CLUSTAL W (1.81) multiple sequence alignment


Escherichia_coli               --------MNPQLLRVTNRIIERSRETRSAYLARIEQAKTSTVHRSQLAC
Pseudomonas_aeruginosa         --------MHPRVLEVTRRIQARSAATRQRYLEMVRAAASKGPHRGTLPC
Zymomonas_mobilis              -----MTDLHSTVEKVTARVIERSRETRKAYLDLIQYEREKGVDRPNLSC
Caulobacter_crescentus         ------MSLNPVIADVTARIVARSKDSRAAYLANMDRAIENQPGRAKLSC
Rhizobium_meliloti             ------MSADSRIAAITARIVERSKPYREPYLDRVRSAATNGPHRTVLGC
Mesorhizobium_loti             ------MTARRDIEAITERIRQRSKAGRERYLGRIAEASNQTANRSVLSC
Bartonella_henselae            MKGGINMALSKTIATVTRRICERSAPTREIYLDRIAKAQANHPKRSFLGC
Agrobacterium_radiobacter      ------MSVLPTIQAVTERIAARRAQSRREYLDLVEAQRQQGAHRAALSC
1Helicobacter_pylori           -------MPKHSLEQIKEKITERSKKTRELYLENIFNPK-NQPKIESLGC
2Helicobacter_pylori           -------MPKHSLEQIKEKITERSKKTRELYLENTFNPK-NQPKIESLGC
                                           :  :. ::  *    *  **        .      * *

Escherichia_coli               GNLAHGFAACQPEDKASLKSMLRNNIAIITSYNDMLSAHQPY-EHYPEII
Pseudomonas_aeruginosa         GNLAHGVAACGESDKQTLRLMNQANVAIVSAYNDMLSAHQPVRAPFRGLI
Zymomonas_mobilis              SNLAHGFAAMNG-DKPALRDFNRMNIGVVTSYNDMLSAHEPY-YRYPEQM
Caulobacter_crescentus         ANWAHAFAASPGVDKLRALDPNAPNIGIVSAYNDMLSAHQPL-EAYPALI
Rhizobium_meliloti             GNLAHGFAVCSPAEKVALAGDRVPNLGIITSYNDMLSAHQPF-ETYPALI
Mesorhizobium_loti             GNLAHGFAVCSPSEKLALGADKVPNLGIITSYNDMLSAHQPF-ETYPALI
Bartonella_henselae            ANQAHGFAACGSIDKKRLKRNIVGNIGIITAYNDILSAHQPF-ESFPHLI
Agrobacterium_radiobacter      GNLAHGFAACSSSEKRCLSGSTALNLGIVTSYNDMLSAHQPY-GNYPDAI
1Helicobacter_pylori           ANIAHVTASMPEHLKMPLGSHKRKHFAIITAYNDMLSAHQPF-KNYPDLI
2Helicobacter_pylori           ANIAHVTASMPEHLKMPLGSHKRKHFAIITAYNDMLSAHQPF-KNYPDLI
                               .* **  *      *         :..::::***:****:*    :   :

Escherichia_coli               R-KALHEANAVGQVAGGVPAMCDGVTQGQDGMELSLLSREVIAMSAAVGL
Pseudomonas_aeruginosa         KPGACTRSVRSASVAGGVPAMCDGVTQGEPGMELSLASRDVIAMSTAIAL
Zymomonas_mobilis              K-VFAREVGATVQVAGGVPAMCDGVTQGQPGMEESLFSRDVIALATSVSL
Caulobacter_crescentus         K-DAARDVGATAQFAGGVPAMCDGVTQGRPGMELSLFSRDVIAMATAVAL
Rhizobium_meliloti             R-EAAHEAGGVAQVAGGVPAMCDGVTQGQPGMELSLFSRDVIAMAAGIGL
Mesorhizobium_loti             K-DAAREAGGIAQVAGGVPAMCDGVTQGQPGMELSLFSRDVIAMSAAVGL
Bartonella_henselae            K-ETARMFGGVAQVAGGVPAMCDGVTQGNTGMELSLFSRDVIAMATAIGL
Agrobacterium_radiobacter      K-SAARSVGATAQVARGVPAMCDGVTQGQPGMDLSLFSRDVIAMSTAIAL
1Helicobacter_pylori           K-KELQEHNAYASVASGVPAMCDGITQGYDGMELSLFSRDVIALSTAVGL
2Helicobacter_pylori           K-KELQEHNAYASVASGVPAMCDGITQGYEGMELSLFSRDVIALSTAVGL
                               :           ..* ********:***  **: ** **:***:::.:.*

