Supporting information for Kurek et al. (2002) Proc. Natl. Acad. Sci. USA, 10.1073/pnas.162077099

 

 

Table 1. Analysis of zinc binding to glutathione S-transferase

(GST) and GST-A1N176

Sample

Zn ppb (nmol/10 ml)

Protein-bound Zn, mol Zn/mol protein

Buffer

2.2 (0.33)

GST, 1.36 nmol

15.3 (2.32)

1.46

GST-A1N176, 1.55 nmol

45.6 (6.91)

4.25 (2.06 + 2.19)*

To quantify Zn2+ binding, purified GST (1.36 nmol) and GST-A1N176 (1.55 nmol) were dialyzed against 1 mM Hepes–KOH, pH 7.6, and then diluted with the dialysis buffer to 10 ml. Zn2+ concentrations were measured by using an inductively coupled plasma-mass spectrometer [PE Sciex (Thornhill, Ontario, Canada) ELAN 6000] with Rh3+ ion as an internal control at the laboratories of the Geological Survey in Jerusalem, Israel. ppb, parts per billion.

*Specific Zn2+ content in GhCesA1-N was calculated by subtracting estimated nonspecific binding assuming that GST binds Zn ions nonspecifically and that the average number of Zn ions bound nonspecifically on the surface of the proteins is proportional to the surface area. Thus, for GST-A1N176, 4.25 mol/mol protein includes Zn2+ bound on the protein surface. Because GST-A1N176 (41 kDa) has a larger surface area than GST (29 kDa), of the 4.25 mol Zn2+ bound, 2.06 mol is considered nonspecific surface binding, leaving an estimated 2.19 mol of Zn2+ ions bound specifically by the Zn-binding domains.