REMARK C1 structure found by conformational search CICADA REMARK T5-T8 (lateral) loop + adjacent guanine tetrade ATOM 1 P G 1 37.162 37.173 36.272 ATOM 2 O1P G 1 35.775 36.615 36.462 ATOM 3 O2P G 1 37.630 37.922 37.485 ATOM 4 O5' G 1 38.201 36.042 35.849 ATOM 5 C5' G 1 39.617 35.989 36.164 ATOM 6 H5'1 G 1 39.783 36.519 37.103 ATOM 7 H5'2 G 1 40.226 36.438 35.380 ATOM 8 C4' G 1 40.021 34.508 36.354 ATOM 9 H4' G 1 39.933 34.254 37.411 ATOM 10 O4' G 1 39.152 33.681 35.599 ATOM 11 C1' G 1 39.855 33.122 34.455 ATOM 12 H1' G 1 39.828 32.040 34.579 ATOM 13 N9 G 1 39.119 33.346 33.204 ATOM 14 C8 G 1 38.756 34.546 32.655 ATOM 15 H8 G 1 38.997 35.471 33.158 ATOM 16 N7 G 1 38.120 34.433 31.518 ATOM 17 C5 G 1 38.074 33.065 31.298 ATOM 18 C6 G 1 37.519 32.320 30.228 ATOM 19 O6 G 1 36.931 32.773 29.244 ATOM 20 N1 G 1 37.675 30.959 30.359 ATOM 21 H1 G 1 37.302 30.378 29.622 ATOM 22 C2 G 1 38.306 30.384 31.431 ATOM 23 N2 G 1 38.375 29.045 31.418 ATOM 24 H21 G 1 37.971 28.525 30.653 ATOM 25 H22 G 1 38.833 28.555 32.175 ATOM 26 N3 G 1 38.848 31.047 32.453 ATOM 27 C4 G 1 38.692 32.382 32.326 ATOM 28 C3' G 1 41.435 34.189 35.847 ATOM 29 H3' G 1 42.088 35.055 35.969 ATOM 30 C2' G 1 41.169 33.886 34.376 ATOM 31 H2'1 G 1 41.643 34.664 33.778 ATOM 32 H2'2 G 1 41.589 32.916 34.108 ATOM 33 O3' G 1 41.986 33.056 36.516 ATOM 34 P T 2 43.523 32.563 36.288 ATOM 35 O1P T 2 43.869 31.654 37.404 ATOM 36 O2P T 2 44.352 33.765 36.048 ATOM 37 O5' T 2 43.516 31.693 34.915 ATOM 38 C5' T 2 43.000 30.371 34.857 ATOM 39 H5'1 T 2 42.019 30.347 35.333 ATOM 40 H5'2 T 2 43.668 29.705 35.405 ATOM 41 C4' T 2 42.856 29.856 33.412 ATOM 42 H4' T 2 42.478 28.834 33.456 ATOM 43 O4' T 2 41.913 30.658 32.707 ATOM 44 C1' T 2 42.451 30.881 31.421 ATOM 45 H1' T 2 42.325 29.966 30.842 ATOM 46 N1 T 2 41.840 32.017 30.682 ATOM 47 C6 T 2 42.106 33.314 31.058 ATOM 48 H6 T 2 42.569 33.495 32.015 ATOM 49 C5 T 2 41.848 34.363 30.239 ATOM 50 C7 T 2 42.186 35.768 30.705 ATOM 51 H71 T 2 41.336 36.179 31.249 ATOM 52 H72 T 2 43.058 35.748 31.359 ATOM 53 H73 T 2 42.406 36.409 29.851 ATOM 54 C4 T 2 41.293 34.141 28.913 ATOM 55 O4 T 2 41.155 35.000 28.049 ATOM 56 N3 T 2 40.924 32.826 28.655 ATOM 57 H3 T 2 40.515 32.616 27.753 ATOM 58 C2 T 2 41.165 31.741 29.486 ATOM 59 O2 T 2 40.808 30.613 29.151 ATOM 60 C3' T 2 44.161 29.856 32.589 ATOM 61 H3' T 2 45.042 29.970 33.223 ATOM 62 C2' T 2 43.941 31.068 31.696 ATOM 63 H2'1 T 2 44.140 31.980 32.259 ATOM 64 H2'2 T 2 44.537 31.049 30.788 ATOM 