Escherichia_coli               SHNMFDGALFLGVCDKIVPGLTMAALSFGHLPAVFVPSGPMASGLPNKEK
Pseudomonas_aeruginosa         SHNMFDAALCLGVCDKIVPGL-LSAASFGHLPTVFVPGGPMPTGISNKEK
Zymomonas_mobilis              SHGMFEGAALLGICDKIVPGLLMGALRFGHLPTILVPSGPMTTGIPNKEK
Caulobacter_crescentus         THDAFDSALYLGVCDKIVPGLVIGALTFSHLPALFVPAGPMTSGLPNSEK
Rhizobium_meliloti             SHNMFDAAVYLGVCDKIVPGLAIAALTFGHLPAVFIPAGPMTTGLPNDEK
Mesorhizobium_loti             SHNMFDAAVFLGVCDKIVPGLVIAALTFGHLPAVFIPAGPMTTGLPNDEK
Bartonella_henselae            SHDMFDAALYLGVCDKIVPGLVIGALTFGHLPGIFVPAGPMTSGQGNDEK
Agrobacterium_radiobacter      SHNMFDAAVYLGVCDKIVPGLLIGALSFGHLPAVFVPAGPMTSGLSNDEK
1Helicobacter_pylori           SHNVFDGAFFLGVCDKIVPGLLIGALSFGNLASVFVPSGPMVSGIENYKK
2Helicobacter_pylori           SHNVFDGAFFLGVCDKIVPGLLIGALSFGNLASVFVPSGPMVSGIENYKK
                               :*. *:.*  **:******** :.*  *.:*. :::*.*** :*  * :*

Escherichia_coli               VRIRQLYAEGKVDRMALLESEAASYHAPGTCTFYGTANTNQM-VVEFMGM
Pseudomonas_aeruginosa         AAVRQLFAEGKATREELLASEMASYHAPGTCTFYGTANTNQVRLVEVMGL
Zymomonas_mobilis              IRIRQLYAQGKIGQKELLDMEAACYHAEGTCTFYGTANTNQM-VMEVLGL
Caulobacter_crescentus         ARIRALYAEGKVGREELLAAESASYHGPGTCTFYGTANTNQM-LMELMGF
Rhizobium_meliloti             AKVRQLFAEGKVGRDELLEAESKSYHGPGTCTFYGTANSNQM-LMEIMGF
Mesorhizobium_loti             AKVRQLYAEGKAGRAELLEAESKSYHGPGTCTFYGTANSNQM-LMEIMGL
Bartonella_henselae            AKIRQLYAENKIDRQTLLESEARSYHGPGTCTFYGTANSNQV-ILEMMGL
Agrobacterium_radiobacter      ARIRQLSSEGKIDRPQLLDAEAKSYHSPGTCTFYGTANSNQM-LMEIMGL
1Helicobacter_pylori           AKARQDFAMGKINREELLKVEMQSYHDVGTCTFYGTANSNQM-MMEFMGL
2Helicobacter_pylori           AKARQDFAMGKINREELLKVEMQSYHDVGTCTFYGTANSNQM-MMEFMGL
                                  *   : .*  :  **  *  .**  **********:**: ::*.:*:

