuaa---- ---------- ---------- ---------g CGGU--GAG- -C--------
Bord.bron.am.   CUCGCCG--- -cuuaa---- ---------- ---------- ---------g CGGU--GAG- -C--------
Coma.test.      CUCGCCG--- -cuuaa---- ---------- ---------- --------uc CGGU--GAG- ----------
Hydr.pall.      CUCGCCG--- -cuuaa---- ---------- ---------- ------acac CGGU--GAG- ----------
Vari.para.      CUCGCUG--- -cuuaa---- ---------- ---------- ------uugc CAGU--GAG- ----------
Burk.pseu.      cUGGCaG--- -ccuaa---- ---------- ---------- -------ggg CcGC--CGu- ----------
Burk.mall.      cUGGCaG--- -ccuaa---- ---------- ---------- -------ggg CcGC--CGu- ----------
Burk.cepa.      cUGGCaG--- -ccuaa---- ---------- ---------- -------ggg CcGC--CGu- ----------
Burk.fung.      cUGGCaG--- -ccuaa---- ---------- ---------- -------ggg CcGC--CGu- ----------
Alca.eutr.      GCacUCG--- -cuuaa---- ---------- ---------- -------uug CGGc--cGU- ----------
Rals.eutr.      cUGGCCG--- -cuuaa---- ---------- ---------- -------uug CGGC--CGu- ----------
Rals.meta.      cUGGCaG--- -ccuaa---- ---------- ---------- -------ggg CcGC--CGu- ----------
Rals.sola.      cUGGCcg--- -cuuaa---- ---------- ---------- ------uugc gcGC--CGu- ----------
Rals.pick.      cUGGCaG--- -ccuaa---- ---------- ---------- -------ggg CcGC--CGu- ----------
Acid.ferr.-1.   CUCGCUG--- -cuuaa---- ---------- ---------- ---------g CAGU--GAG- ----------
Acid.ferr.-2.   CUCGCUG--- -cuuaa---- ---------- ---------- ---------g CAGU--GAG- ----------
Fran.tula.      aAAGCUG--- -ccuag---- ---------- ---------- --------uc UAGC--UUaA ua--------
Dich.nodo.      uuAGCGG--- -cuuaa---- ---------- ---------- -------uuc CCGC--Uuu- ----------
Xyle.fast.-1.   gUAGCCg--- -cuuaa---- ---------- ---------- ---------- -GGC-uUAa- ----------
Xyle.fast.-2.   cUAGCCg--- -cuuaa---- ---------- ---------- ---------- -GGU--UAa- ----------
Xyle.fast.-3.   aUAGCCg--- -cuuaa---- ---------- ---------- ---------- -GGC-uUAa- ----------
Xant.camp.      AucGCCG--- -cuuaa---- ---------- ---------- ---------u UGGC--uuUA GUu-------
Xant.axon.      AucGCCG--- -cuuaa---- ---------- ---------- ---------u UGGC--uuUA GUu-------
Legi.pneu.      AucGcUG--- -ccuaa---- ---------- ---------- ------uaag CAcU---uUA Guu-------
Coxi.burn.      UAcGCA---- ---uaa---- ---------- ---------a gcuucuuccg uUGC---UGG Gau-------
Meth.caps.      cuGGCCG--- -cuuaa---- ---------- ---------- ----gccggc CGGC--CucU Gau-------
Uncu.u01a.      CUCGCCG--- -ccuaa---- ---------- ---------- ------aucc CGGU--GAGc GU--------
Uncu.u01b.      CUCGCCG--- -ccuaa---- ---------- ---------- ------aucc CGGU--GAGc GU--------
Acin.ADP1.      CUaGCUg--- -ccuaa---- ---------- ---------- ---------- gGGC---AGu uUGUc-----
Micr.degr.      cuAGCUG--- -cguaa---- ---------- ---------- ---------g UAGC--UuuU UG--------
Pseu.aeru.      CUAGCUG--- -cuuaa---- ---------- ---------- --------ug CGGC--UAG- ----------
Azot.vine.      CUGGcGG--- -cuuaa---- ---------- ---------- --------ug CC-C--CAG- ----------
Pseu.puti.      CUgGCUG--- -cguaa---- ------gcag uccucuugac ccguugcuuc UGGU---AGC UUcggcucca
Pseu.fluo.-1.   cUcGCUG--- -cuuaa---- ----uugcag c-----ugac a-ugcacucc UGGU---Acc uUcgggucca
Pseu.fluo.-2.   cUcGCUG--- -cguaa---- ------gcag cucu---agc cuugagcuuc UGGU---Acc uUcgggucca
Pseu.syri.-1.   CUaGCUG--- -cguaa---- ------gcag c-cu---agc c--gcacuuc UGGU---AGc Uucggcucca
Pseu.syri.-2.   CUcGCCG--- -cguaa---- ------gcgg ugcu---agc c--uuccuuc UGGU---AGc uUcggcucca
Mari.hydr.      cuGGCGG--- -cguaa---- ---------- ---------- ---------g CCGU--Ucca GU--------
Pseu.halo.      CUAGCaG--- -cuuag---- ---------- ---------- --------gc UgGC--UAG- ----------
Uncu.ww11.      CUAGCaG--- -cuuag---- ---------- ---------- --------gc UaGC--UAG- ----------
Shew.putr.      CUAGCcG--- -cuuaa---- ---------- ---------- --------ug CcGC--UAG- ----------
Colw.spec.      CuAGCcG--- -cuuag---- ---------- ---------- --gcuagcca UcGC-cUuGa aa--------
Phot.phos.      CUaGCAG--- -cuuaauac- ---------- ---------- ---------c CUGC-uaAGa GC--------
Vibr.chol.      CUaGCAG--- -cuuaauac- ---------- ---------- ---------c CUGC-ucAGa GC--------
Aero.salm.      CUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-aUAGa GC--------
Uncu.vlw3.      CucGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-gcuGa GC--------
Uncu.vlw4.      CucGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-gcuGa GC--------
Uncu.vls1.-3.   CucGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-gcuGa GC--------
Uncu.rca3.      CucGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-gcuGa GC--------
Uncu.vls1.-4.   CucGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-gcuGa GC--------
Uncu.ww-9.      CucGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-gcuGa GC--------
Uncu.ww10.      CucGCAG--- -uuuaauaa- ---------- ---------- ---------c CUGC-gcuGa GC--------
Uncu.vlw5.      CucGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-gcuGa GC--------
Uncu.vlw6.      CucGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-gcuGa GC--------
Uncu.rca4.      UUaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-ucGGA GC--------
Uncu.rca7.      UUaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-ucGGA GC--------
Uncu.rca8.      UUaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-ucGGA GC--------
Uncu.lem1.      UUaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-ucGGA GC--------
Uncu.lem2.      UUaGCAG--- -cuuaauau- ---------- ---------- ---------g CUGC-uaGGA cU--------
Past.mult.      uUaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-ucAuA GC--------
Mann.haem.      UUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGCuuUAAA GC--------
Haem.somn.      uUaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-ucAuA GC--------
Haem.infl.      uuAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-aUuuA GC--------
Haem.ducr.      uuAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-aUuuA GC--------
Acti.pleu.      uUaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-ucAuA GC--------
Acti.acti.      uuAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-cUuuA GC--------
Buch.aphi.      UUAGCAG--- -cuuaaaaa- ---------- ---------- ---------a CUGU-aUAAA GC--------
Buch.APS-.      UUAgCAG--- -cuuaaaaa- ---------- ---------- ---------a CUGa-aUAAA GC--------
Esch.coli.-1.   UUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGA GC--------
Esch.coli.-2.   UUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGA GC--------
Esch.coli.-3.   UUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGA GC--------
Prov.rett.      UUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGA GC--------
Salm.typh.-1.   UUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGA GC--------
Salm.typh.-2.   UUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGA GC--------
Salm.ente.-1.   UUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGA GC--------
Salm.ente.-2.   UUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGA GC--------
Shig.flex.      UUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGA GC--------
Shig.dyse.      UUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGA GC--------
Salm.para.      UUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGA GC--------
Erwi.caro.      UUaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uaAGA GC--------
Erwi.chry.      UUagcAG--- -cuuaauca- ---------- ---------- --------gc CU---aaGAA aCugaaggug
Kleb.pneu.      UuaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-ucuGA GC--------
Uncu.rca1.      CUAGCAG--- -cuuaauac- ---------- ---------- ---------c CUGC-uUAGa GC--------
Uncu.vls1.-1.   CUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGa GC--------
Uncu.vls3.      CUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGa GC--------
Uncu.vls4.      CUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGa GC--------
Uncu.ww-1.      UUaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uaAGA GC--------
Uncu.rca2.      UUaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uaAGA GC--------
Uncu.ww-2.      UUaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uaAGA GC--------
Uncu.ww-3.      UUaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uaAGA GC--------
Uncu.ql-1.      UUaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uaAGA GC--------
Uncu.ww-4.      UUaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uaAGA GC--------
Uncu.vls1.-2.pa.---------- ---------- ---------- ---------- ---------- ---------- ----------
Uncu.vls5.      UUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGA GC--------
Uncu.fs-1.      UUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGA GC--------
Uncu.vls6.      UUaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uaAGA GC--------
Uncu.fs-2.      UUaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uaAGA GC--------
Uncu.ww-5.      UUaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uaAGA GC--------
Uncu.ww-6.      UuaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-ucuGA GC--------
Uncu.vlw1.      UUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGG GC--------
Uncu.vls7.      UUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGA GC--------
Uncu.vls8.      UUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGA GC--------
Uncu.vls9.      UUAGCAG--- -cuuaauac- ---------- ---------- ---------c CUGC-uUAGA GC--------
Uncu.vlw2.      CUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGa GC--------
Uncu.ww-7.      UUaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uaAGA GC--------
Uncu.ww-8.      UuaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uccGA GC--------
Yers.ente.      UUAGCaG--- -cuuaau--- ---------- ---------- ---------- CaGC-cUAAG aaac------
Yers.pest.      CUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC-uUAGa GC--------
Desu.vulg.      cUGGCUG--- -cuuaa---- ---------- ---------- ------uuga CGGC--CAcG ----------
Desu.desu.      UaCGCUG--- -ccuaauaa- ---------- ---------- ---------- CAGC--GaGG ----------
Geob.sulf.      GUAGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC--UAC- ----------
Geob.meta.      GUAGCAG--- -cuuaauac- ---------- ---------- ---------c CUGC--UAC- ----------
Heli.pylo.      AAAGcuG--- -cgugaguua a--------- ---------- ---------u CucC-uUUUG GaGc------
Camp.jeju.      aaAGCUG--- -cguaaguu- ---------- ---------- ---------- CAGU--UgaG c---------
Fuso.nucl.-1.   uUAGCUG--- -cuuag---- ---------- ---------- --------uu CAGC--UAcA cCu-------
Fuso.nucl.-2.   uUAGCUG--- -cuuag---- ---------- ---------- --------uu CAGC--UAcA cCu-------
Fuso.nucl.-3.   uUAGCUG--- -cuuag---- ---------- ---------- --------uu CAGC--UAcA cCu-------
Stre.coel.      cUCGCUG--- -ccugaucu- ---------- ---------- ------cagg UAGC--GAaG cGaGcc----
Ther.fusc.      cUCGCUg--- -cuuga---- ---------- ---------- ------ucga gAGU--GAcu c---------
Trop.whip.      cUUGcUG--- -cuuaa---- ---------- ---------- ---------g CGcU-uAGau c---------
Myco.lepr.      cUCGcUG--- -ccuaa---- ---------- ---------- ---------g CGaU--GGcu AGUc------
Myco.aviu.      cUCGcUG--- -ccuaa---- ---------- ---------- ---------g CGaC--GGcu AGUc------
Myco.tube.      cUCGcUG--- -ccuaa---- ---------- ---------- ---------g CGaC--GGcu aguc------
Myco.bovi.      cUCGcUG--- -ccuaa---- ---------- ---------- ---------g CGaC--GGcu AGUc------
Myco.mari.      cUCGcUG--- -ccuaa---- ---------- ---------- ---------g CGaC--GGcu AGUc------
Myco.smeg.      cUCGcUG--- -ccuaa---- ---------- ---------- ---------g CGaC--GGcu GGUc------
Cory.diph.      -UcGcUG--- -ccuaa---- ---------- ---------- ---uuugcag CGaC-cuGcG uGUc------
Cory.glut.      -UcGcUG--- -cauaa---- ---------- ---------- -----gcaag CGaC--cGcG uGUc------
Desu.hafn.      -ucGCcG--- -cuuaa---- ---------- ----ggcgua agccccgaaa CuGC--uu-G uGUccgug--
Deha.ethe.      cuGGCUA--- -aauaa---- ---------- ----gacagc acauccugcu UGGC-cCcaC cucAAcgggu
Heli.mobi.      UUaGCUG--- -cuuaa---- ---------- ---------- -------uug CAGUc--GAA ----------
Baci.halo.      UUaGCUG--- -ccuaa---- ---------- ---------- --------gc UAGC--aAAU GCGGu-----
Baci.stea.      UUAGCUG--- -ccuaa---- ---------- ---------- ----uugcug CAGC--UAGc uCcu------
Baci.mega.      uuAGCUG--- -cauaauagu ag-------- ---------- --------cu UAGC-gU--- ----------
Baci.subt.      UUaGCUG--- -ccuaauaa- ---------- ---------- -------gcg CAGC--gAGa ----------
Stap.sapr.      GUAGcUG--- -cguaaua-- ---------- ---------- ---------g CAcU-cUGCa ----------
Stap.epid.      GUaGcUG--- -cguaauag- ---------- ---------- ---------c CAcU---GCa ----------
Stap.aure.-1.   GUAGcUG--- -ccuaauc-- ---------- ---------- ---------g CAcU-cUGCa ----------
Stap.aure.-2.   GUAGcUG--- -ccuaauc-- ---------- ---------- ---------g CAcU-cUGCa ----------
Stap.aure.-3.   GUAGcUG--- -ccuaauc-- ---------- ---------- ---------u CAcU-cUGCa ----------
Stap.aure.-4.   GUAGcUG--- -ccuaauc-- ---------- ---------- ---------g CAcU-cUGCa ----------
Stap.aure.-5.   GUAGcUG--- -ccuaauc-- ---------- ---------- ---------g CAcU-cUGCa ----------
Stap.xylo.      GUAGcUG--- -cguaaua-- ---------- ---------- ---------g CAcU-cUGCa ----------
Baci.anth.      UUaGcUG--- -cuuaauu-- ---------- ---------- ---------g CAcU---AAA G---------
List.inno.      uUcGCUG--- -ccuaauaa- ---------- ---------- ---------g CAGU--aGcA uagcu-----
List.mono.      uUcGCUG--- -ccuaauaa- ---------- ---------- ---------g CAGU--aGcA uagcu-----
List.gray.-1.   uUcGCUG--- -ccuaauaa- ---------- ---------- ---------g CAGU--aGcA uagcu-----
List.gray.-2.   UUcGCUG--- -ccuaaua-- ---------- ---------- ---------g CAGU-cuGAA uagcu-----
List.ivan.      uUcGCUG--- -ccuaauaa- ---------- ---------- ---------g CAGU--aGcA uagcu-----
List.seel.      uUcGCUG--- -ccuaauaa- ---------- ---------- ---------g CAGU--aGcA uagcu-----
List.wels.      uUcGCUG--- -ccuaauaa- ---------- ---------- ---------g CAGU--aGcA uagcu-----
Leuc.mese.      AUCGCUG--- -ccuaaaaa- ---------- ---------- ---------c CAGU--GAU- GCGuA-----
Leuc.pseu.      AUcGCUG--- -cuuaaaaa- ---------- ---------- ---------c CAGC--aAU- aCGUA-----
Leuc.lact.      AUCGCUG--- -ccuaaaaa- ---------- ---------- ---------a CAGU--GAU- GCGuc-----
Lact.delb.      uUAGCUG--- -ccuaaaaa- ---------- ---------- ---------- CAGU--UA-- GCGUA-----
Lact.gass.      guAGCUg--- -cuuaguca- ---------- ---------- ---------- -GGC--U--- GCGU------
Lact.sake.      gUAGCUg--- -ccuaaaca- ---------- ---------- ---------c cAGC-aUA-- GCGU------
Lact.helv.      UuaGCUG--- -cuuaauu-- ---------- ---------- ---------- UAGC-gc-AU GCGU------
Lact.gall.      UuaGCUG--- -cuuaauu-- ---------- ---------- ---------- UAGC-gc-AU GCGU------
Lact.plan.-1.   uuaGCUg--- -ccuaaua-- ---------- ---------- ---------- -AGC-gcuuA aCGUA-----
Carn.pisc.pa.   ---nnnn--- -nnnnnnnn- ---------- ---------- ---------n nnnn----nn nnnnn-----
Ente.faec.-1.   uuaGCUG--- -ccuaaaaa- ---------- ---------- ---------c CAGC----uA GCGAA-----
Ente.faec.-2.   uuaGCUG--- -ccuaaaaa- ---------- ---------- ---------- CAGU----uA GCGUA-----
Ente.dura.      uuaGCUG--- -ccuaaaaa- ---------- ---------- ---------- CAGU----uA GCGUA-----
Oeno.oeni.      uuaGCUG--- -ccuaaucg- ---------- ---------- ---------- CAGU-----a GCGUA-----
Lact.lact.-1.   auGGCaG--- -ccuaaa--- ---------- ---------- ---------- CaGC-aCcaU GCGU------
Lact.lact.-2.   auGGCaG--- -ccuaaa--- ---------- ---------- ---------- CaGC-aCcaU GCGU------
Lact.lact.-3.   auGGCaG--- -ccuaaa--- ---------- ---------- ---------- CaGC-aCcaU GCGU------
Lact.lact.-4.   auGGCaG--- -ccuaaa--- ---------- ---------- ---------- CaGC-aCcaU GCGU------
Lact.garv.      cucGCUG--- -ccuaaa--- ---------- ---------- -------cac CAGC----uU GCGU------
Lact.plan.-2.   uuaGCUG--- -ccuaaa--- ---------- ---------- -------cca CAGC----cG GCGU------
Pedi.pent.      uuaGCUG--- -ccuaauag- ---------- ---------- ---------- UAGC---uuG aCGU------
Lact.raff.      GuaGCUG--- -ccuaaa--- ---------- ---------- -------cca CAGC----CU GCGU------
Stre.equi.      uuaGCUG--- -ccuaaaaa- ---------- ---------- ---------c CAGC----cG GCGU------
Stre.uber.      uuAGCUG--- -ccuaaaaa- ---------- ---------- ---------c CAGC--U--A GCGU------
Stre.pyog.      uuAGCUG--- -ccuaaaaa- ---------- ---------- ---------c CAGC--U--A GCGU------
Stre.suis.pa.   uuaGCAG--- -cuuaauaa- ---------- ---------- ---------c CUGC----cU GCGU------
Stre.ther.      GuaGCAG--- -ccuaaaca- ---------- ---------- ---------c CUGC----Uc GCGU------
Stre.gord.      UuaGCUG--- -ccuaaaaa- ---------- ---------- ---------c CAGC----GG GCGU------
Stre.miti.      cUaGCUG--- -ccuaaaaa- ---------- ---------- ---------c CAGC---A-G GCGU------
Stre.pneu.      cUaGCUG--- -ccuaaaaa- ---------- ---------- ---------c CAGC---A-G GCGU------
Stre.muta.      GuaGCUG--- -ccuaaaaa- ---------- ---------- ---------c CAGC----CU GUGU------
Myco.capr.      AuGuUUG--- -cuuaauaa- ---------- ---------- ------cuac UAGu--U-UA ----------
Urea.urea.      GcUUUUGcgu -acuaauuag ---------- ---------- ---uuauuag UAGA--AaC- ----------
Spir.kunk.      AUgUUAGcag -cuuaauucc ---------- ---------- ----ucgcug UUAGaggAUc GcUagcc---
Myco.geni.      GCuUUUG--- -cauaaguag ---------- ---------- ------auac UAAA---GCu ----------
Myco.pneu.      GCuUUcG--- -cuuagaac- ---------- ---------- ------auac UaAA---GCu ----------
Myco.pulm.      aUcaAGA--- -uuuaauga- ---------- ---------- uuagucaaaa UCUa--aAcc aaaA------
Clos.ther.      GCuGCUG--- -ccuaauau- ---------- ---------- -------agg CAGC-ccGUc AG--------
Ther.teng.      -ACGCUG--- -ccuaauua- ---------- ---------- ------aagg CGGC-cGUcc AG--------
Clos.perf.      UuAGCAG--- -cuuaauuu- ---------- ---------- ------agcg CUGC--UcAU -Cc-------
Clos.botu.      UuAGCUG--- -ccuaauag- ---------- ---------- -------uug CAGC--UcGU -CA-------
Clos.diff.      aUAGCAG--- -ccuag---- ---------- ---------- ---------- UUGC--UGcU ----------
Clos.acet.-1.pa.---------- ---------- ---------- ---------- ---------- ---------- ----------
Clos.acet.-2.   UUAGCUG--- -cguag---- ---------- ---------- ---------u CAGC--UAA- ----------
Rumi.albu.      aaGGCaa--- -gcuaa---- ---------- ---------- ---------- ggGC--Cacc ----------
Carb.hydr.      UUaGCuG--- -cuuaauaa- ---------- ---------- ---------- C-GC---AGc -Ua-------
support         -S-SSSS--- ---------- ---------- ---------- ---------- SSSS---S-- ----------

                ....|....| ....|....| ....|....| ....|....| ....|....| ....|....| ....|....|
                   285        295        305        315        325        335        345    
p-pre           ---------- ---------- ---------- --kkkkkkk- -------lll llmmmmmm-- ---------n
psknts          ---------- ---------- ---------- --(((((((( (((((((((( (((((((((( ((((((((((
hel-10          ---------- ---------- ---------- ---------- ---------- ---------- ----------
hel-1           ---------- ---------- ---------- --6666666- -------666 66666666-- ---------7
hel-x           ---------- ---------- ---------- --aaaaaaa- -------bbb bbcccccc-- ----------
Aqui.aeol.      ---------- ---------- ---------- --CGUCC-C- -------CGG UA--GGUU-- --------uG
Ther.mari.      ---------- ---------- ---------- --CGUCCUC- -------UCC GA--AGUU-- ---------G
Chlo.aura.-1.   ---------- ---------- ---------- -cGCUCGcCg uagcucccCc GA--UGGU-- ---------U
Chlo.aura.-2.pa.---------- ---------- ---------- -cGCUCGcCg uagcucccCc GA--UGGU-- ---------U
Ther.ther.      ---------- ---------- ---------- --CCUCGCc- -------CGG U--A-GCCcu ---------G
Dein.radi.      ---------- ---------- ---------- --UGacGAC- -------CGU Gc-A-GCCcg ---------G
Porp.ging.      uucaucgccg ccaaaguggc agcgacgaga --CAuCGCC- -------CGA --GCaGCUuu u--------U
Bact.frag.      uuaauccagg caccaggugc caggacgaga --CauCACU- -------CGG --AA-GCUgu ug-------C
Bact.fors.      uuaauccuua cacaaggugu uuggacgaga --CauCACC- -------CGG --Aa-GCCgu gg-------C
Tann.fors.      uuaauccuua cacaaggugu uuggacgaga --CauCACC- -------CGG --Aa-GCCgu gg-------C
Prev.inte.      uuuauucgac uauuagauag uugaacgaga --CacUGCU- --------CC a-aa-GAUgu ug-------U
Cyto.hutc.      uugaguggag cuguuaagaa cagcacccgg ccACAUCUC- --------aC A-CGGCUU-c ug-------U
Chlo.tepi.      ucguccug-- ---------- -----cggug aaUGcGCUUa c------UcU GAA-GCCGcc ----------
Chla.psit.      ccucua---- ---------- ------gaua accCGGUGc- -------UCA UA--GACUcc ---------A
Chla.pneu.      ucucua---- ---------- ------ggua accCGGUAU- -------cUG CG--AGCUcc ---------A
Chla.abor.      ccucua---- ---------- ------gaua accCGGUcU- -------UCA UG--GACUcu ---------A
Chla.trac.      cg-------- ---------- ------ggug accCGGUGU- -------UCG cG--AGCUcc ---------A
Chla.muri.      cu-------- ---------- ------ggua accCGGUGU- -------UCG cG--AGCUcc ---------A
Osci.spec.      ---------- ---------- ---------- -gGUCUaUA- -------GCU U---gac--- ---------U
Anab.spec.      agc------- ---------- ---------- --GUCUUCG- -------GUU U---gac--- ---------U
Chro.spec.      ---------- ---------- ---------- --GcUUUUA- -------GUC c---gac--- ---------U
Nost.punc.      ---------- ---------- ---------- --GUCUUUA- -------GUU U---gac--- ---------U
Frem.dipl.      ---------- ---------- ---------- --GUCUUUA- -------GUC C---gac--- ---------U
Plec.bory.      ---------- ---------- ---------- --GCUUACc- -------GUC U---gac--- ---------A
Tric.eryt.      ---------- ---------- ---------- --GUCUGUG- -------GUU u---gac--- ---------U
Syne.spec.-1.   ---------- ---------- ---------- --ACUUCUu- -------UUC U---gac--- ---------U
Syne.spec.-2.   ---------- ---------- ---------- --GUCUAGu- --------CG UA--gac--- ---------U
Syne.spec.-3.   ---------- ---------- ---------- --UCAGcCU- -------ugU CAcccaa--- ---------a
Syne.spec.-4.   ---------- ---------- ---------- --UCAGCCU- -------uaU CAcccaa--- ---------a
Proc.mari.-2.   ---------- ---------- ---------- --uCAGCCU- -------uaU CAcccaa--- ---------a
Proc.mari.-1.   ---------- ---------- ---------- --UCAGcCU- -------uaU Caaccaa--- ---------a
Syne.spec.-5.   ---------- ---------- ---------- --ucagcCU- -------ugU CAcccaa--- ---------a
Syne.spec.-6.   ---------- ---------- ---------- --ucagcCU- -------ugU CAcccaa--- ---------a
Cyan.para.cy.   ---------- ---------- ---------- --AUUUAUU- ---------- --GuuUAu-- ----------
Porp.purp.cl.   ---------- ---------- ---------u acgaaUAUU- ---------- -cuGuUAG-- ----------
Odon.sine.cl.   ---------- ---------- ---------u ucGCUAUAA- ---------- --uUUAUA-- ----------
Pavl.luth.cl.pa.aaa------- ---------- -------ccu uagcuagaa- ---------- ----GcaC-- ----------
Boli.spec.pl.   ---------- ---------- -----uccau cucUUAaAA- ---------a --UUUGaA-- ---------a
Guil.thet.cl.   ---------- ---------- ------uuuc uuAGUAgAA- ---------A --UUGGaG-- ---------a
Thal.weis.cl.   ---------- ---------- ------uuuc --AUUAUAA- ---------- --CUGGAc-- ----------
Meso.viri.cl.   ---------- ---------- ----agcauu uuUgAUUUG- -------uUA AA-uacaa-- ---------U
Recl.amer.mt.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fibb.succ.      ---------- ---------- ---------- -cgCCGGGCc ---u---CAU UC----CGc- ---------U
Trep.dent.      ---------- ---------- ---------- --GAAUCug- -------CUU UG--caCU-- ---------G
Trep.pall.      ---------- ---------- ---------- --GGCCuGU- -------GUU UG--cgCU-- ---------G
Borr.burg.      ---------- ---------- ---------- --AGAGGGUu ---uu--GuU GA--AUUUg- ---------G
Rhod.palu.      ---------- ---------- ---------- ---------- ----cacUUU AA-agcCc-- ---------U
Magn.magn.-1.   ---------- ---------- ---------- ---------- ---cga-cCU Aa-aguCC-- ---------U
Magn.magn.-2.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhod.rubr.      ---------- ---------- ---------- ---------- ---------- ---------- ----------
Meth.exto.pa.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Brad.japo.      ---------- ---------- ---------- ---------- ---ccauCUU AA-aguCc-- ---------U
Meso.loti.      ---------- ---------- ---------- ---------- --uucaaaUc AA--gccc-- ---------U
Bruc.meli.      ---------- ---------- ---------- --------aa acccacucUa AA--gucc-- ---------U
Sino.meli.      ---------- ---------- ---------- ---------- acuucaaaUc Aa--guCc-- ---------U
Rhiz.legu.      ---------- ---------- ---------- ---------- acuucaa-Uc AA-agucc-- ---------U
Agro.tume.      ---------- ---------- ---------- ---------a auuccgcuCU AA--gucc-- ---------U
Caul.cres.      ---------- ---------- ---------- ---------- uucgccuCUu AA--gucc-- ---------U
Sili.pome.      ---------- ---------- ---------- ---------- -ccgaaacUU Aa--gccc-- ---------U
Rhod.spha.      ---------- ---------- ---------- ---------- --cgaaacUU AA--gccc-- ---------U
Rick.prow.      ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rick.typh.      ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rick.cono.      ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sphi.arom.      ---------- ---------- ---------- ---------- ---------U AAc-gcC--- ----------
Ehrl.chaf.      ---------- ---------- ---------- ---------- ---------- ---------- ----------
Wolb.spec.      ---------- ---------- ---------- ---------- ---------- ---------- ---------U
