#NEXUS 

Begin trees;  [Treefile saved Wed Jan  9 16:47:50 2002]
[!
>Data file = /home/bjorn/bartonella/Glycolysis/Analysis15/Pmg/redaa2.nex
>Bootstrap method with heuristic search:
>  Number of bootstrap replicates = 500
>  Starting seed = 920907820
>  Optimality criterion = maximum parsimony
>    Character-status summary:
>      Of 168 total characters:
>        All characters are of type 'unord'
>        All characters have equal weight
>        47 characters are constant
>        11 variable characters are parsimony-uninformative
>        Number of parsimony-informative characters = 110
>    Gaps are treated as "missing"
>  Starting tree(s) obtained via stepwise addition
>  Addition sequence: random
>    Number of replicates = 10
>    Starting seed = 223610477
>  Number of trees held at each step during stepwise addition = 1
>  Branch-swapping algorithm: tree-bisection-reconnection (TBR)
>  Steepest descent option not in effect
>  Initial 'MaxTrees' setting = 100 (will be auto-increased by 100)
>  Branches collapsed (creating polytomies) if maximum branch length is zero
>  'MulTrees' option in effect
>  Topological constraints not enforced
>  Trees are unrooted
>
>   500 bootstrap replicates completed
>   Time used = 00:03:12 (CPU time = 00:03:10.7)
]
	Translate
		1 Bartonella_hens,
		2 Mesorhizobium_l,
		3 1Schizosaccharo,
		4 Zymomonas_mobil,
		5 Caulobacter_cre,
		6 Mycobacterium_l,
		7 Mycobacterium_t,
		8 1Streptomyces_c,
		9 1Saccharomyces,
		10 BNeisseria_meni,
		11 ANeisseria_meni,
		12 Haemophilus_inf,
		13 Homo_sapiens,
		14 Mus_musculus,
		15 Escherichia_col,
		16 Treponema_palli,
		17 Borrelia_burgdo,
		18 Chlamydia_trach,
		19 Chlamydophila_p
		;
tree PAUP_1 = [&U] (1,2,3,((4,5,(((6,7)100,8)73,9)94,((10,11)99,12)100,(13,14)99,(15,17)58,16)51,(18,19)100)93)0;
End;