Escherichia_coli               QLPGSSFVHPDS-ACDALTAAAARQVTRMTGNGNEWMPIGKMIDEKVVVN
Pseudomonas_aeruginosa         HLPGASFVNPNTPLRDELSREAARQASRLTPENGNYVPMAEIVDEKAIVN
Zymomonas_mobilis              HMPGSAFVTPGTPLRQALTRAAVHRVAELGWKGDDYRPLGKIIDEKSIVN
Caulobacter_crescentus         HLPGSAFVHPNTPLREALVKESARRVAAVTNKGNEFIPVGRMIDEKSFVN
Rhizobium_meliloti             HLPGASFINPGTPLRDALTREATKRALAITALGNEFTPAGEMIDERSIVN
Mesorhizobium_loti             HTPGASFVNPGTPLREALTREATKRALAITALGNAYTPVGRMIDERSIVN
Bartonella_henselae            HMPGSSFINANTPLRDALTKEATKRVLEMIALGDSYSPIGLIVDERSFVN
Agrobacterium_radiobacter      HIPGSSFVNANTPLRDALTREATRRALSLTAGGNNYTPIGHIIDERAVVN
1Helicobacter_pylori           HVANSSFINPNNPLRKVLVEESAKRLAS-----GKVLPLAKLIDEKSILN
2Helicobacter_pylori           HVANSSFINPNNPLRKVLVEESAKRLAS-----GKVLPLAKLIDEKSILN
                               : ..::*: ...   . *   :.::       ..   * . ::**: .:*

Escherichia_coli               GIVALLATGGSTNHTMHLVAMARAAGIQINWDDFSDLSDVVPLMARLYPN
Pseudomonas_aeruginosa         SVVALLATGGSTNHTLHLLAIAQAAGIQLTWQDMSELSHVVPTLARIYPN
Zymomonas_mobilis              AIVGLLATGGSTNHTMHIPAIARAAGVIVNWNDFHDLSEVVPLIARIYPN
Caulobacter_crescentus         GVVGLMATGGSTNLALHIIAMAAAAGVQLTLEDLDDISKATPLLARVYPN
Rhizobium_meliloti             GVVGLHATGGSTNHTMHLVAMARAAGIVLTWQDISELSDLVPLLARVYPN
Mesorhizobium_loti             GVVGLHATGGSTNHTIHLIAMAAAAGIALTWQDISDLSEAVPLLARVYPN
Bartonella_henselae            AVVGLNATGGSTNHAIHLIAMAAAAGILLTWHDIAEISSVVPLLARIYPN
Agrobacterium_radiobacter      GIVGLLATGGSTNHTLHIVAIAQAAGLNVTWEDMSDLSDVVPLLTRVYPN
1Helicobacter_pylori           ALIGLMATGGSTNHTLHLIAIARSCGVILNWDDFDAVSNLIPLLAKVYPN
2Helicobacter_pylori           ALIGLMATGGSTNHTLHLIAIARSCGVILNWDDFDAISNLIPLLAKVYPN
                               .::.* ******* ::*: *:* :.*: :. .*:  :*   * ::::***

Escherichia_coli               GPADINHFQAAGGVPVLVRELLKAGLLHEDVNTVAG----FGLSRYTLEP
Pseudomonas_aeruginosa         GQADINHFQAAGGMSFLIRQLLDGGLLHEDVQTVAG----PGLRRYTREP
Zymomonas_mobilis              GPRDINEFQNAGGMAYVIKELLSANLLNRDVTTIAK----GGIEEYAKAP
Caulobacter_crescentus         GSADVNHFQAAGGMAFVIRELLKAGLVHEDVQTIAG----AGLSLYAKEP
Rhizobium_meliloti             GLADVNHFHAAGGMGFLIAQLLRKGLLHDDVRTVYG----QGLSAYAIDV
Mesorhizobium_loti             GLADVNHFHAAGGLGFLIRELLDEGVLHEDVQTVWG----EGLRPYAVEA
Bartonella_henselae            GLADINHFHAAGGMGFVIRELIEAGLVHEDVCTVFG----KDLNAYAIEA
Agrobacterium_radiobacter      GSADVNHFHAAGGMGLLIRELIDGGFLHEDVKTIWG----TGLESYPVEA
1Helicobacter_pylori           GSADVNAFEACGGLVFVIKELLKEGLLFEDTHTIMDTETQKGMQNYTKTP
2Helicobacter_pylori           GSADVNAFEACGGLAFVIKELLKEGLLFEDTHTIMDTETQKGMQNYTKTP
                               *  *:* *. .**:  :: :*:  ..:  *. *:       .:  *.   