65 O3' T 2 44.238 28.659 31.817 ATOM 66 P T 3 45.479 28.304 30.826 ATOM 67 O1P T 3 45.442 26.845 30.580 ATOM 68 O2P T 3 46.703 28.911 31.394 ATOM 69 O5' T 3 45.159 29.059 29.420 ATOM 70 C5' T 3 44.023 28.724 28.642 ATOM 71 H5'1 T 3 43.139 28.890 29.250 ATOM 72 H5'2 T 3 44.071 27.668 28.373 ATOM 73 C4' T 3 43.868 29.551 27.355 ATOM 74 H4' T 3 43.017 29.156 26.802 ATOM 75 O4' T 3 43.580 30.907 27.659 ATOM 76 C1' T 3 44.151 31.664 26.615 ATOM 77 H1' T 3 43.571 31.476 25.708 ATOM 78 N1 T 3 44.225 33.135 26.835 ATOM 79 C6 T 3 44.065 33.968 25.749 ATOM 80 H6 T 3 43.859 33.528 24.783 ATOM 81 C5 T 3 44.167 35.319 25.855 ATOM 82 C7 T 3 44.019 36.177 24.611 ATOM 83 H71 T 3 43.496 35.629 23.827 ATOM 84 H72 T 3 43.454 37.080 24.845 ATOM 85 H73 T 3 45.007 36.461 24.248 ATOM 86 C4 T 3 44.452 35.942 27.141 ATOM 87 O4 T 3 44.560 37.148 27.354 ATOM 88 N3 T 3 44.633 35.044 28.185 ATOM 89 H3 T 3 44.859 35.428 29.088 ATOM 90 C2 T 3 44.571 33.659 28.090 ATOM 91 O2 T 3 44.835 32.976 29.076 ATOM 92 C3' T 3 45.105 29.541 26.430 ATOM 93 H3' T 3 45.898 28.897 26.812 ATOM 94 C2' T 3 45.522 31.009 26.466 ATOM 95 H2'1 T 3 46.139 31.204 27.345 ATOM 96 H2'2 T 3 46.031 31.319 25.552 ATOM 97 O3' T 3 44.814 29.230 25.069 ATOM 98 P T 4 44.216 27.807 24.573 ATOM 99 O1P T 4 44.175 26.873 25.720 ATOM 100 O2P T 4 44.925 27.413 23.334 ATOM 101 O5' T 4 42.694 28.196 24.195 ATOM 102 C5' T 4 42.342 28.769 22.947 ATOM 103 H5'1 T 4 42.482 28.022 22.164 ATOM 104 H5'2 T 4 42.977 29.631 22.735 ATOM 105 C4' T 4 40.872 29.208 22.970 ATOM 106 H4' T 4 40.261 28.411 23.392 ATOM 107 O4' T 4 40.753 30.376 23.769 ATOM 108 C1' T 4 39.994 31.360 23.085 ATOM 109 H1' T 4 38.935 31.131 23.211 ATOM 110 N1 T 4 40.248 32.763 23.564 ATOM 111 C6 T 4 40.118 33.833 22.695 ATOM 112 H6 T 4 39.864 33.651 21.663 ATOM 113 C5 T 4 40.317 35.119 23.090 ATOM 114 C7 T 4 40.225 36.251 22.082 ATOM 115 H71 T 4 41.193 36.751 22.016 ATOM 116 H72 T 4 39.957 35.874 21.096 ATOM 117 H73 T 4 39.477 36.973 22.409 ATOM 118 C4 T 4 40.636 35.431 24.473 ATOM 119 O4 T 4 40.797 36.555 24.942 ATOM 120 N3 T 4 40.745 34.320 25.290 ATOM 121 H3 T 4 40.955 34.499 26.261 ATOM 122 C2 T 4 40.535 32.999 24.922 ATOM 123 O2 T 4 40.595 32.131 25.789 ATOM 124 C3' T 4 40.369 29.582 21.567 ATOM 125 H3' T 4 41.038 29.228 20.781 ATOM 126 C2' T 4 40.381 31.103 21.625 ATOM 127 H2'1 T 4 41.391 31.468 21.429 ATOM 128 H2'2 T 4 39.666 31.531 20.921 ATOM 129 O3' T 4 39.041 29.142 21.320 ATOM 130 P T 5 38.698 27.628 20.855 ATOM 131 O1P