Chro.viol.      ---------- ---------- ---------- --CACUACA- ---------- -aCGGUUC-- ---------G
Neis.gono.      ---------- ---------- ---------- --CGUUGCa- ---------- --GCAGUCgg ---------U
Neis.meni.-1.   ---------- ---------- ---------- --CGUUGCa- ---------- --GCAGUCgg ---------U
Neis.meni.-2.   ---------- ---------- ---------- --CGUUGCa- ---------- --GCAGUCgg ---------U
Uncu.u02-.      ---------- ---------- ---------- --UCUCACa- ---------- --CCAGCUug ---------C
Nitr.euro.      ---------- ---------- ---------- --CUCCACa- ---------- --CCGGUGgg ---------C
Meth.glyc.      ---------- ---------- ---------- --CGCUGCa- ---------- --CCGAaggg ---------C
Nitr.cryo.      ---------- ---------- ---------- --CUCUGCa- ---------- --CCGAUGgg ---------C
Uncu.u04-.pa.   ---------- ---------- ---------- --CGCUGCa- ---------- --CCGGaggg ---------C
Alca.faec.      ---------- ---------- ---------- --CACUGCa- ---------- --CUAAUUug ---------U
Bord.para.      ---------- ---------- ---------- --cGCUGCa- ---------- --CUGAUCug ---------U
Bord.pert.      ---------- ---------- ---------- --cGCUGCa- ---------- --CUGAUCug ---------U
Bord.bron.am.   ---------- ---------- ---------- --cGCUGCa- ---------- --CUGAUCug ---------U
Coma.test.      ---------- ---------- ---------- --CCUUGCA- ---------- --aCAGCacg ---------C
Hydr.pall.      ---------- ---------- ---------- --CCUUGCA- ---------- --aCAGCagg ---------C
Vari.para.      ---------- ---------- ---------- --CCUUGCA- ---------- --aCAGUUgg ---------C
Burk.pseu.      ---------- ---------- ---------- --CCUCUGc- ---------- --CUAGUUca ---------C
Burk.mall.      ---------- ---------- ---------- --CCUCUGc- ---------- --CUAGUUca ---------C
Burk.cepa.      ---------- ---------- ---------- --CCUCUGc- ---------- --CUAGUUca ---------C
Burk.fung.      ---------- ---------- ---------- --CCUCUGc- ---------- --CUAGUUua ---------C
Alca.eutr.      ---------- ---------- ---------- --CCUCGCa- ---------- --CUGGCUcg ---------C
Rals.eutr.      ---------- ---------- ---------- --CCUCGCa- ---------- --CUGGCUcg ---------C
Rals.meta.      ---------- ---------- ---------- --CCUCGCa- ---------- --CUGGCUcg ---------C
Rals.sola.      ---------- ---------- ---------- --CCUCGCa- ---------- --CUAGCUug ---------C
Rals.pick.      ---------- ---------- ---------- --CCUCGCa- ---------- --CUGGCUcg ---------C
Acid.ferr.-1.   ---------- ---------- ---------- --CCCUCUG- ---------- cCCGGAUUug ---------U
Acid.ferr.-2.   ---------- ---------- ---------- --CCCUCUG- ---------- cCCGGAUUug ---------U
Fran.tula.      ---------- ---------- -------auc uaGAUGcGc- -------ACG GAUAUGAua- ---------G
Dich.nodo.      ---------- ---------- ---------- --CGCUUAC- ---------- -cUAGAUUug ---------U
Xyle.fast.-1.   ---------- ---------- ---------- --GCcUcG-- ------aaaC --UGCuuGug ---------U
Xyle.fast.-2.   ---------- ---------- ---------- --GCcUcG-- ------aaaC --UGCuuGug ---------U
Xyle.fast.-3.   ---------- ---------- ---------- --GCcUcG-- ------aaaC --UGCuuGug ---------U
Xant.camp.      -------gua guucuacagc cgccuaaggc gaACCCccg- ------aAaC --UACuuGug ---------c
Xant.axon.      -------gua guucuacagc cgccuaaggc gaACCCccg- ------aACC --UACuuGug ---------c
Legi.pneu.      ---aaaccau cacuguguac uggccaauaa acCcagUAU- -----cccGU UCgACCGa-- --gccc---G
Coxi.burn.      ---------- ---------- ---------- -ucGCUUAU- -----agaUc ccuaccaac- ---------G
Meth.caps.      ---------- ---------- --------ca gcAGCucGC- -------UUa caa--GCg-- ------gcuG
Uncu.u01a.      ---------- ---------- ---------- --CcAUccuu -------UCa GUGCCgAU-- ------acuG
Uncu.u01b.      ---------- ---------- ---------- --CcAUccuu -------UCG GUGCCgAU-- ------accG
Acin.ADP1.      ---------- ---------- ---------- --CGCUuCc- -------UaG aaUaCUUG-- --------ug
Micr.degr.      -----uuaca ccaucuagcg guacgccgcu agCGGUUu-- -----uuAAC a---aGG--- --------ug
Pseu.aeru.      ---------- ---------- ---------- --CAGUCGc- -------Uag GG--GaU--- ---------g
Azot.vine.      ---------- ---------- ---------- --CAGUCUC- -------cag GG--GaU--- ---------g
Pseu.puti.      g--------- ---------- ---------- --CAAUCAc- -------Uag GG--GaU--- ---------g
Pseu.fluo.-1.   g--------- ---------- ---------- --CAAUCAU- -------cag GG--GaU--- ---------g
Pseu.fluo.-2.   g--------- ---------- ---------- --CAAUCAC- -------cag GG--GaU--- ---------g
Pseu.syri.-1.   g--------- ---------- ---------- --CAAUCAU- -------cag GG--GaU--- ---------g
Pseu.syri.-2.   g--------- ---------- ---------- --CAAUCAU- -------cag GG--GaU--- ---------g
Mari.hydr.      ---------- ---------- ---------- --CGUCCUG- -------GCU Ga--GGc--- ---------G
Pseu.halo.      ---------- ---------- ---------- --CGCUCCu- -------UCC Au--GUaU-- ---------U
Uncu.ww11.      ---------- ---------- ---------- --CCAUCUG- -------ACA Ca-gGUCU-- --------cU
Shew.putr.      ---------- ---------- ---------- --CCAUCuA- -------CCA Ca-cGCUU-- --------uG
Colw.spec.      ---------- ---------- ---------- --UCucUcc- -------uau ug-------- ---------g
Phot.phos.      ---------- ---------- ---------- --GCUCCUG- -------CCC Ua--gCUUcc ---------g
Vibr.chol.      ---------- ---------- ---------- --CCUUCCU- -------CCC Ua--gCUUcc ---------G
Aero.salm.      ---------- ---------- ---------- --CCUUCUa- -------CCC UA--GcuU-- ---------g
Uncu.vlw3.      ---------- ---------- ---------- --CCUUCUa- -------CCC UA--GcuU-- ---------g
Uncu.vlw4.      ---------- ---------- ---------- --CCUUCUa- -------CCC UA--GcuU-- ---------g
Uncu.vls1.-3.   ---------- ---------- ---------- --CCUUCUa- -------CCC UA--GcuU-- ---------g
Uncu.rca3.      ---------- ---------- ---------- --CCUUCUa- -------CCC UA--GcuU-- ---------g
Uncu.vls1.-4.   ---------- ---------- ---------- --CCUUCUa- -------CCC UA--GcuU-- ---------g
Uncu.ww-9.      ---------- ---------- ---------- --CCUUCUa- -------CCC UA--GcuU-- ---------g
Uncu.ww10.      ---------- ---------- ---------- --CCUUCUa- -------CCC UA--GcuU-- ---------g
Uncu.vlw5.      ---------- ---------- ---------- --CCUUCUc- -------CCC UA--GcuU-- ---------g
Uncu.vlw6.      ---------- ---------- ---------- --CCUUCUc- -------CCC cA--GcuU-- ---------g
Uncu.rca4.      ---------- ---------- ---------- --CCUUCUA- -------CCC UA--GcuU-- ---------g
Uncu.rca7.      ---------- ---------- ---------- --CCUUCUA- -------CCC UA--GcuU-- ---------g
Uncu.rca8.      ---------- ---------- ---------- --CCUUCUA- -------CCC UA--GcuU-- ---------g
Uncu.lem1.      ---------- ---------- ---------- --CCUUCUA- -------CCC UA--GcuU-- ---------g
Uncu.lem2.      ---------- ---------- ---------- --CCUUcUn- -------naC UA--GcuU-- ---------g
Past.mult.      ---------- ---------- ---------- --CUUCUCU- -------CCC Ca--gCUUcc ---------g
Mann.haem.      ---------- ---------- ---------- --CUUAUCU- -------CCU Ca--gCUUcc ---------g
Haem.somn.      ---------- ---------- ---------- --CUUCACU- -------CCC Ua--gCUUuc ---------g
Haem.infl.      ---------- ---------- ---------- --CUUCGCG- -------CUC Ca--gCUUcc ---------g
Haem.ducr.      ---------- ---------- ---------- --CUUCGCG- -------CCC Ua--gCUUuc ---------g
Acti.pleu.      ---------- ---------- ---------- --CUUAUCG- -------CCU Ca--gCUUcc ---------g
Acti.acti.      ---------- ---------- ---------- --CUUCGCU- -------CCC Ca--gCUUcc ---------g
Buch.aphi.      ---------- ---------- ---------- --CCUUUCa- -------UCU Cu-gaCUUc- ---------U
Buch.APS-.      ---------- ---------- ---------- --CCUUCCU- -------UCU UA--UCCUcc --------uU
Esch.coli.-1.   ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCCUcc ---------g
Esch.coli.-2.   ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCCUcc ---------g
Esch.coli.-3.   ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCCUcc ---------g
Prov.rett.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gcCUcc ---------g
Salm.typh.-1.   ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCCUcc ---------g
Salm.typh.-2.   ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCCUcc ---------g
Salm.ente.-1.   ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCCUcc ---------g
Salm.ente.-2.   ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCUUcc ---------g
Shig.flex.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCCUcc ---------g
Shig.dyse.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCCUcc ---------g
Salm.para.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCCUcc ---------g
Erwi.caro.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCCUcc ---------g
Erwi.chry.      u--------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCCUcc ---------g
Kleb.pneu.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--cgUUcc ---------g
Uncu.rca1.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCUUcc ---------g
Uncu.vls1.-1.   ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCUUcc ---------G
Uncu.vls3.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCUUcc ---------G
Uncu.vls4.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCUUcc ---------G
Uncu.ww-1.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCUUcc ---------g
Uncu.rca2.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCUUcc ---------g
Uncu.ww-2.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCUUcc ---------g
Uncu.ww-3.      ---------- ---------- ---------- --CCUCUCa- -------CCC Ua--gCUUcc ---------g
Uncu.ql-1.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCUUcc ---------g
Uncu.ww-4.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCUUcc ---------g
Uncu.vls1.-2.pa.---------- ---------- ---------- ---------- ---------- ---------- ----------
Uncu.vls5.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCCUcc ---------g
Uncu.fs-1.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCCUcc ---------g
Uncu.vls6.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCUUcc ---------g
Uncu.fs-2.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCUUcc ---------g
Uncu.ww-5.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCUUcc ---------g
Uncu.ww-6.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCUUcc ---------g
Uncu.vlw1.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCUUcc ---------g
Uncu.vls7.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCUUcc ---------g
Uncu.vls8.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCCUcc ---------g
Uncu.vls9.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCCUcc ---------g
Uncu.vlw2.      ---------- ---------- ---------- --CUUCUCU- -------CCC Ua--gCCUcc ---------G
Uncu.ww-7.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCUUcc ---------g
Uncu.ww-8.      ---------- ---------- ---------- --CCUCUCU- -------CCC Ua--gCUUcc ---------g
Yers.ente.      ---------- ---------- ugaagauuc- --CCUCUCU- -------CCC Ua--gCCUcc ---------g
Yers.pest.      ---------- ---------- ---------- --CCUCUCU- -------gCC Ua--gCCUcc ---------G
Desu.vulg.      ---------- ---------- ---------- -uCGaacCg- -------GUU ca-cG----- ---------C
Desu.desu.      ---------c aaugaccguu uaacggucgc gcCGaUCAg- -------gGc CA-uG----- ---------C
Geob.sulf.      ---------- ---------- ---------- --CGAUCCG- -------CUg a---GCCUcu ---------C
Geob.meta.      ---------- ---------- ---------- --CGAUCCG- -------Ccg a---GCCUcu ---------C
Heli.pylo.      ---------- ---------- ---------- ---UGGAcU- -------GAU UA--GAAUu- ---------U
Camp.jeju.      ---------- ---------- ---------- --CUGAAAu- -------UUA AG---UcAu- ---------A
Fuso.nucl.-1.   ---------- ---------- uggauaacuu --aUUcUAU- -------aCG Gg---UuUu- ---------U
Fuso.nucl.-2.   ---------- ---------- uggauaacuu --aUUcUAU- -------aCG Gg---UuUu- ---------U
Fuso.nucl.-3.   ---------- ---------- uggauaacuu --aUUcUAU- -------aCG Ag---UuUu- ---------U
Stre.coel.      ---------- --------uc cuacuaaggg agUGUCAGc- -------CCG GG---gcU-- ---------G
Ther.fusc.      ---------- ---------- ---------- --UGUCGGc- -------CUG GG---agC-- ---------G
Trop.whip.      ---------- ---------- ---------- --UGUCGGu- ------aUAG GG---cUU-- ---------G
Myco.lepr.      ---------- ---------- ---------- --UGUCAGa- -------CCG GG---aAC-- ---------g
Myco.aviu.      ---------- ---------- ---------- --UGUCAGa- -------CCG GG---aaC-- ---------g
Myco.tube.      ---------- ---------- ---------- --UGUCAGa- -------CCG GG---aaC-- ---------g
Myco.bovi.      ---------- ---------- ---------- --UGUCAGa- -------CCG GG---aaC-- ---------g
Myco.mari.      ---------- ---------- ---------- --UGUCGGa- -------CCG GG---aaC-- ---------g
Myco.smeg.      ---------- ---------- ---------- --UGUCAGa- -------CCG GG---agU-- ---------g
Cory.diph.      ---------- ---------- ---------- --UGUCAGc- -------CUA GA----UU-- --------cG
Cory.glut.      ---------- ---------- ---------- --UGUCAGc- -------CUA GG---gaa-- ---------G
Desu.hafn.      ---------- ---------- ---------- --CUCGcaG- ---------- --CGUaGG-- ---------G
Deha.ethe.      ---------- ---------- --------ca ggUUUG-gG- -------UGc cGauuAGuug ag-------G
Heli.mobi.      ---------- ---------- ---------- --CCUCUUc- ---------- -uCCUCugu- ---------G
Baci.halo.      ---------- ---------- ---------- --UCCGcCc- ---------- --U-CCAUc- ---------G
Baci.stea.      ---------- ---------- ---------- --CCCgCcA- ---------- ---ucgcCc- ---------G
Baci.mega.      ---------- ---------- ---------- --UCCUccC- ---------- --U-CCAUc- ---------G
Baci.subt.      ---------- ---------- ---------- --CUCUUCc- ---------- --uGACAUu- ---------G
Stap.sapr.      ---------- ---------- ---------- --UCGCcU-- ---------- AACGGUAUc- ---------U
Stap.epid.      ---------- ---------- ---------- --UcGCcU-- ---------- AACAGCAUc- ---------U
Stap.aure.-1.   ---------- ---------- ---------- --UCGCcU-- ---------- AACAGCAUu- ---------U
Stap.aure.-2.   ---------- ---------- ---------- --UCGCcU-- ---------- AACAGCAUu- ---------U
Stap.aure.-3.   ---------- ---------- ---------- --UCGCcU-- ---------- AACAGCAUu- ---------U
Stap.aure.-4.   ---------- ---------- ---------- --UCGCcU-- ---------- AACAGCAUu- ---------U
Stap.aure.-5.   ---------- ---------- ---------- --UCGCcU-- ---------- AACAGCAUu- ---------U
Stap.xylo.      ---------- ---------- ---------- --UCGCcU-- ---------- AACGGUAUc- ---------U
Baci.anth.      ---------- ---------- ---------- --GUUCCU-- --------CC CU--CCAUc- ---------G
List.inno.      ---------- ---------- ---------- --GAUCCU-- --------CC GU--GCAUc- ---------G
List.mono.      ---------- ---------- ---------- --GAUCCU-- --------CC GU--GCAUc- ---------G
List.gray.-1.   ---------- ---------- ---------- --GAUCCU-- --------CC GU--GCAUc- ---------G
List.gray.-2.   ---------- ---------- ---------- --GAUCCU-- --------CC GU--GCAUc- ---------A
List.ivan.      ---------- ---------- ---------- --GAUCCU-- --------CC GU--GCAUc- ---------G
List.seel.      ---------- ---------- ---------- --GAUCCU-- --------CC GU--GCAUc- ---------G
List.wels.      ---------- ---------- ---------- --GAUCCU-- --------CC GU--GCAUc- ---------G
Leuc.mese.      ---------- ---------- ---------- --GCUUAA-- --------UC UU--GGuU-- ---------g
Leuc.pseu.      ---------- ---------- ---------- --GCUUAA-- --------UC UU--GGuU-- ---------U
Leuc.lact.      ---------- ---------- ---------- --ACUUAA-- --------UC UU--GGua-- ---------g
Lact.delb.      ---------- ---------- ---------- --GAUCCU-- -------CUC GG---CAUc- ---------g
Lact.gass.      ---------- ---------- ---------- --GAUCCa-- --------au GA-CGGAUu- ---------G
Lact.sake.      ---------- ---------- ---------- --GAUCCG-- ---------U CU-GACUUc- ---------A
Lact.helv.      ---------- ---------- ---------- --UGCUCuu- ---------U GU-CGGUU-- --------uA
Lact.gall.      ---------- ---------- ---------- --UGCUCuu- ---------U GU-CGGUU-- --------uA
Lact.plan.-1.   ---------- ---------- ---------- --GAUCCu-- ---------c CC-AGGAUc- ---------G
Carn.pisc.pa.   ---------- ---------- ---------- --nnnnnn-- ---------n nC-GGCAUc- ---------g
Ente.faec.-1.   ---------- ---------- ---------- --GAUCCU-- ---------C CC-GGCAUc- ---------g
Ente.faec.-2.   ---------- ---------- ---------- --GAUCCU-- ---------C UC-GGCAUc- ---------g
Ente.dura.      ---------- ---------- ---------- --GAUCCU-- ---------C UC-GGCAUc- ---------g
Oeno.oeni.      ---------- ---------- ---------- ---GCCcu-- ---------- ---UUGUUga ---------G
Lact.lact.-1.   ---------- ---------- ---------- ---GCCuga- ---------- uuuUUGCUc- ---------a
Lact.lact.-2.   ---------- ---------- ---------- ---GCCuga- ---------- uuuUUGCUc- ---------U
Lact.lact.-3.   ---------- ---------- ---------- ---GCCuga- ---------- uuuUUGCUc- ---------a
Lact.lact.-4.   ---------- ---------- ---------- ---GCCuga- ---------- uuuUUGCUc- ---------a
Lact.garv.      ---------- ---------- ---------- ---AGCUga- ---------- uGaUCGUUc- ---------g
Lact.plan.-2.   ---------- ---------- ---------- ---GCCAga- ---------- cuuUCGUUc- ---------g
Pedi.pent.      ---------- ---------- ---------- --aGAUCCG- ---------- -cCUAGUCuc ---------G
Lact.raff.      ---------- ---------- ---------- ---GCCuga- ---------- cuuUCGCUc- ---------g
Stre.equi.      ---------- ---------- ---------- --GACUUCU- ---------- -AUAGGAUu- ---------G
Stre.uber.      ---------- ---------- ---------- --GACUUCU- ---------- -UCAaGAUu- ---------G
Stre.pyog.      ---------- ---------- ---------- --GACUUCU- ---------- -ACAaGAUu- ---------G
Stre.suis.pa.   ---------- ---------- ---------- --GACCAGU- ---------- -CGCGAAUu- ---------G
Stre.ther.      ---------- ---------- ---------- --GACUUCU- ---------- -AGCAGAUu- ---------G
Stre.gord.      ---------- ---------- ---------- --GACCcGa- ---------- -UUCGGAUu- ---------G
Stre.miti.      ---------- ---------- ---------- --GACCcGa- ---------- -UUUGGAUu- ---------g
Stre.pneu.      ---------- ---------- ---------- --GACCcGa- ---------- -UUUGGAUu- ---------g
Stre.muta.      ---------- ---------- ---------- --GAUCAAU- ---------- -AACAAAUu- ---------G
Myco.capr.      ---------- ---------- ---------- --GUUAUAGu -------auu ucAcGAAuua -uagauauuU
Urea.urea.      ---------- ---------- ---------- --GUUcauu- ---------- AAcAuAAUua cua----uuG
Spir.kunk.      ---------- ---------- ---------- --GUaAUAG- ---------- UAGUUAAU-- -------ugU
Myco.geni.      ---------- ---------- ---------- --ACAGCUG- ---------- --GUGAAU-- --------aG
Myco.pneu.      ---------- ---------- ---------- --ACACGAA- ---------- --UUGAAU-- --------cG
Myco.pulm.      ---------- ---------- ---------- -uCUAGcuUu u------gcU AGcGU-uUa- ---------G
Clos.ther.      ---------- ---------- ---------- ucCAGGGuuc c----ugcGC CUUGG-Gua- ---------g
Ther.teng.      ---------- ---------- ---------- ccugaaaugc c------CaC GUUUcaGG-- --------ac
Clos.perf.      ---------- ---------- ---------- -----UUC-- ---------- --CUCAAUu- ---------g
Clos.botu.      ---------- ---------- ---------- ----GC---- ---------- --CUAAGag- ---------U
Clos.diff.      ---------- ---------- ---------- ---CGUCCc- ---------- UCUUAGUCc- ---------U
Clos.acet.-1.pa.---------- ---------- ---------- ---------- ---------- ---------- ----------
Clos.acet.-2.   ---------- ---------- ---------- ---CGUC--- --------AG c-CUGAGag- ---------U
Rumi.albu.      ---------- ---------- ---------- ---cGUUCuu -------ccU GGgaAGUa-- ---------C
Carb.hydr.      ---------- ---------- ---------- ---CGUCC-- -------UGA CGGAAGCU-- --------uG
support         ---------- ---------- ---------- --SSSSSS-- -------SSS S-SS-SSS-- ----------

                ....|....| ....|....| ....|....| ....|....| ....|....| ....|....| ....|....|
                   355        365        375        385        395        405        415    
p-pre           nnnnn-mmmm mm-------- -------ooo o--------- ---oooo-ll lll------- ---------k
psknts          (((((((((( (((((((((( (((((((pse udoknot-II -))))))))) )))))))))) ))))))))))
hel-10          ---------- ---------- ---------- ---------- ---------- ---------- ----------
hel-1           77777-6666 66-------- -------666 6--------- ---6666-66 666------- ---------6
hel-x           ------cccc cc-------- -------ddd d--------- ---dddd-bb bbb------- ---------a
Aqui.aeol.      CGGGU-GGCC ---------- ---------- ---------- --------UA CCG------- ---------G
Ther.mari.      GCUG--GGCU ---------- ---------- ---------- --------UC GGA------- a--------G
Chlo.aura.-1.   AC-GG-GUCG agcg------ ---------- ---------- --------UC aGca------ ---------G
Chlo.aura.-2.pa.AC-GG-GUCG agcg------ ---------- ---------- --------UC aGca------ ---------G
Ther.ther.      CCGGG-GGC- U--------- ---------- ---------- --------cA CCGga----- ---------a
Dein.radi.      CCUUU-GGCg U--------- ---------- ---------- ---------C GCGgaa---- ---------G
Porp.ging.      CCCGA-AGUa GC-------- ---------- ---------- ---------- UCGauggugc ---------G
Bact.frag.      UCCGA-AGCa UU-------- ---------- ---------- ---------- CCGguucagu ---------G
Bact.fors.      UUCGA-GGCa aU-------- ---------- ---------- ---------- CCGaaccggu ---------G
Tann.fors.      UUCGA-GGCa aU-------- ---------- ---------- ---------- CCGaaccggu ---------G
Prev.inte.      UCCGA-AUCg ga-------- ---------- ---------- ---------- GGguaa-agc ---------G
Cyto.hutc.      UCUGc-GGGC UG-------- ---------- ---------- ---------U Gaacu----- ---------G
Chlo.tepi.      --Gga-UGGC aUaacccgcg c--------- ---------- --------UU GaGccu--a- c--------G
Chla.psit.      CCAGA-GGUU ---------- ---------- ---------- --------UG UGA------- a--------a
Chla.pneu.      CCAGA-GGCU ---------- ---------- ---------- --------UG CAa------- a--------A
Chla.abor.      CCAGA-GGUU ---------- ---------- ---------- --------UG UGAa------ ---------G
Chla.trac.      CCAGA-GGUU ---------- ---------- ---------- --------Uu CGAa------ ---------A
Chla.muri.      CCAGA-GGUU ---------- ---------- ---------- --------Uu CGAa------ ---------A
Osci.spec.      CCGUU-aa-- ---------- ---------- ---------- ---------A GGC------- ---------U
Anab.spec.      CCGUU-aa-- ---------- ---------- ---------- ---------G GAC------- ---------U
Chro.spec.      CCGUU-aa-- ---------- ---------- ---------- ---------c GGC------- ---------U
Nost.punc.      CCGUU-aa-- ---------- ---------- ---------- ---------G GAC------- ---------U
Frem.dipl.      CCGUU-aa-- ---------- ---------- ---------- ---------G GGC------- ---------U
Plec.bory.      CCGUU-aa-- ---------- ---------- ---------- ---------A GAU------- ---------a
Tric.eryt.      CCGUU-aa-- ---------- ---------- ---------- ---------u AAU------- ---------U
Syne.spec.-1.   CCGUU-a--- ---------- ---------- ---------- ---------A GGAu------ ---------u
Syne.spec.-2.   CCGUU-aa-- ---------- ---------- ---------- --------UA CG-------- ---------c
Syne.spec.-3.   uGaCC-ca-- ---------- ---------- ---------- --------UG G--------- ---------G
Syne.spec.-4.   uGaCU-ca-- ---------- ---------- ---------- --------UG G--------- ---------G
Proc.mari.-2.   uGaCC-ca-- ---------- ---------- ---------- --------UG G--------- ---------G
Proc.mari.-1.   uGaUC-ca-- ---------- ---------- ---------- --------aG G--------- ---------A
Syne.spec.-5.   ugacc-ca-- ---------- ---------- ---------- --------UG G--------- ---------G
Syne.spec.-6.   ugacc-ca-- ---------- ---------- ---------- --------UG G--------- ---------G
Cyan.para.cy.   -----ccUGc uU-------- ---------- ---------- ---------- ---------- ---------A
Porp.purp.cl.   ----agUUGc Uc-------- ---------- ---uu----- ---------- ---------- ---------A
Odon.sine.cl.   ---UU-UAUA Acu------- -------AGA Cuuuu----- ---GUCUuuu ---------- ---------U
Pavl.luth.cl.pa.-acaa-GaaU aa-------- ---------- ---------- ---------- ---------- ----------
Boli.spec.pl.   AcUU--UaUG GA-------- ---------- ---------- --------ca ---------- ---------U
Guil.thet.cl.   AGUU--UaCU AA-------- ---------- ---------- --------ga U--------- ---------U
Thal.weis.cl.   UuUUC--UCU AG-------- ---------- ---------- ---------- u--------- ---------U
Meso.viri.cl.   UGUUau---- ---------- -------aaa acaaauuaaa uaauaguuUU UGuuucuuu- a--------C
Recl.amer.mt.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fibb.succ.      CCCAU-CG-- ---------- ---------- ---------- --------GG AUGuac---- ---------G
Trep.dent.      CUCCG-AG-- ---------- ---------- ---------- --------CG GGG------- c--------a
Trep.pall.      CUCUG-AG-- ---------- ---------- ---------- --------CG AAC-----a- u--------A
Borr.burg.      CUUUG-AGGU ---------- ---------- ---------- --------UC AcU----ua- u--------A
Rhod.palu.      AACGG--G-- ---------- ---------- ---------- --------UU AAG------- ----------
Magn.magn.-1.   A-GCG-GG-- ---------- ---------- ---------- ---------U AGc------- ----------
Magn.magn.-2.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhod.rubr.      ---------- ---------- ---------- ---------- ---------- ---------- ----------
Meth.exto.pa.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Brad.japo.      AACGG--G-- ---------- ---------- ---------- --------UU AAG------- ----------
Meso.loti.      AGGGG----- ---------- ---------- ---------- --------UU cGca------ ----------
Bruc.meli.      UAGGG----- ---------- ---------- ---------- --------UU aGcc------ ----------