Escherichia_coli               WLNNG-ELDWREGAEKSLDSNVIASFEQPFSHHGGTKVLSGNLGRAVMKT
Pseudomonas_aeruginosa         FLEDG-RLVWREGPERSLDEAILRPLDKPFSAEGGLRLMEGNLGRGVMKV
Zymomonas_mobilis              ALNDAGELVWKP-AGEPGDDTILRPVSNPFAKDGGLRLLEGNLGRAMYKA
Caulobacter_crescentus         VLEDG-MLTWRDGAHESLDPAIVRPVSDPFSKEGGLRLMAGNLGRGVMKI
Rhizobium_meliloti             KLGENGSVKREPAPEASADPKVLATVDRPFQHTGGLKMLSGNIGKAVIKI
Mesorhizobium_loti             KLGADGSVVREASPQASGDEKVLAPFHKAFQPTGGLKVLAGNLGHAVIKT
Bartonella_henselae            KLCNDDNVVREPALNESANHKVLTGWRKPFQSDGGIRILLGDLGTAIMKV
Agrobacterium_radiobacter      RLAG-DELVFEPTPAGSRNPKVLAPVSGAFSPNGGLKLLSGNIGKSVIKV
1Helicobacter_pylori           FLENN-QLVYKDAINHSLNTDILRPVSDPFAANGGLKILKGNLGRAVIKI
2Helicobacter_pylori           FLEND-QLVYKDAVSHSLNTDILRPVSEPFAANGGLKILKGNLGRAVIKI
                                *     :  .     . :  ::     .*   ** ::: *::* .: * 

Escherichia_coli               SAVPVENQVIEAPAVVFESQHDVMPAFEAGLLDR-DCVVVVRHQGPKANG
Pseudomonas_aeruginosa         SAVAPEHQVVEAPVRIFHDQASLAAAFKAGELER-DLVAVVRFQGPRANG
Zymomonas_mobilis              SAVDPKFWTIEAPVRVFSDQDDVQKAFKAGELNK-DVIVVVRFQGPRANG
Caulobacter_crescentus         SAVKPEHHVIEAPCAVFQEQEDFIAAFKRGELDR-DVVVVVRFQGPSANG
Rhizobium_meliloti             SAVKPESHVIEAPAKIFNDQAELNAAFKAGKLEG-DFVAVVRFQGPKANG
Mesorhizobium_loti             SAVKPERRIIEAPAKVFDSQQGLNDAFKAGTLTG-DFIAVIRFQGPKANG
Bartonella_henselae            SSVKSEYWRIEAPVLVFNDQEELQEAFKAGVLNDKDFIAVIRYQGPKANG
Agrobacterium_radiobacter      SAVKPENRVVEAPARVFHAQEELQKAFRDGELER-DMIAVVRFQGPRSIG
1Helicobacter_pylori           SAIKDEHRKVKARAIVFKTQSEFLERFKNKELER-DFVAVLPFQGPKSNG
2Helicobacter_pylori           SAIKDEHRKVKARAIVFKTQSEFLERFKNKELER-DFVAVLPFQGPKSNG
                               *::  :   ::*   :*  *  .   *.   *   * :.*: .*** : *

