#NEXUS 

Begin trees;  [Treefile saved Tue Jan  8 17:19:21 2002]
[!
>Data file = /home/bjorn/bartonella/Glycolysis/Analysis15/Aldolase2/redaa2.nex
>Bootstrap method with heuristic search:
>  Number of bootstrap replicates = 500
>  Starting seed = 2050393499
>  Optimality criterion = maximum parsimony
>    Character-status summary:
>      Of 122 total characters:
>        All characters are of type 'unord'
>        All characters have equal weight
>        12 characters are constant
>        11 variable characters are parsimony-uninformative
>        Number of parsimony-informative characters = 99
>    Gaps are treated as "missing"
>  Starting tree(s) obtained via stepwise addition
>  Addition sequence: random
>    Number of replicates = 10
>    Starting seed = 432416630
>  Number of trees held at each step during stepwise addition = 1
>  Branch-swapping algorithm: tree-bisection-reconnection (TBR)
>  Steepest descent option not in effect
>  Initial 'MaxTrees' setting = 100 (will be auto-increased by 100)
>  Branches collapsed (creating polytomies) if maximum branch length is zero
>  'MulTrees' option in effect
>  Topological constraints not enforced
>  Trees are unrooted
>
>   500 bootstrap replicates completed
>   Time used = 00:14:00 (CPU time = 00:13:51.8)
]
	Translate
		1 Helicobacter_py,
		2 Thermotoga_mari,
		3 Deinococcus_rad,
		4 Treponema_palli,
		5 Trichomonas_vag,
		6 Rhizobium_melil,
		7 Rhodobacter_sph,
		8 Caulobacter_cre,
		9 Pseudomonas_stu,
		10 Neisseria_menin,
		11 Alcaligenes_eut,
		12 Xanthobacter_fl,
		13 Nostoc_commune,
		14 Synechocystis_s,
		15 Cyanophora_para,
		16 Giardia_lamblia,
		17 Bacillus_subtil,
		18 Mycoplasma_pneu,
		19 Escherichia_col,
		20 Haemophilus_inf,
		21 Campylobacter_j,
		22 Borrelia_burgdo,
		23 Schizosaccharom,
		24 Saccharomyces_c,
		25 Neurospora_cras,
		26 Mycobacterium_l,
		27 Streptomyces_ga
		;
tree PAUP_1 = [&U] (1,2,(3,((((4,5)100,((((6,7)73,8)76,15)54,(9,10)82,11,12,(13,14)51)90)53,16)62,(17,(18,((((19,20)87,21,22)87,((23,24)76,25)60)55,(26,27)96)100)72)50)62)75)0;
End;