#NEXUS 

Begin trees;  [Treefile saved Tue Jan  8 17:32:55 2002]
[!
>Data file = /home/bjorn/bartonella/Glycolysis/Analysis15/E_edd/redaa2.nex
>Bootstrap method with heuristic search:
>  Number of bootstrap replicates = 500
>  Starting seed = 495292655
>  Optimality criterion = distance (minimum evolution)
>    Negative branch lengths allowed, but set to zero for tree-score calculation
>    Distance measure = mean character difference
>  Starting tree(s) obtained via stepwise addition
>  Addition sequence: random
>    Number of replicates = 10
>    Starting seed = 1400031245
>  Number of trees held at each step during stepwise addition = 1
>  Branch-swapping algorithm: tree-bisection-reconnection (TBR)
>  Steepest descent option not in effect
>  Initial 'MaxTrees' setting = 100
>  Zero-length branches not collapsed
>  'MulTrees' option in effect
>  Topological constraints not enforced
>  Trees are unrooted
>
>   500 bootstrap replicates completed
>   Time used = 7 sec (CPU time = 7.26 sec)
]
	Translate
		1 Escherichia_col,
		2 Pseudomonas_aer,
		3 Zymomonas_mobil,
		4 Caulobacter_cre,
		5 Rhizobium_melil,
		6 Mesorhizobium_l,
		7 Bartonella_hens,
		8 Agrobacterium_r,
		9 1Helicobacter_p,
		10 2Helicobacter_p
		;
tree PAUP_1 = [&U] (1,(2,4,(((5,6)100,7)73,8)78,(9,10)100)56,3)0;
End;