T 5 37.284 27.592 20.426 ATOM 132 O2P T 5 39.759 27.171 19.929 ATOM 133 O5' T 5 38.777 26.781 22.218 ATOM 134 C5' T 5 39.659 25.694 22.394 ATOM 135 H5'1 T 5 39.496 24.960 21.603 ATOM 136 H5'2 T 5 40.696 26.032 22.382 ATOM 137 C4' T 5 39.312 25.066 23.742 ATOM 138 H4' T 5 38.232 24.957 23.789 ATOM 139 O4' T 5 39.730 25.911 24.795 ATOM 140 C1' T 5 40.994 25.494 25.266 ATOM 141 H1' T 5 41.764 25.854 24.582 ATOM 142 N1 T 5 41.248 26.025 26.650 ATOM 143 C6 T 5 41.852 25.242 27.616 ATOM 144 H6 T 5 42.251 24.275 27.350 ATOM 145 C5 T 5 41.940 25.638 28.915 ATOM 146 C7 T 5 42.594 24.717 29.927 ATOM 147 H71 T 5 43.443 24.207 29.470 ATOM 148 H72 T 5 42.958 25.294 30.779 ATOM 149 H73 T 5 41.869 23.982 30.273 ATOM 150 C4 T 5 41.404 26.923 29.339 ATOM 151 O4 T 5 41.343 27.344 30.493 ATOM 152 N3 T 5 40.957 27.717 28.295 ATOM 153 H3 T 5 40.656 28.653 28.531 ATOM 154 C2 T 5 40.889 27.350 26.958 ATOM 155 O2 T 5 40.523 28.182 26.131 ATOM 156 C3' T 5 39.995 23.709 23.950 ATOM 157 H3' T 5 40.601 23.451 23.080 ATOM 158 C2' T 5 40.896 23.966 25.158 ATOM 159 H2'1 T 5 41.876 23.510 25.014 ATOM 160 H2'2 T 5 40.417 23.562 26.052 ATOM 161 O3' T 5 39.107 22.642 24.270 ATOM 162 P G 6 37.917 22.122 23.293 ATOM 163 O1P G 6 37.570 20.743 23.704 ATOM 164 O2P G 6 38.329 22.378 21.895 ATOM 165 O5' G 6 36.640 23.077 23.624 ATOM 166 C5' G 6 35.866 22.979 24.819 ATOM 167 H5'1 G 6 35.530 21.951 24.957 ATOM 168 H5'2 G 6 34.995 23.627 24.724 ATOM 169 C4' G 6 36.672 23.420 26.042 ATOM 170 H4' G 6 37.577 22.816 26.099 ATOM 171 O4' G 6 37.009 24.792 25.942 ATOM 172 C1' G 6 37.668 25.066 27.184 ATOM 173 H1' G 6 38.674 24.970 26.775 ATOM 174 N9 G 6 37.572 26.497 27.545 ATOM 175 C8 G 6 37.890 27.058 28.755 ATOM 176 H8 G 6 38.065 26.421 29.609 ATOM 177 N7 G 6 37.948 28.362 28.748 ATOM 178 C5 G 6 37.657 28.694 27.430 ATOM 179 C6 G 6 37.560 29.959 26.789 ATOM 180 O6 G 6 37.716 31.077 27.291 ATOM 181 N1 G 6 37.253 29.883 25.456 ATOM 182 H1 G 6 37.176 30.754 24.950 ATOM 183 C2 G 6 37.051 28.697 24.807 ATOM 184 N2 G 6 36.754 28.827 23.513 ATOM 185 H21 G 6 36.697 29.746 23.097 ATOM 186 H22 G 6 36.587 28.006 22.947 ATOM 187 N3 G 6 37.130 27.484 25.361 ATOM 188 C4 G 6 37.437 27.556 26.672 ATOM 189 C3' G 6 35.992 23.346 27.417 ATOM 190 H3' G 6 35.019 23.838 27.376 ATOM 191 C2' G 6 36.974 24.206 28.232 ATOM 192 H2'1 G 6 36.622 24.332 29.255 ATOM 193 H2'2 G 6 37.941 23.702 28.240 ATOM 194 O3' G 6 35.854 22.026 27.946 ATOM 195 H5T G5 7 37.353 42.954 28.533 ATOM 196 O5' G5 