Sino.meli.      UcCGG--G-- ---------- ---------- ---------- ---------U aGca------ ----------
Rhiz.legu.      AGuGG----- ---------- ---------- ---------- --------UU cGca------ ----------
Agro.tume.      UACGG----- ---------- ---------- ---------- --------UU AGcc------ ----------
Caul.cres.      AGGGG----- ---------- ---------- ---------- --------UU cAGa------ ----------
Sili.pome.      UGCGC----- ---------- ---------- ---------- --------cU AGca------ ----------
Rhod.spha.      UGCGC----- ---------- ---------- ---------- --------UU AGcc------ ----------
Rick.prow.      ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rick.typh.      ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rick.cono.      ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sphi.arom.      CUGAa--G-- ---------- ---------- ---------- --------UU Acua------ ----------
Ehrl.chaf.      ---------- ---------- ---------- ---------- ---------- ---------- ----------
Wolb.spec.      AUAaC----- ---------- ---------- ---------- ---------- ---------- ----------
Chro.viol.      CAGAU-GGGC CGg------- -------GGG c----gucaa a--aCCC--- ---------- ---------U
Neis.gono.      CAAUG-GGCU GUg------- -------UGG C----gaaa- ---GCCA--- ---------- --------cc
Neis.meni.-1.   CAAUG-GGCU GUg------- -------UGG C----gaaa- ---GCCA--- ---------- --------cc
Neis.meni.-2.   CAAUG-GGCU GUg------- -------UGG C----gaaa- ---GCCA--- ---------- --------cc
Uncu.u02-.      CGAUG-GGCU GGg------- -------CAG Gg---ucaa- --aCCUG--- ---------- --------ca
Nitr.euro.      CUCaa-CGCC GGg------- -------UCU G----gcaa- ---CAGA--- ---------- --------ca
Meth.glyc.      CUCUC-ggUC GGg------- -------UGG G----guaa- ---CCCA--- ---------- --------ca
Nitr.cryo.      CUUaa-CGUC GGg------- -------UCU G----gcaa- ---CAGA--- ---------- --------ca
Uncu.u04-.pa.   CUCUC-ggCC GGg------- -------CGG A----gcaa- ---UCCG--- ---------- --------ca
Alca.faec.      CUUUG-GGUU AGg------- -------UAG G----gcaa- ---CCUA--- ---------- --------ca
Bord.para.      CCUUG-GGUC AG-------g c-gggg-GAA G----gcaa- ---CUUCcca gggggcaacc ccgaa---cc
Bord.pert.      CCUUG-GGUC AG-------g c-gggg-GAA G----gcaa- ---CUUCaca gggggcaacc ccgaa---cc
Bord.bron.am.   CCUUG-GGUC AG-------g c-gggg-GAA G----gcac- ---UUUCnca gngggcacnn ccgaa---cc
Coma.test.      UAGUG-gGCU Gg-------g caaggg-GGU A----gcaa- ---UACC--- --------uc ccgg----cU
Hydr.pall.      CGAUG-gGCU Gg-------g caaggg-GGU C----gcaa- ---GACC--- --------uc ccgg----cU
Vari.para.      CgAUG-GGCU Gg-------g caaggg-GGU Cuggagcaau ccuGACC--- --------uc ccgg----cU
Burk.pseu.      UGACG-GGCU AGu-gu--cg caagaccGGU A----gcaa- ---UACCg-- ---------- ---------a
Burk.mall.      UGACG-GGCU AGu-gu--cg caagaccGGU A----gcaa- ---UACCg-- ---------- ---------a
Burk.cepa.      UGACG-GGCU AGu-gu--cg caagaccGGU A----gcaa- ---UACCg-- ---------- ---------a
Burk.fung.      UGACG-GGCU AGa-gu--cg caagaccGGU A----gcaa- ---UACCg-- ---------- ---------a
Alca.eutr.      UGACG-GGCU AG-------- -------GGU C----gcaa- ---GACC--- ---------- --------ac
Rals.eutr.      UGACG-GGCU AG-------- -------GGU C----gcaa- ---GACC--- ---------- --------ac
Rals.meta.      UGACG-GGCU AG-------- ------gGUU C----gcaa- ---GAACc-- ---------- ---------a
Rals.sola.      CGAUA-GGCU AG-------- -------GGC C----gcaa- ---GGCC--- ---------- --------ac
Rals.pick.      UGACG-GGCU AG-------- -------GGU C----gcaa- ---GACC--- ---------- ---------a
Acid.ferr.-1.   CUGUG-GAUC CGg------- -------aGC C----gaaa- ---GGC--Gc ---------- --------gC
Acid.ferr.-2.   CUGUG-GAUC CGg------- -------aGC C----gaaa- ---GGC--Gc ---------- --------gC
Fran.tula.      UCUUu-cUUA UGac------ -------acU A----ucua- ---UAca-UC CGUu------ ----------
Dich.nodo.      CUGUG-GGUU UAc------- ---------- ---------- ---------- ---------- --------cG
Xyle.fast.-1.   CCGUG-CucG CA-------- ---------- ---------- ---------- Gc-------- ---------g
Xyle.fast.-2.   CCGUG-CucG CA-------- ---------- ---------- ---------- Gc-------- ---------g
Xyle.fast.-3.   CCGUG-CucG CA-------- ---------- ---------- ---------- Gc-------- ---------g
Xant.camp.      CCGUG-CucG UA-------- ---------- ---------- ---------- GaU------- ---------g
Xant.axon.      CCGUG-CucG UA-------- ---------- ---------- ---------- GGU------- ---------g
Legi.pneu.      CUUAU--CGG Ua-------- ---------- ---------- ------ucGA AU-------- -caacggucA
Coxi.burn.      GCCAU----- ---------- ---------- ---------- ---------- -Agcau---- ---------A
Meth.caps.      guuggggGUa ac-------- ---------- ---------- ---------c cAAuu----- ---------G
Uncu.u01a.      GUUggaAUgG GC-------- ---------- ---------- --------GU cGAcu----- ---------c
Uncu.u01b.      GuUggaAUgG GC-------- ---------- ---------- --------GU CGAcu----- ---------c
Acin.ADP1.      GUu---UAGG aA-------- ---------- ---------- --------cc CgAc------ ---------c
Micr.degr.      CCAGU-aCC- ---------- ---------- ---------- --------gc GUU------- --------aa
Pseu.aeru.      CCUGU-aAaC ---------- ---------- ---------- --------CC gaA------- ---------a
Azot.vine.      CCUGU-aAaC ---------- ---------- ---------- --------CC gaa------- ---------G
Pseu.puti.      CCUGU-aAaC ---------- ---------- ---------- --------CC gaA------- ---------c
Pseu.fluo.-1.   UCUGU-aAaC ---------- ---------- ---------- --------CC aaa------- ---------A
Pseu.fluo.-2.   UCUGU-aAaC ---------- ---------- ---------- --------CC aaa------- ---------G
Pseu.syri.-1.   CCUGU-aAaC ---------- ---------- ---------- --------CC aaa------- ---------A
Pseu.syri.-2.   CCUGU-aAaC ---------- ---------- ---------- --------CC gaa------- ---------A
Mari.hydr.      CCUAU-aaCU c--------- ---------- ---------- -------agU AGCaacauc- --------cC
Pseu.halo.      CuuGU-GgAC ---------- ---------- ---------- ---------U GGAuuu---- ---------u
Uncu.ww11.      CAAAU-GGGC g--------- ---------- ---------- ---------G UGUau----- --------aC
Shew.putr.      CACau-GGGC a--------- ---------- ---------- ---------G UGGau----- ---------U
Colw.spec.      UUaG--agga ---------- ---------- ---------- ---------- ---------- ---------u
Phot.phos.      CUUGU-AAGa ---------- ---------- ---------- --------cG GGGaaua--- --------aC
Vibr.chol.      CUUGu-AAGa ---------- ---------- ---------- --------cG GGGaaau--- --------cA
Aero.salm.      CCUGU-GucC ---------- ---------- ---------- --------UA GGGaau---- ---------c
Uncu.vlw3.      CCUGU-GucC ---------- ---------- ---------- --------UA GGGaau---- ---------c
Uncu.vlw4.      CCUGU-GucC ---------- ---------- ---------- --------UA GGGaau---- ---------c
Uncu.vls1.-3.   CCUGU-GucC ---------- ---------- ---------- --------UA GGGaau---- ---------c
Uncu.rca3.      CCUGU-GucC ---------- ---------- ---------- --------UA GGGaau---- ---------c
Uncu.vls1.-4.   CCUGU-GucC ---------- ---------- ---------- --------UA GGGaau---- ---------c
Uncu.ww-9.      CCUGU-GucC ---------- ---------- ---------- --------UA GGGaau---- ---------c
Uncu.ww10.      CCUGU-GucC ---------- ---------- ---------- --------UA GGGaau---- ---------c
Uncu.vlw5.      CCUGU-GucC ---------- ---------- ---------- --------UA GGGaau---- ---------u
Uncu.vlw6.      CCUGU-GucC ---------- ---------- ---------- --------Ua GGGaau---- ---------u
Uncu.rca4.      CCUAU-GucC ---------- ---------- ---------- --------UA GGGgau---- ---------U
Uncu.rca7.      CCUAU-GucC ---------- ---------- ---------- --------UA GGGgau---- ---------U
Uncu.rca8.      CCUAU-GucC ---------- ---------- ---------- --------UA GGGgau---- ---------U
Uncu.lem1.      CCUAU-GucC ---------- ---------- ---------- --------UA GGGgau---- ---------U
Uncu.lem2.      cUUAU-GucC ---------- ---------- ---------- --------UA Ggggau---- ---------u
Past.mult.      CUCGU-AAGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Mann.haem.      CUCGU-AAGa ---------- ---------- ---------- --------cG AGGgcaa--- ---------A
Haem.somn.      CUCGU-AAGa ---------- ---------- ---------- --------cG GGGauaa--- ---------A
Haem.infl.      CUCGU-AAGa ---------- ---------- ---------- --------cG GGGauaa--- ---------C
Haem.ducr.      CUCGU-AAGa ---------- ---------- ---------- --------cG GGGagca--- ---------C
Acti.pleu.      CUCGU-AAGa ---------- ---------- ---------- --------cG AGGgcaa--- ---------C
Acti.acti.      CUCGU-AAGa ---------- ---------- ---------- --------cG GGGauaa--- ---------A
Buch.aphi.      CUCUU-GAGa a--------- ---------- ---------- --------cG AGAaauuu-- ------uuaa
Buch.APS-.      CUCUU-AGGA ---------- ---------- ---------- --------UG AGAaaac--- ---------A
Esch.coli.-1.   CUCUU-AGGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Esch.coli.-2.   CUCUU-AGGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Esch.coli.-3.   CUCUU-AGGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Prov.rett.      CUCUU-GGa- ---------- ---------- ---------- --------cG GGGauca--- ---------A
Salm.typh.-1.   CUCUU-AGGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Salm.typh.-2.   CUCUU-AGGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Salm.ente.-1.   CUCUU-AGGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Salm.ente.-2.   CUCUU-AAGa ---------- ---------- ---------- --------cG GGGauca--- --------aA
Shig.flex.      CUCUU-AGGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Shig.dyse.      CUCUU-AGGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Salm.para.      CUCUU-AGGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Erwi.caro.      CUCUU-AGGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Erwi.chry.      CUCUU-AGGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Kleb.pneu.      CUCUU-AAga ---------- ---------- ---------- --------cG GGGaucaa-- ---------A
Uncu.rca1.      CUCUU-AAGa ---------- ---------- ---------- --------cG GGGauaa--- ---------A
Uncu.vls1.-1.   UUCUU-AAGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Uncu.vls3.      UUCUU-AAGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Uncu.vls4.      UUCUU-AAGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Uncu.ww-1.      CUCUU-AAGa ---------- ---------- ---------- --------cG GGGauaa--- ---------A
Uncu.rca2.      CUCUU-AAGa ---------- ---------- ---------- --------cG GGGauaa--- ---------A
Uncu.ww-2.      CUCUU-AAGa ---------- ---------- ---------- --------cG GGGauaa--- ---------A
Uncu.ww-3.      CUCUU-AAGa ---------- ---------- ---------- --------cG GGGauaa--- ---------a
Uncu.ql-1.      CUCUU-AAGa ---------- ---------- ---------- --------cG GGGauaa--- ---------A
Uncu.ww-4.      CUCUU-AAGa ---------- ---------- ---------- --------cG GGGauaa--- ---------A
Uncu.vls1.-2.pa.---------- ---------- ---------- ---------- ---------- ---------- ----------
Uncu.vls5.      CUCUU-AGGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Uncu.fs-1.      CUCUU-AGGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Uncu.vls6.      CUCUU-AAGa ---------- ---------- ---------- --------cG GGGaucaa-- ---------A
Uncu.fs-2.      CUCUU-AAGa ---------- ---------- ---------- --------cG GGGaucaa-- ---------A
Uncu.ww-5.      CUCUU-AAGa ---------- ---------- ---------- --------cG GGGaucaa-- ---------A
Uncu.ww-6.      CUCUU-AAGa ---------- ---------- ---------- --------cG GGGaucaa-- ---------A
Uncu.vlw1.      CUCUU-AAGa ---------- ---------- ---------- --------cG GGGaucaa-- ---------A
Uncu.vls7.      CUCUU-AAGa ---------- ---------- ---------- --------cG GGGaucaa-- ---------A
Uncu.vls8.      CUCUU-AGGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Uncu.vls9.      CUCUU-AGGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Uncu.vlw2.      CUCUU-AGGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Uncu.ww-7.      CUCUU-AAGa ---------- ---------- ---------- --------cG GGGaauaa-- ---------A
Uncu.ww-8.      CUCUU-AAGa ---------- ---------- ---------- --------cG GGGaucaa-- ---------A
Yers.ente.      CUCUU-AGGa ---------- ---------- ---------- --------cG GGGauca--- ---------A
Yers.pest.      CUCUU-AGGa ---------- ---------- ---------- --------cG GGgauca--- ---------A
Desu.vulg.      CUGAU-agaC c--------- ---------- ---------- ---------- GGU------- ----------
Desu.desu.      CUGAU-aacC c--------- ---------- ---------- --------UG aU-------- ----------
Geob.sulf.      CCAC--GGGU ---------- ---------- ---------- ---------g aAGa------ ---------U
Geob.meta.      CCAC--GGGU ---------- ---------- ---------- ---------g aaGa------ ---------U
Heli.pylo.      CUAGC-GUUU ---------- ---------- ---------- --------UA AUC------- ---------G
Camp.jeju.      CUAUC-UaG- ---------- ---------- ---------- --------CU UAA------- ---------u
Fuso.nucl.-1.   CAaag-GuG- ---------- ---------- ---------- ---------U UGacua---- ---------G
Fuso.nucl.-2.   CAaag-GuG- ---------- ---------- ---------- ---------U UGacua---- ---------G
Fuso.nucl.-3.   CAaag-GuG- ---------- ---------- ---------- ---------U UGacua---- ---------G
Stre.coel.      UUCCC-Ga-- ---------- ---------- ---------- --------CC CGGau----- ---------c
Ther.fusc.      UCUCC-Ga-- ---------- ---------- ---------- --------CC CAGug----- ---------u
Trop.whip.      UCUUC-GG-- ---------- ---------- ---------- --------CC CUGua----- ---------u
Myco.lepr.      CCCUC-GU-- ---------- ---------- ---------- --------CC CGGag----- ---------c
Myco.aviu.      CCCUC-Gg-- ---------- ---------- ---------- --------CC CGGac----- ---------c
Myco.tube.      CCCUC-Gg-- ---------- ---------- ---------- --------CC CGGac----- ---------c
Myco.bovi.      CCCUC-Gg-- ---------- ---------- ---------- --------CC CGGac----- ---------c
Myco.mari.      CCCUC-Gc-- ---------- ---------- ---------- --------CC CGGac----- ---------c
Myco.smeg.      CCCUC-Gg-- ---------- ---------- ---------- --------CC CGGau----- ---------c
Cory.diph.      UCUCU-GG-- ---------- ---------- ---------- --------UU UAGug----- ---------u
Cory.glut.      UCCCU-ga-- ---------- ---------- ---------- --------CC UAGau----- ---------c
Desu.hafn.      UCaCUaUC-A CG-------- ---------- ---------- ---------g aau------- ---------C
Deha.ethe.      UgCCg-uUUc cc-------- ---------- ---------- --------Ca aCG------- --------cC
Heli.mobi.      CUCUCgguGA GGau------ ---------- ---------- ---------- ---------- --------gu
Baci.halo.      CCCAU-GUGG uAg------- ---------- ---------- ---------- ---------- --------gu
Baci.stea.      CgUGgcG--- ---------- ---------- ---------- ---------- ---------- --------uU
Baci.mega.      CCCAU-GUGG uAg------- ---------- ---------- ---------- ---------- --------gG
Baci.subt.      CCUAU-GUGU Cu-------- ---------- ---------- ---------- ---------- --------gu
Stap.sapr.      CCUAU-GUAC CG-------- ---------- ---------- --------UU ---------- ---------a
Stap.epid.      CCUAC-GUGC UG-------- ---------- ---------- --------UU ---------- ---------a
Stap.aure.-1.   CCUAU-GUGC UG-------- ---------- ---------- --------UU ---------- ---------a
Stap.aure.-2.   CCUAU-GUGC UG-------- ---------- ---------- --------UU ---------- ---------a
Stap.aure.-3.   CCUAU-AUGC UG-------- ---------- ---------- --------UU ---------- ---------a
Stap.aure.-4.   CCUAU-GUGC UG-------- ---------- ---------- --------UU ---------- ---------a
Stap.aure.-5.   CCUAU-AUGC UG-------- ---------- ---------- --------UU ---------- ---------a
Stap.xylo.      CCUAU-GUAC CG-------- ---------- ---------- --------UU ---------- ---------a
Baci.anth.      UCCAU-GUGG u--------- ---------- ---------- --------AG GGu------- ---------a
List.inno.      CCCAU-GUGC u--------- ---------- ---------- --------AC GGu------- ---------a
List.mono.      CCCAU-GUGC u--------- ---------- ---------- --------AC GGu------- ---------a
List.gray.-1.   CCCAU-GUGC u--------- ---------- ---------- --------AC GGu------- ---------a
List.gray.-2.   CCCAU-GUGC u--------- ---------- ---------- --------AC GGu------- ---------a
List.ivan.      CCCAU-GUGC u--------- ---------- ---------- --------AC GGu------- ---------a
List.seel.      CCCAU-GUGC u--------- ---------- ---------- --------AC GGa------- ---------a
List.wels.      CCCAU-GUGC u--------- ---------- ---------- --------AC GGu------- ---------a
Leuc.mese.      CUGGC-GuCU ---------- ---------- ---------- --------GA GG-------- ----------
Leuc.pseu.      CUGAC-GuCU ---------- ---------- ---------- --------GA GA-------- ----------
Leuc.lact.      CUGGC-guCU ---------- ---------- ---------- --------AA GG-------- ----------
Lact.delb.      CCCAU-GUGc ---------- ---------- ---------- --------UC GAGua----- ----------
Lact.gass.      CUCGU-GUCU G--------- ---------- ---------- --------UC ug-------- ----------
Lact.sake.      CCCAA-GGGU U--------- ---------- ---------- --------AG Auc------- ----------
Lact.helv.      CUCGU-GGCU G--------- ---------- ---------- --------AC Ac-------- ----------
Lact.gall.      CUCGU-GGCU G--------- ---------- ---------- --------AC Ac-------- ----------
Lact.plan.-1.   UCCAU-GUUC U--------- ---------- ---------- --------GG a--------- --------uc
Carn.pisc.pa.   CCCAU-GUGC U--------- ---------- ---------- -------cGg g--------- --------ua
Ente.faec.-1.   CCCAU-GUGC U--------- ---------- ---------- -------cGG G--------- --------uc
Ente.faec.-2.   CCCAU-GUGC U--------- ---------- ---------- -------cGA G--------- --------ua
Ente.dura.      CCCAU-GUGC U--------- ---------- ---------- -------cGA G--------- --------ua
Oeno.oeni.      UCCAC-GGCA A--------- ---------- ---------- -------cau ---------- --------uc
Lact.lact.-1.   CUGAU-GGCA A--------- ---------- ---------- --------uu ---------- --------ug
Lact.lact.-2.   CUGAU-GGCA A--------- ---------- ---------- --------uu ---------- --------ug
Lact.lact.-3.   CUGAU-GGCA A--------- ---------- ---------- --------uu ---------- --------ug
Lact.lact.-4.   CUGAU-GGCA A--------- ---------- ---------- --------cu ---------- --------ug
Lact.garv.      CCGAU-GGCG G--------- ---------- ---------- --------Cc ---------- --------ug
Lact.plan.-2.   CCUAU-GACG A--------- ---------- ---------- --------uu ---------- --------ug
Pedi.pent.      UCCAUgGGCU AGa------- ---------- ---------- ---------- ---------- -------uaC
Lact.raff.      CCUAU-GGCG A--------- ---------- ---------- --------uu ---------- --------ug
Stre.equi.      CUUGU-GUCU UA-------- ---------- ---------- --------Uu ---------- ---------A
Stre.uber.      CUUGU-GUCc UG-------- ---------- ---------- --------Au ---------- ---------A
Stre.pyog.      CUUGU-GUCc UG-------- ---------- ---------- --------Uu ---------- ---------A
Stre.suis.pa.   CUUGU-GUUU GC-------- ---------- ---------- -------uG- ---------- ---------A
Stre.ther.      CUUAU-GUUU GU-------- ---------- ---------- -------uU- ---------- ---------A
Stre.gord.      CUUGU-GUCU GA-------- ---------- ---------- -------uG- ---------- ---------a
Stre.miti.      CUCGU-GUUC AA-------- ---------- ---------- -------uG- ---------- ---------a
Stre.pneu.      CUCGU-GUUC AA-------- ---------- ---------- -------uG- ---------- ---------a
Stre.muta.      CUUGU-GUUU GU-------- ---------- ---------- --------Ug ---------- ---------A
Myco.capr.      UAAGC--UUU aU-------- ---------- ---------- ---------- ---------- ---------U
Urea.urea.      GUUg--GUUu Uugggc---- ---------- ---------- --------UU auu------- ---------u
Spir.kunk.      AGAUU-AUUA AC-------- ---------- ---------- --------UA ---------- ---------U
Myco.geni.      UCAUA-GUUU GC-------- ---------- ---------- ---------- ---------- ---------U
Myco.pneu.      CCAUA-GUUU GG-------- ---------- ---------- ---------- ---------- ---------U
Myco.pulm.      CAgcUaGuuG Cucca----- ---------- ---------- --------UU Auau------ ---------G
Clos.ther.      cUGGCguCaU UAaguc---- ---------- ---------- --------AG GC-------- ----------
Ther.teng.      ugggcgUCa- AAaga----- ---------- ---------- --------GU GgG------- ----------
Clos.perf.      CCCACgGUUG AGag------ ---------- ---------- --------ua ---------- ---------a
Clos.botu.      CCCACgaCUU AGg------- ---------- ---------- --------gu cu-------- ----------
Clos.diff.      CCUGCcGACU AA-------- ---------- ---------- --------GA cu-------- ----------
Clos.acet.-1.pa.---------- --a------- ---------- ---------- --------au cu-------- ----------
Clos.acet.-2.   CCCGCgaCUC AGa------- ---------- ---------- --------gu CU-------- ----------
Rumi.albu.      ccCGG--GCU ggg------- ---------- ---------- --------UU Aaagcg---- --------uu
Carb.hydr.      CCCGG-GGCU UC-------- ---------- ---------- --------UG UCG------- ----------
support         SSSSS-SSS- SS-------- -------SSS S--------- ---SSSS--S SSS------- ----------

                ....|....| ....|....| ....|....| ....|....| ....|....| ....|....| ....|....|
                   425        435        445        455        465        475        485    
p-pre           kkkkkk---- ---------n nnnnn----- ----pppppp p-----ppp- -pppp----- -----qqqqq
psknts          )))))))))) )))))))))) )))))----- ---------- ---------- ---------- -----(((((
hel-10          ---------- ---------- ---------- ----111111 1-----111- -1111----- ----------
hel-1           666666---- ---------7 77777----- ----777777 7-----777- -7777----- -----88888
hel-x           aaaaaa---- ---------- ---------- ---------- ---------- ---------- -----aaaaa
Aqui.aeol.      aGGGCGucag -----agacA CCCGCuc--- ---------- ---------- ---------- ----gGGCUA
Ther.mari.      AGGGCGugag -----agauc CAGCCua--- ---------- ---------- ---------- -----CCGAU
Chlo.aura.-1.   uCGGGUgcu- ---------C CgGUA----- ---------- ---------- ---------- ---acgccug
Chlo.aura.-2.pa.uCGGGUgcu- ---------C CgGUA----- ---------- ---------- ---------- ---acgccug
Ther.ther.      GCGGGGacac ------aaaC CCGGCua--- ---------- ---------- ---------- -----GCCCG
Dein.radi.      UCacUAaa-- ------aaaG AAGGCua--- ---------- ---------- ---------- -----GCCca
Porp.ging.      GUGcUG---- ----acaaaU CGGGAacc-- ---------- ---------- ---------- -----GCUA-
Bact.frag.      GUGcaG---- ----uuacaU CGGGGaua-- ---------- ---------- ---------- -----GUCA-
Bact.fors.      GUGcaGa--- -----aaugU CGGAGaua-- ---------- ---------- ---------- -----GCUUG
Tann.fors.      GUGcaGa--- -----aaugU CGGAGaua-- ---------- ---------- ---------- -----GCUUG
Prev.inte.      GUGcaGg--- ----uuaaaU CGGAAaua-- ---------- ---------- ---------- -----GUUUG
Cyto.hutc.      AGAUGUcgaa cagca-ggac UAGGGga--- ---------- ---------- ---------- -----GUac-
Chlo.tepi.      GGUuCGcg-- -------caa gUaagc---- ---------- ---------- ---------- -----UCCGU
Chla.psit.      CACCGuca-- -----ucuaU CUGGUug--- ---------- ---------- ---------- -----GAAUc
Chla.pneu.      UACCGuca-- -----uuuaU CUGGUug--- ---------- ---------- ---------- -----GAACu
Chla.abor.      uACCGuca-- -----ucuaU CUGGUug--- ---------- ---------- ---------- -----GAAUc
Chla.trac.      CACCGuca-- -----uguaU CUGGUua--- ---------- ---------- ---------- -----GAACU
Chla.muri.      CGCCGuca-- -----uuuaU CUGGUua--- ---------- ---------- ---------- -----GAAUU
Osci.spec.      AcAGACaaac -----ccucA ACGGAugcu- ---------- ---------- ---------- -----CUAGU
Anab.spec.      GAAGACcaac -----ccccA ACGGAugcu- ---------- ---------- ---------- -----CUAGC
Chro.spec.      AAAA-Cgaaa -----ccccA ACGGAugca- ---------- ---------- ---------- -----cCuuU
Nost.punc.      GAAGACcaaa -----ccccA ACGGAugcu- ---------- ---------- ---------- -----CUAGU
Frem.dipl.      AGAGACcaa- -----ccccA ACGGAugcu- ---------- ---------- ---------- -----CUAGC
Plec.bory.      GUAAGCacaa -----ccccA ACGGUugcu- ---------- ---------- ---------- -----CUAGA
Tric.eryt.      GCAGACuuaa -----ccccA ACGGAugcu- ---------- ---------- ---------- -----CUAGC
Syne.spec.-1.   AGAGGUuaa- -----ccccA ACGGAugcu- ---------- ---------- ---------- -----UUGUU
Syne.spec.-2.   CUAGACuuaa ac---ccccA ACGGAugcu- ---------- ---------- ---------- -----CGAGu
Syne.spec.-3.   GcCUGG--aa ---------G GgCccuuccc auacua---- ---------- ---------- ----------
Syne.spec.-4.   GGCUGG--aa ---------G GcCccucaaa ccacua---- ---------- ---------- ----------
Proc.mari.-2.   GGCUGc--ga ---------G GcCccuuuaa cuacua---- ---------- ---------- ----------
Proc.mari.-1.   GcCUGG-aag ---------G GcUccacca- uuacua---- ---------- ---------- ----------
Syne.spec.-5.   Gnnnnn-nnn ---------n nnnnnnnnn- nnnnnn---- ---------- ---------- ----------
Syne.spec.-6.   Gnnnnn-nnn ---------n nnnnnnnnn- nnnnnn---- ---------- ---------- ----------
Cyan.para.cy.   AUGAAU---- ---------- ---------- ---------- ---------- ---------- ----------
Porp.purp.cl.   AUAaaa---- ---------g aaaa------ ---------- ---------- ---------- ----------
Odon.sine.cl.   UAUAGU---- ------uuaG Aauaac---- ---------- ---------- ---------- ----------
Pavl.luth.cl.pa.---------- ---------- ---------- ---------- ---------- ---------- ----------
Boli.spec.pl.   UaUAAa-acu agacuuuucu AGaUc----- ---------- ---------- ---------- ----------
Guil.thet.cl.   UaUAUU---- --uacuccau AAUUa----- ---------- ---------- ---------- ----------
Thal.weis.cl.   UAUAGU---- ------uuaG AAuAaa---- ---------- ---------- ---------- ----------
Meso.viri.cl.   AAAUaAug-- ------uaga AAUAAuuuuu ---------- ---------- ---------- ----------
Recl.amer.mt.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fibb.succ.      UCCGGacg-- -----caauA UGGGAua--- ---------- ---------- ---------- -----gGGaA
