#NEXUS 

Begin trees;  [Treefile saved Thu Jun 28 04:40:33 2001]
[!
>Data file = /home/bjorn/bartonella/Glycolysis/Analysis14/G6pi/rednt.nex
>Bootstrap method with heuristic search:
>  Number of bootstrap replicates = 500
>  Starting seed = 1230885074
>  Optimality criterion = maximum parsimony
>    Character-status summary:
>      182 characters are excluded
>      Of the remaining 364 included characters:
>        All characters are of type 'unord'
>        All characters have equal weight
>        99 characters are constant
>        23 variable characters are parsimony-uninformative
>        Number of (included) parsimony-informative characters = 242
>    Gaps are treated as "missing"
>  Starting tree(s) obtained via stepwise addition
>  Addition sequence: random
>    Number of replicates = 10
>    Starting seed = 520958689
>  Number of trees held at each step during stepwise addition = 1
>  Branch-swapping algorithm: tree-bisection-reconnection (TBR)
>  Steepest descent option not in effect
>  Initial 'MaxTrees' setting = 100
>  Branches collapsed (creating polytomies) if maximum branch length is zero
>  'MulTrees' option in effect
>  Topological constraints not enforced
>  Trees are unrooted
>
>   500 bootstrap replicates completed
>   Time used = 07:34:38 (CPU time = 01:23:44.0)
]
	Translate
		1 Borrelia_burgdo,
		2 Treponema_palli,
		3 Chlamydia_pneum,
		4 Chlamydia_murid,
		5 Plasmodium_falc,
		6 Toxoplasma_gond,
		7 Spinacia_olerac,
		8 2Arabidopsis_th,
		9 Clarkia_lewisii,
		10 Zea_mays,
		11 Cricetulus_gris,
		12 Sus_scrofa,
		13 Drosophila_mela,
		14 Drosophila_yaku,
		15 Escherichia_col,
		16 Haemophilus_inf,
		17 Kluyveromyces_l,
		18 Schizosaccharom,
		19 Leishmania_mexi,
		20 Trypanosoma_bru,
		21 Helicobacter_py,
		22 Neisseria_menin,
		23 Streptomyces_co,
		24 Deinococcus_rad,
		25 Mycobacterium_t,
		26 Bartonella_hens,
		27 Mesorhizobium_l,
		28 Acinetobacter_c,
		29 Neisseria_menin,
		30 Zymomonas_mobil,
		31 Caulobacter_cre,
		32 Spinacia_olerac,
		33 1Arabidopsis_th,
		34 Synechocystis_s
		;
tree PAUP_1 = [&U] (26,(((1,2)82,(3,4)96)98,(5,(6,((7,(9,10)58)60,8)100)83)90,((32,33)100,34)100)51,(((11,12)100,(13,14)100)61,(15,16)75)54,(17,18)97,(19,20)100,(21,22)84,(23,25)73,24,27,28,29,30,31)0;
End;