7 38.215 42.549 28.645 ATOM 197 C5' G5 7 38.054 41.126 28.432 ATOM 198 H5'1 G5 7 37.257 40.786 29.093 ATOM 199 H5'2 G5 7 38.956 40.542 28.620 ATOM 200 C4' G5 7 37.623 40.928 26.983 ATOM 201 H4' G5 7 38.083 41.718 26.390 ATOM 202 O4' G5 7 38.174 39.718 26.458 ATOM 203 C1' G5 7 37.165 39.162 25.592 ATOM 204 H1' G5 7 37.070 39.625 24.609 ATOM 205 N9 G5 7 37.292 37.729 25.292 ATOM 206 C8 G5 7 36.936 37.094 24.125 ATOM 207 H8 G5 7 36.650 37.677 23.262 ATOM 208 N7 G5 7 36.985 35.789 24.189 ATOM 209 C5 G5 7 37.389 35.541 25.497 ATOM 210 C6 G5 7 37.633 34.330 26.191 ATOM 211 O6 G5 7 37.535 33.186 25.751 ATOM 212 N1 G5 7 38.019 34.501 27.498 ATOM 213 H1 G5 7 38.200 33.667 28.039 ATOM 214 C2 G5 7 38.163 35.733 28.072 ATOM 215 N2 G5 7 38.556 35.739 29.346 ATOM 216 H21 G5 7 38.722 34.868 29.828 ATOM 217 H22 G5 7 38.689 36.616 29.830 ATOM 218 N3 G5 7 37.952 36.895 27.458 ATOM 219 C4 G5 7 37.569 36.725 26.178 ATOM 220 C3' G5 7 36.108 40.864 26.769 ATOM 221 H3' G5 7 35.545 41.111 27.669 ATOM 222 C2' G5 7 35.917 39.385 26.442 ATOM 223 H2'1 G5 7 35.352 38.905 27.241 ATOM 224 H2'2 G5 7 35.372 39.287 25.503 ATOM 225 O3' G5 7 35.639 41.663 25.666 ATOM 226 P G3 8 33.429 26.013 16.452 ATOM 227 O1P G3 8 32.951 25.627 15.094 ATOM 228 O2P G3 8 34.687 25.291 16.840 ATOM 229 O5' G3 8 33.616 27.592 16.615 ATOM 230 C5' G3 8 34.465 28.127 17.656 ATOM 231 H5'1 G3 8 35.133 27.338 18.003 ATOM 232 H5'2 G3 8 33.900 28.520 18.501 ATOM 233 C4' G3 8 35.290 29.246 17.042 ATOM 234 H4' G3 8 35.320 29.115 15.960 ATOM 235 O4' G3 8 34.665 30.504 17.231 ATOM 236 C1' G3 8 35.566 31.418 17.900 ATOM 237 H1' G3 8 34.964 32.282 17.620 ATOM 238 N9 G3 8 35.399 31.335 19.364 ATOM 239 C8 G3 8 35.089 30.197 20.079 ATOM 240 H8 G3 8 34.695 29.333 19.567 ATOM 241 N7 G3 8 35.315 30.294 21.360 ATOM 242 C5 G3 8 35.800 31.588 21.508 ATOM 243 C6 G3 8 36.223 32.285 22.656 ATOM 244 O6 G3 8 36.249 31.867 23.809 ATOM 245 N1 G3 8 36.647 33.570 22.413 ATOM 246 H1 G3 8 36.962 34.112 23.204 ATOM 247 C2 G3 8 36.652 34.112 21.167 ATOM 248 N2 G3 8 37.080 35.375 21.116 ATOM 249 H21 G3 8 37.374 35.843 21.961 ATOM 250 H22 G3 8 37.112 35.861 20.232 ATOM 251 N3 G3 8 36.263 33.495 20.047 ATOM 252 C4 G3 8 35.851 32.236 20.295 ATOM 253 C3' G3 8 36.677 29.362 17.642 ATOM 254 H3' G3 8 36.695 29.043 18.683 ATOM 255 C2' G3 8 36.939 30.867 17.564 ATOM 256 H2'1 G3 8 37.986 31.066 17.793 ATOM 257 H2'2 G3 8 36.713 31.225 16.559 ATOM 258 O3' G3 8 37.644 28.575 16.930 ATOM 259 H3T G3 8 37.356 27.662 16.975