Trep.dent.      uGAUUCcg-- -acgccaauC GGGGCuu--- ---------- ---------- ---------- -----gCUUU
Trep.pall.      UcGGCCcg-- -acgccaaaC GGAGCuu--- ---------- ---------- ---------- -----gCUCU
Borr.burg.      CUCUUUucg- -----acauC AAAGCuu--- ---------- ---------- ---------- -----gCUUA
Rhod.palu.      ---------- -------cuC CGUUA----- ---------- ---------- ---------- ----------
Magn.magn.-1.   ---------- -------acC GCaUA----- ---------- ---------- ---------- ----------
Magn.magn.-2.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rhod.rubr.      ---------- ---------- ---------- ---------- ---------- ---------- ----------
Meth.exto.pa.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Brad.japo.      ---------- -------cuC CGUUA----- ---------- ---------- ---------- ----------
Meso.loti.      ---------- ---------C UUCUA----- ---------- ---------- ---------- ----------
Bruc.meli.      ---------- ---------C CUUAA----- ---------- ---------- ---------- ----------
Sino.meli.      ---------- ---------C CGuAA----- ---------- ---------- ---------- ----------
Rhiz.legu.      ---------- ---------C CuCUA----- ---------- ---------- ---------- ----------
Agro.tume.      ---------- ---------C CGUAA----- ---------- ---------- ---------- ----------
Caul.cres.      ---------- ---------U CCCUA----- ---------- ---------- ---------- ----------
Sili.pome.      ---------- ---------G CGUAA----- ---------- ---------- ---------- ----------
Rhod.spha.      ---------- ---------G CGUAA----- ---------- ---------- ---------- ----------
Rick.prow.      ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rick.typh.      ---------- ---------- ---------- ---------- ---------- ---------- ----------
Rick.cono.      ---------- ---------- ---------- ---------- ---------- ---------- ----------
Sphi.arom.      ---------- --------ag UUAG------ ---------- ---------- ---------- ----------
Ehrl.chaf.      ---------- ---------- ---------- ---------- ---------- ---------- ----------
Wolb.spec.      -----uucau u--------G cUAUA----- ---------- ---------- ---------- ----------
Chro.viol.      GUAGUGucac u----cuacA UCUGCua--- ---------- ---------- ---------- -----gUGCu
Neis.gono.      GCAACGucau -----cuuaC AUUGAcug-- ---------- ---------- ---------- -----GUUUC
Neis.meni.-1.   GCAACGucau c-----uuaC AUUGAcug-- ---------- ---------- ---------- -----GUUUC
Neis.meni.-2.   GCAACGucau c-----uuaC AUUGAcug-- ---------- ---------- ---------- -----GUUUC
Uncu.u02-.      GUGGGAucau c-----gcaC AUCGGauc-- ---------- ---------- ---------- -------GCU
Nitr.euro.      GUGGAGucau ------uaac -GAGGauc-- ---------- ---------- ---------- -------GCG
Meth.glyc.      GCAGCGucau ------uaaG AGAGGa---- ---------- ---------- ---------- -----UcGUG
Nitr.cryo.      GCAGAGucau ------uagc -AAGGa---- ---------- ---------- ---------- -----UcGCG
Uncu.u04-.pa.   GCAGCGucau ------auaG AGAGGa---- ---------- ---------- ---------- -----ucgu-
Alca.faec.      GCAGUGuuau ------uuaC AAAGAa---- ---------- ---------- ---------- -----UcGAA
Bord.para.      GCAGCagcga ca---uucaC AAGGAa---- ---------- ---------- ---------- -----UcGGC
Bord.pert.      GCAGCagcga ca---uucaC AAGGAa---- ---------- ---------- ---------- -----UcGGC
Bord.bron.am.   GCAGCagcga ca---uucaC AAGGAa---- ---------- ---------- ---------- -----UcGGC
Coma.test.      GCAAGGgaa- -----uuuuC AUUAG----- ---------- ---------- ---------- -----CUgGC
Hydr.pall.      GCAAGGuaa- -----uuuaC AUCGG----- ---------- ---------- ---------- -----CUgGU
Vari.para.      GCAAGGaua- -----acuaC AUgGG----- ---------- ---------- ---------- -----CUgGC
Burk.pseu.      CAGAGGuca- -----uauaC GUCAGuua-- ---------- ---------- ---------- ----aG-CCU
Burk.mall.      CAGAGGuca- -----uauaC GUCAGuua-- ---------- ---------- ---------- ----aG-CCU
Burk.cepa.      CAGAGGuca- -----uuuaC GUCAGuua-- ---------- ---------- ---------- ----aG-CCC
Burk.fung.      CAGAGGuca- -----uauaC GUCAGuua-- ---------- ---------- ---------- ----aG-CCU
Alca.eutr.      GCGAGGuau- ------uuaC GUCAGaua-- ---------- ---------- ---------- ----aG-CUC
Rals.eutr.      GCGAGGuca- -----uuuaC GUCAGaua-- ---------- ---------- ---------- ----aG-CUC
Rals.meta.      GCGAGGuca- -----uuuaC GUCAGaua-- ---------- ---------- ---------- ----aG-CUU
Rals.sola.      GCGAGGuca- -----uucaU AUCGGauc-- ---------- ---------- ---------- -----GCUUC
Rals.pick.      GCGAGGuca- -----uuuaC GUCAGaua-- ---------- ---------- ---------- ----aG-CUU
Acid.ferr.-1.   GGAGGGucau -----gaaaC ACGGAauc-- ---------- ---------- ---------- -----GUGCG
Acid.ferr.-2.   GGAGGGucau -----gaaaC ACGGAauc-- ---------- ---------- ---------- -----GUGCG
Fran.tula.      CaUAUUccg- -------cau AAGACgguc- ---------- ---------- ---------- -----U-UuG
Dich.nodo.      UAAGCGacau ------uaaC ACAGAauc-- ---------- ---------- ---------- ------GCUG
Xyle.fast.-1.   UaGaGU---- ---caucauC ACGGAa---- ---------- ---------- ---------- ----ccGCUG
Xyle.fast.-2.   UaGaGU---- ---caucauC ACGGAa---- ---------- ---------- ---------- ----ccGCUG
Xyle.fast.-3.   UaGaGU---- ---caucauC ACGGAa---- ---------- ---------- ---------- ----ccGCUG
Xant.camp.      uaGGGU---- ---cauuauC ACGGaa---- ---------- ---------- ---------- ----ccGCCG
Xant.axon.      uaGGGU---- ---cauuauC ACGGaa---- ---------- ---------- ---------- ----ccAUCG
Legi.pneu.      UAagaG---- ---------A UAAGCua--- ---------- ---------- ---------- -----GCGUC
Coxi.burn.      UAAGCuc--g cccucaagcA UGGCU----- ---------- ---------- ---------- ---caUGACU
Meth.caps.      UaaGCU---- ---------- ----C----- ---------- ---------- ---------- -----GCGCU
Uncu.u01a.      uuAUcG---- ---------- -GAUC----- ---------- ---------- ---------- -----GUGGu
Uncu.u01b.      uuAUcG---- ---------- -GcUC----- ---------- ---------- ---------- -----GCGGu
Acin.ADP1.      GuAGCG---- ---------- -cACgcac-- ---------- ---------- ---------- -----acAAG
Micr.degr.      cGACUGucac ----uuagaA CUGGauc--- ---------- ---------- ---------- ------GCaG
Pseu.aeru.      CGACUGucag ----auagaA CAGGauc--- ---------- ---------- ---------- -----GCCGc
Azot.vine.      AGACUGucag ----auagaA CAGGauc--- ---------- ---------- ---------- -----GCCGc
Pseu.puti.      UGAUUGucau ----acagaA CAGGa----- ---------- ---------- ---------- ---ucGUCGC
Pseu.fluo.-1.   UGAUUGucau ----auagaA CAGAa----- ---------- ---------- ---------- ---ucGCCGU
Pseu.fluo.-2.   UGAUUGucau ----auagaA CAGAa----- ---------- ---------- ---------- ---ucGCCGU
Pseu.syri.-1.   UGAUUGucau ----auagaA CAGGa----- ---------- ---------- ---------- ---ucGUCGC
Pseu.syri.-2.   UGAUUGucau ----auagaA CAGGa----- ---------- ---------- ---------- ---ucGUCGC
Mari.hydr.      AGGACGucau c----gcuuA UAGGCu---- ---------- ---------- ---------- -----GCUcc
Pseu.halo.      GGAGUGucac c---cuaacA CcuGAuc--- ---------- ---------- ---------- -----GCGaC
Uncu.ww11.      AGAUGGucau c---uuac-A UUUGAua--- ---------- ---------- ---------- -----GCGaG
Shew.putr.      uGAUGGucau c---ucacau cGUGCua--- ---------- ---------- ---------- -----GCGaG
Colw.spec.      cGauGGucac ----cccaaa UaGGaua--- ---------- ---------- ---------- -----GCGag
Phot.phos.      AGGGGUucaa a---cccaaA CGAGaua--- ---------- ---------- ---------- -----GCGaG
Vibr.chol.      GGAAGGucaa a---ccaaau CAAGCug--- ---------- ---------- ---------- -----GCGUg
Aero.salm.      GGAAGGucau ----ccuucA CAGGauc--- ---------- ---------- ---------- -----GUGUg
Uncu.vlw3.      GGAAGGucau ----ccuucA CAGGauc--- ---------- ---------- ---------- -----GUGUg
Uncu.vlw4.      GGAAGGucau ----ccuucA CAGGauc--- ---------- ---------- ---------- -----GUGUg
Uncu.vls1.-3.   GGAAGGucau ----ccuucA CAGGauc--- ---------- ---------- ---------- -----GUGUg
Uncu.rca3.      GGAAGGucau ----ccuucA CAGGauc--- ---------- ---------- ---------- -----GUGUg
Uncu.vls1.-4.   GGAAGGucau ----ccuucA CAGGauc--- ---------- ---------- ---------- -----GUGUg
Uncu.ww-9.      GGAAGGucau ----ccuucA CAGGauc--- ---------- ---------- ---------- -----GUGUg
Uncu.ww10.      GGAAGGucau ----ccuucA CAGGauc--- ---------- ---------- ---------- -----GUGUg
Uncu.vlw5.      GGAAGGucau ----ccuucA CAGGauc--- ---------- ---------- ---------- -----GUGUg
Uncu.vlw6.      GGAAGGucau ----ccuucA CAGGauc--- ---------- ---------- ---------- -----GUGUg
Uncu.rca4.      GGAAGGucau ----cuuucA UAGGauc--- ---------- ---------- ---------- -----GCGUg
Uncu.rca7.      GGAAGGucau ----cuuucA UAGGauc--- ---------- ---------- ---------- -----GCGUg
Uncu.rca8.      GGAAGGucau ----cuuucA UAGGauc--- ---------- ---------- ---------- -----GCGUg
Uncu.lem1.      GGAAGGucau ----cuuucA UAGGauc--- ---------- ---------- ---------- -----GCGUg
Uncu.lem2.      GaAAGGucau ----cuuucA UAGagac--- ---------- ---------- ---------- -----GCGUg
Past.mult.      GAGGAGucaa a---uucaaA CGAGauc--- ---------- ---------- ---------- -----GCGUg
Mann.haem.      GAUAAGucac ----ccaaaA CGAGauc--- ---------- ---------- ---------- -----GUGUg
Haem.somn.      GUGGAGucaa a---uccaaA CGAGauc--- ---------- ---------- ---------- -----GUGUu
Haem.infl.      GCGGAGucaa a---ccaaaA CGAGauc--- ---------- ---------- ---------- -----GUGUg
Haem.ducr.      GCGGAGucaa a---ccaaaA CGAGauc--- ---------- ---------- ---------- -----GUGUg
Acti.pleu.      GAUAAGucac ----ccaaaA CGAGauc--- ---------- ---------- ---------- -----GUGUg
Acti.acti.      GCGGAGucaa a---ccaaaA CGAGauc--- ---------- ---------- ---------- -----GUGUg
Buch.aphi.      GAAAGGccga c---auuuaA AGAGAaaa-- ---------- ---------- ---------- -----aUGUG
Buch.APS-.      GGAAGGucag a------aaA AGAGAaaa-- ---------- ---------- ---------- -----aCGUG
Esch.coli.-1.   GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Esch.coli.-2.   GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Esch.coli.-3.   GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Prov.rett.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Salm.typh.-1.   GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGCg
Salm.typh.-2.   GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGCg
Salm.ente.-1.   GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Salm.ente.-2.   GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Shig.flex.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Shig.dyse.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Salm.para.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGCg
Erwi.caro.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCgUg
Erwi.chry.      GAGAGGucaa a---ccuaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Kleb.pneu.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Uncu.rca1.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCAUg
Uncu.vls1.-1.   GAGAGGucaa a---ccuaaA AGAACuc--- ---------- ---------- ---------- -----GCGUg
Uncu.vls3.      GAGAGGucaa a---ccuaaA AGAACuc--- ---------- ---------- ---------- -----GCGUg
Uncu.vls4.      GAGAGGucaa a---ccuaaA AGAACuc--- ---------- ---------- ---------- -----GCGUg
Uncu.ww-1.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGCg
Uncu.rca2.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGCg
Uncu.ww-2.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGCg
Uncu.ww-3.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGCg
Uncu.ql-1.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGCg
Uncu.ww-4.      GAGAGGucaa a---cccaaA AGAGacc--- ---------- ---------- ---------- -----GCGCg
Uncu.vls1.-2.pa.---------- ---------- ---------- ---------- ---------- ---------- ----------
Uncu.vls5.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGCg
Uncu.fs-1.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGCg
Uncu.vls6.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Uncu.fs-2.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Uncu.ww-5.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Uncu.ww-6.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Uncu.vlw1.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Uncu.vls7.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Uncu.vls8.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Uncu.vls9.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Uncu.vlw2.      GAGAAGucaa a---cccaaA AGAGCuc--- ---------- ---------- ---------- -----GUGUg
Uncu.ww-7.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Uncu.ww-8.      GAGAGGucaa a---cccaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Yers.ente.      GAGAGGucaa a---ccuaaA AGAGauc--- ---------- ---------- ---------- -----GCGUg
Yers.pest.      GAGAGGucaa a---ccuaaA AGAGCuc--- ---------- ---------- ---------- -----GUGUg
Desu.vulg.      GagaCGuaac u------ucA UCAGGc---- ---------- ---------- ---------- ---ugGCAUC
Desu.desu.      UGG-CGacac u-------uA UCAGGc---- ---------- ---------- ---------- ---ugGCGAA
Geob.sulf.      GGAUCGuca- -----uuuua GUGGGa---- ---------- ---------- ---------- ---uaGUUgc
Geob.meta.      GGAUCGuua- -----uuuca GUGGGa---- ---------- ---------- ---------- ---uaGUCaa
Heli.pylo.      cUCCA-uaa- ---ccuuaaG CUAGAcg--- ---------- ---------- ---------- ---cuUUUAA
Camp.jeju.      UUUCGGuca- ----uuuuuG AUAGUgu--- ---------- ---------- ---------- ----aGCCUU
Fuso.nucl.-1.   UAuAGauca- -----ccaua aaUGAuuuc- ---------- ---------- ---------- ----uCUAag
Fuso.nucl.-2.   UAuAGauua- -----ccaua aaUGAuuuc- ---------- ---------- ---------- ----uCUAag
Fuso.nucl.-3.   UAuAGauua- -----ccgua aaUGAuuuc- ---------- ---------- ---------- ----uCUAag
Stre.coel.      CUGGCAuca- -----gcuaG GGGACua--- ---------- ---------- ---------- ---aaCCUUg
Ther.fusc.      CCGGCAucg- -----uugaG GAGACuu--- ---------- ---------- ---------- ----gCCGGU
Trop.whip.      CCGGCAugg- ----uuuuaG AGGACuu--- ---------- ---------- ---------- ----gCCGcG
Myco.lepr.      CUGGCAuca- -----gcuaG AGGGauc--- ---------- ---------- ---------- ---uaCCGAU
Myco.aviu.      CUGGCAuca- -----gcuaG AGGGauc--- ---------- ---------- ---------- ---caCCGAu
Myco.tube.      CUGGCAuca- -----gcuaG AGGGauc--- ---------- ---------- ---------- ---caCCGAu
Myco.bovi.      CUGGCAuca- -----gcuaG AGGGauc--- ---------- ---------- ---------- ---caCCGAu
Myco.mari.      CCGGCAuca- -----gcuaG AGGGauc--- ---------- ---------- ---------- ---aaCCGAU
Myco.smeg.      CUGGCAuca- -----gcuaG AGGGacc--- ---------- ---------- ---------- ---caCCCAC
Cory.diph.      CUGGCAucg- -----auuaA GAGACuu--- ---------- ---------- ---------- ----gCUGGU
Cory.glut.      CUGGCAucg- -----acuaA GGGACuu--- ---------- ---------- ---------- ----gCUGUU
Desu.hafn.      gcCGGG---- ---------A GcGGC----- ---------- ---------- ---------- ----------
Deha.ethe.      gaUGAG---- ---------g GGgAC----- ---------- ---------- ---------- ----------
Heli.mobi.      AAGGGGuca- ----uuuaaG AGAGC----- ---------- ---------- ---------- ---ugGCUUc
Baci.halo.      GuCGGGacuc ac--uuuuaG UGGGCua--- ---------- ---------- ---------- ---cgCCUcU
Baci.stea.      cGaGGGgcuc au--augaag CGgGCua--- ---------- ---------- ---------- ---cgCCCaa
Baci.mega.      uaAGGGacuc ac--uuuaaG UGGGCua--- ---------- ---------- ---------- ---cgCCgga
Baci.subt.      GAAGAGcaca uc----caaG UAGGCua--- ---------- ---------- ---------- ---cgCUUGC
Stap.sapr.      AcGCGAuuca ac--cuauaG UAGGAua--- ---------- ---------- ---------- ---cgCUAGG
Stap.epid.      AcGCcAuuca ac---ccaaG UAGGAua--- ---------- ---------- ---------- ---ugCUAAA
Stap.aure.-1.   AcGCGAuuca ac---cuuaA UAGGAua--- ---------- ---------- ---------- ---ugCUAAA
Stap.aure.-2.   AcGCGAuuca ac---cuuaA UAGGAua--- ---------- ---------- ---------- ---ugCUAAA
Stap.aure.-3.   AcGCGAuuca ac---cuuaA UAGGAua--- ---------- ---------- ---------- ---ugCUAAA
Stap.aure.-4.   AcGCGAuuca ac---cuuaA UAGGAua--- ---------- ---------- ---------- ---ugCUAAA
Stap.aure.-5.   AcGCGAuuca ac---cuuaA UAGGAua--- ---------- ---------- ---------- ---ugCUAAA
Stap.xylo.      AcGCGAuuca ac--cuauaG UAGGAua--- ---------- ---------- ---------- ---cgCUAGG
Baci.anth.      AGGGAC-uca aa---cuaaG UGGACua--- ---------- ---------- ---------- ---cgCCgga
List.inno.      AGGGUC-uca cu---cuaaG UGGGCua--- ---------- ---------- ---------- ---caCUAgU
List.mono.      AGGGUC-uca cu---cuaaG UGGGCua--- ---------- ---------- ---------- ---caCUAgU
List.gray.-1.   AGGGUC-uca cu---cuaaG UGGGCua--- ---------- ---------- ---------- ---caCUAgU
List.gray.-2.   AGGGUC-uca cu--uuuaaG UGGGUua--- ---------- ---------- ---------- ---cgCUgGc
List.ivan.      AGGGUC-uca cu---uuaaG UGGGCua--- ---------- ---------- ---------- ---caCUAAa
List.seel.      AGGGUC-uca cu---uuaaG UGGGCua--- ---------- ---------- ---------- ---caCUAAa
List.wels.      AGGGUC-uca cu---cuaaG UGGGCua--- ---------- ---------- ---------- ---caCUGGC
Leuc.mese.      UUAGGCcaua aa-----agG CCAGauc--- ---------- ---------- ---------- ---guAcUGC
Leuc.pseu.      UUAGGCcaua aa-----agG UCAGAuc--- ---------- ---------- ---------- ---gcAuUGU
Leuc.lact.      UUAGGUcaua aa-----aaG UCAGauc--- ---------- ---------- ---------- ---gcGuCGU
Lact.delb.      AGGGUCucaa auu----uaG UGGGaua--- ---------- ---------- ---------- ---cgUUAAA
Lact.gass.      cGGGUCuuac cauu---uaA CGAGCua--- ---------- ---------- ---------- ---cgUUUAA
Lact.sake.      CGGGUCucaa auu----aaU UGGGUua--- ---------- ---------- ---------- ---cgUUAAA
Lact.helv.      uGAGUAucaa cuu----uaG CGAGUua--- ---------- ---------- ---------- ---cgUUUAA
Lact.gall.      uGAGUAucaa cuu----uaA CGAGUua--- ---------- ---------- ---------- ---cgUUUAA
Lact.plan.-1.   uGGGUCcuaa auu----uaG UGGACuua-- ---------- ---------- ---------- ---cgCUCaa
Carn.pisc.pa.   aggguccuau aa----uaaG UGGGaua--- ---------- ---------- ---------- ---cgCUAAA
Ente.faec.-1.   AGGGUCcuaa uc----gaaG UGGGaua--- ---------- ---------- ---------- ---cgCUAAA
Ente.faec.-2.   AGGGUCcuaa cu----uuaG UGGGaua--- ---------- ---------- ---------- ---cgUUUCA
Ente.dura.      AGGGUCucaa au----uuaG UGGGaua--- ---------- ---------- ---------- ---cgUUAAA
Oeno.oeni.      ucGGCcuaau u-------aG UGGAUua--- ---------- ---------- ---------- ---gcUGCUG
Lact.lact.-1.   acGGCcuaaa cu---uuuaG UCAGaua--- ---------- ---------- ---------- ---cgUUGU-
Lact.lact.-2.   acGGCcuaaa cu---uuuaG UCAGAua--- ---------- ---------- ---------- ---cgUUGU-
Lact.lact.-3.   acGGCcuaaa cu---uuuaG UCAGaua--- ---------- ---------- ---------- ---cgUUGU-
Lact.lact.-4.   acGGCcuaaa cu---uuuaG UCAGaua--- ---------- ---------- ---------- ---cgUUGU-
Lact.garv.      aAGCUcuaaa cc----ucaG UCGGaua--- ---------- ---------- ---------- ---cgUUUU-
Lact.plan.-2.   aUGGCcuaau u------uaG UAGGaua--- ---------- ---------- ---------- ---cgCUUU-
Pedi.pent.      GGGUCcuaaa ug-----aaG UGGACuug-- ---------- ---------- ---------- ---cgCUUAa
Lact.raff.      auGGCcuaau u------uaG UAGGaua--- ---------- ---------- ---------- ---cgaUUU-
Stre.equi.      GAGGUCucaa aa-----caG CAAGCua--- ---------- ---------- ---------- ---cgUUUAG
Stre.uber.      GAAGUCucaa aa----acaG CAAGCua--- ---------- ---------- ---------- ---cgACUAA
Stre.pyog.      GAAGUCucaa aa-----uaG CAAGCua--- ---------- ---------- ---------- ---cgGUUAC
Stre.suis.pa.   UUGGUCuuaa aa-----uaG CAAGCua--- ---------- ---------- ---------- ---cgUUGGG
Stre.ther.      GAAGUUuuau ug---auuuA UAAGCua--- ---------- ---------- ---------- ---cgUUCGA
Stre.gord.      CaGGUCuuau ua----uuaG CAAGCua--- ---------- ---------- ---------- ---cgGUAGA
Stre.miti.      CaGGUCuuau ua----uuaG CGAGaua--- ---------- ---------- ---------- ---cgAUCAA
Stre.pneu.      CaGGUCuuau ua----uuaG CGAGaua--- ---------- ---------- ---------- ---cgAUUAA
Stre.muta.      UUGGUCuuau ug----uuaA CAAGCua--- ---------- ---------- ---------- ---cgUUAGA
Myco.capr.      UAUAACcgua uuacc-caaG CUUAAua--- ---------- ---------- ---------- -----GAAUA
Urea.urea.      uacAAUaguu uuaaa-uuua aAAUUc---- ---------- ---------- ---------- -----uuAUU
Spir.kunk.      UAUcGUaucu caagu-cuuA AUCUAaua-- ---------- ---------- ---------- -----GAAAU
Myco.geni.      AGCUGUcaua ------guuU AUGACuc--- ---------- ---------- ---------- ------GAGG
Myco.pneu.      UCGUGUcaca ------guuU AUGGCuc--- ---------- ---------- ---------- ------GGGG
Myco.pulm.      uuCUGGauaa ugga----aG caUGCcua-a gaa------- ---------- ---------- -----cUUaG
Clos.ther.      cUUUUGagug ggaa----gG UUAaacucua gaa------- ---------- ---------- -----CUGUC
Ther.teng.      ---------- ---------- ---------- gaa------- ---------- ---------- -----CUGGU
Clos.perf.      GGGugucauu uaaaa----G UGGGgaa--- ---------- ---------- ---------- -----CCGag
Clos.botu.      -gGCgucgac a--------G UGGGGaa--- ---------- ---------- ---------- -----CCGag
Clos.diff.      GGACGucauu au-------G CAGGGaa--- ---------- ---------- ---------- ------CUAC
Clos.acet.-1.pa.-ggcgucgag a--------g cggggaa--- ---------- ---------- ---------- -----aCGag
Clos.acet.-2.   -GGCGucgac a--------G CGGGGaa--- ---------- ---------- ---------- -----CCGag
Rumi.albu.      GGAUaa---- ---------U UGuuGac--- ---------- ---------- -cuuc----- -gccaGCcgA
Carb.hydr.      GGGCGu-gac c-----ggaC CGGGCug--- ---------- ---------- ---------- -----GCUUA
support         SSSSSS---- ---------S SSSS------ ---------- ---------- ---------- -----SSSS-

                ....|....| ....|....| ....|....| ....|....| ....|....| ....|....| ....|....|
                   495        505        515        525        535        545        555    
p-pre           qqqqrrrrr- ---sssssss srrrrr-qqq qqqqqq---- ------ssss ssss----tt tttuuuuu--
psknts          (((((((((( ((((((-pse udoknot-II I-)))))))) )))))))))) ))))----(( ((((((((((
hel-10          ---------- ---------- ---------- ---------- ---------- --------11 11111111--
hel-1           888888888- ---9999999 988888-888 888888---- ------9999 9999----00 00000000--
hel-x           aaaabbbbb- ---------- -bbbbb-aaa aaaaaa---- ---------- --------aa aaabbbbb--
Aqui.aeol.      CU--CGGUc- ---GCACGGG --GCUG---A GUAGCUgaca cc--uaaCCC GUGC----Ua CCCUCGGG--
Ther.mari.      UCA-GcUUc- ---GCCUUCC --GGcC--UG AAUCGGgaaa ac--ucaGGA AGGCug---U GGGAGaGGa-
Chlo.aura.-1.   cCU-gAGC-- ---GUU--AU CgGCU--aAG a--------- ------GAUc aGGC-----U gGCccaacg-
Chlo.aura.-2.pa. cCU-gAGC-- ---GUU--AU CgGCU--aAG a--------- ------GAUc aGGC-----U gGCccaacg
Ther.ther.      GG--GccAc- ---GCCCUC- --UaaC---C CCGGGCgaag cu--ugaaGG GGGCuc---g CUCCUGGC--
Dein.radi.      ----GGCga- -uuCUCCAUA ---GCC---- gacGGCgaaa cu----uUAU GGAGcuacGG CCu-GCGa--
Porp.ging.      ----CAGGa- -ugCUUCC-U -gCCUG---- --UGGUcaga uc---gaAcG GAAGaua-ag GAuCGuGCa-
Bact.frag.      ----GAAGU- -ggCCUUgc- -GCUUC---- --UGAUgaaa c-----uuua AAGGaua-ag GCAGGAaUu-
Bact.fors.      a---CGgAU- --gUCCC--- -GUaCG---- gCAAGUgaaa a-----uuca GGGAaua-ag GUUGCGGUg-
Tann.fors.      a---CGgAU- --gUCCC--- -GUaCG---- gCAAGUgaaa a-----uuca GGGAaua-ag GUUGCGGUg-
Prev.inte.      G---GUA-U- --gCCUC--- -GcUGC---- CCAAAUgaaa ------uuua GAGGaua-aG GCAUUGGUu-
Cyto.hutc.      -----AAGU- --ugcGggU- -GCUUc---- ----GCgaaa ------uuAa gUaacua-aG GUUaUAGUu-
Chlo.tepi.      ACA-UUCaU- ---gCCCGA- -GgGGG--UG UGCGGGuaac c-----aaUC GGG-aua-ag GGgaCGAa--
Chla.psit.      uAC-CUUCU- cuaAUUCUCA -AGGAG--GU uuAUUCgaga u---uauUGA GAGU----CG UUGGCUUC--
Chla.pneu.      uAC-UUUCU- cuaAUUCUCA -AGGAA--GU ucGUUCgaga u---uuuUGA GAGU----CA UUGGCUgC--
Chla.abor.      uAC-CUCCU- cuaAUUCUCA -AGGGG--GU uuAUUCgaga u---uauUGA GAAU----CG UUGGUUUC--
Chla.trac.      UAg-gUCCU- uuaAUUCUCG -AGGAa--aU GAGUUUgaaa u--uuaaUGA GAGU----CG UUAGUCUC--
Chla.muri.      AGg-gCCUU- uuaACUCUCA -AGGGa--aC UAAUUUgaau u--uuaaUGA GAGU----CG UUGGUCUC--
Osci.spec.      AAg---GUu- u--CUCuGGU U-AC-----U UGCUAGuuaa ga-cucAACC uGAGu----- ----------
Anab.spec.      AAu---GUU- ---CUCUGGU UGGC-----U UGCUAGcuaa ga-uuuAAUC AGAGc----- ----------
Chro.spec.      UA----GUU- ac-UUUCGGU uGAC-----U AAuuGcguaa agacuucACC GAAAc----- ----------
Nost.punc.      AAg--cGUU- ---CUCUGGU UGGC-----U UGCUAGcuaa ga-uuaAAUC AGAGa----- ----------
Frem.dipl.      AAG--uaUU- ---CUCUGGU UGA-----CU UGCUAGcuaa ga-cuuAAUC AGAGc----- ----------
Plec.bory.      AUu-ucGCC- ----UUUGGU cGGC-----A UUCUAGcuaa ga-caauACC AAAgc----- ----------
Tric.eryt.      aau-uuuuc- ----ucuggu uaccu----- -GCUAGuuaa ga-uuuaacc agagc----- ----------
Syne.spec.-1.   ----UGGCU- cuuCUCUAGU UAGCUA---- -AACAAucaa gacucaGACU AGAGc----- ----------
Syne.spec.-2.   ----GGCGG- --cCUCAGGU -CCGUC-c-- -uCUCGcuaa g-caaaaACC UGAGc----- ----------
Syne.spec.-3.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Syne.spec.-4.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Proc.mari.-2.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Proc.mari.-1.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Syne.spec.-5.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Syne.spec.-6.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Cyan.para.cy.   ---------- ---------- ---------- ---------- -----uaaaa aaagc----- ----------
Porp.purp.cl.   ---------- ---------- ---------- ---------- ----guaaaa aaaua--caa a---------
Odon.sine.cl.   ---------- ---------- ---------- ---------- -----uuuau cauuu--caa a---------
Pavl.luth.cl.pa.---------- ---------- ---------- ---------- ---------- ---------- ----------