Escherichia_coli               MPELHKLMPPLGVLLDRCFKIALVTDGRLSGASGKVPSAIHVTPEAYDGG
Pseudomonas_aeruginosa         MPELHKLTPFLGVLQDRGFKVALVTDGRMSGASGKVPAAIHVSPEAIAGG
Zymomonas_mobilis              MPELHKLTPALGVLQDNGYKVALVTDGRMSGATGKVPVALHVSPEALGGG
Caulobacter_crescentus         MPELHNLSPSISVLLDRGHKVALVTDGRMSGASGKTPAAIHVTPEAAKGG
Rhizobium_meliloti             MPELHKLTTVLGILQDRGQKVAILTDGRMSGASGKVPAAIHVTPEAKEGG
Mesorhizobium_loti             MPELHKLTTVLGILQDRGQRVALVTDGRMSGASGKVPAAIHVTPEAVEDG
Bartonella_henselae            MPELHKLTTILGVLQDRGQKVALVTDGRMSGASGKIPAAIHVTPEALDDG
Agrobacterium_radiobacter      MPELHKLTPMLGVLQDRGFKVALLTDGRMSGASGKVPAAIHITPEASDGG
1Helicobacter_pylori           MPELHKLTTNLGALQDMGYKVALVTDGRMSGASGKVPSAIHLSPEGALNG
2Helicobacter_pylori           MPELHKLTTNLGALQDMGYKVALVTDGRMSGASGKVPSAIHLSPEGALNG
                               *****:* . :. * *   ::*::****:***:** * *:*::**.  .*

Escherichia_coli               LLAKVRDGDIIRVNGQTGELTLLVDEAELAAREPHIPDLSASR----VGT
Pseudomonas_aeruginosa         PLARLRDGDRVRVDGVNGELRVLVDDAEWQARS-LEPAPQDGN----LGC
Zymomonas_mobilis              AIGKLRDGDIVRISVEEGKLEALVPADEWNARP--HAEKPAFR----PGT
Caulobacter_crescentus         PLAYVQDGDVIRVNAETGELKIMVDEATLLART--PANVPASK----PGF
Rhizobium_meliloti             PIARIQEGDIVRIDAINGKVEVLVEDIALKTRVPAHIDLSDNE----FGM
Mesorhizobium_loti             PIARLHDGDIIRLDADAGTLEVLVPGTEFALRRTAEADLIGNE----FGF
Bartonella_henselae            PIARLQNGDVVCLDAHVGKLAILEDKVEFNARKITLPDLSKNE----YGV
Agrobacterium_radiobacter      AISRIRDGDLIRLDAIEGTLTYLGDDEEFNSRVPATHDHRPQH----YGT
1Helicobacter_pylori           AIIKIKDGDLIELDAPNNALNVLEKDFEKRGINPLFLETLENLEKPSFGL
2Helicobacter_pylori           AIIKIKDGDLIELDAPNNALNVLEKDFEKRGINPLFLETLENLEKPTFGL
                                :  :::** : :.   . :  :                         * 

Escherichia_coli               GRELFSALREKLSGAEQGATCITF------
Pseudomonas_aeruginosa         GRELFAFMRNAMSSAEEGACSFTESLNGWR
Zymomonas_mobilis              ARIV--------------------------
Caulobacter_crescentus         GRELFGWMRSGVGAADAGASVFA-------
Rhizobium_meliloti             GRELFAPFRQIAGAADRGGSVLFH------
Mesorhizobium_loti             GRELFAGFRQLVGRADHGASAFGTA-----
Bartonella_henselae            GRELFRIFRHSVNRADQGASVLIA------
Agrobacterium_radiobacter      GRELFARCRSLVSPADLGASILGRF-----
1Helicobacter_pylori           GRELFTSLRLNVNTAEEGGMSFGIKV----
2Helicobacter_pylori           GRELFTSLRLNANTAEEGGMSFGIKV----
                               .* :        . :. ..