Boli.spec.pl.   ---------- ---------- ---------- ---------u uuuaaguuaa auuauuacuu aauuccuuu-
Guil.thet.cl.   ---------- ---------- ---------- ---------u uuuaaagaug gua------- ----------
Thal.weis.cl.   ---------- ---------- ---------- ---------- uuuaaauuuu gcaaa----- ----------
Meso.viri.cl.   ---------- ---------- ---------- ---------- uuuagcuuuu caag------ ----------
Recl.amer.mt.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fibb.succ.      GugucAUGC- ---CUGG--g GGCAU----- CUcCCg--ag auuuacUagg CUGG-ucaaa cUCCGCGC--
Trep.dent.      UUagcGGCG- ----UGUA-A ACGUU----A AAAGGg---a cuuuu-UU-U ACAc-uaaGG AUUCGacG--
Trep.pall.      UACG--UUG- ----UGCAcG GCGGa--CGU AGGGGg---a cuuuugUC-U GUGc-uaaGA CUCUGgcG--
Borr.burg.      AAAauGUUu- ----UCAAGU -uGAU---UU UUAGGg---a cuuuuauACU UGA---gaGC AAUuUGGU--
Rhod.palu.      gGCgGGGUuc ---GGAGGC- --ACCU-gGC aacagaa--- --------GC CUCCa----- ----------
Magn.magn.-1.   gGCgGGGUuc ---GGAGGU- --ACCU-gGC aacagaa--- --------AC CUCCa----- ----------
Magn.magn.-2.   -GCgCGGUcc ---GGGGGGA --ACCG-gGC aacagaac-- -------UCC CCCCa----- ----------
Rhod.rubr.      -GCgCGGUuc ---GGGGGGG c-ACCG-gGC aacagaag-- -------CCC CCCCa----- ----------
Meth.exto.pa.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Brad.japo.      gGCgGGGUuc ---GGAGGC- --ACCU-gGC aacagaa--- --------GC CUCCa----- ----------
Meso.loti.      gGCgGGGUuc ---GGAGGU- --ACCU-gGC aacagaa--- --------AC CUCCa----- ----------
Bruc.meli.      gGCgGGGUuc ---GGAGGC- --ACCU-gGC aacagaa--- --------GC CUCCa----- ----------
Sino.meli.      gGCgGGGUcc ---GAAGGC- --ACCU-gGC aacagaa--- --------GC CUUCa----- ----------
Rhiz.legu.      gGCgGGGUcc ---GAAGGC- --ACCU-gGC aacagaa--- --------GC CUUCa----- ----------
Agro.tume.      gGCgGGGUuc ---GGAGGU- --ACCU-gGC aacagaa--- --------AC CUCCa----- ----------
Caul.cres.      gGcgGGGCcc ---GGAGGGA --GCCU-gcC aacagaa--- -------UCC CUCCa----- ----------
Sili.pome.      gGCgGGGUuc ---GCAGGU- --ACCU-gGC aacagaa--- --------AC CUGCa----- ----------
Rhod.spha.      gGCgGGGUuc ---GCAGGU- --ACCU-gGC aacagaa--- --------AC CUGCa----- ----------
Rick.prow.      --CgCGGCug ---GGGAUUU --GCCG-gGc aacagaa--- -------AAA UCCCa----- ----------
Rick.typh.      --CgCGGCuu ---GGGAUUU --GCCG-gGc aacagaa--- -------AAA UCCCaug--- ----------
Rick.cono.      --CgCGGCug g-aGGGuGU- --GCCG-gGc aacagaac-- -------aAC cCUCa----- ----------
Sphi.arom.      aGCaCGGUuc g--gaCCGA- --ACCG-gGU aacagaa--- --------UC GGaaa----- ----------
Ehrl.chaf.      -GCgCGGuuu uuuuAAGGGu uuuCCG-gGC aacagaaa-- ------aaCC CUUu------ ----------
Wolb.spec.      aGCaCGGUuc a---GGGAA- -cGCCG-gGU aacagaag-- --------UU CCCca----- ----------
Chro.viol.      GUU---CCGg ---GUUACU- -UGGuu-cAG U-GCGaaau- ----aauaGG UAACuc--GC CaaaGUCca-
Neis.gono.      Ca---GCCGg ---GUUACU- -UGGC----a GGAAAU--aa ga-cuuaaGG UAACug--GU UUCCAaaA--
Neis.meni.-1.   CU---GCCGg ---GUUAUU- -UGGC----A GGAAAU--ga ga-uuuaaGG UAACug--GU UUCCAaaA--
Neis.meni.-2.   CU---aCCGg ---GUUACU- -UGGc----A GGAAAU--aa ga-cuuaaGG UAACug--GU UUCCAaaA--
Uncu.u02-.      GC--gUGCAg g--GUUGCGA -UGCAa---G UGGCuaaauc aagcgacUCG CGGUu---GU CGUa------
Nitr.euro.      UUU--UGCAg g--GUUACUU -UGCA---GA GCGCuaaaaa a-----uAGG UAACuc--GC CUGUcaUC--
Meth.glyc.      CGA--UAUUg g--GUUACUU -AAUA---UC GUAUuAaauc c-----aAGG UAACuc--GC CUGcUGUUu-
Nitr.cryo.      UUC--UGUAg g--GUCACUU -UACA---GA ACGUuAaaca a-----uAGG UGACuc--GC CUGcCAuCa-
Uncu.u04-.pa.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Alca.faec.      UCG-GuCUgc ---gCCACg- -aAGuC--CG GUUCuAaaa- ----cuua-G UGGauc--GC CaaGGAaag-
Bord.para.      CAc-CGCUGg g--gUCACa- -CGGCG--uU GGUUuAaa-- -----uuacG UGAauc--GC CCUGGuCcg-
Bord.pert.      CAc-CGCUGg g--gUCACa- -CGGCG--uU GGUUuAaa-- -----uuacG UGAauc--GC CCUGGuCcg-
Bord.bron.am.   CAc-CGCUGn g--gUCACa- -CGGCG--uU GGUUuAaa-- -----uuacG UGAauc--GC CCUGGuCcg-
Coma.test.      UGGAUACCGg ---GCUUCU- -UGGUA-UUU GGCgAGauu- -----uuaGG AAGCug--GC UACCCAAGc-
Hydr.pall.      UCUGCGUCGg ---GCAcCU- -UGGCG-CAG GAUgAGauu- -----caaGG aUGCug--GC UuCCCGuuu-
Vari.para.      UCCGAUCCGg ---GUACCU- -UGGGU-CGG GGCgAGaaa- -----auaGG GUACug--GC gUCCGGuuu-
Burk.pseu.      GU---CCGgc ---gUCACg- -aCGG----A CAGGuCgaaa ----aucaaG UGAauc--GC CGUaACGga-
Burk.mall.      GU---CCGgc ---gUCACg- -aCGG----A CAGGuCgaaa ----aucaaG UGAauc--GC CGUaACGga-
Burk.cepa.      UG---uCGgc ---gUCGCg- -aCGc----C AGGGuCgaaa ----aucuaG CGAauc--GC CGUAGUGca-
Burk.fung.      uG---GUGgu ---gUCACg- -aCAU----C cGGGuCgaaa ----aucuaG UGAauc--GC CGUAGUGca-
Alca.eutr.      CG---Gaagg ---GUCACg- -aagC----C GGGGaCgaaa ----accuaG UGACuc--GC CGuCGUAg--
Rals.eutr.      CG---Gaagg ---GUCACg- -aagC----C GGGGaCgaaa ----accuaG UGACuc--GC CGuCGUAga-
Rals.meta.      CG---GGagu ---GUCACg- -ggCC----C GAGGaCgaaa ----accuaG UGACuc--GC CGuCGUAga-
Rals.sola.      GG---CCGgu ---GUCACg- -aCGG----C CGGGGUuaac ----uccaaG UGACuc--GU CGuCGCGca-
Rals.pick.      UA---GGUga ---gUCACg- -gGCC----U AGAGaCgaaa ----acuuaG UGAauc--GC CGUCGUAga-
Acid.ferr.-1.   CAU--UCUA- ---gUCUG-- -UGGG---AU GCGCGCuaaa ---uuaaagC AGAauc--GC CaUGUCGUc-
Acid.ferr.-2.   CAU--UCUA- ---gUCUG-- -UGGG---AU GCGUGCuaaa ---uuaaagC AGAauc--GC CaUGUCGUc-
Fran.tula.      CU---UUUU- ---GUCUG-- -GGAGuuaaG GCuGuAu--- ---uuaa--C AGACuc--GC UaaCUAUU--
Dich.nodo.      GU--UAACG- --cgUCCGC- -UGUUA---A UCGGUuaaa- ---uuaa-GC GGAauc--GC UUGcAAAa--
Xyle.fast.-1.   AGacGUGGc- --cGUCUGC- --CCAUc--C UCGGUuaaau cua-----GC AGACug--GU UuCCGGGU--
Xyle.fast.-2.   AGacGUGGc- --uGUCUGC- --CCACa--C UUGGUuaaau cua-----GC AGACug--GU UuCCGGGU--
Xyle.fast.-3.   AGacGUGGc- --cGUCUGC- --CCACc--C UUGGUuaaau cua-----GC AGACug--GU UuCUGGGU--
Xant.camp.      GUa-gUGgc- --uGCCUGU- ---CAgcu-A UCGGUuagau caa-----GC AGGCug--GU UUUCAGGU--
Xant.axon.      GUa-gUGgc- --uGCCUGU- ---CAgcu-A CCGGUcagau aaa-----GC AGGCug--GU UUCCAGGU--
Legi.pneu.      c---UAAU-- -cuaUCCCgG --GUUAu--- -GGCGCgaaa -----cuCaG GGAauc--GC UGUGUaUC--
Coxi.burn.      U--------- ---------- --------ga AGGUUAaa-- -----cagaa gagcuc--GC AGUCAAUUuc
Meth.caps.      g---aaGUC- --ugUCCGg- -GGCcg---- aAGCGCuaaa ac---ccaaC GGAauc--GC CGucCGUcuu
Uncu.u01a.      g---aaGCC- --cgCCCUU- -GGCcg---- auCUGCuaaa ac--ucuaAG GGGauaa-GC GUUGGagau-
Uncu.u01b.      g---aaGCC- --cgCCCUU- -GGCcg---- auCUGCuaaa ac--ccuaAG GGGauaa-GC GUUGGagau-
Acin.ADP1.      -UCCGuaUa- ---gag-UCa A-GccUcGGG gCUUuauacc aaa-cuUaGA -ggauc--GC AUCUuGU---
Micr.degr.      ug-aaGCCU- ---gCCUG-- -GGGUgg--a uCaGCuaaac ---uuuua-C AGGauc--GC GCUUUuCG--
Pseu.aeru.      c---AaGUUc ---GCUGUA- -GACgU---- aaCGGCuaaa a---cucaUA CAGCuc--GC UCCaaGC---
Azot.vine.      c---AaGUUc ---GCUGUA- -GACgU---- aaCGGCuaaa a---cucaUA CAGCuc--GC CCAaaGC---
Pseu.puti.      gU--aGCaC- ---GUUGUG- -G-GC---gA aGUGACuaaa acu---uaCA CAACuc--Au cCaaaGc---
Pseu.fluo.-1.   gc--aGUaC- ---GUUGUG- -G-AC---ga aGCGGCuaaa acu---uaCA CAACuc--GC CCaaAGC---
Pseu.fluo.-2.   gc--aGUaC- ---GUUGUG- -G-AC---ga aGCGGCuaaa acu---uaCA CAACuc--GC CCaaAGC---
Pseu.syri.-1.   cU--aGUaC- ---GUUGUG- -G-AC---gA aGCGACuaaa acu---uaCG CAACuc--GC CCaauGC---
Pseu.syri.-2.   cU--aGUaC- ---GUUGUG- -G-AC---gA aGCGACuaaa acu---uaCA CAACuc--GC CCaaAGC---
Mari.hydr.      GuU-cACCAg a--GCUCac- -UGGU---Gu U-cGGCuaag a----uuaaa GAGCuc--GC CUCuuGC---
Pseu.halo.      gg--aAACCc u--GGCCGg- -GGUU---ga aG-CGUuaaa a---cuaagC GGCCuc--GC CUUUAucU--
Uncu.ww11.      gg---AaCUc c--GUCCGG- -GGgU---ga aC-CGCgaaa u---aguaCC GGACuc--GC CCGAugAA--
Shew.putr.      gg---AaCCc u--GUCUGG- -GGgU---ga aC-CGCgaaa c---aguaCC GGACuc--AC CGUgUGGG--
Colw.spec.      g--gaAGCac ---GCUUGA- -gGCU---ga a-cCGCgaaa u---aguaUC AAGCuca-cC auGacGaA--
Phot.phos.      gg-auUCUUu g--ACUAGA- -GAGAu--ga aC-CGCgaaa u--agaauUC UGGUau--GU AUUagCAU--
Vibr.chol.      g--auUCCCc c--ACCUGA- -GGGAu--ga a-GCGCgaga u--cuaauUC AGGUua--GC CAUUcGUU--
Aero.salm.      g---aaGUCc u--GCUCGG- -GGCg---ga a-GCAUuaaa a---ccaaUC GAGCua--GU CAAUUCGU--
Uncu.vlw3.      g---aaGUCc u--GCUCGG- -GGCg---ga a-GCAUuaaa a---ccaaUC GAGCua--GU CAAUUCGU--
Uncu.vlw4.      g---aaGUCc u--GCUCGG- -GGCg---ga a-GCAUuaaa a---ccaaUC GAGCua--GU CAAUUCGU--
Uncu.vls1.-3.   g---aaGUCc u--GCUCGG- -GGCg---ga a-GCAUuaaa a---ccaaUC GAGCua--GU CAAUUCGU--
Uncu.rca3.      g---aaGUCc u--GCUCGG- -GGCg---ga a-GCAUuaaa a---ccaaUC GAGCua--GU CAAUUCGU--
Uncu.vls1.-4.   g---aaGUCc u--GCUCGG- -GGCg---ga a-GCAUuaaa a---ccaaUC GAGCua--GU CAAUUCGU--
Uncu.ww-9.      g---aaGUCc u--GCUCGG- -GGCg---ga a-GCAUuaaa a---ccaaUC GAGCua--GU CAAUGCGU--
Uncu.ww10.      g---aaGUCc u--GCUCGG- -GGCg---ga a-GCAUuaaa a---ccaaUC GAGCua--GU CAAUGCGU--
Uncu.vlw5.      g---aaGUCc u--GCUCGG- -GGCg---ga a-GCAUuaaa a---ccaaUC GAGCua--GU -AAUGCGU--
Uncu.vlw6.      g---aaGUCc u--GCUCGG- -GGCg---ga a-GCAUuaaa a---ccauUC GAGCua--GU CAAUGCGU--
Uncu.rca4.      g---aaACCu u--GUCUGG- -GGUg---ga a-GCGUuaaa a---cuaaUC AGACua--GU UAUUCAGU--
Uncu.rca7.      g---aaACCu u--GUCUGG- -GGUg---ga a-GCGUuaaa a---cuaaUC AGACua--GU UAUUCAGU--
Uncu.rca8.      g---aaGCCu u--GUCUGG- -GGUg---ga a-GCGUuaaa a---cuaaUC AGACua--GU UAUUCAGU--
Uncu.lem1.      g---aaGCCu u--GUCUGG- -GGUg---ga a-GCGUuaaa a---cuaaUC AGACua--GU UAUUCAGU--
Uncu.lem2.      g---aaGCCc u--GUCUGG- -GGUg---ga a-GCGUcaaa a---cuaaUC AGGCaa--GU UAUgCAaU--
Past.mult.      g---acgCCu cc-GCUUGA- -GGauc--ga a-GCGUuaaa ---uugaaUC AAGCua--GU UUAUCUAU--
Mann.haem.      g---acgCCg cc-GCUUUA- -GGauc--ga a-ACACuaaa ---uuaaaUA AAGCua--GU UUAUUCAU--
Haem.somn.      g---aagCCg cc-GCUUUA- -GGauc--ga a-GCAUuaaa ---uugaaUA AAGCua--GU uuuUUGAU--
Haem.infl.      g---aAgCCa cc-GUUUGA- -GGaUc--ga a-GCACuaaa ---uugaaUC AAACua--GC UUAAGUuU--
Haem.ducr.      g---acgCUu cg-GCUUGu- -AGauc--ga a-ACACcaaa ---uugaauC AAGCua--GU UUAUUUCU--
Acti.pleu.      g---acgCCg cc-GUUUGA- -GGauc--ga a-ACACuaaa ---uugaaUC AAACua--GC UUAUUUCU--
Acti.acti.      g---aAgCCa cc-gUUUGA- -GGaUc--ga a-GCAUuaaa ---uuaaaUC AAAgua--GC UUAAUUgU--
Buch.aphi.      ag--CACUA- -u-GCUUGA- -UAGUG---- aCACAaaauu a--auuuuUC AAGCua--ua aGCUUAAa--
Buch.APS-.      g--aUAUCa- -a-GCUUGA- -cGAUA---- aCACGaagua g--uuuuuUC AAGCua--ua UACCUAAU--
Esch.coli.-1.   g---aAGCCc u--GCCUGG- -GGUU---ga a-GCGUuaaa a--cuuaaUC AGGCua--GU UUGUUAGU--
Esch.coli.-2.   g---aAGCCc u--GCCUGG- -GGUU---ga a-GCGUuaaa a--cuuaaUC AGGCua--GU UUGUUAGU--
Esch.coli.-3.   g---aAGCCc u--GCCUGG- -GGUU---ga a-GCGUuaaa a--cuuaaUC AGGCua--GU UUGUUAGU--
Prov.rett.      g---auGCCu u--gCCUGG- -GGUu---ga a-GCGUuaaa ---cuuaaUC AGGaua--GU UUGUUGGU--
Salm.typh.-1.   g---auGCCc u--GCCUGG- -GGUu---ga a-GCGUuaaa a---cgaaUC AGGCua--GU CUGGUAgU--
Salm.typh.-2.   g---auGCCc u--GCCUGG- -GGUu---ga a-GCGUuaaa a---cgaaUC AGGCua--GU CUGGUAgU--
Salm.ente.-1.   g---auGCCc u--GCCUGG- -GGUu---ga a-GCGUuaaa a---cgaaUC AGGCua--GU CUGGUAgU--
Salm.ente.-2.   g---auGCCc u--GCCUGG- -GGUu---ga a-GCGUuaaa a---cgaaUC AGGCua--GU CUGGUAgU--
Shig.flex.      g---aAGCCc u--GCCUGG- -GGUU---ga a-GCGUuaaa a--cuuaaUC AGGCua--GU UUGUUAGU--
Shig.dyse.      g---aAGCCc u--GCCUGG- -GGUU---ga a-GCGUuaaa a--cuuaaUC AGGCua--GU UUGUUAGU--
Salm.para.      g---auGCCc u--GCCUGG- -GGUu---ga g-GCGUuaaa a---cgaaUC AGGCua--GU CUGGUAgU--
Erwi.caro.      g---auGCCc u--GCCUGG- -GGUu---ga a-GgGCuaaa u---cuaaUC AGGCua--GU UUGUUAGU--
Erwi.chry.      g---auGCCc u--GCCUGG- -GGUu---ga a-GCGUuaaa u---ccaaUC AGGCua--GU UUGUUAGU--
Kleb.pneu.      g---auGCCc u--GCCUGG- -GGUu---ga a-GCGUuaaa u---cuaaUC AGGCua--GU UUGUUAGU--
Uncu.rca1.      g---aAGUCc u--GCCUGG- -GGCU---aa a-GUGCuaaa u---cuaaUC AGGCua--GU UuGUUAGU--
Uncu.vls1.-1.   a---auACCu u--GCCUGG- -GGUu---ga a-GCGCuaaa au--cuaaUC AGGCua--GU UuGUCAGU--
Uncu.vls3.      a---auACCu u--GCCUGG- -GGUu---ga a-GCGCuaaa au--cuaaUC AGGCua--GU UuGUCAGU--
Uncu.vls4.      a---auACCu u--GCCUGG- -GGUu---ga a-GCGCuaaa au--cuaaUC AGGCua--GU uuGUcaGU--
Uncu.ww-1.      g---auGUCc u--GCCUGG- -GGCu---ga a-GUGCuaaa a---cuaaUC AGGCua--GU uCGUUAGU--
Uncu.rca2.      g---auGUCc u--GCCUGG- -GGCu---ga a-GUGCuaaa a---cuaaUC AGGCua--GU uCGUUAGU--
Uncu.ww-2.      g---auGUCc u--GCCUGG- -GGCu---ga a-GUGCuaaa a---cuaaUC AGGCua--GU uCGUUAGU--
Uncu.ww-3.      g---auGUCc u--GCCUGG- -GGCu---ga a-GUGCuaaa a---cuaaUC AGGCua--GU uCGUUAGU--
Uncu.ql-1.      g---auGUCc u--GCCUGG- -GGCu---ga a-GUGCuaaa a---cuaaUC AGGCua--GU uCGUUAGU--
Uncu.ww-4.      g---auGUCc u--GCCUGG- -GGCu---ga a-GUGCuaaa a---cuaaUC AGGCua--GU uCGUUAGU--
Uncu.vls1.-2.pa.---------- ---------- ---------- ---------- ----nnnnnn nnnnnn--nn nnnnnAGU--
Uncu.vls5.      g---auGCCc u--GCCUGG- -GGUu---ga a-GCGUuaaa a---cgaaUC AGGCua--GU CUGGUAgU--
Uncu.fs-1.      g---auGCCc u--GCCUGG- -GGUu---ga a-GCGUuaaa a---cgaaUC AGGCua--GU CUGGUAgU--
Uncu.vls6.      g---aGGCCc u--GCCUGG- -GGUU---ga a-GCGUuaaa u---cuaaUC AGGCua--GU CUGGUAgU--
Uncu.fs-2.      g---aGGCCc u--GCCUGG- -GGUU---ga a-GCGUuaaa u---cuaaUC AGGCua--GU CUGGUAgU--
Uncu.ww-5.      g---aGGCCc u--GCCUGG- -GGUU---ga a-GCGUuaaa a---cuaaUC AGGCua--GU CUGGUAgU--
Uncu.ww-6.      g---aGGCCc u--GCCUGG- -GGUU---ga a-GCGUuaaa a---cuaaUC AGGCua--GU CUGGUAgU--
Uncu.vlw1.      g---auGCCc u--GCCUGG- -GGUu---ga a-GCGUuaaa a---cuaaUC AGGCua--GU CUGGUAgU--
Uncu.vls7.      g---auGCCc u--GCCUGG- -GGUu---ga a-GCGUuaaa a---cgaaUC AGGCua--GU CUGGUAgU--
Uncu.vls8.      g---aAGCCc u--GCCUGG- -GGUU---ga a-GCGUuaaa a--cuuaaUC AGGCua--GU UUGUUAGU--
Uncu.vls9.      g---auGUCc u--GCCUGG- -GGCu---ga a-GCGUuaaa c---ucaaUC AGGCua--GU CuGUCAGU--
Uncu.vlw2.      g---auGUCu u--gCCUGG- -GGCu---ga a-GCACuaaa a---cuaaUC AGGaua--GU UuGGUAAU--
Uncu.ww-7.      g---aAGCCc u--GCCUGG- -GGUU---ga a-GCGUuaaa a---cuaaUC AGGCua--GU UuGUCAGU--
Uncu.ww-8.      g---aGGCCc u--GCCUGG- -GGUU---ga a-GCGUuaaa u---cuaaUC AGGCua--GU CUGGUAgU--
Yers.ente.      g---aCACCu u--gCCUGG- -GGUG---aa a-GCGUuaaa c---ccaaUC AGGaua--GU UuGUUAGU--
Yers.pest.      g---aaACCu u--gCCUGG- -GGUg---ga a-GCAUuaaa a---cuaaUC AGGaua--GU UuGUCAGU--
Desu.vulg.      Uga-CGgc-- ---GCUCGCC ---gCG--aa GGGUGCgaga a-aaacaGGU GAGC----Ug GUCgaAGGuu
Desu.desu.      AAc-Cggc-- --uCUCGCCG G----G-guU UUUCGCgagg aguuuaCCGG CGGGa--uUG CUGCGUUGu-
Geob.sulf.      GGGG---a-- ---GGgUCCA C--gg--CCC CaaGGCgaaa cc-uuaGUGG AaUCgc-uuc CCGgaaAU--
Geob.meta.      GGGG---a-- ---GugCC-- Cgcgg--CCC CaaGGCgaaa cu-uuaGcaG GauCgc-uuc CCGgaaAU--
Heli.pylo.      A----AGGU- ----GGUUC- -GCCU----- UUUAAAcuaa ga-aacaaGA ACUcuu-gAA ACUAuCUCa-
Camp.jeju.      Gc---GUuU- ----GACaa- -GcGU----- UGAGGUgaaa u------aaa GUCuua--GC CUUGCUUUu-
Fuso.nucl.-1.   ---------- ------UUUA ---------- ---UGGgaca u----uuUAG Ag------GA UAGUUuUag-
Fuso.nucl.-2.   ---------- ------UUUA ---------- ---UGGgaca u----uuUAG Ag------GA UAGUUuUag-
Fuso.nucl.-3.   ---------- ------UUUA ---------- ---UGGgaca u----uuUAG Ag------AA UAGUUuUag-
Stre.coel.      -----AUCCc g--GUCAC-G -GGGU----g aaGAGGgaaa c--caaaCaG UGACug--GG CCCgucGG--
Ther.fusc.      CA---GAUCa g--GCCACAG -GAUC----U GACUGGgaca ---ugcuCUG UGGCug--GG CCUgucgG--
Trop.whip.      UG--UUUGC- -c-GCUUGC- -GUGAA---C AC-CGGgacu ---uuauuGC AAGCug--GG CCUGuUga--
Myco.lepr.      GG---GUUCg ---GUCGCG- -GGAC----U CGUCGGgaca c---caacCG CGACug--GG AUCgUCau--
Myco.aviu.      GA---GUCCg ---GUCGCg- -GGAC----U CcUCGGgaca a---ccacaG CGACug--GG AUCgUCau--
Myco.tube.      GA---GUCCg ---GUCGCg- -GGAC----U CcUCGGgaca a---ccacaG CGACug--GG AUCgUCau--
Myco.bovi.      GA---GUCCg ---GUCGCg- -GGAC----U CcUCGGgaca a---ccacaG CGACug--GG AUCgUCau--
Myco.mari.      GA---GUUCg ---GUCGCg- -GGGC----U CAUCGGgaca u---caacaG CGACug--GG AUCgUCau--
Myco.smeg.      GG---GUUCg ---GUCGCg- -GGAC----C UGUGGGgaca u--caaacaG CGACug--GG AUCgUCau--
Cory.diph.      UU---GUUgu ---GUCAaCG G-GGC----A AACUGGgacu uu--caCCGa UGACug--GG CUCaUCau--
Cory.glut.      CA---AUCgc ---GUCAGCG G-GGU----U GAACAGgacu uu--uaCCGU UGACug--GG CUCaUCau--
Desu.hafn.      ---------- -c-GCCuGCC -agcuc--cc guucaaccua ua--gcaGGC uGGUccuuGg aUgcGcUu--
Deha.ethe.      ---------- ---------- ---------- --gaaagaaa u---aucggc ugguuu--Gg CUaaaUUA--
Heli.mobi.      -----GACCa a--UUCucGg aGGUC----- -cAAGCgag- ---auuuaUc -GAAua--GC CUgaCcaa--
Baci.halo.      c----ACCCu cc-GUCUGu- -GGGU----- -GaAGGaaga g--auuuauC AGACua--GC CuUACgga--
Baci.stea.      -----AUCCg cc-GCCUGa- -GGAU----- -gaGGGaaga g--augaacC AGGCua--GC CGccGgga--
Baci.mega.      -----GUUCg cc-GUCUGA- -GGAC----- -gaaGGaaga g--aauaaUC AGACua--GC GAcUGgga--
Baci.subt.      -----GUUCc c--GUCUGa- -GAAC----- -GUAAGaaga ---gaugaaC AGACua--GC UCuCggaa--
Stap.sapr.      C----ACUgc c--GUUUGA- --AGUc---u GCCUAGaaga --gauuaaUC AAACua--GC AUAAUGa---
Stap.epid.      C----ACUgc c--GCUUGA- --AGUc---u GUUUAGauga a-auauaaUC AAGCua--GU AUCAUGUU--
Stap.aure.-1.   C----ACUgc c--GUUUGA- --AGUc---u GUUUAGaaga a-acuuaaUC AAACua--GC AUCAUGuu--
Stap.aure.-2.   C----ACUgc c--GUUUGA- --AGUc---u GUUUAGaaga a-acuuaaUC AAGCua--GC AUCAUGuu--
Stap.aure.-3.   C----ACUgc c--GUUUGA- --AGUc---u GUUUAGaaga a-acuuaaUC AAGCua--GC AUCAUGuu--
Stap.aure.-4.   C----ACUgc c--GUUUGA- --AGUc---u GUUUAGaaga a-acuuaaUC AAGCua--GC AUCAUGuu--
Stap.aure.-5.   C----ACUgc c--GUUUGA- --AGUc---u GUUUAGaaga a-acuuaaUC AAGCua--GC AUCAUGuu--
Stap.xylo.      C----ACUgc c--GUUUGA- --AGUc---u GCCUAGaaga --gauuaaUC AAACua--GC AUAAUGa---
Baci.anth.      G----UUCgc c--GUCUGa- --GGA----- CaaaGGaaga --gaacaacC AGACua--GC aAcUUgga--
List.inno.      Ua---AuCUc c--GUCUGA- -GGuU----- AAaUAGaaga --gcuuaaUC AGACua--GC ugAAUGga--
List.mono.      Ua---AuCUc c--GUCUGG- -GGuU----- AAaUAGaaga --gcuuaaUC AGACua--GC ugAAUGga--
List.gray.-1.   Ua---AuCUc c--GUCUgA- -GGuU----- AAaUAGaaga --gcuuaaUg AGACua--GC ugAAUGga--
List.gray.-2.   UU---auCUc c--GUCUGG- -GGca----A A-CgAGaaga --gcauaaUC AGACua--GC uaGAUaga--
List.ivan.      Ua---AuCUc c--GUCUGG- -GGuU----- AgUUAGaaga --gcuuaaUC AGACua--GC ugAAUGga--
List.seel.      Ua---AuCUc c--GUCUGG- -GGuU----- AgUUAGaaga --gcuuaaUC AGACua--GC ugAAUGga--
List.wels.      Ua---AuCUc c--GUCUGA- -GGuU----- AGUUGGaaga --gcuuaaUC AGACua--GC ugAAUGga--
Leuc.mese.      U----uCUUa c--AUCUGGa aAAGc----- AGUAuUaaa- ----ucaaUC AGGUua--GU UAUAUUGaa-
Leuc.pseu.      U----GUUua c--AUCUGGa auGGC----- AAUGuUaaa- ----uuuaUC AGAUua--GU UAAUUUGau-
Leuc.lact.      U----GCUua g--AUUCGGa acAGC----- GGCGuUaaa- ----ugaaUC GAGUua--GU GAUUGAUgu-
Lact.delb.      C----UUUuc c--GUCUGu- --AAA----- GUUUAAaaga ---gaucauC AGACua--GC gaUACAGaa-
Lact.gass.      C----UAcuu a--cCUUAA- ---UA----- GUUAGAaaua a--gauucUU AGGuua--GU UUUGAUAGuu
Lact.sake.      U----GCcgc c--GUUUGA- --aGU----- GUUUAAaaga ---gauuuUC AAGCua--GU UAGUCCAucc
Lact.helv.      C----UAUcu c--ACCUGa- --AUA----- GUUGAAaaga --gucuuaaC AGGUua--GC UAGCUCAucc
Lact.gall.      C----UAccu c--ACCUGa- --aUA----- GUUGAAaaga --gucuuaaC AGGUua--GC UAGCUCAucc
Lact.plan.-1.   A----GCUuc c--ACCUGG- --AGU----- UgcGAGaaga --gacuaaUC AGGUua--GU CAUUGCuGg-
Carn.pisc.pa.   U----UUUuc c--GUCUGu- --AAA----- GUUUAGaaga ---gauuauC AGACua--GC gauGCAUg--
Ente.faec.-1.   U----UUUuc c--GUCUGu- --AAA----- AUUUAGagga ---gcuuacC AGACua--GC aaUACAGa--
Ente.faec.-2.   A----CUUuc c--GUCUGu- --AAG----- UUGAAAaaga ---gaacauC AGACua--GC gaUACAGa--
Ente.dura.      c----UUUUc c--GUCUGu- -AAAG----- -UUUAAaaga ---gaucauC AGACua--GC aaUACAGa--
Oeno.oeni.      gca-UUUAU- ---GUUCGGa -AUAAA---a gCAGUGaaac ---aagaaUC GAACua--GC UCucGAU---
Lact.lact.-1.   -----UGUGg a--GGCUUgA -CGCA----- --GCAAaaga ---gauuUaA AGCCccg-CA AAAUGUCG--
Lact.lact.-2.   -----UGUGg a--GGCUUgA -CGCA----- --GCAAaaga ---gauuUaA AGCCccg-CA AAAUGUCG--
Lact.lact.-3.   -----UGUGg a--GACUUgA -CGCA----- --GCAAaaga ---gauuUaA AGUCccg-CA AAAUGUCG--
Lact.lact.-4.   -----UGUGg a--GGCUUgA -CGCA----- --GCAAaaga ---gauuUaA AGUCccg-CA AAAUGUCG--
Lact.garv.      -----UAUGg u--gGCUUUA -CAUA----- --AAAAaaga g--auuuUAA AGCaccg-CA AAUUUCUG--
Lact.plan.-2.   -----UGUGg u--GUCUUg- ACAUG----- --AAAGaaga ---gauUaaG AGACucg-CC AGCUGACu--
Pedi.pent.      ----GUACUg ---GcCUG-- -GGUGC---- -uUAAGaaga g--gauuuaC AGaCuag-CG uuuUAAuGaa
Lact.raff.      -----GACGg u--GUCUUg- ACGUC----- --AGAgaaga ---gauUaaG AGACucg-CA AGUUAACu--
Stre.equi.      -----GUGAu u--GUCUAG- -UCAC----- -CUAAAaaga ---gaaccCU AGACucg-CA GGCUGAu---
Stre.uber.      -----aGCcu u--GUCUAg- -aGCc----- -UUAGUaaga ---gauuuaU AGACucg-CU AAGUAAu---
Stre.pyog.      -----GAAAu u--GUCUAg- -UUUC----- -GUGACaaga ---gauugaU AGACucg-CA AACUAAu---
Stre.suis.pa.   -----AUUGa ---GUCAGg- -CAGU----- -UCCAAaaga ---gauuuaC UGACucg-CU UGGuCUa---
Stre.ther.      -----UCAuu ---GCCUAg- -cUGG----- -UCGAAaaga ---gauuuaU AGGCucg-CA uAUAGaa---
Stre.gord.      -----AUCuu ---GUCUAg- -uGAU----- -UUUACaaga ---gauugaU AGACucg-CU UGAUUUg---
Stre.miti.      -----GCCuu ---GUCUAg- -cGGC----- -UUGAUaaga ---gauugaU AGACucg-CG GUUUCUa---
Stre.pneu.      -----GCCuu ---GUCUAg- -cGGU----- -UUGAUaaga ---gauugaU AGACucg-CA GUUUCUa---
Stre.muta.      -----ACuGa ---GUCAGg- -CuGU----- -UCUAAaaga ---guucuaC UGACucg-CA UCGUUAg---
Myco.capr.      UAUgA----- ---UUGCAA- -----UaaAU AUAUUUgaaa ---ucuaaUU GCAAaug-AU AUUUAACc--
Urea.urea.      UGUUGuu--- ---UaAAUU- -----UaAAU AGAUuuaaca -----aauAG UUaGu---ua aUuUUAAa--
Spir.kunk.      UCUAAUu--- ---GAUAAU- ----GU-UAG AAUUUUgaaa ---gucuuAU UAUCua--AU UAUUUAAU--
Myco.geni.      UUAAAuc--- ---GUUCaA- -----U-UUA ACCUUua--- ----aaaaUa GAACuug-UU GUUUCCAu--
Myco.pneu.      UUAAcuG--- ---GUUCAa- ---C---UUA AUCCUua--- ----aauuaU GAACuua-UC GUUUACUU--
Myco.pulm.      UGAA-GUUGc u--CUAGCgu -CAAU--UUC AUgAA----- ----auuuaG CUAGuug-AU UUAAUAGAa-
Clos.ther.      ACAG---Ug- ---GUAGCCU UgAg---CUG UGAUGGauu- ---uuaAAGG CUAC----Ug aU-AUCCAaa
Ther.teng.      UUUG-CCU-- ----gcGCCU CgGGG--CAA AACCGGaau- ---aauGAGG Cua-----CC gaAGCGGUua
Clos.perf.      CCUA-GCa-- ----aAGCUU UgaGC--UAG GaaCGGaau- --uuauGAAG CU------Ua cCAaAGAGga
Clos.botu.      UCUU-ACa-- ----aAGCUU UgaGU--AAG GaaCGGaau- --uaauGAAG CUa-----CU gaaUCUAGga
Clos.diff.      UUUA-GGg-- ----guGUCU CgaCU--UGA AGUAGa-uu- --aauuGGGA Cug----gCU aaGCAUAGa-
Clos.acet.-1.pa.CCUU-ACa-- ----aAGCUU UgaGU--AAG GaaCGgaau- --uuauGAAG CUa----cUg aaGUGAAAa-
Clos.acet.-2.   CCUU-ACa-- ----aAGCUU UgaGU--AAG GaaCGGaau- --uuauGAAG CUa----cUg aaGUGAAAa-
Rumi.albu.      UG---CGGU- -----ugccc GGUCGu---U GUauGCcau- --uuuaCcaa a------gCg agG--GgGc-
Carb.hydr.      UGA-AGGGU- -----GUCCC GGCUCU--UC AUAAGCgag- auuuuaCGGG AUa----gCC CGAUUGuG--
support         -----SSS-- ---SSSSSS- --SSS----- --SSSS---- --------SS SSSS----SS SSSSSS----

                ....|....| ....|....| ....|....| ....|....| ....|....| ....|....| ....|....|
                   565        575        585        595        605        615        625    
p-pre           --vvv----w www-xxxvvv ---uuuuu-t tttt---zzz -zz--AAAAA zzzzz---AA AAABBBB--C
psknts          (((((((((( (((((((((( (((((((((( (((((((((- -pseudokno t-IV-))))) ))))))))))
hel-10          --111----1 111-111111 ---1111111 1111---111 -11--11111 11111---11 1111111--1
hel-1           --000----1 111-111000 ---0000000 0000---333 -33--44444 33333---44 4445555--6
hel-x           --ccc----a aaa-bbbccc ---bbbbb-a aaaa------ ---------- ---------- ----------
Aqui.aeol.      gaGCUu---G CCC-GUGGGC ga-CCCGA-G GGgAaau--- ---------- ---------- ----------
Ther.mari.      cacCCu---G CCC-GUGGGa gg-UCcCU-C CCGagagcg- ---------- ---------- ----------
Chlo.aura.-1.   guCGCuuu-G CCa-CUCGUG ---cgacu-G CgGgugaga- ---------- ---------- ----------
Chlo.aura.-2.pa.guCGCuuu-G CCa-CUCGUG ---cgacu-G CgGgugaga- ---------- ---------- ----------
Ther.ther.      -cGCCc---G UCC-GCGGGC caaGCCAG-G AGgacac--- ---------- ---------- ----------
Dein.radi.      gaACCu---g CCC-ACUGGU ga-gCGC--c GGCCcgacaa -u-------- ---------- ----------
Porp.ging.      uuGGGuc-gU UUC-AGcCUC c--GCuCG-c UCacgaaaa- ---------- ---------- ----------
Bact.frag.      gauGG----C UUU-GgUUCu ---GcUCC-U GCacgaaaaa ---------- ---------- ----------
Bact.fors.      gguGG----C UUC-GgUCUu ---GCCGC-A GCacgaaaa- ---------- ---------- ----------
Tann.fors.      gguGG----C UUC-GgUCUu ---GCCGC-A GCacgaaaa- ---------- ---------- ----------
Prev.inte.      gguGG----U UCA-GgUCUu ---GCCAA-U GCUcgaaaa- ---------- ---------- ----------
Cyto.hutc.      g-GGU----G CCG-GUGACC u--GCUAc-A GCUcgaaaa- ---------- ---------- ----------
Chlo.tepi.      -cgcUg---C UGGcGGUGua a---UCGg-a CCacgaaaaa ---------- ---------- ----------
Chla.psit.      caUAGau-gU UCU-UAGCUG a-gGAAGUuC AAUGuaug-- ---------- ---------- ----------
Chla.pneu.      uaUAGag-gC UUC-UAGCUA a-gGgAGUcC AAUGuaaac- ---------- ---------- ----------
Chla.abor.      caUAGau-gU UCU-UAGCUG a-gGAAAUgC AACGuuaga- ---------- ---------- ----------
Chla.trac.      uaUAGgg-gU UUC-UAGCUG a-gGAGACaU AACGuauag- ---------- ---------- ----------
Chla.muri.      uaUAGag-gU UUC-UAGCUG a-gGAGAUaU AACGuaaaa- ---------- ---------- ----------
Osci.spec.      ---------- ---------- ---------- -------AUC -CUguCAUCC GGGAUaauGG AUGGUCCccG
Anab.spec.      ---------- ---------- ---------- -------AUC -CUa-CGUUC GGGAUaauGA ACGAUUCccG
Chro.spec.      ---------- ---------- ---------- -------AUC -CUacUAUCA GGGAUaauUG AUAGUUCcaG
Nost.punc.      ---------- ---------- ---------- -------AUC -CUa-CGUUC GGGAUaauGA ACGAUUCccG
Frem.dipl.      ---------- ---------- ---------- -------AUC -CUa-CGUUC GGGAUaauGA ACGAUUCccG
Plec.bory.      ---------- ---------- ---------- -------aUC -CUauUGUCC GGGAcaaaGG ACAGUUCccG
Tric.eryt.      ---------- ---------- ---------- -------AUC -CCacUAUCC GGGAUaauGG AUAGUCCcaG
Syne.spec.-1.   ---------- ---------- ---------- -------AUC -CCacCAUCa GGGAUaaucG AUGGuCCccG
Syne.spec.-2.   ---------- ---------- ---------- -------AUC -CCgcCAACG GGGAUaauCG UUGGCUCccG
Syne.spec.-3.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Syne.spec.-4.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Proc.mari.-2.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Proc.mari.-1.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Syne.spec.-5.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Syne.spec.-6.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Cyan.para.cy.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Porp.purp.cl.   --uucuuauG uUU-UUUacc u--------- ---------- ---------- ---------- ----------
Odon.sine.cl.   --ccuc---G UUCcAUc--u ---------- ---------- ---------- ---------- ----------
Pavl.luth.cl.pa.---------- ---------- ---------- ---------- ---------- ---------- ----------
Boli.spec.pl.   --UAAuu-uG UUC-AUUUUA ---------- ---------- ---------- ---------- ----------
Guil.thet.cl.   --aAA----A GGU-G-AUUc aucauu---- ---------- ---------- ---------- ----------
Thal.weis.cl.   --AcUc---G UUC-GAAAaU u--------- ---------- ---------- ---------- ----------
Meso.viri.cl.   ---CUcc-aG CUU-UGUGGa uua------- ---------- ---------- ---------- ----------
Recl.amer.mt.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Fibb.succ.      --Cga-cc-U UCU--UG--G ---GCGUG-G Auaaga-cga gauc------ ---------- ----------
Trep.dent.      --cUu----U CGG-UGCuGc ---UacCG-G AUCCcuacaa ---------- ---------- ----------
Trep.pall.      --CgU----G CGG-UGCAgG cc-UagCA-G AGUCcgacaa a--------- ---------- ----------
Borr.burg.      --GGuuu-gC UAG-UAUuUC caaACCAu-A UUGCuu---- ---------- ---------- ----------
Rhod.palu.      -cUc-----G UCG-GGg-cA ---------- ---------- ---------- ---------- ----------
Magn.magn.-1.   -cUc-----G CCG-GUCgcA a--------- ---------- ---------- ---------- ----------
Magn.magn.-2.   -cUU-----G CCG-Ggc-AA ---------- ---------- ---------- ---------- ----------
Rhod.rubr.      -cuU-----G CCG-GcuuGu ---------- ---------- ---------- ---------- ----------
Meth.exto.pa.   ---------G CCG-GUCgca a--------- ---------- ---------- ---------- ----------
Brad.japo.      -cuu-----G CCG-GUuc-- ---------- ---------- ---------- ---------- ----------
Meso.loti.      -cuu-----G UCG-GcUu-- ---------- ---------- ---------- ---------- ----------
Bruc.meli.      -cUU-----G UCG-GCgcAA ---------- ---------- ---------- ---------- ----------
Sino.meli.      -ccu-----G CCG-UCUuc- ---------- ---------- ---------- ---------- ----------
Rhiz.legu.      -ccu-----G CCG-GCUuuc g--------- ---------- ---------- ---------- ----------
Agro.tume.      -ccU-----G CCG-GGgcAa ---------- ---------- ---------- ---------- ----------
Caul.cres.      -ccu-----G UcC-GGCuuc g--------- ---------- ---------- ---------- ----------
Sili.pome.      -uuu-----G UUC-CCu--- ---------- ---------- ---------- ---------- ----------
Rhod.spha.      --cuU----G UCC-GGGGca a--------- ---------- ---------- ---------- ----------
Rick.prow.      --UAc----G CUA----aUA ---------- ---------- ---------- ---------- ----------
Rick.typh.      --------cG CUA----aua ---------- ---------- ---------- ---------- ----------
Rick.cono.      --cuU----G CUA----Aua ---------- ---------- ---------- ---------- ----------
Sphi.arom.      --ccGg---G CCG-GUUCa- ---------- ---------- ---------- ---------- ----------
Ehrl.chaf.      --uuu----G UGC--u-uuu --a------- ---------- ---------- ---------- ----------
Wolb.spec.      --AAA----G UAC-au-UUU --gu------ ---------- ---------- ---------- ----------
Chro.viol.      --GCCu---G UCc-GUCGGC --guGGCa-g aGGUuaaa-- ---------- ---------- ----------
Neis.gono.      -gGCCu---G UUG-GUCGGC --aUgaUG-G AAAUaaga-- ---------- ---------- ----------
Neis.meni.-1.   -gGCCu---G UUG-GUCGGC --aUgaUG-G AAAUaaga-- ---------- ---------- ----------
Neis.meni.-2.   -gGCCu---G UUG-GUCGGC --aUgaUG-G AAAUaaga-- ---------- ---------- ----------
Uncu.u02-.      --GGGu---G UCc-CcUCCC -----gacaA UGAUcguuaa aa-------- ---------- ----------
Nitr.euro.      -aGCCu---G CCG-GUUGGC ---GGauGcC AGGUcaaa-- ---------- ---------- ----------
Meth.glyc.      --GCUu---G CUc-GUUGGU --gAGCAu-C AGGUuaaa-- ---------- ---------- ----------
Nitr.cryo.      --GCCc---G CCA-GCUGGC --gGuUGu-C AGGUuaaa-- ---------- ---------- ----------
Uncu.u04-.pa.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Alca.faec.      --GCCu---G UCA-AUUGGC -auagUCC-a aGGUuaaa-- ---------- ---------- ----------
Bord.para.      --GCCc---G UCG-AUCGGC -uaaGuCC-A GGGUuaaa-- ---------- ---------- ----------
Bord.pert.      --GCCc---G UCG-AUCGGC -uaaGuCC-A GGGUuaaa-- ---------- ---------- ----------
Bord.bron.am.   --GCCc---G UCG-AUCGGC -uaaGuCC-A GGGUuaaa-- ---------- ---------- ----------
Coma.test.      a-gCGu---G UGC-CUGCGg -ggUUUGG-G UGGUgagau- ---------- ---------- ----------
Hydr.pall.      a-GCGu---G CCa-CUGCGC -gacuCGG-G cGGUgagac- ---------- ---------- ----------
Vari.para.      a-GCGu---G UGA-CUGCGC -gacuCCG-G AaGUgagac- ---------- ---------- ----------
Burk.pseu.      --GCGu---G UUC-GUCCGC --gaCGUc-A CGGUuaaa-- ---------- ---------- ----------
Burk.mall.      --GCGu---G UUC-GUCCGC --gaCGUc-A CGGUuaaa-- ---------- ---------- ----------
Burk.cepa.      --GCGu---G UUC-GUCCGC --guCGCU-G CGGUuaaa-- ---------- ---------- ----------
Burk.fung.      --GCGu---G UUC-GUCCGC --guCGCU-A CGGUuaaa-- ---------- ---------- ----------
Alca.eutr.      -agCGu---G UUC-GUCCGa ----UGCG-c CGGUuaaa-- ---------- ---------- ----------
Rals.eutr.      --GCGu---G UUC-GUCCGC --gaUGCG-c CGGUuaaa-- ---------- ---------- ----------
Rals.meta.      --GCGu---G UUC-GUCCGC --gaUGCG-c CGGUuaaa-- ---------- ---------- ----------
Rals.sola.      --GCGu---G UUC-GUCCGC --guCGCG-c CGGUuaaa-- ---------- ---------- ----------
Rals.pick.      --GCGu---G UUC-GUCCGC --gaUGCG-G CGGUuaaa-- ---------- ---------- ----------
Acid.ferr.-1.   -aUCCu---G UcU-GUCGGA -ggGCGGU-G cGGUuaaa-- ---------- ---------- ----------
Acid.ferr.-2.   -aUCCu---G UcU-GUCGGA -ggGCGGU-G cGGUuaaa-- ---------- ---------- ----------
Fran.tula.      -aCCCu---G GCUaAUUGGG --gAAUAGuc aAGCuaaa-- ---------- ---------- ----------
Dich.nodo.      -uGCCu---G AGC-GUUGGC --ugUUUa-U GAGUuaaa-- ---------- ---------- ----------
Xyle.fast.-1.   -gCGCu-uug CCU-GUCGUG -cuGCCCG-G cGACgag--- ---------- ---------- ----------
Xyle.fast.-2.   -gCGCu-uug CCU-GUCGUG -cuGCCCG-G cGACgag--- ---------- ---------- ----------
Xyle.fast.-3.   -gCGCu-uug CCU-GUCGUG -cuGCCCG-G cGACgag--- ---------- ---------- ----------
Xant.camp.      -gCGCu-uug CCC-gCCGUG -cuGCCUG-G GAACgag--- ---------- ---------- ----------
Xant.axon.      -gCGCu-uuG CCa-aCCGUG -cuGCCUG-G GAACgag--- ---------- ---------- ----------
Legi.pneu.      -aUCCu---G CCc-GUCGGA ---GGaGCcA CAGUuaaa-- ---------- ---------- ----------
Coxi.burn.      --CCCu---G CAc-GUCGGG --cGAUUG-A CUGUuaaa-- ---------- ---------- ----------
Meth.caps.      c-CCU----g CCA-CUCGGG --uaGCGu-c CGGCuaaa-- ---------- ---------- ----------
Uncu.u01a.      --CCGu---G CCU-GUCCGG ---gagCC-A ACGUcgaaaa ---------- ---------- ----------
Uncu.u01b.      --CCGu---G CCU-GUCCGG ---gaaCC-A ACGUcgaaaa ---------- ---------- ----------
Acin.ADP1.      -aCCCu---G uUc-GUCGGG --ucACuG-G GUGUuaaa-- ---------- ---------- ----------
Micr.degr.      -uCCC----G cCC-GCUGGG --cUGuAA-A GCGUuaaa-- ---------- ---------- ----------
Pseu.aeru.      -aCCCu---G CCA-CUCGGG --cgGCgc-G GAGUuaac-- ---------- ---------- ----------
Azot.vine.      -aCCCu---G CCC-GUCGGG --ccGCaa-U GGGUuaac-- ---------- ---------- ----------
Pseu.puti.      -aCCCu---G CCc-GUCGGG c-ggcUgc-g Ga-Uuaaa-- ---------- ---------- ----------
Pseu.fluo.-1.   -aCCCu---G CCc-GUCGGG --ucGCUg-a GGGUuaac-- ---------- ---------- ----------
Pseu.fluo.-2.   -aCCCu---G CCc-UUCGGG --ucGCUg-a GGGUuaac-- ---------- ---------- ----------
Pseu.syri.-1.   -aCCCu---G CCc-GUCGGG --ucGCug-a GGGUuaac-- ---------- ---------- ----------
Pseu.syri.-2.   -aCCCu---G CCc-GUCGGG --ucGCUg-a GGGUuaac-- ---------- ---------- ----------
Mari.hydr.      -aCCCu---G acc-UUcGGG --ucGCuu-G AGGUuaaa-- ---------- ---------- ----------
Pseu.halo.      -aCCGu---G UuU-GUCCGG --gAuuUA-A AGGUuaa--- ---------- ---------- ----------
Uncu.ww11.      -aUCCu---G UCU-UUCGGA -guUUauU-C GGGUuaau-- ---------- ---------- ----------
Shew.putr.      -aUCCu---G UCU-UUCGGA --gUUCAa-A CGGUuaaa-- ---------- ---------- ----------
Colw.spec.      --GCCu---G UCG-CUUGGC --gUcUaa-U ugGuuaa--- ---------- ---------- ----------
Phot.phos.      -aGCGu---G UCA-AUUCGC --aGUGac-G AUACgaga-- ---------- ---------- ----------
Vibr.chol.      -aGCGu---G UCG-GUUCGC --aGGC-G-G UGGUgaaa-- ---------- ---------- ----------
Aero.salm.      -gGCGu---G UCu-CUCCGC --aGCGGG-U UGGCgaau-- ---------- ---------- ----------
Uncu.vlw3.      -gGCGu---G UCu-CUCCGC --aGCGGG-U UGGCgaau-- ---------- ---------- ----------
Uncu.vlw4.      -gGCGu---G UCu-CUCCGC --aGCGGG-U UGGCgaau-- ---------- ---------- ----------
Uncu.vls1.-3.   -gGCGu---G UCu-CUCCGC --aGCGGG-U UGGCgaau-- ---------- ---------- ----------
Uncu.rca3.      -gGCGu---G UCu-CUCCGC --aGCGGG-U UGGCgaau-- ---------- ---------- ----------
Uncu.vls1.-4.   -gGCGu---G UCu-CUCCGC --aGCGGG-U UGGCgaau-- ---------- ---------- ----------
Uncu.ww-9.      -gGCGu---G UCu-CUCCGC --aGCGUG-U UGGCgaau-- ---------- ---------- ----------
Uncu.ww10.      -gGCGu---G UCu-CUCCGC --aGCGUG-U UGGCgaau-- ---------- ---------- ----------
Uncu.vlw5.      -gGCGu---G UCu-CUCCGC --aGCGUG-U UgGCgaau-- ---------- ---------- ----------
Uncu.vlw6.      -gGCGu---G UCu-CUCCGC --aGCGUG-U UGGCgaau-- ---------- ---------- ----------
Uncu.rca4.      -gGCGu---G UCG-GUCCGC --aGCUGG-A UGGUgaau-- ---------- ---------- ----------
Uncu.rca7.      -gGCGu---G UCG-GUCCGC --aGCUGG-A UGGUgaau-- ---------- ---------- ----------
Uncu.rca8.      -gGCGu---G UCG-GUCCGC --aGCUGG-G UGGCgaau-- ---------- ---------- ----------
Uncu.lem1.      -gGCGu---G UCG-GUCCGC --aGCUGG-G UGGCgaau-- ---------- ---------- ----------
Uncu.lem2.      -ggCGu---G gCG-GaCCGg --aGcUGg-G UGGCgaau-- ---------- ---------- ----------
Past.mult.      -cGCGu---G UCU-GUCCGC --aGUGGG-U AAAUgaaa-- ---------- ---------- ----------
Mann.haem.      -uGCGu---G UCU-GUCCGC --uGUGAA-U AAGCgaaa-- ---------- ---------- ----------
Haem.somn.      -gGCGu---G UCU-GUCCGC --aGUCAA-u uuACgaaa-- ---------- ---------- ----------
Haem.infl.      -aGCGu---G UCU-GUCCGC ---AuGCU-U AAGUgaaa-- ---------- ---------- ----------
Haem.ducr.      -uGCGu---G UCU-GUCCGC --uGGAGA-U AAGCgaaa-- ---------- ---------- ----------
Acti.pleu.      -uGCGu---G UCU-GUCCGC --uGGAGG-U AAGUgaaa-- ---------- ---------- ----------
Acti.acti.      -cGCgu---G UCC-GUCaGC ---AgGAU-U AAGUgaau-- ---------- ---------- ----------
Buch.aphi.      --aUGa---G UUU-UUCCAa ---aUUAA-G Caaugaaaaa a--------- ---------- ----------
Buch.APS-.      --aUGu---G UUU-UUCCAa ---AUUAG-G UAaugaau-- ---------- ---------- ----------
Esch.coli.-1.   -gGCGu---G UCc-GUCCGC --aGCUGG-C AAGCgaau-- ---------- ---------- ----------
Esch.coli.-2.   -gGcGu---G Ucc-GUCCaC --aGCUGG-C AAGCgaau-- ---------- ---------- ----------
Esch.coli.-3.   -gGCGu---G UCc-GUCCGC --aGCUGG-C AAGCgaau-- ---------- ---------- ----------
Prov.rett.      -gGCGu---G UCU-GUCCGC --aGCUGG-C AAAUgaau-- ---------- ---------- ----------
Salm.typh.-1.   -gGCGu---G UCc-GUCCGC --aGgUGC-C AGGCgaau-- ---------- ---------- ----------
Salm.typh.-2.   -gGCGu---G UCc-GUCCGC --aGgUGC-C AGGCgaau-- ---------- ---------- ----------
Salm.ente.-1.   -gGCGu---G UCc-GUCCGC --aGgUGC-C AGGCgaau-- ---------- ---------- ----------
Salm.ente.-2.   -gGCGu---G UCc-GUCCGC --aGgUGC-C AGGCgaau-- ---------- ---------- ----------
Shig.flex.      -gGCGu---G UCc-GUCCGC --aGCUGG-C AAGCgaau-- ---------- ---------- ----------
Shig.dyse.      -gGCGu---G UCc-GUCCGC --aGCUGG-C AAGCgaau-- ---------- ---------- ----------
Salm.para.      -gGCGu---G UCc-GUCCGC --aGgUGC-C AGGCgaau-- ---------- ---------- ----------
Erwi.caro.      -gGCGu---G UCu-GUCCGC --aGCUGG-C AAGCgaau-- ---------- ---------- ----------
Erwi.chry.      -gGCGu---G UCU-GUCCGC --aGCUGG-C AAGCgaau-- ---------- ---------- ----------
Kleb.pneu.      -gGCGu---G UCu-GUCCGC --aGCUGG-C AAGCgaau-- ---------- ---------- ----------
Uncu.rca1.      -gGCGu---G UCC-AUCCGC --aGCUGA-C cGGCgaau-- ---------- ---------- ----------
Uncu.vls1.-1.   -gGCGu---G UCC-GUUCGC --aGCUGA-C cGGCgaau-- ---------- ---------- ----------
Uncu.vls3.      -gGCGu---G UCC-GUUCGC --aGCUGA-C cGGCgaau-- ---------- ---------- ----------
Uncu.vls4.      -gGCGu---G UCc-CUCCGC --aGCguG-U -uGCgaau-- ---------- ---------- ----------
Uncu.ww-1.      -gGCGu---G UCu-G-CCGC --aGCUGG-C GuGCgaau-- ---------- ---------- ----------
Uncu.rca2.      -gGCGu---G UCu-GUCCGC --aGCUGG-C GuGCgaau-- ---------- ---------- ----------
Uncu.ww-2.      -gGCGu---G UCu-GU-CGC --aGCUGG-C GuGCgaau-- ---------- ---------- ----------
Uncu.ww-3.      -gGCGu---G UCu-GUCCGC --aGCUGG-C GuGCgaau-- ---------- ---------- ----------
Uncu.ql-1.      -gGCGu---G UCu-GUCCGC --aGCUGG-C GuGCgaau-- ---------- ---------- ----------
Uncu.ww-4.      -gGCGu---G UCu-GUCCGC --aGCUGG-C GuGCgaau-- ---------- ---------- ----------
Uncu.vls1.-2.pa.-gGCGu---G UCu-G-CCGC --aGCUgg-c gugcgaau-- ---------- ---------- ----------
Uncu.vls5.      -gGCGu---G UCc-GUCCGC --aGgUGC-C AGGCgaau-- ---------- ---------- ----------
Uncu.fs-1.      -gGCGu---G UCc-GUCCGC --aGgUGC-C AGGCgaau-- ---------- ---------- ----------
Uncu.vls6.      -gGCGu---G UCu-GUCCGC --aGgUGC-C AGGCgaau-- ---------- ---------- ----------
Uncu.fs-2.      -gGCGu---G UCu-GUCCGC --aGgUGC-C AGGCgaau-- ---------- ---------- ----------
Uncu.ww-5.      -gGCGu---G UCu-GUCCGC --aGgUGC-C AGGCgaau-- ---------- ---------- ----------
Uncu.ww-6.      -gGCGu---G UCu-GUCCGC --aGgUGC-C AGGCgaau-- ---------- ---------- ----------
Uncu.vlw1.      -gGCGu---G UCc-GUCCGC --aGgUGC-C AGGCgaau-- ---------- ---------- ----------
Uncu.vls7.      -gGCGu---G UCc-GcCCGC --aGgUGC-C AGGCgaau-- ---------- ---------- ----------
Uncu.vls8.      -gGCGu---G UCc-GUCCGC --aGCUGG-C AAGCgaau-- ---------- ---------- ----------
Uncu.vls9.      -aGCGu---G UCc-AUCCGC --aGCUGG-C cGGCgaau-- ---------- ---------- ----------
Uncu.vlw2.      -gGCGu---G UCu-AUCCGC --aGUUGC-C cGGCgaau-- ---------- ---------- ----------
Uncu.ww-7.      -gGCGu---- UCC--UCCGC --aGCUGG-C cAGCgaau-- ---------- ---------- ----------
Uncu.ww-8.      -gGCGu---G UCu-GUCCGC --aGgUGC-C AGGCgaau-- ---------- ---------- ----------
Yers.ente.      -gGCGu---G UCC-GUCCGC --aGCUAA-C cGGCgaau-- ---------- ---------- ----------
Yers.pest.      -aGCGu---G UCC-AUCCGC --aGCUGG-C cGGCgaau-- ---------- ---------- ----------
Desu.vulg.      --gcCu--gG UCG-GgGGcg aaaCCUga-G AUgAcgau-- ---------- ---------- ----------
Desu.desu.      --GcCu--gG UCA-GgGGcC aa-CAGCG-C GGUGaaaua- ---------- ---------- ----------
Geob.sulf.      --CcC---uG CCA-GGGGaG --aGUcgggC GGcuaaauca ---------- ---------- ----------
Geob.meta.      --CcC---uG CCA-GGGGaG --aGUcgggC GGcuaaauca ---------- ---------- ----------
Heli.pylo.      agGUUuu-aG AAAgUUGGAC -caGAGcU-A GUUUuaaggc uaa------- ---------- ----------
Camp.jeju.      gaGUUuu-gG aAG-AUGAGC ---GAAGU-A GGGUgaag-- ---------- ---------- ----------
Fuso.nucl.-1.   uuagCcc-uG UUU-AC-Ggg ---aGuAA-U UAUUacgaaa ---------- ---------- ----------
Fuso.nucl.-2.   uuagCcc-uG UUU-AC-Ggg ---aGuAA-U UAUUacgaaa ---------- ---------- ----------
Fuso.nucl.-3.   uuagCcc-uG UUU-AC-Ggg ---aGuAA-U UAUUacgaaa ---------- ---------- ----------
Stre.coel.      ---aGacuuG UCC-GCgUga u--CUccg-G GGCCgagaaa ---------- ---------- ----------
Ther.fusc.      ---CGacuuG UCU-GCgUGa g--Cgccg-G GGCCgaggag a--------- ---------- ----------
Trop.whip.      --UUuagauU CCG-CUGcAA a--gaAuCaG GGCUgaguau ---------- ---------- ----------
Myco.lepr.      -ccUGgcuaG UUC-GCgUGa u--caGGa-G AUCCgaguag ---------- ---------- ----------
Myco.aviu.      -cUCGgcuaG UUC-GCgUGA c--cgGGa-G AUCCgagcag ---------- ---------- ----------
Myco.tube.      -cUCGgcuaG UUC-GCgUGA c--cgGGa-G AUCCgagcag ---------- ---------- ----------
Myco.bovi.      -cUCGgcuaG UUC-GCgUGA c--cgGGa-G AUCCgagcag ---------- ---------- ----------
Myco.mari.      -ccUGgcuaG UUC-GCgUGa c--caGGa-G AUCCgagcag ---------- ---------- ----------
Myco.smeg.      -cUCGgcuuG UUC-GUgUGA c--cgGGa-G AUCCgaguag ---------- ---------- ----------
Cory.diph.      -ccgGguguG UUC-GUcCaa g--ccGGa-G AGCCgaguag ---------- ---------- ----------
Cory.glut.      -ccGGaaguG UUC-GUcCUa g--ccGGa-G GGCCaagcag ---------- ---------- ----------
Desu.hafn.      --CGC----G CG---CCGUG c--uGuCccg GgaCgagauc u--------- ---------- ----------
Deha.ethe.      -gGCc----- GgC-aaaaGC ---UAGcc-- AGaCaagauu a--------- ---------- ----------
Heli.mobi.      -cCuCu---G UCU-GcCGuG c-ggaaG-ga AGGCgaaauc ua-------- ---------- ----------
Baci.halo.      -aGCCu---G UCG-CUGGGC --ugaaGUaA cGGCgaaa-- ---------- ---------- ----------
Baci.stea.      -gGCCu---G UCG-GUAGGC --ggaaCgga CGGCgaa--- ---------- ---------- ----------
Baci.mega.      -cGCCu---G UUG-GUAGGC --agaaCAgc UCGCgaa-u- ---------- ---------- ----------
Baci.subt.      -gGCCc---G CCc-GCAGGC --aagaaGau GAGUgaaac- ---------- ---------- ----------
Stap.sapr.      -cGGau---G UCU-AUCaCC --uccCAU-U AUGCgaaa-- ---------- ---------- ----------
Stap.epid.      --GGUu---G UUU-AUUGCU --uAGCAU-G AUGCgaaaa- ---------- ---------- ----------
Stap.aure.-1.   --GGUu---G UUU-AUCACU --uuuCAU-G AUGCgaaac- ---------- ---------- ----------
Stap.aure.-2.   --GGUu---G UUU-AUCACU --uuuCAU-G AUGCgaaac- ---------- ---------- ----------
Stap.aure.-3.   --GGUu---G UUU-AUCACU --uuuCAU-G AUGCgaaac- ---------- ---------- ----------
Stap.aure.-4.   --GGUu---G UUU-AUCACU --uuuCAU-G AUGCgaaac- ---------- ---------- ----------
Stap.aure.-5.   --GGUu---G UUU-AUCACU --uuuCAU-G AUGCgaaac- ---------- ---------- ----------
Stap.xylo.      -cGGau---G UCU-AUCaCC --uccCAU-U AUGCgaaa-- ---------- ---------- ----------
Baci.anth.      -aGCCu---G UCG-AUAGGC --cgaaGAgu UcGCgaaa-- ---------- ---------- ----------
List.inno.      -aGCCu---G UUA-CCGGGC --ugaUGUuU auGCgaaa-- ---------- ---------- ----------
List.mono.      -aGCCu---G UUA-CCGGGC --cgaUGUuU auGCgaaa-- ---------- ---------- ----------
List.gray.-1.   -aGCCu---G UUA-CCGGGC --ugaUGUuU auGCgaaa-- ---------- ---------- ----------
List.gray.-2.   --GCCcu--G acG-CCGGGC --agacAUcU auGCgaaa-- ---------- ---------- ----------
List.ivan.      -aGCCu---G UUA-CCGGGC --ugaUGUuU auGCgaaa-- ---------- ---------- ----------
List.seel.      -aGCCu---G UUA-CCGGGC --ugaUGUuU auGCgaaa-- ---------- ---------- ----------
List.wels.      -aGCCu---G UUA-CCGGGC --cgaUGUuU auGCgaaa-- ---------- ---------- ----------
Leuc.mese.      gaGCCuu--G aGC-UAUGGC -agaCAAU-A UAAUgaac-- ---------- ---------- ----------
Leuc.pseu.      uaGCCgu--G UGU-UAUGGC -guaCAAA-U UGAUgaaa-- ---------- ---------- ----------
Leuc.lact.      uaGCCuc--G UGU-UGUGGC -ggaAUCA-A UCAUgaaa-- ---------- ---------- ----------
Lact.delb.      -uGCCu---G UCA-cUcGGC -aagCUGU-A aaGCgaaac- ---------- ---------- ----------
Lact.gass.      uaGCCcu--G UUA-UAUGGC guuUUAUC-A AAGCgaag-- ---------- ---------- ----------
Lact.sake.      gaGCCuc-uG UUG-AACGGC guuuUGGG-C UAGCgaauu- ---------- ---------- ----------
Lact.helv.      uaGCCcu--G UUA-UAUGGC guuuUGAG-C UAGUgaag-- ---------- ---------- ----------
Lact.gall.      uaGCCcu--G UUA-UAUGGC guuuUGGG-C UAGUgaag-- ---------- ---------- ----------
Lact.plan.-1.   guGCCcu--g UCA-UACGGC g-uUuGCA-A UGAUgaaa-- ---------- ---------- ----------
Carn.pisc.pa.   auGCCu---G UUA-gGCGGC --uaAUGU-u caGCgaaa-- ---------- ---------- ----------
Ente.faec.-1.   auGCCu---G uCA-CUCGGC a-cgCUGU-A aaGCgaacc- ---------- ---------- ----------
Ente.faec.-2.   auGCCu---G UCA-CUCGGC a-agCUGU-A aaGUgaauc- ---------- ---------- ----------
Ente.dura.      auGCCu---G UCA-CUCGGC a-agCUGU-A aaGCgaaac- ---------- ---------- ----------
Oeno.oeni.      uuGGaa---G UUA-GCAaCC --uaAUCu-u GAGCgaa--- ---------- ---------- ----------
Lact.lact.-1.   cuGUUu---G aG--acUGGC u-uUGGCA-U UUUGuu---- ---------- ---------- ----------
Lact.lact.-2.   cuGUUu---G aG--acUGGC u-uUGGCA-U UUUGuu---- ---------- ---------- ----------
Lact.lact.-3.   cuGUUu---G aG--acUGGC u-uUGGCA-U UUUGuu---- ---------- ---------- ----------
Lact.lact.-4.   cuGUUu---G aG--acUGGC u-uUGGCA-U UUUGuu---- ---------- ---------- ----------
Lact.garv.      cuGUUu---G aG--acUGGC u-uUGGAA-A UUUGuu---- ---------- ---------- ----------
Lact.plan.-2.   uuGuUc---G aGg-auUGuC u--uGUCA-G UUGGgu---- ---------- ---------- ----------
Pedi.pent.      --GCCcc--g aCA-UACGGC --gUcUUA-u uuCGcgaaa- ---------- ---------- ----------
Lact.raff.      uuGuUc---G aGg-auUGuC u--cGUUA-G CUUGuu---- ---------- ---------- ----------
Stre.equi.      --GGCuugaG UUA-UGUGUC ----cUUG-G UCUGuu---- ---------- ---------- ----------
Stre.uber.      --GGCuugaG UUA-UGUGUC ----cUUA-C UUAGuc---- ---------- ---------- ----------
Stre.pyog.      --GGCuugaG UUA-UGUGUC ----uUUA-G UUUGuu---- ---------- ---------- ----------
Stre.suis.pa.   --GGUuugag uua-ug-AUC ----gAGu-U CAAGuu---- ---------- ---------- ----------
Stre.ther.      --GGCuugaG UUA-UGUGUC ----gcCU-A UcUGuu---- ---------- ---------- ----------
Stre.gord.      --GGCuugaG UUA-UGUGUC ----aAAA-U CAAGuu---- ---------- ---------- ----------
Stre.miti.      --GGCuugaG UUA-UGUGUC ----gAGG-G ACUGuu---- ---------- ---------- ----------
Stre.pneu.      --GACuugaG UUA-UGUGUC ----gAGG-G GCUGuu---- ---------- ---------- ----------
Stre.muta.      --AGUuugaG UUA-UGUAUU ----gUAA-C GGUGuu---- ---------- ---------- ----------
Myco.capr.      -uUuA----G UUA-AUUUuA ----GUUA-A AUAUuuu--- ---------- ---------- ----------
Urea.urea.      --uUU----G UUUuAUUAGu --uaUUAAcu Acacua---- ---------- ---------- ----------
Spir.kunk.      --UAGuu--G UCUaAUCCUA -uuAUUAA-A UAAU-gaa-- ---------- ---------- ----------
Myco.geni.      --GAUu---G UUUuGUGAUC -aauUGGA-A ACAAcaaga- ---------- ---------- ----------
Myco.pneu.      --GuUu---G UCUuAUGAuC -uaAAGUA-A GCGAga---- ---------- ---------- ----------
Myco.pulm.      --uuuu---g UUC-AAUuuu --uUCUAU-U AAAUcaac-- ---------- ---------- ----------
Clos.ther.      --gcCu--gC CCA-UggGcg --uUGGGU-u GagGg----- ---------- ---------- ----------
Ther.teng.      --UcCug--U CGC-UggGaG a--ACCGC-U gaGGg----- ---------- ---------- ----------
Clos.perf.      a-GUuu---G UCU-GUGgAC --gUUCUc-U GagGgaa--- ---------- ---------- ----------
Clos.botu.      --GCCu---G UUU-AUCGGC -gcUUAGA-g gaGGgaa--- ---------- ---------- ----------
Clos.diff.      --GCCu---G CCA-CUUGGC --gCUAUG-U gaGGugaga- ---------- ---------- ----------
Clos.acet.-1.pa.--GCUu---G UUU-GUAGGC --gUUUCA-U ggaGggaa-- ---------- ---------- ----------
Clos.acet.-2.   --GCUu---G UUU-GUAGGC --gUUUCA-U ggaGggaa-- ---------- ---------- ----------
Rumi.albu.      --GUG----G UCu-GUUUGC ---C-CgugC ggaGggaaac ggcgcaag-- ---------- ----------
Carb.hydr.      --GCCu---G CCG-GUAGGC --aC-CAA-U CGGGugaa-- ---------- ---------- ----------
support         --SSS----S SSS-SSSSSS -----SSS-S SSSS------ --S--SSSSS S-------SS SSSSSSS---

                ....|....| ....|....| ....|....| ....|....| ....|....| ....|....| ....|....|
                   635        645        655        665        675        685        695    
p-pre           CCCC--BBBB -----CCCCC --xxx--www w----fff-f ff------ee eee---dddd d---------
psknts          )))))))))) -))))))))) )))))))))) )--------- ---------- ---------- ----------
hel-10          1111--1111 -----11111 --111--111 1--------- ---------- ---------- ----------
hel-1           6666--5555 -----66666 --111--111 1----22222 22------22 2222222222 2---------
hel-x           ---------- ---------- --bbb--aaa a----ddd-d dd------cc ccc---bbbb b---------
Aqui.aeol.      ---------- ------ccug aaCAC--GGG C-uaaGCC-U GUagag--CC UC-----GGA Uguggcc-gc
Ther.mari.      ---------- --------aa aaCAC--GGG C-ugcGCU-C Ggagaag-CC CAG----GGG Ccu------c
Chlo.aura.-1.   ---------- ------ugaa acGAG--gGG C-uaaACC-U GUagau--GU CUG----CGG Ucua------
Chlo.aura.-2.pa.---------- ------ugaa acGAG--gGG C-uaaacc-u guagau--gu cug----cgg ucua------
Ther.ther.      ---------- ------gcga aaCGC--GGA C-uacGCG-C GUaga---GG CC-----CGC Cgua----ga
Dein.radi.      ---------- -------caa acAGU--GGG a-uacACA-C GUagac--GC A------CGC Ugga----cg
Porp.ging.      ---------- -------uuc caaCU--GAA AcuaaACA-U GUagaaa-GC AU----AUUG auu------c
Bact.frag.      ---------- -------cuu -aGgC--AAA GauaaGCA-U GUagaaa-GC UU----AUgA Uuu------c
Bact.fors.      ---------- --------ug aaGgC--GAA GauaaGCA-U GUagaaa-GC AA----AUUA guu------c
Tann.fors.      ---------- --------ug aaGgC--GAA GauaaGCA-w rUagaaa-GC AA----AUUA guu------c
Prev.inte.      ---------- -------cca aaGgC--UGA AauaaGCA-U GUagaaa-GC GU----AUgG Uuu------c
Cyto.hutc.      ---------- --------ug aaCAUc-CGG C-uaaGCA-U GUagaag-AU uC---gAUaG Ugg------c
Chlo.tepi.      ---------- ---------c caACCa-CCA GagauGAG-U GUgg----uA ACu---GCAU Cgag----ca
Chla.psit.      ---------- --------au uaCUA--GGG AcuaaGCA-U GUaga---GG UU-----AGC Aggg---agu
Chla.pneu.      ---------- --------aa uuCUA--GAA GauaaGCA-U GUaga---GG UU-----AGC Aggg---ag-
Chla.abor.      ---------- ---------c uaCUA--GGG AcuaaGCA-U GUaga---aG UU-----AGC Aggg---agu
Chla.trac.      ---------- ---------u acCUA--GGA AcuaaGCA-U GUaga---GG UU-----AGC Gggg---agu
Chla.muri.      ---------- --------ua uuCUA--GAA AcuaaGCA-U GUaga---GG UU-----AGC Gggg---agu
Osci.spec.      CCCAgaGGGU -uaaaUGGGC ---------- --uacGCC-U GugaaugaGC GGu----aGG Cgaau---ac
Anab.spec.      CCUUgaGGGU -cagaAAGGC ---------- --uaaACC-U GugaaugaGC GGG---G-GG Ucaau---ac
Chro.spec.      UUCUugGGAU -uauaAGAAC ---------- --uaaACC-U GUgaaugaGC AGA---aU-G Ucauu---au
Nost.punc.      CCUUgaGGGU -cagaAAGGC ---------- --uaaACC-U GugaaugaGC GGG---G-GG Ucaau---ac
Frem.dipl.      CCUugaGGGU -cagauAGGC ---------- --uaaACC-U GugaaugaGC GGA---G-GG Ucaau---ac
Plec.bory.      CUUCgaGGAU -uagaGAAGC ---------- --uaaACC-U GUgaaugaUU GAU---aGAG Cuaau---ac
Tric.eryt.      CUCUgaGGGU uaagaAGGGC ---------- --uaaaCC-U GUgaaugaGU GA----aGGG Ugaau---ag
Syne.spec.-1.   UCCUagGGcU --agaAGGAC ---------- --uaaACC-U GUgaaugaGC GG----aAAG Uuaau---ac
Syne.spec.-2.   CACaguGGGU -caaccGUGC ---------- --uaaGCC-U GugaacgaGC GG----aAAG uuacu---ag
Syne.spec.-3.   ---------- ---------- ---------- ---------- --------GG UgG---UCCa Cac-----ca
Syne.spec.-4.   ---------- ---------- ---------- ---------- --------GG UgA---UCCa Cac-----ca
Proc.mari.-2.   ---------- ---------- ---------- ---------- --------GG UgA---UCCa Cac-----ca
Proc.mari.-1.   ---------- ---------- ---------- ---------- --------GG UgA---UCUc aac-----cg
Syne.spec.-5.   ---------- ---------- ---------- ---------- --------nn nnn---nnnn ----------
Syne.spec.-6.   ---------- ---------- ---------- ---------- --------nn nnn---nnnn ----------
Cyan.para.cy.   ---------- ---------- ---------- --uauACU-U GUg----aAU AAAcgcAUAA Uu------ua
Porp.purp.cl.   ---------- ---------- --GAAuuGAu U-caaUUU-a Agg-uuagUA U-U---uUUU Gau-----uu
Odon.sine.cl.   ---------- ---------- --aGU-uGAA C-uaaACC-U GUgaacgaAU ACU---aUAA Uaaaa---uu
Pavl.luth.cl.pa.---------- ---------- ---------- ---------- ---------- ---------- ----------
Boli.spec.pl.   ---------- ---------- --AAU--GAA C-uaaACU-U GUgaacg-AU UA----AUUU Aucac---uu
Guil.thet.cl.   ---------- ---------- --UgUauGUU UcuaaACUuU GUgaaagaAU AGU---GGGc Ucc-----au
Thal.weis.cl.   ---------- ---------- --UUC--GGG C-uaaACC-U Guaa--acGC AaA-uacuAA Gaa-----au
Meso.viri.cl.   ---------- ---------- --GCA--AAG C-uaaACU-U GUgaauacaA AGA-agAGAU ca------aa
Recl.amer.mt.   ---------- ---------- ---------- -uaaaAUU-U AAau--uaUU UUu-uuAUAA G-------aa
Fibb.succ.      ---------- -----uuaaa --UAcgaAGG Gaac-aCU-U GuaggaacGU Ac--auGG-A Cg--------
Trep.dent.      ---------- -----ccacc ucGCA--CCG A-uaaGCC-U GUa--gacGC UU--cuGAuU Cc--------
Trep.pall.      ---------- ----cgcagu acGCA--CCG C-uaaACC-U GUa--ggcGC GC----AGCA Cu------cg
Borr.burg.      ---------- ------aaua aaAUA--CUA GauaaGCU-U GUa--gaaGC UUA---UAGU A-------uu
Rhod.palu.      ---------- ---------- --aCC--CGA C-uauGGA-A Aua---aauG GC----cGCC gcaau---aa
Magn.magn.-1.   ---------- ---------- --GGC--CGG C-uauGGC-G Aua---aacG UU----CUUC gcaau---aa
Magn.magn.-2.   ---------- ---------- ----C--CGG C-uauGAC-G Cua---aacG CC----AcAC ggaau---ag
Rhod.rubr.      ---------- ---------- ----C--CGG C-uauGAC-G Cua---aacC CU----UUAU ggaau---aa
Meth.exto.pa.   ---------- ---------- --GGC--CGG C-uauggc-g aua---aacg uu----cuuc gaaau---aa
Brad.japo.      ---------- ---------- ---GC--CGG C-uauGGA-A Aua---aacG GU----CGUC guaau---aa
Meso.loti.      ---------- ---------- --GaC--CGA C-uauGGC-G Aua---aauG Gg----CGAU gaaau---aa
Bruc.meli.      ---------- ---------- ---GC--CGA C-uauGGU-G Aua---aacG GA----CGGU guaau---aa
Sino.meli.      ---------- ---------- --GGG--CGG C-uauGGC-A Aua---aacG GG----CGAU gcaau---aa
Rhiz.legu.      ---------- ---------- --GGU--CGG C-uauGGC-G Aua---aauG AG----CGGU guaau---aa
Agro.tume.      ---------- ---------- ---CC--CGG C-uauGGC-G Aua---aacG GU----CGGU guaau---aa
Caul.cres.      ---------- ---------- --GCC--GaA C-uauGGG-G Aua---aacG CGc---ACGU aau-----aa
Sili.pome.      ---------- ---------- --cGG--GAA C-uauGGA-C Aua---aacG C-----GCUC guaau---aa
Rhod.spha.      ---------- ---------- --CCC--GGA C-uauGGA-C Aua---aacG Cgc---uCgU Cau-----aa
Rick.prow.      ---------- ---------- -------UAG C-uauAGU-A Aua---aacG UA----AUUU agaau---ag
Rick.typh.      ---------- ---------- -------UAG C-uauAGU-A Aua---aacG UA----AUUU agaau---ag
Rick.cono.      ---------- ---------- -------UAG C-uauAGU-A Aua---aacG UA----AUUU agaau---ag
Sphi.arom.      ---------- ---------- --GGC--CGG C-uauGGU-G Aua---aacu GCG---GCGU gcaau---ag
Ehrl.chaf.      ---------- ---------- -------GCA C-uauGGC-A Aua----aAG GCa---UCUU aaaau---ag
Wolb.spec.      ---------- ---------- -------GUA C-uauAGC-A Aua--aaaUU ACC----UUg Uaau----ag
Chro.viol.      ---------- -----uccaa auGACa-cGA C-uaaGUA-U GUa--gaaCU CA-----CUG Uag-----ag
Neis.gono.      ---------- --uuuucaaa uaGACa-CAA C-uaaGUA-U GUa--gaaCG C-----UUUG Uag-----ag
Neis.meni.-1.   ---------- --uuuucaaa uaGACa-CAA C-uaaGUA-U GUa--gaaCG C-----UUUG Uag-----ag
Neis.meni.-2.   ---------- --uuuucaaa uaGACa-CAA C-uaaGUA-U GUa--gaaCG C-----UUUG Uag-----ag
Uncu.u02-.      ---------- ------ccaa auAaGa-cGA C-uacACA-C GUa--gaaCU U-----GUAG Ugg-----ag
Nitr.euro.      ---------- ------uuaa auAACa-UGG C-uaaGUA-U GUa--gaaCU GU-----CUG Uag-----ag
Meth.glyc.      ---------- ------ucaa acAACa-cAG C-uaaGUA-U GUa--gaaCU GU-----CUG Ugg-----ag
Nitr.cryo.      ---------- ------uuaa agAGCa-UGG C-uaaGUA-U GUa--gaaCU GU-----CUG Uag-----ag
Uncu.u04-.pa.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Alca.faec.      ---------- --acuuaaaa uuAAU--UGA C-uacACA-U GUa--gaaCU GU-----CUG Ugg-----ac
Bord.para.      ---------- ----uccaaa uaGAU--CGA C-uaaGCA-U GUa--gaaCU G-----GUUG cgg-----ag
Bord.pert.      ---------- ----uccaaa uaGAU--CGA C-uaaGCA-U GUa--gaaCU G-----GUUG cgg-----ag
Bord.bron.am.   ---------- ----uccaaa uaGAU--CGA C-uaaGCA-U GUa--gaaCU G-----GUUG cgg-----ag
Coma.test.      ---------- ------uuaa aaCAGa-GCA C-uaaACA-U GUa--gauCU GU----CCGG cg------aa
Hydr.pall.      ---------- ------ccaa auCAGa-cGG C-uacACA-U GUa--gaaCU GCU----CGa aa------aa
Vari.para.      ---------- ------ucaa aaCAGa-UCA C-uaaACA-U GUa--gaaCU GC----GCGA Ug------aa
Burk.pseu.      ---------- ------ucaa auGACa-GAA C-uaaACA-U GUa--gaaCU G-----GUCG Ugg-----ac
Burk.mall.      ---------- ------ucaa auGACa-GAA C-uaaACA-U GUa--gaaCU G-----GUCG Ugg-----ac
Burk.cepa.      ---------- ------ucaa aaGACu-GGA C-uaaACA-U GUa--gaaCU A-----GUCG Ugg-----ag
Burk.fung.      ---------- ------ucaa auGACa-GAA C-uaaACA-U GUa--gaaCU G-----GUCG Uag-----ag
Alca.eutr.      ---------- ------ucaa auGACa-GAA C-uaaGUA-U GUa--gaaCU Cu-----CUG Ugg-----ag
Rals.eutr.      ---------- ------ucaa auGACa-GAA C-uaaGUA-U GUa--gaaCU CU-----CUG Ugg-----ag
Rals.meta.      ---------- ------ucaa auGACa-GAA C-uaaGUA-U GUa--gaaCU CU-----CUG Ugg-----ag
Rals.sola.      ---------- ------ucaa auGACu-GAA C-uaaGUA-U GUa--gaaCG CU-----CUG Uag-----ag
Rals.pick.      ---------- ------ucaa auGACa-GAA C-uaaGUA-U GUa--gaaCU CU-----CUG Ugg-----ag
Acid.ferr.-1.   ---------- -----gccaa aaGAC--AaA C-uacGCA-U GUa----gau CCG---GuGG Ucu-----ag
Acid.ferr.-2.   ---------- -----gccaa aaGAC--AaA C-uacGCA-U GUa----gau CCG---GuGG Ucu-----ag
Fran.tula.      ---------- ----cucaaa uaGAUu-AGC C-uaaGCA-U GUa----gau CCa---aAGA Ucu-----ag
Dich.nodo.      ---------- -----ccuaa uuAACu-GCU C-uaaACA-U GUa----guA CCa---aaAG uua-----ag
Xyle.fast.-1.   ---------- -----accua acGGCg-AGG a-uaaGCA-U GUa----ggG CCG---GgGA Ugg-----ag
Xyle.fast.-2.   ---------- -----accua acGGCc-AGG a-uaaGCA-U GUa----ggG CCG---GgGA Ugg-----ag
Xyle.fast.-3.   ---------- -----accua acGGCc-AGG a-uaaGCA-U GUa----ggG CCG---GgGA Ugg-----ag
Xant.camp.      ---------- -----aucua acGGa--GGG a-uaaGCA-U GUa----guG CUG---GgGA Ugg-----ag
Xant.axon.      ---------- -----aucua acGGa--gGG C-uaaGCA-U GUa----guG CUG---GgGA Ugg-----ag
Legi.pneu.      ---------- -----uucaa aaGACa-aGG C-uauGCA-U GUa----gaG CUa---aaGG cag-----ag
Coxi.burn.      ---------- -------uca uaGACg-aUG C-uaaGCA-U GUa----guG UCa---acGG cgg-----au
Meth.caps.      ---------- ------ucaa uaGAG--UGG a-uacGCA-U GUa----gaA CCg---auGG cag-----ag
Uncu.u01a.      ---------- -------cca aaGAUc-AGG C-uaaGCA-U GUa----gau CUg---aGGG cuac----ga
Uncu.u01b.      ---------- -------cca aaGAUc-AGG C-uaaGCA-U GUa----gau CUg---aGGG cuac----ga
Acin.ADP1.      ---------- ------acaa uaGACgauAu C-uaaGCA-U GUa----guA UUc---ucGA Gugu----ag
Micr.degr.      ---------- ------ucaa uaAGC--GGu UcuaaGCA-U GUa----gaG CUg---aCGG cgg-----ag
Pseu.aeru.      ---------- ------ucag uaGAGc-UGG C-uaaGCA-U GUa----gaa CCg---aUAG cgg-----aa
Azot.vine.      ---------- ------ucaa uaGACa-GGG C-uaaGCA-U GUa----gaa CCg---aUAG cgg-----ag
Pseu.puti.      ---------- ------ucag uaGACa-cGG C-uaaGCA-U GUa----guA CCg---acaG cgg-----ag
Pseu.fluo.-1.   ---------- ------uuaa uaGACa-cGG C-uacGCA-U GUa----guA CCg---acaG cgg-----ag
Pseu.fluo.-2.   ---------- ------uuaa uaGAAa-cGG C-uacGCA-U GUa----guA CCg---acAG cgg-----ag
Pseu.syri.-1.   ---------- ------uuaa uaGACa-cGG C-uacGCA-U GUa----guA CCg---acAG cgg-----ag
Pseu.syri.-2.   ---------- ------uuaa uaGACa-cGG C-uaaGCA-U GUa----guA CCg---acAG cgg-----ag
Mari.hydr.      ---------- -----ucaau agaAGg-aca C-uaaGCA-U GUa----g-A CCu---CAAG Gccu----ag
Pseu.halo.      ---------- ------uuaa auGACa-AuA C-uaaACA-U GUa----guA CCg--aCGGu Cg------ag
Uncu.ww11.      ---------- -------uaa aaGAG--AGA C-uaaGCA-U GUa----gug CCu---UGGa ugu-----ag
Shew.putr.      ---------- -------caa uaGAA--AGA C-uaaGCA-U GUa----gcg CCu---UGGa ugu-----ag
Colw.spec.      ---------- ------auaa auGAG--CGA C-uaaGCA-U GUa----guA CCg---aGAa cgu-----ag
Phot.phos.      ---------- -------aua aaGAU--UGA C-uaaACA-U GUa----gcg CCA---UcuG Uuag----ac
Vibr.chol.      ---------- -------uua aaGAU--CGA C-uaaGCA-U GUa----guA CCa---aAGA Uga-----au
Aero.salm.      ---------- -------gua aaGAG--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Uncu.vlw3.      ---------- -------gua aaGAG--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Uncu.vlw4.      ---------- -------gua aaGAG--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Uncu.vls1.-3.   ---------- -------gua aaGAG--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Uncu.rca3.      ---------- -------gua aaGAG--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Uncu.vls1.-4.   ---------- -------gua aaGAG--uGA C-uacGCA-U GUa----guA CCg---aGGa Ugu-----ag
Uncu.ww-9.      ---------- -------gua aaGAG--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Uncu.ww10.      ---------- -------gua aaGAG--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Uncu.vlw5.      ---------- -------gua aaGAG--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Uncu.vlw6.      ---------- -------gua aaGAG--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Uncu.rca4.      ---------- -------gua aaGAUu-CGA C-uaaGCA-U GUa----guA CUg---aGGa Ugu-----ag
Uncu.rca7.      ---------- -------gua aaGAUu-CGA C-uaaGCA-U GUa----guA CUg---aGGa Ugu-----ag
Uncu.rca8.      ---------- -------gua aaGAUu-CGA C-uaaGCA-U GUa----guA CUg---aGGa Ugu-----ag
Uncu.lem1.      ---------- -------gua aaGAUu-CGA C-uaaGCA-U GUa----guA CUg---aGGa Ugu-----ag
Uncu.lem2.      ---------- -------gga aaGaUu-CGa C-uaaGcA-U GUa----guA CUg---aGGa Ugu-----ag
Past.mult.      ---------- -------uua aaGACg-AGA C-uaaACG-U GUa----guA CUg---aaGG Uag-----ag
Mann.haem.      ---------- -------uua aaGACu-AGA C-uaaACA-U GUa----guA CUg---aaGG Uag-----ag
Haem.somn.      ---------- -------uua aaGAUu-AGA C-uaaACG-U GUa----ggA CUg---aaGG Uag-----ag
Haem.infl.      ---------- -------uua aaGACg-AGA C-uaaACG-U GUa----guA CUg---aaGG Uag-----ag
Haem.ducr.      ---------- -------uua aaGACc-AGA C-uaaACG-U GUa----guA CUg---aaGA Uag-----ag
Acti.pleu.      ---------- -------uua aaGACc-AGA C-uaaACG-U GUa----guG CUg---aaGA Ugg-----ag
Acti.acti.      ---------- -------uua aaGACc-GGA C-uaaACG-U GUa----guG CUa---acGG Cag-----ag
Buch.aphi.      ---------- --------ua aaGAA--AAA C-uaaGCA-U GUa----guA UcUu--UAUU Uau-----ag
Buch.APS-.      ---------- ----ucaaua aaGAAa-AAA C-uaaGCA-U GUa----ggG CUU---UAUU agu-----ag
Esch.coli.-1.   ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Esch.coli.-2.   ---------- -------gua aaGAC--urA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Esch.coli.-3.   ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guA CCg---aGGa cgu-----ag
Prov.rett.      ---------- -------uca aaGAC-uAGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Salm.typh.-1.   ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Salm.typh.-2.   ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Salm.ente.-1.   ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Salm.ente.-2.   ---------- -------gua aaGAC--aGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Shig.flex.      ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Shig.dyse.      ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guA CCg---aGGa cgu-----ag
Salm.para.      ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Erwi.caro.      ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guA CCg---acGG Uag-----ag
Erwi.chry.      ---------- -------gua aaGAC-cAGA C-uaaGCA-U GUa----guA CCg---acGG Ugu-----ag
Kleb.pneu.      ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guG CCg---aGGa Ugu-----ag
Uncu.rca1.      ---------- -------gua aaGAUu-GGA C-uaaGCA-U GUa----guG CCg---acGG Ugu-----ag
Uncu.vls1.-1.   ---------- -------gua aaGAU--GGA C-uaaGCA-U GUa----gug CCg---AcGG Ugu-----ag
Uncu.vls3.      ---------- -------gua aaGAU--GGA C-uaaGCA-U GUa----gug CCg---AcGG Ugu-----ag
Uncu.vls4.      ---------- -------gua aaGAG--uGA C-uaaGCA-U GUa----gua CCg---AGGa Ugu-----ag
Uncu.ww-1.      ---------- -------gua aaGaC--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Uncu.rca2.      ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guG CCg---aGGa Ugu-----ag
Uncu.ww-2.      ---------- -------gua aagAC--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Uncu.ww-3.      ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Uncu.ql-1.      ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guG CCg---aGGa Ugu-----ag
Uncu.ww-4.      ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guG CCg---aGGa Ugu-----ag
Uncu.vls1.-2.pa.---------- -------gua aaGsC--uGA C-uaagca-u gua----gug gcg---agga ugu-----ag
Uncu.vls5.      ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Uncu.fs-1.      ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Uncu.vls6.      ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guA cCg---aGGa Ugu-----ag
Uncu.fs-2.      ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Uncu.ww-5.      ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guG CCg---aGGa Ugu-----ag
Uncu.ww-6.      ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----gcG CCg---aGGa Ugu-----ag
Uncu.vlw1.      ---------- -------gua aaGAC--aGA C-uuaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Uncu.vls7.      ---------- -------gua aaGaC--aGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Uncu.vls8.      ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Uncu.vls9.      ---------- -------gua aaGAU--uGA C-uaaGCA-U GUa----gug CCg---AcGG Ugu-----ag
Uncu.vlw2.      ---------- -------gua aaGAUa-uGA C-uaaGCA-U GUa----gug CCg---AcGG Ugu-----ag
Uncu.ww-7.      ---------- -------gua aaGAcu-GGA c-uaaGCA-U GUa----guG CCg---aGGa Ugu-----ag
Uncu.ww-8.      ---------- -------gua aaGAC--uGA C-uaaGCA-U GUa----guA CCg---aGGa Ugu-----ag
Yers.ente.      ---------- -------gua auGACu-GGA C-uaaGCA-U GUa----guG CCg---acGG cgu-----ag
Yers.pest.      ---------- -------gua auGAUu-GGA C-uaaGCA-U GUa----guG CCg---acGG Ugu-----ag
Desu.vulg.      ---------- ---------- ugUaCu-CGA CcuaaGCC-U GUa---gacG CU----UCG- Ugugg---aa
Desu.desu.      ---------- ---------- caUaCu-UGA CcuaaACC-U GUa---gaUG CU----uCG- Ugugg---aa
Geob.sulf.      ---------- ---------- aaUCC--UGG UauaaGCA-U GUa---gacG CCu---UCGG Ugu-----au
Geob.meta.      ---------- ---------- aaUCC--UGG CauaaGCA-U GUa---gacG CCu---UcuG Ugu-----au
Heli.pylo.      ---------- ---aaaacca acCAAu-UUU C-uaaGCAuU GUa---gaaG UU----UGUG Uuuagggcaa
Camp.jeju.      ---------- --------ua guCAUcuUUg C-uaaGCA-U GUa---gagG UCuuugUGGG a--------u
Fuso.nucl.-1.   ---------- ------uuua auaGU--AAA C-uaaACU-U GUa---gaaG CU----UAUG Gucau---ua
Fuso.nucl.-2.   ---------- ------uuua auaGU--AAA C-uaaACU-U GUa---gaaG CU----UAUG Gucgu---ua
Fuso.nucl.-3.   ---------- ------ucua auaGU--AAA C-uaaACU-U GUa---gaaG CU----UAUA Gucau---ua
Stre.coel.      ---------- -------auc gaaGC--GGA C-ugcACA-C Gga---gaag C-----CCUG auuc----cg
Ther.fusc.      ---------- ------acgc ugaGC--AGA C-ugcGCC-C Gga---gaag C-----CCUG Cugc----ag
Trop.whip.      ---------- ----aacggu uuUAG--CGG A-uacACC-C GUa---gaag U-----CACG Gg---cucca
Myco.lepr.      ---------- ------aggc auaGC--GAA C-uacGCA-C Gga---gaag C-----CUUG Aggg---aaa
Myco.aviu.      ---------- ------aggc auaGC--GAA C-ugcGCA-C Gga---gaag C-----CUUG Aggg----aa
Myco.tube.      ---------- ------aggc auaGC--GAA C-ugcGCA-C Gga---gaag C-----CUUG Aggg----aa
Myco.bovi.      ---------- ------aggc auaGC--GAA C-ugcGCA-C Gga---gaag C-----CUUG Aggg----aa
Myco.mari.      ---------- ------agac auaGC--GGA C-ugcGCA-C Gga---gaag C-----CUUG Aggg----aa
Myco.smeg.      ---------- ------agac auaGC--GAA C-ugcGCA-C Gga---gaag C-----CUcG Agga----ca
Cory.diph.      ---------- ---agaucca cgcGC--GAA C-ugcGCA-C Gga---gaag CC----CUAG Cga-----gg
Cory.glut.      ---------- ---agaucuu ugcGC--GAA C-ugcGCA-C Gga---gaag CC----CUGG Cga-----gg
Desu.hafn.      ---------- ---------a acGGa--gCG C-uaaGCA-U GUa---guGC CG----GG-G Augg----ag
Deha.ethe.      ---------- --------aa uagacg-GaU aauccugU-a GUa-----GA UCCu--gGGU Ca-------c
Heli.mobi.      ---------- --------aa acGaC--AGA C-uacGCu-c GUa---guGu CCUuugugGG Ca--------
Baci.halo.      ---------- ----ugcgaa uaCAG--UGA C-uacGCU-C GUa---gaaG CU----UAAG Uacuc---gu
Baci.stea.      ---------- ----gcgaaa uaUAC--CGA C-uacGCU-C GUa---gaUG CU----UAAG Uggc----ga
Baci.mega.      ---------- ----gaucaa uaUGC--CAA C-uacACU-C GUa---gacG CU----UAAG Uggc----ca
Baci.subt.      ---------- ----cauaaa uaUGC--aGG C-uacGCU-C G-a---gacG CU----UAAG Uuaau--cga
Stap.sapr.      ---------- ------ccua uuGAU--AGA C-uacGCA-C GUa-----ga AG--ugCUAG Uauc----ag
Stap.epid.      ---------- -------uua ucAAU--AAA C-uacACA-C GUa-----ga AA--gaUuuG Uauc----ag
Stap.aure.-1.   ---------- -------cua ucGAU--AAA C-uacACA-C GUa-----ga AA--gaUGuG Uauc----ag
Stap.aure.-2.   ---------- -------uuu ucGAU--AAA C-uacACA-C GUa-----ga AA--gaUGuG Uauc----ag
Stap.aure.-3.   ---------- -------cuu ucGAU--AAA C-uacACA-C GUa-----ga AA--gaUGuG Uauc----ag
Stap.aure.-4.   ---------- -------cuu ucGAU--AAA C-uacACA-C GUa-----ga AA--gaUGuG Uauc----ag
Stap.aure.-5.   ---------- -------cuu ucGAU--AAA C-uacACA-C GUa-----ga AA--gaUGuG Uauc----ag
Stap.xylo.      ---------- ------ccua uuGAU--AGA C-uacGCA-C GUa-----ga AG--ugCUAG Uauc----ag
Baci.anth.      ---------- ----ugcuaa uaUAU--CGA C-uacACU-C GUa---gaAG CU----UAAG Ugcc----ga
List.inno.      ---------- ----ugcuaa uaCGG--UGA C-uacGCU-C GUa---gauA UU----CAAG Ugcc----ga
List.mono.      ---------- ----ugcuaa uaCGG--UGA C-uacGCU-C GUa---gauA UU----UAAG Ugcc----ga
List.gray.-1.   ---------- ----ugcuaa uaCGG--UGA C-uacGCU-C GUa---gauA UU----CAAG Ugcc----ga
List.gray.-2.   ---------- ----uccaaa uaCGG--Caa C-uacGCU-C GUa---gauG CU----CAAG Ugcc----ga
List.ivan.      ---------- ----ugcuaa uaCGG--UGA C-uacGCU-C GUa---gauA UU----UAAG Ugcc----ga
List.seel.      ---------- ----uacuaa uaCGG--UGA C-uacGCU-C GUa---gauA UU----UAAG Ugcc----ca
List.wels.      ---------- ----ugcuaa uaCGG--UGA C-uacGCU-C GUa---gauA UU----UAAG Ugcc----ga
Leuc.mese.      ---------- ----uacaaa uaAUA--GCc C-uauAAA-C GUa---gauA UU----GGUG Uauc----gg
Leuc.pseu.      ---------- ----uucaaa ugAUA--GCA C-uauAAG-C GUa---ggcG cC----AAUG Uauc----gg
Leuc.lact.      ---------- ----cuuaaa ugACA--ACA C-uauAAG-C GUa---gaGG UU----CAUG Uacc----gg
Lact.delb.      ---------- ----cucaaa ugaGu--UGA C-uauGAA-C GU------AG aUuuu-UAAG Uguc----ga
Lact.gass.      ---------- ----uuuaag uaAUA--UAA C-uauGAU-C GU------AG ag-guuAACG acgg----aa
Lact.sake.      ---------- ----ucuaaa uaGUU--CGA C-uauGAG-U GU------AG ag-auugACG Uggc----aa
Lact.helv.      ---------- ----uucaag uaAUA--UAA C-uauGAU-C GUa---gaGG UC----AGUG acgg----aa
Lact.gall.      ---------- ----uucaag uaAUA--UAA C-uauGAU-C GUa---gaGu UC----AGUG acgg----aa
Lact.plan.-1.   ---------- ----uuuaaa uaGUA--UGA a-uauGAG-C GUa---gauA UC----cGAg gggc----aa
Carn.pisc.pa.   ---------- ----ccuuaa uaGCa--UGA C-uaugaa-c gua---gaug uc----uaag ugcc----ga
Ente.faec.-1.   ---------- -----uuuaa auGAG--UGu C-uauGAA-C GUa---gaGA UU----UAAG Uggc----aa
Ente.faec.-2.   ---------- -----cuuaa auGAG-uUGA C-uauGAA-C GUa---gauu UU----UAAG Uggc----ga
Ente.dura.      ---------- -----cucaa auGAG-uUGA C-uauGAA-C GUa---gauu UU----UAAG Uguc----ga
Oeno.oeni.      ---------- ------auua cuUGU--UAA C-uaugAG-C GUa---gauA UU----UAUG Ugauu---gg
Lact.lact.-1.   ---------- ---aaauuug agAaa--gUc C-uauGGU-U GUa---gacG UU----gAUG Uagc----aa
Lact.lact.-2.   ---------- ---aaauuug agAaa--gUc C-uauGGU-U GUa---gacG UU----gAUG Uagc----aa
Lact.lact.-3.   ---------- ---aaauuug agAaa--gUc C-uauGGU-U GUa---gacG UU----gAUG Uagc----aa
Lact.lact.-4.   ---------- ---aaauuug agAaa--gUc C-uauGGU-U GUa---gacG UU----gAUG Uagc----aa
Lact.garv.      ---------- ---aaacuag agAaa--gUc C-uauGGU-U GUa---gacG UU----gAUG Uagc----aa
Lact.plan.-2.   ---------- ----aaauuu agAca--gUc CcuauGAU-U GUa---gacG CU----gAUA Uagc----aa
Pedi.pent.      ---------- ----uuuaag uaGUA--UGa a-uauGAA-U GUa---gauG UC----AUGG Uggc----ga
Lact.raff.      ---------- ----aaauuu agAca--gUc CcuauGAU-U GUa---gacG CU----gAUA Uagc----aa
Stre.equi.      ---------- ----aaagua agACA--UAA CcuauGGU-U GUa---gacA AA----UAGG Uuag----ca
Stre.uber.      ---------- ----aaaaca agACA--UAA CcuauGGU-U GUa---gacA AA----UAUG Uugg----ca
Stre.pyog.      ---------- ----aaauga agACA--UAA CcuauGGA-C GUa---gacA AA----UAUG Uugg----ca
Stre.suis.pa.   ---------- ---------- ---------- ---------- ---------- ---------- ----------
Stre.ther.      ---------- ---aaaugaa agACA--UAA CcuauGGU-C GUa---gacG AA----UAUG Uugg----ca
Stre.gord.      ---------- ----aaaaca auACA--UAG CcuauGGU-U GUa---gacA AA----UGUG Uugg----ca
Stre.miti.      ---------- ----aaacga auACA--UAA CcuauGGU-U GUa---gacA AA----UAUG Uuag----ca
Stre.pneu.      ---------- ----aaaaua auACA--UAA CcuauGGU-U GUa---gacA AA----UAUG Uugg----ca
Stre.muta.      ---------- ----aaauaa acACA--UAA CcuauAGU-U GUa---gacA AA----UGGG Uuag----ca
Myco.capr.      ---------- ----aauuag aaAAU--UAA C-uaaAC--U GUa---gaaa GUA---UGUA Uua-----au
Urea.urea.      ---------- -------uuu uuAAUa-AAA C-uaaAC--U GUa---gauA UUA---uuAA Uu------au
Spir.kunk.      ---------- ----aaaaag auGAUu-AGA C-uaaAC--U GUa---gaaG AUA---UUAG aau-----gu
Myco.geni.      ---------- ----caaaaa ucCACa-AAA C-uaaAA--U GUa---gaaG CUG---UUUG Uug----ugu
Myco.pneu.      ---------- ----cauuaa aaCAUa-AGA C-uaaAC--U GUa---gaAG CUG---UUUU acc----aau
Myco.pulm.      ---------- ----aauuaa aaAUU--GGA a-uaaAC--U GUa---gauU UAU---AAGc auugu----g
Clos.ther.      ---------- ----aauuuu uaaaAcaUGG GcugcACC-C Gga---gaaG CUcuu-gUGG au-------a
Ther.teng.      ---------- -----aaagc uaaaAcaGCG AcugcGCU-C Gga---gaaG CUU---UUAC Cggg-----a
Clos.perf.      ---------- ----uuuuaa aaCACa-AGA C-uacACU-C GUa--gaaaG UC----UUAc Uggu-----c
Clos.botu.      ---------- ----uguaaa agGAU--AAA C-ugcACU-C Gga---gaUg CC----CAGG Gguu----gc
Clos.diff.      ---------- ----uauuag ugAAGu-UGG C-uaaGCA-U GUa---gauG Ca---gCAAG gaa-----aa
Clos.acet.-1.pa.---------- ----uguuaa aaUAC--AAA C-ugcacu-c gga---gaug cuu---aaau gaa-----ac
Clos.acet.-2.   ---------- ----uguuaa aaUAC--AAA C-ugcACU-C Gga---gaUg CUU---AAAU Gaa-----ac
Rumi.albu.      ---------- ----ccgaaa auAACc-cGA C-uagACU-C GUa---gaa- AUU--cgCGU Gaa-----ug
Carb.hydr.      ---------- ----agcaaa aaUAC--CGG C-ugcCCU-C Gga---gaaG CUU-ucGGUU C-------uu
support         ------SSSS ---------- --SSS--SSS S----SSS-S SS-------S SS-----SSS S---------

                ....|....| ....|....| ....|....| ....|....| .
                   705        715        725        735      
p-pre           bbbbbbbb-- --DDDDD--- ----DDDDD- aaaaaaa--- -
psknts          ---------- ---------- ---------- ---------- -
hel-10          ---------- --11111--- ----11111- ---------- -
hel-1           22222222-- --22222--- ----22222- 1111111--- -
hel-x           aaaaaaaa-- ---------- ---------- ---------- -
Aqui.aeol.      cGUCCUCGga c-GCGGGuuc gauuCCCGC- CGCCUCCacc a
Ther.mari.      CAUCUUCGga c-GGGGGuuc gaauCCCCC- CGCCUCCacc a
Chlo.aura.-1.   GCUUUCUgga c-ggggnnnn nnnnnnnnn- nnnnnnnnnn n
Chlo.aura.-2.pa.gcuuucugga c-GGGGGuuc gacuCCCCC- caucuccacc a
Ther.ther.      GACCUUCGga c-GGGGGuuc gacuCCCCC- CACCUCCacc a
Dein.radi.      gaCCUUUGga c-GGCGGuuc gacuCCGCC- CACCUCCacc a
Porp.ging.      CAUGUuUGga c-GAGGGuuc aauuCCCUC- CAGCUCCacc a
Bact.frag.      CUCGUuUGga c-GAGGGuuc gaauCCCUC- CAGCUCCacc a
Bact.fors.      CUCGUuUGga c-GAGAGuuc gaauCUCUC- CAGCUCCacc a
Tann.fors.      CUCGUuUGga c-GAGAGuuc gaauCUCUC- CAGCUCCacc a
Prev.inte.      CUUGUgCGga c-CGGAGuuc gacuCUCCG- CAGGUCCacc a
Cyto.hutc.      CUUcUCUGga c-GAGAGuuc gaauCUCUC- CGACUCCacc a
Chlo.tepi.      gUGUCCUGga c-GCGGGuuc aaguCCCGC- CAUCUCCacc a
Chla.psit.      UUaCUAAGga c-GAGAGuuc gaguCUCUC- CACCUCCacc a
Chla.pneu.      UUUgUAAGga c-GAGAGuuc gaguCUCUC- CACCUCCacc a
Chla.abor.      UUaCUAAGga c-GAGAGuuc gaguCUCUC- CACCUCCacc a
Chla.trac.      UUaCUAAGga c-GAGAGuuc gacuCUCUC- CACCUCCacc a
Chla.muri.      UUaCUAAGga c-GAGAGuuc gaauCUCUC- CACCUCCacc a
Osci.spec.      CUCUGCUaca c-agcannnn nnnnnnnnn- nnnnnnnnnn n
Anab.spec.      CCAAUUUGga c-AGCAGuuc gacuCUGCU- C-GAUCCacc a
Chro.spec.      CCAGUCUgga c-agcannnn nnnnnnnnn- nnnnnnnnnn n
Nost.punc.      CCAAUUUGga c-AGCAGuuc gacuCUGCU- CGGAUCCacc a
Frem.dipl.      CCAAUUUgga c-agcannnn nnnnnnnnn- nnnnnnnnnn n
Plec.bory.      CCAGUUUgga c-acggnnnn nnnnnnnnn- nnnnnnnnnn n
Tric.eryt.      CCAUUUUGga c-AUGGGuuc gacuCCCAU- AUGCUCCacc a
Syne.spec.-1.   CCAGUUUGga c-AGCAGuuc aauuCUGCU- CGGCUCCacc a
Syne.spec.-2.   UCAAUGCGga c-AGCGGuuc gauuCCGCU- CAGCUCCacc a
Syne.spec.-3.   GUGUCUCGga c-AGCGGuuc gauuCCGCU- CAGCUCCacc a
Syne.spec.-4.   GUGUUUCGga c-AGCGGuuc gauuCCGCU- CAGCUCCacc a
Proc.mari.-2.   GUGUCUCGga c-AGCGGuuc gauuCCGCU- CAGCUCCacc a
Proc.mari.-1.   AUGUUUCGga c-AGCGGuuc gauuCCGCU- CAACUCCacc a
Syne.spec.-5.   GUGUUUCGga c-AGCGGuuc gauuCCGCU- CAGCUCCacc a
Syne.spec.-6.   GUGUCUCGga c-AGCGGuuc gauuCCGCU- CAGCUCCacc a
Cyan.para.cy.   AAAAAACGga c-GUGGGuuc aaauCCCAC- CAGCUCCacc a
Porp.purp.cl.   UUACAAUGga c-GUGGGuuc aaguCCCAC- CAGCUCCacc a
Odon.sine.cl.   UUUAGAUGga c-GUGGGuuc gacuCCCAU- CAGCUCCacc a
Pavl.luth.cl.pa.---------- ---------- ---------- ---------- -
Boli.spec.pl.   UUAUAAUgga c-guggnnnn nnnnnnnnn- nnnnnnnnnn n
Guil.thet.cl.   UUauaAUGaa c-GUGGGuuc aaauCCCAC- CAGCUCCacc a
Thal.weis.cl.   UUUAGAUGga c-AUGGGuuc aauuCCCAU- CAGUUCCacc a
Meso.viri.cl.   CUAAAGCGga c-GCGGGuuc aaaaCCCGC- CAGCUCCacc a
Recl.amer.mt.   UgACUAUGga a-CCGAGggc ggauCUCGG- CAUCUCCacc a
Fibb.succ.      UGAUUUUGga c-AGGGGuuc gacuCCCCU- CACCUCCacc a
Trep.dent.      CUUUUCGGga c-GGGGGuuc aauuCCCCC- CAUCUCCacc a
Trep.pall.      cUCUUUAGga c-GGGGGuuc gauuCCCCC- CAUCUCCacc a
Borr.burg.      AUUUUUAGga c-GCGGGuuc aauuCCCGC- CAUCUCCacc a
Rhod.palu.      aCCaUUCGga c-CCGGGggc gguaCCCGG- CGCCUCCacc a
Magn.magn.-1.   aCCUaUCGga c-CCGGGggc gguaCCCGG- CGCCUCCacc a
Magn.magn.-2.   aCGuUACGga c-CCGGGggc gguaCCCGG- CGCCUCCacc a
Rhod.rubr.      GCGuUGUGga c-CCGGGggc gguaCCCGG- CGCCUCCacc a
Meth.exto.pa.   accuaucgga c-CCGGGggc gguaCCCGG- CGCCUCCacc a
Brad.japo.      aCCaUUCGga c-CCGGGggc gguaCCCGG- CGCCUCCacc a
Meso.loti.      GCCgUUCGga c-CCGGGggc gguaCCCGG- CGCCUCCacc a
Bruc.meli.      ACCCaUUGga c-CCGGGggc gguaCCCGG- CGCCUCCacc a
Sino.meli.      aCCCaUUGaa c-CCGGGggc gguaCCCGG- CGCCUCCacc a
Rhiz.legu.      ACCUaUUGga c-CCGGGggc gguaCCCGG- CGCCUCCacc a
Agro.tume.      aCCUaUUGga c-CCGGGggc gguaCCCGG- CGCCUCCacc a
Caul.cres.      GCGgaCUGga c-CCGGGugc gauuCCCGG- CGGCUCCacc a
Sili.pome.      GCGguUCGga c-CCGGGggc gguaCCCGG- CGGCUCCacc a
Rhod.spha.      GCGgaUCGga c-CCGGGggc gguaCCCGG- CGGCUCCacc a
Rick.prow.      AGGUuGCGga c-UCGGGggc aguaCCCGA- CGCCUCCacc a
Rick.typh.      AGGUuGCGga c-ucgggggc aguacccga- CGCCUCCacc a
Rick.cono.      AGGUuGCGga c-UCGGGggc aguaCCCGA- CGCCUCCacc a
Sphi.arom.      GCACaGCGga c-CCGGGggc gguaCCCGG- CGGCUCCacc a
Ehrl.chaf.      AUGUAUuGga c-CCGAGggc agugCUCGG- CAUCUCCacc a
Wolb.spec.      GUGUAUuGga c-CCGAGggc aguaCUCGG- CGUCUCCacc a
Chro.viol.      GACUUUCGga c-gcGGGuuc aacuCCCnn- nnnnnnnnnn n
Neis.gono.      GACUUUCGga c-GGGGGuuc gauuCCCCC- CGCCUCCacc a
Neis.meni.-1.   GACUUUCGga c-GGGGGuuc gauuCCCCC- CGCCUCCacc a
Neis.meni.-2.   GACUUUCGga c-GGGGGuuc gauuCCCCC- CGCCUCCacc a
Uncu.u02-.      GAUUUGCgga c-guggnnnn nnnnnnnnn- nnnnnnnnnn n
Nitr.euro.      GACUUGCGga c-GCGGGuuc aauuCCCGC- CGCCUCCacc a
Meth.glyc.      GGCUUgCGga c-gggGGuuc gauuCCnnn- nnnnnnnnnn n
Nitr.cryo.      GACUUGCGga c-gcGGGuuc aacuCCCnn- nnnnnnnnnn n
Uncu.u04-.pa.   ---------- ---------- ---------- ---------- -
Alca.faec.      GGCUUgCGga c-ggGGGuuc gauuCCCnn- nnnnnnnnnn n
Bord.para.      GGCUUGCGga c-GGGGGuuc aauuCCCCC- CGGCUCCacc a
Bord.pert.      GGCUUGCGga c-GGGGGuuc aauuCCCCC- CGGCUCCacc a
Bord.bron.am.   GGCUUGCGga c-GGGGGuuc aauuCCCCC- CGGCUCCacc a
Coma.test.      GGCUUACGga c-GCGGGuuc aauuCCCGC- CGGCUCCacc a
Hydr.pall.      GGCUUGCGga c-ggGGGuuc aacuCCCnn- nnnnnnnnnn n
Vari.para.      GGCUUGCGga c-ggGGGuuc aacuCCCnn- nnnnnnnnnn n
Burk.pseu.      cGCUUCUGga c-GCGGGuuc gauuCCCGC- CGCCUCCacc a
Burk.mall.      cGCUUCUGga c-GCGGGuuc gauuCCCGC- CGCCUCCacc a
Burk.cepa.      cGCUUCUGga c-GCGGGuuc gauuCCCGC- CGCCUCCacc a
Burk.fung.      uGCUUCUGga c-GCGGGuuc gauuCCCGC- CGCCUCCacc a
Alca.eutr.      GGcUUACGga c-GCGGGuuc gauuCCCGC- CGGCUCcacc a
Rals.eutr.      GGCUUACGga c-GCGGGuuc gauuCCCGC- cggcuccacc a
Rals.meta.      GGCUUGCGga c-GCGGGuuc gauuCCCGC- CGGCUCCacc a
Rals.sola.      GACUUGCGga c-GCGGGuuc gauuCCCGC- CGGCUCCacc a
Rals.pick.      GGCUUgCGga c-gcGGGuuc gauuCCCnn- nnnnnnnnnn n
Acid.ferr.-1.   GuaCUGCGga c-GCGGGuuc aauuCCCGC- CGCCUCCacc a
Acid.ferr.-2.   GuaCUGCGga c-GCGGGuuc aauuCCCGC- CGCCUCCacc a
Fran.tula.      aGUUUGUGga c-GCGGGuuc aaauCCCGC- CGCCUCCacc a
Dich.nodo.      gauucgcgga c-GGGGGuuc aaauCCCCC- cgccuccacc a
Xyle.fast.-1.   uACUUUCGga c-GGCGGuuc gauuCCGCC- CACCUCCacc a
Xyle.fast.-2.   uACUUUCGga c-GGCGGuuc gauuCCGCC- CACCUCCacc a
Xyle.fast.-3.   uACUUUCGga c-GGCGGuuc gauuCCGCC- CACCUCCacc a
Xant.camp.      uGCUUCCGga c-GGCGGuuc gauuCCGCC- CACCUCCacc a
Xant.axon.      uGCUUCCGga c-GGCGGuuc gauuCCGCC- CACCUCCacc a
Legi.pneu.      GACUUGCgga c-gcggnnnn nnnnnnnnn- nnnnnnnnnn n
Coxi.burn.      GAUUUACGga c-GCGGGuuc aauuCCCGC- CGCCUCCacc a
Meth.caps.      GAUUUGCGga c-GCGGGuuc aauuCCCGC- CGCCUCCacc a
Uncu.u01a.      U-CUGGCgga c-gcggnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.u01b.      U-CUGGCgga c-gcggnnnn nnnnnnnnn- nnnnnnnnnn n
Acin.ADP1.      UGCUGGCGga c-GCGGGuuc aacuCCCGC- CAUCUCCacc a
Micr.degr.      UACUGaCGga c-GGGGGuuc aaauCCCCC- CGCCUCCacc a
Pseu.aeru.      aGCUGGCGga c-GGGGGuuc aaauCCCCC- CGGUUCCacc a
Azot.vine.      aGCUGGCGga c-GGGGGuuc aaauCCCCC- CGGCUCCacc a
Pseu.puti.      UACUGGCGga c-GGGGGuuc aaauCCCCC- CGGCUCCacc a
Pseu.fluo.-1.   uACUGGCGga c-GGGGGuuc aaauCCCCC- CGGCUCCacc a
Pseu.fluo.-2.   uACUGGCGga c-GGGGGuuc aaauCCCCC- CGGCUCCacc a
Pseu.syri.-1.   UACUGGCGga c-GGGGGuuc aaauCCCCC- CGGCUCCacc a
Pseu.syri.-2.   UACUGGCGga c-GGGGGuuc aaauCCCCC- CGGCUCCacc a
Mari.hydr.      UGCUGGCgga c-gcggnnnn nnnnnnnnn- nnnnnnnnnn n
Pseu.halo.      GcuUUUCgga c-ggggnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.ww11.      GuGUUCUGga c-gcgnnnnn nnnnnnnnn- nnnnnnnnnn n
Shew.putr.      GuuUUCUGga c-GCGGGuuc aaguCCCGC- CGCCUCCacc a
Colw.spec.      GcuUUUUGga c-GGGGGuuc gauuCCCCC- CCGCUCCacc a
Phot.phos.      uGaUUUUgga c-gcggnnnn nnnnnnnnn- nnnnnnnnnn n
Vibr.chol.      GGUUUUCGga c-GGGGGuuc aacuCCCCC- CAGCUCCacc a
Aero.salm.      uAAUUUUgga c-ggggnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.vlw3.      uAAUUUUGga c-gggnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.vlw4.      uAAUUUUGga c-ggggguun nnnnnnnnn- nnnnnnnnnn n
Uncu.vls1.-3.   uAAUUUUGga c-gggnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.rca3.      uAAUUUUGga c-gggnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.vls1.-4.   uAAUUUUGga c-gggnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.ww-9.      uAAUUUUGga c-gggnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.ww10.      uAAUUUUGga c-gggnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.vlw5.      uAAUUUUGga c-gggnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.vlw6.      uAAUUUUGgn n-nnnnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.rca4.      GUuUUUCGga c-gcgnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.rca7.      GUuUUUCGga c-gcgnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.rca8.      GUuUUUCGga c-gcnnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.lem1.      GUuUUUCGga c-gcgnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.lem2.      uauUuUCGga c-gcggguuc aannnnnnn- nnnnnnnnnn n
Past.mult.      UAAUUUCGga c-GCGGGuuc aacuCCCGC- CAGCUCCacc a
Mann.haem.      aAAUUUCGga c-GGGGGuuc aaauCCCCC- CAGCUCCacc a
Haem.somn.      UAAUUUCGga c-GGGGGuuc aacuCCCCC- CAGCUCCacc a
Haem.infl.      UAAUUUCGga c-GGGGGuuc aacuCCCCC- CAGCUCCacc a
Haem.ducr.      UAAUUUCGga c-GGGGGuuc aaauCCCCC- CAGCUCCacc a
Acti.pleu.      UAAUUUCGga c-GGGGGuuc aaauCCCCC- CAGCUCCacc a
Acti.acti.      gAAUUUCGga c-GGGGGuuc aacuCCCCC- CAGCUCCacc a
Buch.aphi.      aAAUUUUGga c-GCGGGuuc aaauCCCGC- CAGCUCCacc a
Buch.APS-.      aAAUUUUGga c-GCGGGuuc gaauCCCGC- CAGCUCCacc a
Esch.coli.-1.   GAAUUUCGga c-GCGGGuuc aacuCCCGC- CAGCUCCacc a
Esch.coli.-2.   AAAUUUCGga c-GCGGGuuc aacuCCCGC- CAGCUCCacc a
Esch.coli.-3.   GAAUUUCGga c-GCGGGuuc aacuCCCGC- CAGCUCCacc a
Prov.rett.      AAAUUUCnnn n-nnnnnnnn nnnnnnnnn- nnnnnnnnnn n
Salm.typh.-1.   GAAUUUCGga c-GCGGGuuc aacuCCCGC- CAGCUCCacc a
Salm.typh.-2.   GAAUUUCGga c-GCGGGuuc aacuCCCGC- CAGCUCCacc a
Salm.ente.-1.   GAAUUUCGga c-GCGGGuuc aacuCCCGC- CAGCUCCacc a
Salm.ente.-2.   GAAUUUCGga c-gcgnnnnn nnnnnnnnn- nnnnnnnnnn n
Shig.flex.      GAAUUUCGga c-GCGGGuuc aacuCCCGC- CAGCUCCacc a
Shig.dyse.      GAAUUCCGga c-GCGGGuuc aacuCCCGC- CAGCUCCacc a
Salm.para.      GAAUUUCGga c-GCGGGuuc aacuCCCGC- CAGCUCCacc a
Erwi.caro.      uAGUUCCGga c-GGGGGuuc aaauCCCCC- CAGCUCCacc a
Erwi.chry.      GAAUUUCGga c-GCGGGuuc aacuCCCGC- CAGCUCCacc a
Kleb.pneu.      GAAUUUCGga c-GCGGGuuc aacuCCCGC- CAGCUCCacc a
Uncu.rca1.      cAAUUUcGga c-gggnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.vls1.-1.   uAAUUCUGga c-gcgnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.vls3.      uAAUUCUGa- c-gcgnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.vls4.      uAAUUUUGga c-ggggnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.ww-1.      GAAUUUCGga c-gcgnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.rca2.      GAAUUUCGga c-gcgnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.ww-2.      GAAUUUCGga c-gcgnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.ww-3.      GAAUUUCGga c-gcgnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.ql-1.      GAAUUUCGga c-gunnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.ww-4.      GAAUUUCGga c-gcgnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.vls1.-2.pa.gnnnnnnnnn n-nnnnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.vls5.      GAAUUUCGga c-gcgnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.fs-1.      GAAUUUCGga c-gcnnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.vls6.      GAAUUUCGga c-gcggnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.fs-2.      GAAUUUCGga c-gcgnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.ww-5.      GAAUUUCGga c-gcggnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.ww-6.      GAAUUUCGga c-gcggnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.vlw1.      GAaUUUCGga c-gcggnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.vls7.      GAAUUUCGga c-gcggguuc annnnnnnn- nnnnnnnnnn n
Uncu.vls8.      GAAUUUCGga c-gcgnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.vls9.      uAAUUUCGga c-ggnnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.vlw2.      uAaUUUCGga c-gcgggucn nnnnnnnnn- nnnnnnnnnn n
Uncu.ww-7.      GAAUUUCGga c-gcgnnnnn nnnnnnnnn- nnnnnnnnnn n
Uncu.ww-8.      GAAUUUCGga c-nnnnnnnn nnnnnnnnn- nnnnnnnnnn n
Yers.ente.      uAAUUUCGga c-GGGGGuuc aaauCCCCC- CAGCUCCacc a
Yers.pest.      uAAUUUCGga c-GGGGGuuc aaauCCCCC- CAGCUCCacc a
Desu.vulg.      CaUUCUCGga c-GCGGGuuc gauuCCCGC- CGCCUCCacc a
Desu.desu.      UGUUCUCgga c-ggggnnnn nnnnnnnnn- nnnnnnnnnn n
Geob.sulf.      gAUCUUCGga c-GCGGGuuc gacuCCCGC- CACCUCCacc a
Geob.meta.      gAUCUUCGga c-GCGGGuuc gacuCCCGC- CACCUCCacc a
Heli.pylo.      GAuuUUUGga c-UGGGGuuc gauuCCCCA- CAGCUCCacc a
Camp.jeju.      UAUUUUUGga c-AGGGGuuc gauuCCCCU- CGCUUCCacc a
Fuso.nucl.-1.   UGAUUUCGga c-ACGAGuuc gacuCUCGU- CAUCUCCacc a
Fuso.nucl.-2.   UGAUUUCGga c-ACGAGuuc gacuCUCGU- CAUCUCCacc a
Fuso.nucl.-3.   UGAUUUCGga c-ACGAGuuc gauuCUCGU- CGUCUCCacc a
Stre.coel.      CAcCGUUGga c-GCGGGuuc gauuCCCGC- CAUCUCCacc a
Ther.fusc.      CAUCGAAGga c-GCGGGuuc gauuCCCGC- CACCUCCacc a
Trop.whip.      uGCcG-CGga c-GGGGGuuc gauuCCCCC- CAUCUCCacc a
Myco.lepr.      UGCCGuAGga c-CCGGGuuc gauuCCCGG- CAGCUCCacc a
Myco.aviu.      UGCCGuAGga c-CCGGGuuc gauuCCCGG- CAGCUCCacc a
Myco.tube.      UGCCGuAGga c-CCGGGuuc gauuCCCGG- CAGCUCCacc a
Myco.bovi.      UGCCGuAGga c-CCGGGuuc gauuCCCGG- CAGCUCCacc a
Myco.mari.      UGCCGuAGga c-CCGGGuuc gauuCCCGG- CAGCUCCacc a
Myco.smeg.      UGCCGuAGga c-CCGGGuuc aauuCCCGG- CAGCUCCacc a
Cory.diph.      UGaCGUAGga c-CCGGGuuc aauuCCCGG- CAGCUCCacc a
Cory.glut.      UGACGUAGga c-CCGGGuuc aauuCCCGG- CAGCUCCacc a
Desu.hafn.      UGcCUUCGga c-GGCGGuuc gauuCCGCC- CACCUCCacc a
Deha.ethe.      CUUUUCUGga cgGGGAGuuc gaccCUCCCc CGUCUCCacc a
Heli.mobi.      UuUCUUcGga c-gcggnnnn nnnnnnnnn- nnnnnnnnnn n
Baci.halo.      UAUUUCUGga c-GUGGGuuc gauuCCCAC- CGUCUCCacc a
Baci.stea.      UGCCUCUGga c-GUGGGuuc gacuCCCAC- CGUCUCCacc a
Baci.mega.      UAuUUCUgga c-guggnnnn nnnnnnnnn- nnnnnnnnnn n
Baci.subt.      UGUUUCUGga c-GUGGGuuc gacuCCCAC- CGUCUCCacc a
Stap.sapr.      AACCucugga c-gcnnnnnn nnnnnnnnn- nnnnnnnnnn n
Stap.epid.      GACCUCUGga c-GCGGGuuc gaauCCCGC- CGUCUCCacc a
Stap.aure.-1.   GACCUUUGga c-GCGGGuuc aaauCCCGC- CGUCUCCacc a
Stap.aure.-2.   GACCUCUGga c-GCGGGuuc aaauCCCGC- CGUCUCCacc a
Stap.aure.-3.   gACCUCUGga c-GCGGGuuc aaauCCCGC- CGUCUCCacc a
Stap.aure.-4.   GACCUCUGga c-GCGGGuuc aaauCCCGC- CGUCUCCacc a
Stap.aure.-5.   GACCUCUGga c-GCGGGuuc aaauCCCGC- CGUCUCCacc a
Stap.xylo.      AACCucugga c-gcnnnnnn nnnnnnnnn- nnnnnnnnnn n
Baci.anth.      UAUUUUUGga c-GUGGGuuc gacuCCCAC- CGUCUCCacc a
List.inno.      UAUUUCUGga c-GUGGGuuc gacuCCCAC- CAUCUCCacc a
List.mono.      UAUUUCUGga c-GUGGGuuc gacuCCCAC- CAUCUCCacc a
List.gray.-1.   UAUUUCUGgn n-nnnnnnnn nnnnnnnnn- nnnnnnnnnn n
List.gray.-2.   UAUUUCUGgn n-nnnnnnnn nnnnnnnnn- nnnnnnnnnn n
List.ivan.      UAUUUCUGgn n-nnnnnnnn nnnnnnnnn- nnnnnnnnnn n
List.seel.      UAUUUCUGgn n-nnnnnnnn nnnnnnnnn- nnnnnnnnnn n
List.wels.      UAUUUCUGgn n-nnnnnnnn nnnnnnnnn- nnnnnnnnnn n
Leuc.mese.      GCGAuuugga c-agnnnnnn nnnnnnnnn- nnnnnnnnnn n
Leuc.pseu.      ACGGuuugga c-agnnnnnn nnnnnnnnn- nnnnnnnnnn n
Leuc.lact.      GCAGuuugga c-annnnnnn nnnnnnnnn- nnnnnnnnnn n
Lact.delb.      UGUGUUUnnn n-nnnnnnnn nnnnnnnnn- nnnnnnnnnn n
Lact.gass.      UACGUUUGga c-AGGGGuuc aauuCCCCU- CAUCUCCacc a
Lact.sake.      UGCGCAUGga c-GCGGGuuc aaccCCCGC- CGGCUCCacc a
Lact.helv.      UGCGucugga c-agnnnnnn nnnnnnnnn- nnnnnnnnnn n
Lact.gall.      UGCGuuugga c-acnnnnnn nnnnnnnnn- nnnnnnnnnn n
Lact.plan.-1.   UAUGcuuaga c-gcnnnnnn nnnnnnnnn- nnnnnnnnnn n
Carn.pisc.pa.   uaugcuugga c-AGGGGuuc gacuCCCCU- cgucuccacc a
Ente.faec.-1.   UAUGUUUGga c-GCGGGuuc gacuCCCGC- CGUCUCCacc a
Ente.faec.-2.   UGUGUUUGga c-GCGGGuuc gacuCCCGC- CGUCUCCacc a
Ente.dura.      UGUGuuugga c-gcnnnnnn nnnnnnnnn- nnnnnnnnnn n
Oeno.oeni.      AUAAUUUGga c-auggguuc gacucccau- CUACUCCacc a
Lact.lact.-1.   GGUGuuugga c-agnnnnnn nnnnnnnnn- nnnnnnnnnn n
Lact.lact.-2.   GGUGuuugga c-agnnnnnn nnnnnnnnn- nnnnnnnnnn n
Lact.lact.-3.   GGUGuuugga c-agnnnnnn nnnnnnnnn- nnnnnnnnnn n
Lact.lact.-4.   GGUGuuugga c-agnnnnnn nnnnnnnnn- nnnnnnnnnn n
Lact.garv.      GGUGucugga c-agnnnnnn nnnnnnnnn- nnnnnnnnnn n
Lact.plan.-2.   GGCAuuugga c-agnnnnnn nnnnnnnnn- nnnnnnnnnn n
Pedi.pent.      caugcuugga c-GCGGGuuc gacuCCCGC- CGACUCCacc a
Lact.raff.      GGCAuuugga c-agnnnnnn nnnnnnnnn- nnnnnnnnnn n
Stre.equi.      GGUGUUUGga c-GUGGGuuc gacuCCCAC- CAGCUCCacc a
Stre.uber.      GGUGUUUGga c-GUGGGuuc gacuCCCAC- CAGCUCCacc a
Stre.pyog.      GGUGUUUGga c-GUGGGuuc gacuCCCAC- CAGCUCCacc a
Stre.suis.pa.   ---------- ---------- ---------- ---------- -
Stre.ther.      GAUGcuugga c-gunnnnnn nnnnnnnnn- nnnnnnnnnn n
Stre.gord.      GAUGUUUGga c-GUGGGuuc gacuCCCAC- CGGCUCCacc a
Stre.miti.      GAUGUUUGga c-GUGGGuuc gacuCCCAC- CGGCUCCacc a
Stre.pneu.      GGUGUUUGga c-GUGGGuuc gacuCCCAC- CGGCUCCacc a
Stre.muta.      GAUGUUUGga c-GUGGGuuc gacuCCCAC- CGGCUCCacc a
Myco.capr.      AUAUCUUGga c-GCGAGuuc gauuCUCGC- CAUCUCCacc a
Urea.urea.      GUGUUGCGga a-AGGGGuuc gacuCCCCU- CAUCUCCacc a
Spir.kunk.      UAUUUgUGga c-GCGGGuuc aauuCCCGC- CAUCUCCacc a
Myco.geni.      cCuUUAUGga a-ACGGGuuc gauuCCCGU- CAUCUCCacc a
Myco.pneu.      cCuUUAUGga a-ACGGGuuc gauuCCCGU- CAUCUCCacc a
Myco.pulm.      AAUGUgUGga c-CCGGGuuc gacuCCCGG- CAUUUCCacc a
Clos.ther.      CGAUUUCGga c-AGGGGuuc gacuCCCCU- CGCCUCCacc a
Ther.teng.      CGCCUUCGga c-CGGGGuuc gaauCCCCG- CACCUCCacc a
Clos.perf.      UGCUUUCGga c-ACGGGuuc gacaCCCGU- CGCCUCCacc a
Clos.botu.      UGCUUUCGga c-AGGGGuuc gauuCCCCU- CGCCUCCacc a
Clos.diff.      GAUUUGCGga c-AGGGGuuc gacuCCCCU- CGuCUCCacc a
Clos.acet.-1.pa.cauuuucgga c-AGGGGuuc gauuCCCCU- cgccuccacc a
Clos.acet.-2.   CAUUUUCGga c-AGGGGuuc gauuCCCCU- CGCCUCCacc a
Rumi.albu.      GGCUUUCGga c-AGGAGuuc gauuCUCCU- CAUCUCCacc a
Carb.hydr.      GUcCUCCGga cgGuGGGuuc gauuCCCcC- CGCCUCCacc a
support         SSSSSSSS-- --S-SSS--- ----SSS-S- ---------- -